ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal41h07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT019147.1| Zea mays clone Contig802.F mRNA sequence Length = 902 Score = 402 bits (203), Expect = e-109 Identities = 320/359 (89%) Strand = Plus / Plus Query: 239 ttcagaggaattcctgagatttgcgaacaacggtcctcacctttttcttgaactcggccc 298 ||||||| | ||||||||||||||| ||| ||| ||||||||||||||||| ||| Sbjct: 292 ttcagagcatttcctgagatttgcggacacattgccttacctttttcttgaactcatccc 351 Query: 299 tcttttctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactag 358 |||||||||||| ||||| |||||||| ||||| ||||| |||||||| |||||||||| Sbjct: 352 gcttttctctccaatccttggcagcttcgatattcgctggagactcgtcatttggactag 411 Query: 359 agagcatcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgtt 418 ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 412 agagcatcgaaatgatgctcagaactatactttcaaccgtgtgcactggtgtccatcgtt 471 Query: 419 cacttgcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgcaca 478 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 472 cgcttgcaagctcataaccattgggatcttcaccaggtggatgaagaatagaaatgcaaa 531 Query: 479 cacgcccgtcgggatagacatttggatgccacatctcagaagtaaatcttactgaaggag 538 |||| || || ||||| ||||| |||||||||||||||||||||||||||||||| || | Sbjct: 532 cacgtccatcaggataaacattcggatgccacatctcagaagtaaatcttactgatggcg 591 Query: 539 gactgtttgggtaatcctggggaaaggtcattactgcattgaagtagcctccatcatat 597 | ||||| || || | |||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 592 ggctgttgggatagttctgggggaaggtcattattgcattgaagtagcctccatcatat 650
>gb|AF032468.1|AF032468 Zea mays ubiquitin-conjugating enzyme protein E2 (ubc7) mRNA, complete cds Length = 776 Score = 402 bits (203), Expect = e-109 Identities = 320/359 (89%) Strand = Plus / Minus Query: 239 ttcagaggaattcctgagatttgcgaacaacggtcctcacctttttcttgaactcggccc 298 ||||||| | ||||||||||||||| ||| ||| ||||||||||||||||| ||| Sbjct: 531 ttcagagcatttcctgagatttgcggacacattgccttacctttttcttgaactcatccc 472 Query: 299 tcttttctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactag 358 |||||||||||| ||||| |||||||| ||||| ||||| |||||||| |||||||||| Sbjct: 471 gcttttctctccaatccttggcagcttcgatattcgctggagactcgtcatttggactag 412 Query: 359 agagcatcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgtt 418 ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 411 agagcatcgaaatgatgctcagaactatactttcaaccgtgtgcactggtgtccatcgtt 352 Query: 419 cacttgcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgcaca 478 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 351 cgcttgcaagctcataaccattgggatcttcaccaggtggatgaagaatagaaatgcaaa 292 Query: 479 cacgcccgtcgggatagacatttggatgccacatctcagaagtaaatcttactgaaggag 538 |||| || || ||||| ||||| |||||||||||||||||||||||||||||||| || | Sbjct: 291 cacgtccatcaggataaacattcggatgccacatctcagaagtaaatcttactgatggcg 232 Query: 539 gactgtttgggtaatcctggggaaaggtcattactgcattgaagtagcctccatcatat 597 | ||||| || || | |||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 231 ggctgttgggatagttctgggggaaggtcattattgcattgaagtagcctccatcatat 173
>dbj|AK111999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F08, full insert sequence Length = 1037 Score = 371 bits (187), Expect = 2e-99 Identities = 316/359 (88%) Strand = Plus / Minus Query: 238 tttcagaggaattcctgagatttgcgaacaacggtcctcacctttttcttgaactcggcc 297 |||||||| | |||||| ||||| ||||||| | || |||||||||||||| ||| || Sbjct: 631 tttcagagcatttcctgtgatttacgaacaatgcgtctaacctttttcttgaaatcgtcc 572 Query: 298 ctcttttctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggacta 357 |||||||||||||| |||||||| ||||||||||||||||| ||||| || ||||||||| Sbjct: 571 ctcttttctctccaatccttagccgcttcaatatttgctggagactcatcatttggacta 512 Query: 358 gagagcatcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgt 417 |||||||||||||| ||||||||||||||||| ||||| || ||||| || ||||||||| Sbjct: 511 gagagcatcgaaatgatgctcagaactatactttcaactgtatgcacaggtgtccaccgt 452 Query: 418 tcacttgcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgcac 477 || || |||||||||||||| |||||||| || |||||||||||||| ||||||||||| Sbjct: 451 tcgctcgcaagctcataaccgttgggatcttcgccaggtggatgaaggatagaaatgcat 392 Query: 478 acacgcccgtcgggatagacatttggatgccacatctcagaagtaaatcttactgaagga 537 || ||||| || ||||| ||||||||||||||||||||||| ||||| |||||||| || Sbjct: 391 acgcgcccatcaggataaacatttggatgccacatctcagaggtaaaccttactgatggg 332 Query: 538 ggactgtttgggtaatcctggggaaaggtcattactgcattgaagtagcctccatcata 596 ||||| || || |||| |||||| |||||||||| |||||||||||||||||||||||| Sbjct: 331 ggactattcggataattctgggggaaggtcattattgcattgaagtagcctccatcata 273 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 103 gagacaagaccaacatcaccattcgaccgacactga 138 ||||||||||||||||||||| |||| |||||||| Sbjct: 786 gagacaagaccaacatcaccactcgaatgacactga 751
>dbj|AK111857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021F14, full insert sequence Length = 1125 Score = 371 bits (187), Expect = 2e-99 Identities = 316/359 (88%) Strand = Plus / Minus Query: 238 tttcagaggaattcctgagatttgcgaacaacggtcctcacctttttcttgaactcggcc 297 |||||||| | |||||| ||||| ||||||| | || |||||||||||||| ||| || Sbjct: 621 tttcagagcatttcctgtgatttacgaacaatgcgtctaacctttttcttgaaatcgtcc 562 Query: 298 ctcttttctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggacta 357 |||||||||||||| |||||||| ||||||||||||||||| ||||| || ||||||||| Sbjct: 561 ctcttttctctccaatccttagccgcttcaatatttgctggagactcatcatttggacta 502 Query: 358 gagagcatcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgt 417 |||||||||||||| ||||||||||||||||| ||||| || ||||| || ||||||||| Sbjct: 501 gagagcatcgaaatgatgctcagaactatactttcaactgtatgcacaggtgtccaccgt 442 Query: 418 tcacttgcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgcac 477 || || |||||||||||||| |||||||| || |||||||||||||| ||||||||||| Sbjct: 441 tcgctcgcaagctcataaccgttgggatcttcgccaggtggatgaaggatagaaatgcat 382 Query: 478 acacgcccgtcgggatagacatttggatgccacatctcagaagtaaatcttactgaagga 537 || ||||| || ||||| ||||||||||||||||||||||| ||||| |||||||| || Sbjct: 381 acgcgcccatcaggataaacatttggatgccacatctcagaggtaaaccttactgatggg 322 Query: 538 ggactgtttgggtaatcctggggaaaggtcattactgcattgaagtagcctccatcata 596 ||||| || || |||| |||||| |||||||||| |||||||||||||||||||||||| Sbjct: 321 ggactattcggataattctgggggaaggtcattattgcattgaagtagcctccatcata 263 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 103 gagacaagaccaacatcaccattcgaccgacactga 138 ||||||||||||||||||||| |||| |||||||| Sbjct: 776 gagacaagaccaacatcaccactcgaatgacactga 741
>ref|XM_475366.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 510 Score = 367 bits (185), Expect = 3e-98 Identities = 314/357 (87%) Strand = Plus / Minus Query: 240 tcagaggaattcctgagatttgcgaacaacggtcctcacctttttcttgaactcggccct 299 |||||| | |||||| ||||| ||||||| | || |||||||||||||| ||| |||| Sbjct: 510 tcagagcatttcctgtgatttacgaacaatgcgtctaacctttttcttgaaatcgtccct 451 Query: 300 cttttctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactaga 359 |||||||||||| |||||||| ||||||||||||||||| ||||| || ||||||||||| Sbjct: 450 cttttctctccaatccttagccgcttcaatatttgctggagactcatcatttggactaga 391 Query: 360 gagcatcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgttc 419 |||||||||||| ||||||||||||||||| ||||| || ||||| || ||||||||||| Sbjct: 390 gagcatcgaaatgatgctcagaactatactttcaactgtatgcacaggtgtccaccgttc 331 Query: 420 acttgcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgcacac 479 || |||||||||||||| |||||||| || |||||||||||||| ||||||||||| || Sbjct: 330 gctcgcaagctcataaccgttgggatcttcgccaggtggatgaaggatagaaatgcatac 271 Query: 480 acgcccgtcgggatagacatttggatgccacatctcagaagtaaatcttactgaaggagg 539 ||||| || ||||| ||||||||||||||||||||||| ||||| |||||||| || || Sbjct: 270 gcgcccatcaggataaacatttggatgccacatctcagaggtaaaccttactgatggggg 211 Query: 540 actgtttgggtaatcctggggaaaggtcattactgcattgaagtagcctccatcata 596 ||| || || |||| |||||| |||||||||| |||||||||||||||||||||||| Sbjct: 210 actattcggataattctgggggaaggtcattattgcattgaagtagcctccatcata 154
>dbj|AK098861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O01, full insert sequence Length = 912 Score = 363 bits (183), Expect = 4e-97 Identities = 315/359 (87%) Strand = Plus / Minus Query: 238 tttcagaggaattcctgagatttgcgaacaacggtcctcacctttttcttgaactcggcc 297 |||||||| | |||||| ||||| ||||||| | || |||||||||||||| ||| || Sbjct: 632 tttcagagcatttcctgtgatttacgaacaatgcgtctaacctttttcttgaaatcgtcc 573 Query: 298 ctcttttctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggacta 357 |||||||||||||| |||||||| ||||||||||||||||| ||||| || ||||||||| Sbjct: 572 ctcttttctctccaatccttagccgcttcaatatttgctggagactcatcatttggacta 513 Query: 358 gagagcatcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgt 417 |||||||||||||| ||||||||||||||||| ||||| || ||||| || ||||| ||| Sbjct: 512 gagagcatcgaaatgatgctcagaactatactttcaactgtatgcacaggtgtccaacgt 453 Query: 418 tcacttgcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgcac 477 || || |||||||||||||| |||||||| || |||||||||||||| ||||||||||| Sbjct: 452 tcgctcgcaagctcataaccgttgggatcttcgccaggtggatgaaggatagaaatgcat 393 Query: 478 acacgcccgtcgggatagacatttggatgccacatctcagaagtaaatcttactgaagga 537 || ||||| || ||||| ||||||||||||||||||||||| ||||| |||||||| || Sbjct: 392 acgcgcccatcaggataaacatttggatgccacatctcagaggtaaaccttactgatggg 333 Query: 538 ggactgtttgggtaatcctggggaaaggtcattactgcattgaagtagcctccatcata 596 ||||| || || |||| |||||| |||||||||| |||||||||||||||||||||||| Sbjct: 332 ggactattcggataattctgggggaaggtcattattgcattgaagtagcctccatcata 274 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 103 gagacaagaccaacatcaccattcgaccgacactga 138 ||||||||||||||||||||| |||| |||||||| Sbjct: 787 gagacaagaccaacatcaccactcgaatgacactga 752
>ref|NM_190524.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 510 Score = 319 bits (161), Expect = 6e-84 Identities = 281/321 (87%) Strand = Plus / Minus Query: 277 acctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatatttgct 336 |||||||||||||| || ||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 473 acctttttcttgaagtcatccctcttctctctccattccttagctgcttcaatatttgct 414 Query: 337 ggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctcaacc 396 || || || || ||||||| ||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 413 ggtgattcatcatttggaccagaaagcatcgaaatgatgctcagaactatgctctcaacc 354 Query: 397 gtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggt 456 || |||||||| ||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 353 gtatgcactggtgtccaacgctcactcgcaagctcataaccattgggatcatcaccaggc 294 Query: 457 ggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatctca 516 |||||||||||||||||||| ||||| || || ||||| ||||||||||||||||| || Sbjct: 293 ggatgaagaatagaaatgcatacacgtccatccggataaacatttggatgccacatttct 234 Query: 517 gaagtaaatcttactgaaggaggactgtttgggtaatcctggggaaaggtcattactgca 576 || |||||||| || | ||||||||||| || |||| ||| |||||| |||||| |||| Sbjct: 233 gaggtaaatctgacagttggaggactgttaggataattctgtggaaagctcattattgca 174 Query: 577 ttgaagtagcctccatcatat 597 || ||||| |||||||||||| Sbjct: 173 ttaaagtaacctccatcatat 153
>dbj|AK112030.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E11, full insert sequence Length = 1158 Score = 319 bits (161), Expect = 6e-84 Identities = 281/321 (87%) Strand = Plus / Minus Query: 277 acctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatatttgct 336 |||||||||||||| || ||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 714 acctttttcttgaagtcatccctcttctctctccattccttagctgcttcaatatttgct 655 Query: 337 ggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctcaacc 396 || || || || ||||||| ||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 654 ggtgattcatcatttggaccagaaagcatcgaaatgatgctcagaactatgctctcaacc 595 Query: 397 gtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggt 456 || |||||||| ||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 594 gtatgcactggtgtccaacgctcactcgcaagctcataaccattgggatcatcaccaggc 535 Query: 457 ggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatctca 516 |||||||||||||||||||| ||||| || || ||||| ||||||||||||||||| || Sbjct: 534 ggatgaagaatagaaatgcatacacgtccatccggataaacatttggatgccacatttct 475 Query: 517 gaagtaaatcttactgaaggaggactgtttgggtaatcctggggaaaggtcattactgca 576 || |||||||| || | ||||||||||| || |||| ||| |||||| |||||| |||| Sbjct: 474 gaggtaaatctgacagttggaggactgttaggataattctgtggaaagctcattattgca 415 Query: 577 ttgaagtagcctccatcatat 597 || ||||| |||||||||||| Sbjct: 414 ttaaagtaacctccatcatat 394
>dbj|AK104148.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-B05, full insert sequence Length = 1123 Score = 319 bits (161), Expect = 6e-84 Identities = 281/321 (87%) Strand = Plus / Minus Query: 277 acctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatatttgct 336 |||||||||||||| || ||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 626 acctttttcttgaagtcatccctcttctctctccattccttagctgcttcaatatttgct 567 Query: 337 ggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctcaacc 396 || || || || ||||||| ||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 566 ggtgattcatcatttggaccagaaagcatcgaaatgatgctcagaactatgctctcaacc 507 Query: 397 gtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggt 456 || |||||||| ||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 506 gtatgcactggtgtccaacgctcactcgcaagctcataaccattgggatcatcaccaggc 447 Query: 457 ggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatctca 516 |||||||||||||||||||| ||||| || || ||||| ||||||||||||||||| || Sbjct: 446 ggatgaagaatagaaatgcatacacgtccatccggataaacatttggatgccacatttct 387 Query: 517 gaagtaaatcttactgaaggaggactgtttgggtaatcctggggaaaggtcattactgca 576 || |||||||| || | ||||||||||| || |||| ||| |||||| |||||| |||| Sbjct: 386 gaggtaaatctgacagttggaggactgttaggataattctgtggaaagctcattattgca 327 Query: 577 ttgaagtagcctccatcatat 597 || ||||| |||||||||||| Sbjct: 326 ttaaagtaacctccatcatat 306
>dbj|AK099038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135H01, full insert sequence Length = 1111 Score = 319 bits (161), Expect = 6e-84 Identities = 281/321 (87%) Strand = Plus / Minus Query: 277 acctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatatttgct 336 |||||||||||||| || ||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 669 acctttttcttgaagtcatccctcttctctctccattccttagctgcttcaatatttgct 610 Query: 337 ggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctcaacc 396 || || || || ||||||| ||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 609 ggtgattcatcatttggaccagaaagcatcgaaatgatgctcagaactatgctctcaacc 550 Query: 397 gtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggt 456 || |||||||| ||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 549 gtatgcactggtgtccaacgctcactcgcaagctcataaccattgggatcatcaccaggc 490 Query: 457 ggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatctca 516 |||||||||||||||||||| ||||| || || ||||| ||||||||||||||||| || Sbjct: 489 ggatgaagaatagaaatgcatacacgtccatccggataaacatttggatgccacatttct 430 Query: 517 gaagtaaatcttactgaaggaggactgtttgggtaatcctggggaaaggtcattactgca 576 || |||||||| || | ||||||||||| || |||| ||| |||||| |||||| |||| Sbjct: 429 gaggtaaatctgacagttggaggactgttaggataattctgtggaaagctcattattgca 370 Query: 577 ttgaagtagcctccatcatat 597 || ||||| |||||||||||| Sbjct: 369 ttaaagtaacctccatcatat 349
>gb|BT016440.1| Zea mays clone Contig273 mRNA sequence Length = 1135 Score = 280 bits (141), Expect = 5e-72 Identities = 276/321 (85%) Strand = Plus / Minus Query: 277 acctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatatttgct 336 |||||||||||||| || |||||| ||| ||||| |||||||| || ||||| |||||| Sbjct: 717 acctttttcttgaaatcctccctctgttccctccattccttagctgcctcaatgtttgct 658 Query: 337 ggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctcaacc 396 || ||||| || ||||||||||||||||| || ||||||||||||||||| || || || Sbjct: 657 ggagactcatcatttggactagagagcattgatataatgctcagaactatgctttctact 598 Query: 397 gtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggt 456 |||||||| || ||||| || |||||||| ||||||||||| || ||||| ||||||||| Sbjct: 597 gtgtgcacaggtgtccatcgctcacttgctagctcataaccgtttggatcttcaccaggt 538 Query: 457 ggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatctca 516 |||||||||||||| || || || ||||| || ||||||||||||||||||||||| ||| Sbjct: 537 ggatgaagaatagagatacaaacccgcccatcaggatagacatttggatgccacatttca 478 Query: 517 gaagtaaatcttactgaaggaggactgtttgggtaatcctggggaaaggtcattactgca 576 || |||||||| ||||| || || ||||||||||||| || || ||| |||||| |||| Sbjct: 477 gaggtaaatctgactgatggcgggctgtttgggtaattttgtgggaagctcattattgca 418 Query: 577 ttgaagtagcctccatcatat 597 |||||||| |||||||||||| Sbjct: 417 ttgaagtaccctccatcatat 397
>emb|AJ002959.1|ZMAJ2959 Zea mays mRNA for ubiquitin carrier protein UBC7 Length = 780 Score = 280 bits (141), Expect = 5e-72 Identities = 276/321 (85%) Strand = Plus / Minus Query: 277 acctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatatttgct 336 |||||||||||||| || |||||| ||| ||||| |||||||| || ||||| |||||| Sbjct: 552 acctttttcttgaaatcctccctctgttccctccattccttagctgcctcaatgtttgct 493 Query: 337 ggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctcaacc 396 || ||||| || ||||||||||||||||| || ||||||||||||||||| || || || Sbjct: 492 ggagactcatcatttggactagagagcattgatataatgctcagaactatgctttctact 433 Query: 397 gtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggt 456 |||||||| || ||||| || |||||||| ||||||||||| || ||||| ||||||||| Sbjct: 432 gtgtgcacaggtgtccatcgctcacttgcgagctcataaccgtttggatcttcaccaggt 373 Query: 457 ggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatctca 516 |||||||||||||| || || || ||||| || ||||||||||||||||||||||| ||| Sbjct: 372 ggatgaagaatagagatacaaacccgcccatcaggatagacatttggatgccacatttca 313 Query: 517 gaagtaaatcttactgaaggaggactgtttgggtaatcctggggaaaggtcattactgca 576 || |||||||| ||||| || || ||||||||||||| || || ||| |||||| |||| Sbjct: 312 gaggtaaatctgactgatggcgggctgtttgggtaattttgtgggaagctcattattgca 253 Query: 577 ttgaagtagcctccatcatat 597 |||||||| |||||||||||| Sbjct: 252 ttgaagtaccctccatcatat 232
>gb|AY103605.1| Zea mays PCO117734 mRNA sequence Length = 1205 Score = 280 bits (141), Expect = 5e-72 Identities = 276/321 (85%) Strand = Plus / Minus Query: 277 acctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatatttgct 336 |||||||||||||| || |||||| ||| ||||| |||||||| || ||||| |||||| Sbjct: 731 acctttttcttgaaatcctccctctgttccctccattccttagctgcctcaatgtttgct 672 Query: 337 ggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctcaacc 396 || ||||| || ||||||||||||||||| || ||||||||||||||||| || || || Sbjct: 671 ggagactcatcatttggactagagagcattgatataatgctcagaactatgctttctact 612 Query: 397 gtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggt 456 |||||||| || ||||| || |||||||| ||||||||||| || ||||| ||||||||| Sbjct: 611 gtgtgcacaggtgtccatcgctcacttgcgagctcataaccgtttggatcttcaccaggt 552 Query: 457 ggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatctca 516 |||||||||||||| || || || ||||| || ||||||||||||||||||||||| ||| Sbjct: 551 ggatgaagaatagagatacaaacccgcccatcaggatagacatttggatgccacatttca 492 Query: 517 gaagtaaatcttactgaaggaggactgtttgggtaatcctggggaaaggtcattactgca 576 || |||||||| ||||| || || ||||||||||||| || || ||| |||||| |||| Sbjct: 491 gaggtaaatctgactgatggcgggctgtttgggtaattttgtgggaagctcattattgca 432 Query: 577 ttgaagtagcctccatcatat 597 |||||||| |||||||||||| Sbjct: 431 ttgaagtaccctccatcatat 411
>gb|M74077.1|WHTUBICP T.aestivum ubiquitin carrier protein mRNA Length = 802 Score = 228 bits (115), Expect = 2e-56 Identities = 270/321 (84%), Gaps = 3/321 (0%) Strand = Plus / Minus Query: 277 acctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatatttgct 336 ||||| ||||||||||| || ||| ||||||||||||||||| |||||||||||||| Sbjct: 521 accttcttcttgaactcatcctgcttctctctccagtccttagctgcttcaatatttgcc 462 Query: 337 ggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctcaacc 396 || || || || ||||||||||| ||||||||||| ||||| | ||||||||||||||| Sbjct: 461 ggtgattcatcatttggactagaaagcatcgaaatgatgcttaatactatactctcaacc 402 Query: 397 gtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggt 456 || || ||||| ||||| || |||||||| |||||||| || || ||||||||||||||| Sbjct: 401 gtatggactggtgtccaacgctcacttgcgagctcatatccgtttggatcatcaccaggt 342 Query: 457 ggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatctca 516 |||| ||||||||||||| || ||||| || ||||| ||||| ||||||||||| ||| Sbjct: 341 ggat---gaatagaaatgcatacccgcccatctggataaacattaggatgccacatttca 285 Query: 517 gaagtaaatcttactgaaggaggactgtttgggtaatcctggggaaaggtcattactgca 576 ||||| ||||| |||| ||||| ||||| || |||| || || ||| |||| | |||| Sbjct: 284 gaagtgaatctgactgttggagggctgttcggataattttgtgggaagctcataattgca 225 Query: 577 ttgaagtagcctccatcatat 597 ||||| ||||||||||||||| Sbjct: 224 ttgaaatagcctccatcatat 204
>ref|NM_114513.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G46460 mRNA, complete cds Length = 857 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Minus Query: 274 ctcacctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatattt 333 ||||| || ||||||||||| | ||||| |||||||| || |||||||| |||| ||| Sbjct: 604 ctcactttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgttt 545 Query: 334 gctggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctca 393 ||||| || |||||||| |||| ||||||||| || ||||| |||| | ||||||||| Sbjct: 544 gctggagattcgtcgttgggaccagagagcattgatataatactcaacatgatactctca 485 Query: 394 accgtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcacca 453 || ||||| || |||||||| || ||||||||||||||||| ||| | |||||||||||| Sbjct: 484 actgtgtgaacaggcgtccaacgctcacttgcaagctcatatccacttggatcatcacca 425 Query: 454 ggtggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatc 513 || ||||| |||||||| || || || || || |||||||| || || |||||||| || Sbjct: 424 ggaggatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgccaaata 365 Query: 514 tcagaagtaaa 524 || |||||||| Sbjct: 364 tctgaagtaaa 354
>gb|AY094040.1| Arabidopsis thaliana AT3g46460/F18L15_180 mRNA, complete cds Length = 501 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Minus Query: 274 ctcacctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatattt 333 ||||| || ||||||||||| | ||||| |||||||| || |||||||| |||| ||| Sbjct: 467 ctcactttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgttt 408 Query: 334 gctggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctca 393 ||||| || |||||||| |||| ||||||||| || ||||| |||| | ||||||||| Sbjct: 407 gctggagattcgtcgttgggaccagagagcattgatataatactcaacatgatactctca 348 Query: 394 accgtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcacca 453 || ||||| || |||||||| || ||||||||||||||||| ||| | |||||||||||| Sbjct: 347 actgtgtgaacaggcgtccaacgctcacttgcaagctcatatccacttggatcatcacca 288 Query: 454 ggtggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatc 513 || ||||| |||||||| || || || || || |||||||| || || |||||||| || Sbjct: 287 ggaggatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgccaaata 228 Query: 514 tcagaagtaaa 524 || |||||||| Sbjct: 227 tctgaagtaaa 217
>gb|AY050368.1| Arabidopsis thaliana AT3g46460/F18L15_180 mRNA, complete cds Length = 780 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Minus Query: 274 ctcacctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatattt 333 ||||| || ||||||||||| | ||||| |||||||| || |||||||| |||| ||| Sbjct: 604 ctcactttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgttt 545 Query: 334 gctggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctca 393 ||||| || |||||||| |||| ||||||||| || ||||| |||| | ||||||||| Sbjct: 544 gctggagattcgtcgttgggaccagagagcattgatataatactcaacatgatactctca 485 Query: 394 accgtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcacca 453 || ||||| || |||||||| || ||||||||||||||||| ||| | |||||||||||| Sbjct: 484 actgtgtgaacaggcgtccaacgctcacttgcaagctcatatccacttggatcatcacca 425 Query: 454 ggtggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatc 513 || ||||| |||||||| || || || || || |||||||| || || |||||||| || Sbjct: 424 ggaggatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgccaaata 365 Query: 514 tcagaagtaaa 524 || |||||||| Sbjct: 364 tctgaagtaaa 354
>gb|DQ027027.1| Arabidopsis thaliana ubiquitinating enzyme (At3g46460) mRNA, complete cds Length = 501 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Minus Query: 274 ctcacctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatattt 333 ||||| || ||||||||||| | ||||| |||||||| || |||||||| |||| ||| Sbjct: 467 ctcactttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgttt 408 Query: 334 gctggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctca 393 ||||| || |||||||| |||| ||||||||| || ||||| |||| | ||||||||| Sbjct: 407 gctggagattcgtcgttgggaccagagagcattgatataatactcaacatgatactctca 348 Query: 394 accgtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcacca 453 || ||||| || |||||||| || ||||||||||||||||| ||| | |||||||||||| Sbjct: 347 actgtgtgaacaggcgtccaacgctcacttgcaagctcatatccacttggatcatcacca 288 Query: 454 ggtggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatc 513 || ||||| |||||||| || || || || || |||||||| || || |||||||| || Sbjct: 287 ggaggatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgccaaata 228 Query: 514 tcagaagtaaa 524 || |||||||| Sbjct: 227 tctgaagtaaa 217
>gb|AF462205.1| Narcissus pseudonarcissus putative ubiquitin conjugating enzyme mRNA, partial cds Length = 498 Score = 141 bits (71), Expect = 3e-30 Identities = 206/251 (82%) Strand = Plus / Minus Query: 283 ttcttgaactcggccctcttttctctccagtccttagcagcttcaatatttgctggcgac 342 |||||||| ||| ||| | | |||||||| || || || |||||||||||||| || || Sbjct: 251 ttcttgaaatcgtcccgcctatctctccattctttggcggcttcaatatttgcaggagat 192 Query: 343 tcgtcgtttggactagagagcatcgaaataatgctcagaactatactctcaaccgtgtgc 402 || || || ||||| || ||||| || ||||| |||| || || ||||||||||| ||| Sbjct: 191 tcatcattgggactggaaagcatggatataatactcaaaagaatgctctcaaccgtatgc 132 Query: 403 actggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggtggatga 462 || || ||||| |||||||||||||| ||||| ||| | |||||||| ||||||| || Sbjct: 131 acaggtgtccaacgttcacttgcaagttcatagccacttggatcatctccaggtgcgtgc 72 Query: 463 agaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatctcagaagta 522 || || || ||||| |||||||| |||||||| |||||||||||||||||||| || ||| Sbjct: 71 aggattgagatgcaaacacgcccatcgggatacacatttggatgccacatctccgatgta 12 Query: 523 aatcttactga 533 ||||| ||||| Sbjct: 11 aatctaactga 1
>emb|BX842105.1|CNS09YES Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZD06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 840 Score = 141 bits (71), Expect = 3e-30 Identities = 206/251 (82%) Strand = Plus / Minus Query: 274 ctcacctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatattt 333 ||||| || ||||||||||| | ||||| |||||||| || |||||||| |||| ||| Sbjct: 587 ctcactttcttcttgaactcatctctcttctctctccattctttagcagcctcaacgttt 528 Query: 334 gctggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctca 393 ||||| || |||||||| |||| ||||||||| || ||||| |||| | ||||||||| Sbjct: 527 gctggagattcgtcgttgggaccagagagcattgatataatactcaacatgatactctca 468 Query: 394 accgtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcacca 453 || ||||| || |||||||| || | ||||||||||||||| ||| | |||||||||||| Sbjct: 467 actgtgtgaacaggcgtccaacgctgacttgcaagctcatatccacttggatcatcacca 408 Query: 454 ggtggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatc 513 || ||||| |||||||| || || || || || |||||||| || || |||||||| || Sbjct: 407 ggaggatgtagaatagatatacaaacgcggccatcgggataaacgttaggatgccaaata 348 Query: 514 tcagaagtaaa 524 || |||||||| Sbjct: 347 tctgaagtaaa 337
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 394 accgtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcacca 453 ||||| |||||||| ||||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 36012319 accgtatgcactggtgtccaacgctcactcgcaagctcataaccattgggatcatcacca 36012378 Query: 454 ggtggatgaagaatagaaatgcacacacg 482 || |||||||||||||||||||| ||||| Sbjct: 36012379 ggcggatgaagaatagaaatgcatacacg 36012407 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 322 gcttcaatatttgctggcgactcgtcgtttggactagagagcatcgaaataatgctcaga 381 ||||||||||||||||| || || || ||||||| ||| ||||||||||| ||||||||| Sbjct: 36011445 gcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatgatgctcaga 36011504 Query: 382 actatactctcaacc 396 ||||| ||||||||| Sbjct: 36011505 actatgctctcaacc 36011519 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 497 catttggatgccacatctcagaagtaaatcttactgaaggaggactgtttgggtaatcct 556 |||||||||||||||| || || |||||||| || | ||||||||||| || |||| || Sbjct: 36012506 catttggatgccacatttctgaggtaaatctgacagttggaggactgttaggataattct 36012565 Query: 557 ggggaaaggtcattactgcattgaagtagcctccatca 594 | |||||| |||||| |||||| ||||| ||||||||| Sbjct: 36012566 gtggaaagctcattattgcattaaagtaacctccatca 36012603 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 277 acctttttcttgaactcggccctcttttctctccagtcctt 317 |||||||||||||| || ||||||| |||||||| ||||| Sbjct: 36010961 acctttttcttgaagtcatccctcttctctctccattcctt 36011001
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 394 accgtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcacca 453 ||||| |||||||| ||||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 25044 accgtatgcactggtgtccaacgctcactcgcaagctcataaccattgggatcatcacca 25103 Query: 454 ggtggatgaagaatagaaatgcacacacg 482 || |||||||||||||||||||| ||||| Sbjct: 25104 ggcggatgaagaatagaaatgcatacacg 25132 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 322 gcttcaatatttgctggcgactcgtcgtttggactagagagcatcgaaataatgctcaga 381 ||||||||||||||||| || || || ||||||| ||| ||||||||||| ||||||||| Sbjct: 24170 gcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatgatgctcaga 24229 Query: 382 actatactctcaacc 396 ||||| ||||||||| Sbjct: 24230 actatgctctcaacc 24244 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 497 catttggatgccacatctcagaagtaaatcttactgaaggaggactgtttgggtaatcct 556 |||||||||||||||| || || |||||||| || | ||||||||||| || |||| || Sbjct: 25231 catttggatgccacatttctgaggtaaatctgacagttggaggactgttaggataattct 25290 Query: 557 ggggaaaggtcattactgcattgaagtagcctccatca 594 | |||||| |||||| |||||| ||||| ||||||||| Sbjct: 25291 gtggaaagctcattattgcattaaagtaacctccatca 25328 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 277 acctttttcttgaactcggccctcttttctctccagtcctt 317 |||||||||||||| || ||||||| |||||||| ||||| Sbjct: 23686 acctttttcttgaagtcatccctcttctctctccattcctt 23726
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 394 accgtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcacca 453 ||||| |||||||| ||||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 110997 accgtatgcactggtgtccaacgctcactcgcaagctcataaccattgggatcatcacca 111056 Query: 454 ggtggatgaagaatagaaatgcacacacg 482 || |||||||||||||||||||| ||||| Sbjct: 111057 ggcggatgaagaatagaaatgcatacacg 111085 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 322 gcttcaatatttgctggcgactcgtcgtttggactagagagcatcgaaataatgctcaga 381 ||||||||||||||||| || || || ||||||| ||| ||||||||||| ||||||||| Sbjct: 110123 gcttcaatatttgctggtgattcatcatttggaccagaaagcatcgaaatgatgctcaga 110182 Query: 382 actatactctcaacc 396 ||||| ||||||||| Sbjct: 110183 actatgctctcaacc 110197 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 497 catttggatgccacatctcagaagtaaatcttactgaaggaggactgtttgggtaatcct 556 |||||||||||||||| || || |||||||| || | ||||||||||| || |||| || Sbjct: 111184 catttggatgccacatttctgaggtaaatctgacagttggaggactgttaggataattct 111243 Query: 557 ggggaaaggtcattactgcattgaagtagcctccatca 594 | |||||| |||||| |||||| ||||| ||||||||| Sbjct: 111244 gtggaaagctcattattgcattaaagtaacctccatca 111281 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 277 acctttttcttgaactcggccctcttttctctccagtcctt 317 |||||||||||||| || ||||||| |||||||| ||||| Sbjct: 109639 acctttttcttgaagtcatccctcttctctctccattcctt 109679
>ref|NM_125320.1| Arabidopsis thaliana UBC7; ubiquitin conjugating enzyme AT5G59300 (UBC7) mRNA, complete cds Length = 597 Score = 117 bits (59), Expect = 4e-23 Identities = 203/251 (80%) Strand = Plus / Minus Query: 274 ctcacctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatattt 333 ||||| || ||||||||||| | ||||| |||| ||| || || |||||||||| |||| Sbjct: 563 ctcactttcttcttgaactcatctctcttatctcgccattctttggcagcttcaacattt 504 Query: 334 gctggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctca 393 ||||| ||||| ||||| |||| ||| ||||| || || || |||| | ||||||||| Sbjct: 503 gctggagactcatcgttaggaccagaaagcattgatatgatactcaacataatactctca 444 Query: 394 accgtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcacca 453 || || || || || ||||| || || ||||||||||||||||| | ||||||||||| Sbjct: 443 actgtatgaacaggagtccaacgctcgcttgcaagctcataaccgctaggatcatcaccg 384 Query: 454 ggtggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatc 513 || |||||||||||||| ||||| ||||| || || | ||| || || ||||||||||| Sbjct: 383 ggaggatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccacata 324 Query: 514 tcagaagtaaa 524 || |||||||| Sbjct: 323 tccgaagtaaa 313
>gb|AY080733.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC7 (At5g59300) mRNA, partial cds Length = 852 Score = 117 bits (59), Expect = 4e-23 Identities = 203/251 (80%) Strand = Plus / Minus Query: 274 ctcacctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatattt 333 ||||| || ||||||||||| | ||||| |||| ||| || || |||||||||| |||| Sbjct: 531 ctcactttcttcttgaactcatctctcttatctcgccattctttggcagcttcaacattt 472 Query: 334 gctggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctca 393 ||||| ||||| ||||| |||| ||| ||||| || || || |||| | ||||||||| Sbjct: 471 gctggagactcatcgttaggaccagaaagcattgatatgatactcaacataatactctca 412 Query: 394 accgtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcacca 453 || || || || || ||||| || || ||||||||||||||||| | ||||||||||| Sbjct: 411 actgtatgaacaggagtccaacgctcgcttgcaagctcataaccgctaggatcatcaccg 352 Query: 454 ggtggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatc 513 || |||||||||||||| ||||| ||||| || || | ||| || || ||||||||||| Sbjct: 351 ggaggatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccacata 292 Query: 514 tcagaagtaaa 524 || |||||||| Sbjct: 291 tccgaagtaaa 281
>emb|BX833817.1|CNS0A23A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL78ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 740 Score = 117 bits (59), Expect = 4e-23 Identities = 203/251 (80%) Strand = Plus / Minus Query: 274 ctcacctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatattt 333 ||||| || ||||||||||| | ||||| |||| ||| || || |||||||||| |||| Sbjct: 489 ctcactttcttcttgaactcatctctcttatctcgccattctttggcagcttcaacattt 430 Query: 334 gctggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctca 393 ||||| ||||| ||||| |||| ||| ||||| || || || |||| | ||||||||| Sbjct: 429 gctggagactcatcgttaggaccagaaagcattgatatgatactcaacataatactctca 370 Query: 394 accgtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcacca 453 || || || || || ||||| || || ||||||||||||||||| | ||||||||||| Sbjct: 369 actgtatgaacaggagtccaacgctcgcttgcaagctcataaccgctaggatcatcaccg 310 Query: 454 ggtggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatc 513 || |||||||||||||| ||||| ||||| || || | ||| || || ||||||||||| Sbjct: 309 ggaggatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccacata 250 Query: 514 tcagaagtaaa 524 || |||||||| Sbjct: 249 tccgaagtaaa 239
>gb|BT005798.1| Arabidopsis thaliana clone C105469 putative E2, ubiquitin-conjugating enzyme UBC7 (At5g59300) mRNA, complete cds Length = 643 Score = 117 bits (59), Expect = 4e-23 Identities = 203/251 (80%) Strand = Plus / Minus Query: 274 ctcacctttttcttgaactcggccctcttttctctccagtccttagcagcttcaatattt 333 ||||| || ||||||||||| | ||||| |||| ||| || || |||||||||| |||| Sbjct: 578 ctcactttcttcttgaactcatctctcttatctcgccattctttggcagcttcaacattt 519 Query: 334 gctggcgactcgtcgtttggactagagagcatcgaaataatgctcagaactatactctca 393 ||||| ||||| ||||| |||| ||| ||||| || || || |||| | ||||||||| Sbjct: 518 gctggagactcatcgttaggaccagaaagcattgatatgatactcaacataatactctca 459 Query: 394 accgtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcacca 453 || || || || || ||||| || || ||||||||||||||||| | ||||||||||| Sbjct: 458 actgtatgaacaggagtccaacgctcgcttgcaagctcataaccgctaggatcatcaccg 399 Query: 454 ggtggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatc 513 || |||||||||||||| ||||| ||||| || || | ||| || || ||||||||||| Sbjct: 398 ggaggatgaagaatagatatgcaaacacgaccatcagaataaacgttaggatgccacata 339 Query: 514 tcagaagtaaa 524 || |||||||| Sbjct: 338 tccgaagtaaa 328
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 497 catttggatgccacatctcagaagtaaatcttactgaaggaggactgtttgggtaatcct 556 |||||||||||||||||||||| ||||| |||||||| || ||||| || || |||| || Sbjct: 62765 catttggatgccacatctcagaggtaaaccttactgatgggggactattcggataattct 62706 Query: 557 ggggaaaggtcattactgcattgaagtagcctccatca 594 |||| |||||||||| |||||||||||||||||||||| Sbjct: 62705 gggggaaggtcattattgcattgaagtagcctccatca 62668 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Minus Query: 322 gcttcaatatttgctggcgactcgtcgtttggactagagagcatcgaaataatgctcaga 381 ||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 63532 gcttcaatatttgctggagactcatcatttggactagagagcatcgaaatgatgctcaga 63473 Query: 382 actatactctcaacc 396 |||||||| |||||| Sbjct: 63472 actatactttcaacc 63458 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 400 tgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggtgga 459 ||||| || ||||||||||| || |||||||||||||| |||||||| || ||||||||| Sbjct: 62933 tgcacaggtgtccaccgttcgctcgcaagctcataaccgttgggatcttcgccaggtgga 62874 Query: 460 tgaagaatagaaatgcacacacgcccgtcgggata 494 ||||| ||||||||||| || ||||| || ||||| Sbjct: 62873 tgaaggatagaaatgcatacgcgcccatcaggata 62839 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 238 tttcagaggaattcctgagatttgcgaacaacggtcctcacctttttcttgaactcggcc 297 |||||||| | |||||| ||||| ||||||| | || |||||||||||||| ||| || Sbjct: 64064 tttcagagcatttcctgtgatttacgaacaatgcgtctaacctttttcttgaaatcgtcc 64005 Query: 298 ctcttttctctccagtcctt 317 |||||||||||||| ||||| Sbjct: 64004 ctcttttctctccaatcctt 63985 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 103 gagacaagaccaacatcaccattcgaccgacactga 138 ||||||||||||||||||||| |||| |||||||| Sbjct: 64219 gagacaagaccaacatcaccactcgaatgacactga 64184
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 497 catttggatgccacatctcagaagtaaatcttactgaaggaggactgtttgggtaatcct 556 |||||||||||||||||||||| ||||| |||||||| || ||||| || || |||| || Sbjct: 22473358 catttggatgccacatctcagaggtaaaccttactgatgggggactattcggataattct 22473299 Query: 557 ggggaaaggtcattactgcattgaagtagcctccatca 594 |||| |||||||||| |||||||||||||||||||||| Sbjct: 22473298 gggggaaggtcattattgcattgaagtagcctccatca 22473261 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Minus Query: 322 gcttcaatatttgctggcgactcgtcgtttggactagagagcatcgaaataatgctcaga 381 ||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 22474125 gcttcaatatttgctggagactcatcatttggactagagagcatcgaaatgatgctcaga 22474066 Query: 382 actatactctcaacc 396 |||||||| |||||| Sbjct: 22474065 actatactttcaacc 22474051 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 400 tgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggtgga 459 ||||| || ||||||||||| || |||||||||||||| |||||||| || ||||||||| Sbjct: 22473526 tgcacaggtgtccaccgttcgctcgcaagctcataaccgttgggatcttcgccaggtgga 22473467 Query: 460 tgaagaatagaaatgcacacacgcccgtcgggata 494 ||||| ||||||||||| || ||||| || ||||| Sbjct: 22473466 tgaaggatagaaatgcatacgcgcccatcaggata 22473432 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 238 tttcagaggaattcctgagatttgcgaacaacggtcctcacctttttcttgaactcggcc 297 |||||||| | |||||| ||||| ||||||| | || |||||||||||||| ||| || Sbjct: 22474657 tttcagagcatttcctgtgatttacgaacaatgcgtctaacctttttcttgaaatcgtcc 22474598 Query: 298 ctcttttctctccagtcctt 317 |||||||||||||| ||||| Sbjct: 22474597 ctcttttctctccaatcctt 22474578 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 103 gagacaagaccaacatcaccattcgaccgacactga 138 ||||||||||||||||||||| |||| |||||||| Sbjct: 22474812 gagacaagaccaacatcaccactcgaatgacactga 22474777
>emb|BX825758.1|CNS0A66U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZE06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 799 Score = 115 bits (58), Expect = 2e-22 Identities = 196/242 (80%) Strand = Plus / Minus Query: 283 ttcttgaactcggccctcttttctctccagtccttagcagcttcaatatttgctggcgac 342 ||||||||||| | ||||| |||||||| || |||||||| |||| |||||||| || Sbjct: 583 ttcttgaactcatctctcttctctctccattctttagcagcctcaacgtttgctggagat 524 Query: 343 tcgtcgtttggactagagagcatcgaaataatgctcagaactatactctcaaccgtgtgc 402 |||||||| |||| ||| ||||| || ||||| |||| | ||||||||||| || | Sbjct: 523 tcgtcgttgggaccagaaagcattgatataatactcaacatgatactctcaactgtttta 464 Query: 403 actggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggtggatga 462 || |||||||| || ||| ||||||||||||| ||| | |||||||||||||| ||||| Sbjct: 463 acaggcgtccaacgctcatttgcaagctcatatccacttggatcatcaccaggaggatgt 404 Query: 463 agaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatctcagaagta 522 |||||||| || || || || || |||||||| || || |||||||| || || |||||| Sbjct: 403 agaatagatatacaaacgcggccatcgggataaacgttaggatgccaaatatctgaagta 344 Query: 523 aa 524 || Sbjct: 343 aa 342
>dbj|AK102646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100I12, full insert sequence Length = 2666 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Minus Query: 238 tttcagaggaattcctgagatttgcgaacaacggtcctcacctttttcttgaactcggcc 297 |||||||| | |||||| ||||| ||||||| | || |||||||||||||| ||| || Sbjct: 2368 tttcagagcatttcctgtgatttacgaacaatgcgtctaacctttttcttgaaatcgtcc 2309 Query: 298 ctcttttctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggact 356 |||||||||||||| |||||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 2308 ctcttttctctccaatccttagccgcttcaatatttgctggagactcatcatttggact 2250 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 103 gagacaagaccaacatcaccattcgaccgacactga 138 ||||||||||||||||||||| |||| |||||||| Sbjct: 2523 gagacaagaccaacatcaccactcgaatgacactga 2488
>emb|BX833254.1|CNS0A238 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 816 Score = 99.6 bits (50), Expect = 1e-17 Identities = 194/242 (80%) Strand = Plus / Minus Query: 283 ttcttgaactcggccctcttttctctccagtccttagcagcttcaatatttgctggcgac 342 ||||||||||| | |||| |||| ||| || || |||||||||| ||||||||| ||| Sbjct: 520 ttcttgaactcatctctctcatctcgccattctttggcagcttcaacatttgctggagac 461 Query: 343 tcgtcgtttggactagagagcatcgaaataatgctcagaactatactctcaaccgtgtgc 402 || ||||| |||| ||| ||||| || || || |||| | ||||||||||| || || Sbjct: 460 tcatcgttaggaccagaaagcattgatatgatactcaacataatactctcaactgtatga 401 Query: 403 actggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggtggatga 462 || || || || || || ||||||||||||||||| | ||||||||||| || |||||| Sbjct: 400 acaggagttcaacgctcgcttgcaagctcataaccgctaggatcatcaccgggaggatga 341 Query: 463 agaatagaaatgcacacacgcccgtcgggatagacatttggatgccacatctcagaagta 522 |||||||| ||||| ||||| || || | ||| || || ||||||||||| || |||||| Sbjct: 340 agaatagatatgcaaacacgaccatcagaataaacgttaggatgccacatatccgaagta 281 Query: 523 aa 524 || Sbjct: 280 aa 279
>ref|NM_115396.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G55380 mRNA, complete cds Length = 883 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Minus Query: 304 tctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactagagagc 363 |||||||| ||||| |||||||| | ||| ||||| ||||| ||||| |||| |||||| Sbjct: 541 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 482 Query: 364 atcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgttcactt 423 ||||| || || |||| || || || || ||||| || || || ||||| |||||| Sbjct: 481 atcgatatgatactcaacacaatgctttctaccgtatggacaggggtccaacgttcagag 422 Query: 424 gcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgca 476 |||||||| || |||| |||||||||||||| |||||||||||||||||||| Sbjct: 421 gcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 369
>gb|AY117262.1| Arabidopsis thaliana putative E2 ubiquitin-conjugating enzyme UBC14 (At3g55380) mRNA, complete cds Length = 535 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Minus Query: 304 tctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactagagagc 363 |||||||| ||||| |||||||| | ||| ||||| ||||| ||||| |||| |||||| Sbjct: 440 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 381 Query: 364 atcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgttcactt 423 ||||| || || |||| || || || || ||||| || || || ||||| |||||| Sbjct: 380 atcgatatgatactcaacacaatgctttctaccgtatggacaggggtccaacgttcagag 321 Query: 424 gcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgca 476 |||||||| || |||| |||||||||||||| |||||||||||||||||||| Sbjct: 320 gcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 268
>emb|X72625.1|ATUCEE2A A.thaliana UbcAT3 mRNA for ubiquitin conjugating enzyme E2 Length = 887 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Minus Query: 304 tctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactagagagc 363 |||||||| ||||| |||||||| | ||| ||||| ||||| ||||| |||| |||||| Sbjct: 535 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 476 Query: 364 atcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgttcactt 423 ||||| || || |||| || || || || ||||| || || || ||||| |||||| Sbjct: 475 atcgatatgatactcaacacaatgctttctaccgtatggacaggggtccaacgttcagag 416 Query: 424 gcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgca 476 |||||||| || |||| |||||||||||||| |||||||||||||||||||| Sbjct: 415 gcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 363
>gb|AY045883.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC14 (At3g55380) mRNA, complete cds Length = 898 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Minus Query: 304 tctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactagagagc 363 |||||||| ||||| |||||||| | ||| ||||| ||||| ||||| |||| |||||| Sbjct: 549 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 490 Query: 364 atcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgttcactt 423 ||||| || || |||| || || || || ||||| || || || ||||| |||||| Sbjct: 489 atcgatatgatactcaacacaatgctttctaccgtatggacaggggtccaacgttcagag 430 Query: 424 gcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgca 476 |||||||| || |||| |||||||||||||| |||||||||||||||||||| Sbjct: 429 gcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 377
>emb|BX825254.1|CNS0A53C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL23ZB03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 842 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Minus Query: 304 tctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactagagagc 363 |||||||| ||||| |||||||| | ||| ||||| ||||| ||||| |||| |||||| Sbjct: 520 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 461 Query: 364 atcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgttcactt 423 ||||| || || |||| || || || || ||||| || || || ||||| |||||| Sbjct: 460 atcgatatgatactcaacacaatgctttctaccgtatggacaggggtccaacgttcagag 401 Query: 424 gcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgca 476 |||||||| || |||| |||||||||||||| |||||||||||||||||||| Sbjct: 400 gcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 348
>gb|AY086490.1| Arabidopsis thaliana clone 25382 mRNA, complete sequence Length = 785 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Minus Query: 304 tctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactagagagc 363 |||||||| ||||| |||||||| | ||| ||||| ||||| ||||| |||| |||||| Sbjct: 465 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 406 Query: 364 atcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgttcactt 423 ||||| || || |||| || || || || ||||| || || || ||||| |||||| Sbjct: 405 atcgatatgatactcaacacaatgctttctaccgtatggacaggggtccaacgttcagag 346 Query: 424 gcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgca 476 |||||||| || |||| |||||||||||||| |||||||||||||||||||| Sbjct: 345 gcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 293
>gb|DQ027028.1| Arabidopsis thaliana ubiquitinating enzyme (At3g55380) mRNA, complete cds Length = 504 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Minus Query: 304 tctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactagagagc 363 |||||||| ||||| |||||||| | ||| ||||| ||||| ||||| |||| |||||| Sbjct: 440 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 381 Query: 364 atcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgttcactt 423 ||||| || || |||| || || || || ||||| || || || ||||| |||||| Sbjct: 380 atcgatatgatactcaacacaatgctttctaccgtatggacaggggtccaacgttcagag 321 Query: 424 gcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgca 476 |||||||| || |||| |||||||||||||| |||||||||||||||||||| Sbjct: 320 gcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 268
>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15 Length = 100328 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 397 gtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggt 456 ||||| || |||||||| || ||||||||||||||||| ||| | |||||||||||||| Sbjct: 82702 gtgtgaacaggcgtccaacgctcacttgcaagctcatatccacttggatcatcaccagga 82761 Query: 457 ggatgaagaataga 470 ||||| |||||||| Sbjct: 82762 ggatgtagaataga 82775
>gb|U33758.1|ATU33758 Arabidopsis ubiquitin conjugating enzyme E2 (UBC13) gene, complete cds Length = 2209 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 397 gtgtgcactggcgtccaccgttcacttgcaagctcataaccattgggatcatcaccaggt 456 ||||| || |||||||| || ||||||||||||||||| ||| | |||||||||||||| Sbjct: 1153 gtgtgaacaggcgtccaacgctcacttgcaagctcatatccacttggatcatcaccagga 1094 Query: 457 ggatgaagaataga 470 ||||| |||||||| Sbjct: 1093 ggatgtagaataga 1080 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 318 agcagcttcaatatttgctggcgactcgtcgtttggactagagagcatcgaaataatgct 377 |||||| |||| |||||||| || |||||||| |||| ||||||||| || ||||| || Sbjct: 1347 agcagcctcaacgtttgctggagattcgtcgttgggaccagagagcattgatataatact 1288 Query: 378 cagaactatactctcaacc 396 || | |||||||||||| Sbjct: 1287 caacatgatactctcaacc 1269
>ref|XM_824383.1| Trypanosoma brucei TREU927 ubiquitin-conjugating enzyme E2 (Tb11.01.5790) partial mRNA Length = 744 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 454 ggtggatgaagaatagaaatgcacacacgcccgtcgggatagacatttggatgcca 509 ||||||||||||||||||||||||||||| || |||||||| ||||| || ||||| Sbjct: 272 ggtggatgaagaatagaaatgcacacacgaccatcgggataaacattcgggtgcca 217
>gb|DQ284455.1| Solanum tuberosum clone 007A03 putative E2 ubiquitin-conjugating protein UBC7-like mRNA, complete cds Length = 783 Score = 71.9 bits (36), Expect = 2e-09 Identities = 141/176 (80%) Strand = Plus / Minus Query: 301 ttttctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactagag 360 ||||| ||||| |||||||||||||| | || || || ||||| || || || || || Sbjct: 507 ttttccctccattccttagcagcttccacgttagcaggagactcatcattagggcttgaa 448 Query: 361 agcatcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgttca 420 ||||| || || ||||| | || ||||||||| |||||||| || || | ||| || ||| Sbjct: 447 agcatggatatgatgcttaaaattatactctccaccgtgtggacaggagaccaacgctca 388 Query: 421 cttgcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgca 476 || ||| |||||| ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 387 ctagcatactcatagccatttggatcatcaccaggtgggtgaagaattgagatgca 332
>dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC17 Length = 75803 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 421 cttgcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgcacaca 480 ||||||||||||||||| | ||||||||||| || |||||||||||||| ||||| ||| Sbjct: 59570 cttgcaagctcataaccgctaggatcatcaccgggaggatgaagaatagatatgcaaaca 59629 Query: 481 cg 482 || Sbjct: 59630 cg 59631
>gb|U33757.1|ATU33757 Arabidopsis thaliana ubiquitin conjugating enzyme E2 (UBC7) gene, complete cds Length = 2705 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 421 cttgcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgcacaca 480 ||||||||||||||||| | ||||||||||| || |||||||||||||| ||||| ||| Sbjct: 1564 cttgcaagctcataaccgctaggatcatcaccgggaggatgaagaatagatatgcaaaca 1505 Query: 481 cg 482 || Sbjct: 1504 cg 1503
>gb|U33759.1|ATU33759 Arabidopsis ubiquitin conjugating enzyme E2 (UBC14) gene, complete cds Length = 2107 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 424 gcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgca 476 |||||||| || |||| |||||||||||||| |||||||||||||||||||| Sbjct: 1086 gcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 1034 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 304 tctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactagagagc 363 |||||||| ||||| |||||||| | ||| ||||| ||||| ||||| |||| |||||| Sbjct: 1624 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 1565 Query: 364 atcga 368 ||||| Sbjct: 1564 atcga 1560
>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16 Length = 103240 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 424 gcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgca 476 |||||||| || |||| |||||||||||||| |||||||||||||||||||| Sbjct: 14767 gcaagctcgtatccatgaggatcatcaccaggaggatgaagaatagaaatgca 14715 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 304 tctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactagagagc 363 |||||||| ||||| |||||||| | ||| ||||| ||||| ||||| |||| |||||| Sbjct: 15305 tctctccattcctttgcagcttccacattcgctggtgactcatcgttgggacctgagagc 15246 Query: 364 atcga 368 ||||| Sbjct: 15245 atcga 15241
>gb|DQ284482.1| Solanum tuberosum clone 178D03 ubiquitin-conjugating protein 13-like mRNA, complete cds Length = 820 Score = 63.9 bits (32), Expect = 6e-07 Identities = 140/176 (79%) Strand = Plus / Minus Query: 301 ttttctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactagag 360 ||||| ||||| |||||||||||||| | || || || ||||| || || || || || Sbjct: 525 ttttccctccattccttagcagcttccacgttagcaggagactcatcattagggcttgaa 466 Query: 361 agcatcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgttca 420 ||||| || || ||||| | || ||||||||| |||||||| || || | ||| || ||| Sbjct: 465 agcatggatatgatgcttaaaattatactctccaccgtgtggacaggagaccaacgctca 406 Query: 421 cttgcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgca 476 || ||| |||||| ||||| |||||||||||||| || |||||||| || ||||| Sbjct: 405 ctagcatactcatagccatttggatcatcaccaggagggtgaagaattgagatgca 350
>gb|DQ252513.1| Solanum tuberosum clone 089D04 ubiquitin-conjugating enzyme E2 7-like mRNA, complete cds Length = 807 Score = 63.9 bits (32), Expect = 6e-07 Identities = 140/176 (79%) Strand = Plus / Minus Query: 301 ttttctctccagtccttagcagcttcaatatttgctggcgactcgtcgtttggactagag 360 ||||| ||||| |||||||||||||| | || || || ||||| || || || || || Sbjct: 527 ttttccctccattccttagcagcttccacgttagcaggagactcatcattagggcttgaa 468 Query: 361 agcatcgaaataatgctcagaactatactctcaaccgtgtgcactggcgtccaccgttca 420 ||||| || || ||||| | || ||||||||| |||||||| || || | ||| || ||| Sbjct: 467 agcatggatatgatgcttaaaattatactctccaccgtgtggacaggagaccaacgctca 408 Query: 421 cttgcaagctcataaccattgggatcatcaccaggtggatgaagaatagaaatgca 476 || ||| |||||| ||||| |||||||||||||| || |||||||| || ||||| Sbjct: 407 ctagcatactcatagccatttggatcatcaccaggagggtgaagaattgagatgca 352
>ref|XM_742845.1| Aspergillus fumigatus Af293 ubiquitin conjugating enzyme UbcH (Afu5g04060) partial mRNA Length = 501 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 442 ggatcatcaccaggtggatgaagaatagaaatgcacacacgcccgtcgggatagacattt 501 ||||||||||| || ||||||||||| || ||||| ||| |||| |||||||||||| Sbjct: 302 ggatcatcaccgggaggatgaagaatggatatgcagacagttccgttgggatagacattc 243 Query: 502 ggatgccaca 511 |||||||||| Sbjct: 242 ggatgccaca 233
>ref|XM_640423.1| Dictyostelium discoideum hypothetical protein (DDB0168503), partial mRNA Length = 516 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 316 ttagcagcttcaatatttgctggcgactcgtcgtttgg 353 |||||||| || ||||||||||| |||||||||||||| Sbjct: 443 ttagcagcatcgatatttgctggtgactcgtcgtttgg 406
>gb|AC117072.3| Dictyostelium discoideum chromosome 2 map 3879572-4071762 strain AX4, complete sequence Length = 192187 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 316 ttagcagcttcaatatttgctggcgactcgtcgtttgg 353 |||||||| || ||||||||||| |||||||||||||| Sbjct: 158328 ttagcagcatcgatatttgctggtgactcgtcgtttgg 158291
>ref|XM_511281.1| PREDICTED: Pan troglodytes similar to ankyrin repeat and FYVE domain containing 1 isoform 1; ankyrin repeat hooked to zinc finger motif (LOC454444), mRNA Length = 1582 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 450 atgaagaatagaaatgcacaca 429
>ref|NM_003342.4| Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) (UBE2G1), transcript variant 1, mRNA Length = 4208 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 643 atgaagaatagaaatgcacaca 622
>gb|BC026288.1| Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans), transcript variant 1, mRNA (cDNA clone MGC:23926 IMAGE:4806647), complete cds Length = 2430 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 451 atgaagaatagaaatgcacaca 430
>gb|BT008255.1| Synthetic construct Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) mRNA, partial cds Length = 513 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 285 atgaagaatagaaatgcacaca 264
>gb|BT007416.1| Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) mRNA, complete cds Length = 513 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 285 atgaagaatagaaatgcacaca 264
>gb|AC087742.9| Homo sapiens chromosome 17, clone RP11-104O19, complete sequence Length = 168834 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 30499 atgaagaatagaaatgcacaca 30478
>emb|CR623407.1| full-length cDNA clone CS0DC020YA09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1927 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 591 atgaagaatagaaatgcacaca 570
>emb|CR622319.1| full-length cDNA clone CS0DC006YD05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1734 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 383 atgaagaatagaaatgcacaca 362
>dbj|AB169404.1| Macaca fascicularis testis cDNA, clone: QtsA-19729, similar to human ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C.elegans) (UBE2G1), transcript variant 1, mRNA, RefSeq: NM_003342.3 Length = 1888 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 474 atgaagaatagaaatgcacaca 453
>gb|AY892103.1| Synthetic construct Homo sapiens clone FLH026045.01L ubiquitin-conjugating enzyme E2G 1 (UBE2G1) mRNA, partial cds Length = 513 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 285 atgaagaatagaaatgcacaca 264
>gb|AY892102.1| Synthetic construct Homo sapiens clone FLH026044.01L ubiquitin-conjugating enzyme E2G 1 (UBE2G1) mRNA, partial cds Length = 513 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 285 atgaagaatagaaatgcacaca 264
>gb|AY889645.1| Synthetic construct Homo sapiens clone FLH026049.01X ubiquitin-conjugating enzyme E2G 1 (UBE2G1) mRNA, complete cds Length = 513 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 285 atgaagaatagaaatgcacaca 264
>gb|AY889644.1| Synthetic construct Homo sapiens clone FLH026048.01X ubiquitin-conjugating enzyme E2G 1 (UBE2G1) mRNA, complete cds Length = 513 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 285 atgaagaatagaaatgcacaca 264
>gb|AY610214.1| Sus scrofa clone Clu_9846.scr.msk.p1.Contig3, mRNA sequence Length = 1984 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 609 atgaagaatagaaatgcacaca 588
>gb|BC002775.2| Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast), transcript variant 1, mRNA (cDNA clone MGC:3733 IMAGE:3619626), complete cds Length = 1318 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 542 atgaagaatagaaatgcacaca 521
>dbj|D78514.1| Homo sapiens mRNA for ubiquitin-conjugating enzyme, complete cds Length = 617 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 459 atgaagaatagaaatgcacaca 480 |||||||||||||||||||||| Sbjct: 303 atgaagaatagaaatgcacaca 282
>ref|XM_424727.1| PREDICTED: Gallus gallus similar to ubiquitin-conjugating enzyme E2-32k (LOC427134), mRNA Length = 880 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 452 caggtggatgaagaatagaaatgcacaca 480 |||||||||||||||| ||||| |||||| Sbjct: 136 caggtggatgaagaatggaaatacacaca 108
>ref|XM_618072.2| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2R 2, transcript variant 1 (LOC537885), mRNA Length = 1269 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 452 caggtggatgaagaatagaaatgca 476 |||||||||||||||| |||||||| Sbjct: 126 caggtggatgaagaattgaaatgca 102
>ref|XM_872923.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2R 2, transcript variant 3 (LOC537885), mRNA Length = 1126 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 452 caggtggatgaagaatagaaatgca 476 |||||||||||||||| |||||||| Sbjct: 118 caggtggatgaagaattgaaatgca 94
>ref|XM_843428.1| PREDICTED: Canis familiaris similar to ubiquitin-conjugating enzyme E2R 2 (LOC612749), mRNA Length = 1487 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 452 caggtggatgaagaatagaaatgca 476 |||||||||||||||| |||||||| Sbjct: 310 caggtggatgaagaatcgaaatgca 286
>ref|XM_673209.1| Plasmodium berghei strain ANKA ubiquitin conjugating enzyme E2, (PB000442.00.0) partial mRNA Length = 489 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 484 ccgtcgggatagacatttggatgccacat 512 ||||| ||||| ||||||||||||||||| Sbjct: 254 ccgtcaggataaacatttggatgccacat 226
>emb|BX931937.2| Gallus gallus finished cDNA, clone ChEST551o16 Length = 1085 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 452 caggtggatgaagaatagaaatgcacaca 480 |||||||||||||||| ||||| |||||| Sbjct: 337 caggtggatgaagaatggaaatacacaca 309
>emb|BX950383.1| Gallus gallus finished cDNA, clone ChEST146n3 Length = 1535 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 452 caggtggatgaagaatagaaatgcacaca 480 |||||||||||||||| ||||| |||||| Sbjct: 314 caggtggatgaagaatggaaatacacaca 286
>emb|BX933891.1| Gallus gallus finished cDNA, clone ChEST129g2 Length = 1558 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 452 caggtggatgaagaatagaaatgcacaca 480 |||||||||||||||| ||||| |||||| Sbjct: 337 caggtggatgaagaatggaaatacacaca 309
>emb|AL451137.8| Human DNA sequence from clone RP11-18A15 on chromosome 9 Contains a CpG island, complete sequence Length = 162837 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tttctctccagtccttagca 321 |||||||||||||||||||| Sbjct: 7498 tttctctccagtccttagca 7517
>emb|AJ400879.1|HSA400879 Homo sapiens ST5 gene for suppression of tumorigenicity 5, L27a gene for ribosomal protein L27a and KIAA0298 gene Length = 275434 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 tttcagagagacaagaccaa 115 |||||||||||||||||||| Sbjct: 43664 tttcagagagacaagaccaa 43645
>emb|AL590522.7| Mouse DNA sequence from clone RP23-117C5 on chromosome 13 Contains the Prlpc2, Prlpe and Prlpf genes for prolactin-like proteins C2 (1600019F10RIK, Prlpc beta), E (Prlpg) and F (Plp-f), and genes 1600032B14RIK, 1600017L04RIK (3830403L08RIK) and 1600014J19RIK for novel proteins similar to prolactin, complete sequence Length = 211776 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 aagaatagaaatgcacacac 481 |||||||||||||||||||| Sbjct: 195521 aagaatagaaatgcacacac 195502
>gb|BC041871.1| Homo sapiens cDNA clone IMAGE:5271825 Length = 1932 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tttctctccagtccttagca 321 |||||||||||||||||||| Sbjct: 1409 tttctctccagtccttagca 1390
>gb|AC026894.7| Homo sapiens chromosome , clone RP11-318C2, complete sequence Length = 224761 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 tttcagagagacaagaccaa 115 |||||||||||||||||||| Sbjct: 154023 tttcagagagacaagaccaa 154004
>gb|AC096766.3| Homo sapiens BAC clone RP11-678H22 from 4, complete sequence Length = 173836 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 ataaacaaggggagaagtgcaagt 169 ||||||||||||||||||| |||| Sbjct: 46466 ataaacaaggggagaagtgaaagt 46489
>ref|XM_625154.1| PREDICTED: Apis mellifera similar to ENSANGP00000019471 (LOC552779), mRNA Length = 1070 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 tcataaccattgggatcatcaccaggtg 457 |||||||| |||||||||||||||||| Sbjct: 547 tcataacccatgggatcatcaccaggtg 520
>gb|AC096727.3| Homo sapiens BAC clone RP11-35D5 from 4, complete sequence Length = 157078 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 actgaacggaaaataaacaa 153 |||||||||||||||||||| Sbjct: 82458 actgaacggaaaataaacaa 82477
>emb|AL442639.2|HS5P15 Homo sapiens chromosome 9 BAC RP11-5P15, complete sequence Length = 165299 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tttctctccagtccttagca 321 |||||||||||||||||||| Sbjct: 116690 tttctctccagtccttagca 116709 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,981,064 Number of Sequences: 3902068 Number of extensions: 4981064 Number of successful extensions: 84979 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84771 Number of HSP's gapped (non-prelim): 191 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
