ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal41g19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ADA10_XENLA (Q8JIY1) ADAM 10 precursor (EC 3.4.24.81) (A disinte... 32 1.1
2XYNA_STRLI (P26514) Endo-1,4-beta-xylanase A precursor (EC 3.2.1... 30 2.4
3SPR2F_MOUSE (O70557) Small proline-rich protein 2F 30 2.4
4HA33_CLOBO (P46084) Main hemagglutinin component (HA 33 kDa subu... 30 4.1
5ACSA_DROME (Q9VP61) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (A... 29 5.4
6M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kin... 29 5.4
7LSD1_CAEEL (Q9XWP6) Probable lysine-specific histone demethylase... 28 9.2
8M3K12_RAT (Q63796) Mitogen-activated protein kinase kinase kinas... 28 9.2
9M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kin... 28 9.2
10SPR2H_MOUSE (O70559) Small proline-rich protein 2H 28 9.2

>ADA10_XENLA (Q8JIY1) ADAM 10 precursor (EC 3.4.24.81) (A disintegrin and|
           metalloproteinase domain 10) (Kuzbanian protein homolog)
           (xKuz)
          Length = 749

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +2

Query: 29  YKHNGSVILRRRE--RLARDACMLFIRDSPHRFFSRYVRTHERGYADACPRVRA 184
           ++ +G VILR++   +  ++ C LFI+ + H F+ RY  T E   A     V+A
Sbjct: 201 HEDSGPVILRKKRAAQAEKNTCQLFIQ-TDHLFYKRYGETREAVIAQISSHVKA 253



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>XYNA_STRLI (P26514) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase|
           A) (1,4-beta-D-xylan xylanohydrolase A)
          Length = 477

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -2

Query: 304 DGTEVVLWKWCEGDNQRWKIQPYY*AGQRAPCMDRCM------HGSRTYAWTCIG 158
           DGT++ LW    G NQ+W       AG+     D+C+      +GS+   ++C G
Sbjct: 374 DGTQLQLWDCHSGTNQQWAATD---AGELRVYGDKCLDAAGTSNGSKVQIYSCWG 425



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>SPR2F_MOUSE (O70557) Small proline-rich protein 2F|
          Length = 76

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 388 RCPRPCSPSTAPTRXGSPGCTAP 456
           +CP PCSPS  P     P C  P
Sbjct: 22  KCPEPCSPSVCPEPCPPPKCPEP 44



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>HA33_CLOBO (P46084) Main hemagglutinin component (HA 33 kDa subunit) (HA1)|
          Length = 285

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = -2

Query: 337 LNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPYY*AGQRAPCMDRCMHGSRTYAW 170
           LN D++     +   +VLW+W +   Q+W I+  Y   + A  + +C   +R   W
Sbjct: 157 LNSDRFLSKNLNSQIIVLWQWFDSSRQKWIIE--YNETKSAYTL-KCQENNRYLTW 209



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>ACSA_DROME (Q9VP61) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA|
           ligase) (Acyl-activating enzyme) (Acetyl-CoA synthetase)
           (ACS) (AceCS)
          Length = 670

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 472 SHPVRLVPYNPDFLXESVLWTESRD 398
           SH  R+ P  PD + E + WT+ RD
Sbjct: 231 SHLKRVTPCQPDHVEEEIPWTDDRD 255



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>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 859

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 394 PRPCSPSTAPTRXGSPGCTAPDAQGG 471
           P P    T P+   +PG T+PD+ GG
Sbjct: 635 PPPARGDTPPSEGSAPGSTSPDSPGG 660



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>LSD1_CAEEL (Q9XWP6) Probable lysine-specific histone demethylase 1 (EC|
           1.-.-.-) (Suppressor of presenilin 5) (P110b homolog)
          Length = 770

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 172 WTCIGISTLMCTYVSTEETMWAVPDE 95
           W+ +  S ++CTY+  EE M  +PD+
Sbjct: 554 WSSVPGSKVLCTYIVGEEAMLELPDD 579



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>M3K12_RAT (Q63796) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 888

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 394 PRPCSPSTAPTRXGSPGCTAPDAQGG 471
           P P    T P+   +PG T+PD+ GG
Sbjct: 668 PPPPQGDTPPSEGSAPGSTSPDSPGG 693



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>M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 888

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 394 PRPCSPSTAPTRXGSPGCTAPDAQGG 471
           P P    T P+   +PG T+PD+ GG
Sbjct: 668 PPPPQGDTPPSEGSAPGSTSPDSPGG 693



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>SPR2H_MOUSE (O70559) Small proline-rich protein 2H|
          Length = 108

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 388 RCPRPCSPSTAPTRXGSPGCTAP 456
           +CP PC P   P     P CT P
Sbjct: 58  KCPEPCPPPKCPEPCPPPKCTEP 80


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,435,842
Number of Sequences: 219361
Number of extensions: 1231085
Number of successful extensions: 3670
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3660
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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