ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal41g12 |
|---|---|
| Clone Library Name | barley_pub |
>NUS1_ASPOR (P24021) Nuclease S1 precursor (EC 3.1.30.1) (Endonuclease S1)| (Single-stranded-nucleate endonuclease) (Deoxyribonuclease S1) Length = 287 Score = 48.9 bits (115), Expect = 1e-05 Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 10/137 (7%) Frame = -3 Query: 595 DEGGNTITVHWYRRKANLHHVWDVSIIDTVMKDFYNKSLDTMVDALQTNLTEG------- 437 + GGN I V + NLHH+WD ++ + + T D L + G Sbjct: 150 EAGGNGIDVTYDGETTNLHHIWDTNMPEEAAGGYSLSVAKTYADLLTERIKTGTYSSKKD 209 Query: 436 -WSD--DVGRWESCANKKATCANDYAIESINLACNYAYKDVVQNITLGDDYYLTRYPVVE 266 W+D D+ S + A AN Y ++ L AY + + L +YY PV E Sbjct: 210 SWTDGIDIKDPVSTSMIWAADANTYVCSTV-LDDGLAY---INSTDLSGEYYDKSQPVFE 265 Query: 265 KRLAQAGVRLALILNRI 215 + +A+AG RLA L+ I Sbjct: 266 ELIAKAGYRLAAWLDLI 282
>K0853_HUMAN (Q5T200) Protein KIAA0853| Length = 1668 Score = 37.0 bits (84), Expect = 0.043 Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Frame = -2 Query: 575 HGALVPQEGQPPPRVGC---QHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGEL 405 H PQ Q PPR + RH HE Q R H RR + R + R E Sbjct: 377 HSLSSPQRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDREKDSREEREY 436 Query: 404 RQQEGDLRKRLRDREHKPGVQLRIQR 327 Q + R DRE + G R R Sbjct: 437 EQDQSSSRDHRDDREPRDGRDRRDAR 462
>CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 4) (Brain calcium channel I) (BI) (RAT brain class A) (RBA-I) Length = 2212 Score = 37.0 bits (84), Expect = 0.043 Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Frame = -2 Query: 563 VPQEGQPP-PRVGCQHHRHGHEGLLQQEPRHH--GRRPPDQPHRRLVRRCRSLGELR--- 402 VP + P + G RH H + + EPR H RRP D+P R RR R R Sbjct: 896 VPWDADPERAKAGDAPRRHTHRPVAEGEPRRHRARRRPGDEPDDRPERRPRPRDATRPAR 955 Query: 401 --QQEGDLRKRLRDREHKP 351 EGD +R R H P Sbjct: 956 AADGEGDDGERKRRHRHGP 974
>PRM2_MACMU (P35297) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 35.4 bits (80), Expect = 0.13 Identities = 28/87 (32%), Positives = 37/87 (42%) Frame = -2 Query: 584 QHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGEL 405 Q H+G ++G P V HGH RH RR + HRR R CR Sbjct: 26 QGHNGQ--EEQGLNPEHVEVYERTHGHS---HYRRRHCSRRRLHRIHRRRHRSCR----- 75 Query: 404 RQQEGDLRKRLRDREHKPGVQLRIQRC 324 R++ R R R H+ G + R +RC Sbjct: 76 RRRRRSCRHR---RRHRRGCRTRRRRC 99
>CAC1A_MOUSE (P97445) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2164 Score = 35.4 bits (80), Expect = 0.13 Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 7/69 (10%) Frame = -2 Query: 536 RVGCQHHRHGHEGLLQQEPRHH--GRRPPDQPHRRLVRRCRSLGELR-----QQEGDLRK 378 + G RH H + + EPR H RRP D+P R RR R R EGD + Sbjct: 858 KAGDAPRRHTHRPVAEGEPRRHRARRRPGDEPDDRPERRPRPRDATRPARAADGEGDDGE 917 Query: 377 RLRDREHKP 351 R R H P Sbjct: 918 RKRRHRHGP 926
>NUP3_PENSQ (P24504) Nuclease PA3 (EC 3.1.3.6) (Endonuclease PA3)| (Deoxyribonuclease PA3) Length = 270 Score = 35.0 bits (79), Expect = 0.16 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 6/131 (4%) Frame = -3 Query: 589 GGNTITVHWYRRKANLHHVWDVSIIDTVMKDFYNKSLDTMVDALQTNLTEG-WSDDVGRW 413 GGN I V + NLH WD + ++ ++ L N+ G ++ W Sbjct: 133 GGNKINVTFDGYHDNLHSDWDTYMPQKLIGGHALSDAESWAKTLVQNIESGNYTAQATGW 192 Query: 412 ESCAN--KKATCANDYAIESINLACNYAYKDVVQNITLGD---DYYLTRYPVVEKRLAQA 248 N + T A +A ++ L C + GD YY + +E ++A+ Sbjct: 193 IKGDNISEPITTATRWASDANALVCTVVMPHGAAALQTGDLYPTYYDSVIDTIELQIAKG 252 Query: 247 GVRLALILNRI 215 G RLA +N I Sbjct: 253 GYRLANWINEI 263
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 34.7 bits (78), Expect = 0.21 Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 3/86 (3%) Frame = -2 Query: 557 QEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELRQQEGDLR- 381 Q+ QPP Q+ + H QQ+P+HH + Q H+++ ++ + +++QQ+ + Sbjct: 126 QQNQPPQ----QNQQQQHHQQQQQQPQHHQQMQQQQHHQQMQQQQQHHQQMQQQQHHQQM 181 Query: 380 --KRLRDREHKPGVQLRIQRCGAEHY 309 +L+ +H+ Q + Q+ +H+ Sbjct: 182 QHHQLQQHQHQHQQQQQQQQHQQQHH 207 Score = 31.2 bits (69), Expect = 2.4 Identities = 26/135 (19%), Positives = 60/135 (44%) Frame = -2 Query: 587 RQHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGE 408 +Q HH Q+ Q P+ Q + H +QQ+ +HH + Q H+++ + Sbjct: 136 QQQHH-----QQQQQQPQHHQQMQQQQHHQQMQQQQQHHQQMQQQQHHQQMQHH-----Q 185 Query: 407 LRQQEGDLRKRLRDREHKPGVQLRIQRCGAEHYSGR*LLPHPVPGCGEETGTGRRQTRLD 228 L+Q + +++ + ++H+ + Q+ +H+ + H P ++ ++Q Sbjct: 186 LQQHQHQHQQQQQQQQHQQQHHQQQQQQQQQHHQQQQHHQHSQP--QQQHQHNQQQQHQH 243 Query: 227 TQQDI*QEESRCYAV 183 QQ Q++++ V Sbjct: 244 NQQQHQQQQNQIQMV 258
>AXN1_MOUSE (O35625) Axin-1 (Axis inhibition protein 1) (Fused protein)| Length = 863 Score = 34.7 bits (78), Expect = 0.21 Identities = 19/58 (32%), Positives = 25/58 (43%) Frame = -2 Query: 590 GRQHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRS 417 G HG VP+ G G HHRH H + H+ RP +Q + RR +S Sbjct: 506 GTASGHGKHVPKLGLKLDTAGLHHHRHVHHHV-----HHNSARPKEQMEAEVARRVQS 558
>AXN1_HUMAN (O15169) Axin-1 (Axis inhibition protein 1) (hAxin)| Length = 862 Score = 34.3 bits (77), Expect = 0.28 Identities = 19/58 (32%), Positives = 23/58 (39%) Frame = -2 Query: 590 GRQHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRS 417 G HG VP+ G G HHRH H + H RP +Q RR +S Sbjct: 508 GAASGHGKHVPKSGAKLDAAGLHHHRHVHHHV-----HHSTARPKEQVEAEATRRAQS 560
>NUP1_PENCI (P24289) Nuclease P1 (EC 3.1.30.1) (Endonuclease P1)| (Deoxyribonuclease P1) Length = 270 Score = 34.3 bits (77), Expect = 0.28 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 6/131 (4%) Frame = -3 Query: 589 GGNTITVHWYRRKANLHHVWDVSIIDTVMKDFYNKSLDTMVDALQTNLTEG-WSDDVGRW 413 GGN I V + NLH WD + ++ ++ L N+ G ++ W Sbjct: 133 GGNKINVTFDGYHDNLHSDWDTYMPQKLIGGHALSDAESWAKTLVQNIESGNYTAQAIGW 192 Query: 412 ESCAN--KKATCANDYAIESINLACNYAYKDVVQNITLGD---DYYLTRYPVVEKRLAQA 248 N + T A +A ++ L C + GD YY + +E ++A+ Sbjct: 193 IKGDNISEPITTATRWASDANALVCTVVMPHGAAALQTGDLYPTYYDSVIDTIELQIAKG 252 Query: 247 GVRLALILNRI 215 G RLA +N I Sbjct: 253 GYRLANWINEI 263
>PRM2_HUMAN (P04554) Protamine-2 (Protamine-P2) (Sperm histone P2) [Contains:| Basic nuclear protein HPI1; Basic nuclear protein HPI2; Basic nuclear protein HPS1; Basic nuclear protein HPS2; Sperm histone HP4 (Sperm protamine P4); Sperm histone HP2 (Sperm Length = 102 Score = 33.1 bits (74), Expect = 0.62 Identities = 27/87 (31%), Positives = 35/87 (40%) Frame = -2 Query: 584 QHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGEL 405 Q HHG ++G P V HG RH RR + HRR R CR Sbjct: 26 QGHHGQ--EEQGLSPEHVEVYERTHGQS---HYRRRHCSRRRLHRIHRRQHRSCR----- 75 Query: 404 RQQEGDLRKRLRDREHKPGVQLRIQRC 324 R++ R R R H+ G + R + C Sbjct: 76 RRKRRSCRHR---RRHRRGCRTRKRTC 99
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 33.1 bits (74), Expect = 0.62 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = -2 Query: 596 GRGRQHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQP 447 GR + +H A +P PP HH H H +P HH PP P Sbjct: 990 GREKSLYHSAALPPAHHHPP-----HHHHHHAP--PPQPHHHHAHPPHPP 1032
>AXN1_RAT (O70239) Axin-1 (Axis inhibition protein 1) (rAxin)| Length = 827 Score = 32.3 bits (72), Expect = 1.1 Identities = 18/58 (31%), Positives = 23/58 (39%) Frame = -2 Query: 590 GRQHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRS 417 G HG P+ G G HHRH H + H+ RP +Q RR +S Sbjct: 506 GTASGHGKHAPKLGLKLDSAGLHHHRHVHHHV-----HHNSARPKEQMEAEAARRVQS 558
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 32.0 bits (71), Expect = 1.4 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Frame = -2 Query: 554 EGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVR-RCRSLG 411 EG P + HRHG G RH GR ++P RR + R LG Sbjct: 3632 EGGPGRHASAKEHRHGDHG------RHSGRHTGEEPGRRAAKPHARDLG 3674
>AMY2_SCHPO (O42918) Probable alpha-amylase meu7 precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Meiotic expression up-regulated protein 7) Length = 774 Score = 32.0 bits (71), Expect = 1.4 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Frame = -2 Query: 578 HHGAL---VPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQP 447 HHG +P G P +H H H G + H+G +P +P Sbjct: 288 HHGKFPRPIPHNGTKPDHKPWKHEEHCHHGRFPRPVPHNGTKPDHKP 334 Score = 29.6 bits (65), Expect = 6.9 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = -2 Query: 563 VPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQP 447 VP G P +H H H G + H+G +P +P Sbjct: 184 VPHNGTKPDHKPWKHEEHCHHGKFPRPVPHNGTKPDHKP 222 Score = 29.3 bits (64), Expect = 9.0 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = -2 Query: 563 VPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQP 447 VP G P +H H H G + H+G +P +P Sbjct: 269 VPHNGTKPDHKPWKHEEHCHHGKFPRPIPHNGTKPDHKP 307
>LARP_DROME (Q9VAW5) La-related protein (dlarp)| Length = 1403 Score = 31.6 bits (70), Expect = 1.8 Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 9/126 (7%) Frame = -2 Query: 587 RQHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGE 408 R + G L+ Q+ Q + ++ G+ G QQ+ R RR S G Sbjct: 1264 RSDYVGRLLQQQHQQQQQQQHHQYQQGYGGYNQQQNR---------------RRTGSFGS 1308 Query: 407 --LRQQEGDLRKRLRDREHKPGVQLRIQRCGAEHYSGR*LLPH-------PVPGCGEETG 255 +R + G L + + G Q ++R G+ SG L PH P PG G +TG Sbjct: 1309 TTVRIRSGSLGNKPQVANRNQGSQHELRRGGSN--SG--LAPHKRQQQQKPKPGAGSQTG 1364 Query: 254 TGRRQT 237 + R T Sbjct: 1365 STRATT 1370
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 31.6 bits (70), Expect = 1.8 Identities = 16/45 (35%), Positives = 18/45 (40%) Frame = -2 Query: 581 HHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQP 447 +H G L P PP HH H H +P HH PP P Sbjct: 988 YHSGPLPPAHHHPP------HHHHHHAP--PPQPHHHHAHPPHPP 1024
>SYY_YERPS (Q66A49) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 424 Score = 31.2 bits (69), Expect = 2.4 Identities = 21/83 (25%), Positives = 38/83 (45%) Frame = +2 Query: 329 FVCVVARQVYALDRVVVCAGRLLVGAALPATDIVGPTFGEVGLEGVDHGVEALVVEVLHD 508 F + ++ AL+ +G+ + A ++ G G GL E+L LHD Sbjct: 275 FTFMSLEEINALEEEDKNSGKAPRAQYVLAENVTGMVHGPEGLAAAKRITESLFSGDLHD 334 Query: 509 RVDDADIPHVVEVGLPAVPVHRD 577 + +AD + + G+P V ++RD Sbjct: 335 -MTEADFAQLAQDGMPTVELNRD 356
>TRHY_SHEEP (P22793) Trichohyalin| Length = 1549 Score = 31.2 bits (69), Expect = 2.4 Identities = 23/77 (29%), Positives = 36/77 (46%) Frame = -2 Query: 557 QEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELRQQEGDLRK 378 QEG+P R H E LLQ+ R+ D+ R + L+++E LR+ Sbjct: 1111 QEGEPQLRQKRDRKFHEEEQLLQEREEQLRRQERDRKFREEAQ------ILKEREEQLRR 1164 Query: 377 RLRDREHKPGVQLRIQR 327 + RDR+ + QL +R Sbjct: 1165 QERDRKFREEEQLLQER 1181
>SLEB_BACHD (Q9KCE0) Spore cortex-lytic enzyme precursor (SCLE)| Length = 330 Score = 30.8 bits (68), Expect = 3.1 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = -2 Query: 593 RGRQHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQP 447 +GR+ H VP++ Q P+ R G EG+ Q GR P P Sbjct: 113 QGRKFTHYGGVPKQIQKGPKGSADERRRGREGVRQPRADRPGRDAPAAP 161
>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed| Length = 596 Score = 30.8 bits (68), Expect = 3.1 Identities = 17/47 (36%), Positives = 20/47 (42%) Frame = -2 Query: 587 RQHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQP 447 +Q G+ P QPP HH+H H L P HH P QP Sbjct: 77 KQEPLGSDGPMPAQPP-----HHHQHPHHHQLPHHP-HHQHHPQQQP 117
>GATB_BOMMO (P52167) Transcription factor BCFI (GATA-beta) (BmGATA-beta)| Length = 508 Score = 30.8 bits (68), Expect = 3.1 Identities = 31/114 (27%), Positives = 39/114 (34%), Gaps = 14/114 (12%) Frame = -2 Query: 545 PPPRVGCQHHRHGHEG--------------LLQQEPRHHGRRPPDQPHRRLVRRCRSLGE 408 PPP HH H +G L Q+ H R P +P L R R + E Sbjct: 100 PPPPYSHDHHHHLEQGGGGNGAASRCTAVRLQQRRAILHQRSRPLRPAAAL-DRVRRVSE 158 Query: 407 LRQQEGDLRKRLRDREHKPGVQLRIQRCGAEHYSGR*LLPHPVPGCGEETGTGR 246 LRQQ + R+R G R+ G+ P P P GR Sbjct: 159 LRQQRDTGGRIRRERAEGWGSPCRLSTRGS-------AAPSPAPAGARSAVAGR 205
>PRM2_SEMEN (Q9GKM1) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 103 Score = 30.8 bits (68), Expect = 3.1 Identities = 26/87 (29%), Positives = 38/87 (43%) Frame = -2 Query: 584 QHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGEL 405 Q H+G ++G P V + + H+G R RR + HRR R CR Sbjct: 26 QGHNGQ--EEQGLSPEHV--EVYERTHQGYSHHRRRRCSRRRLYRIHRRRHRSCR----- 76 Query: 404 RQQEGDLRKRLRDREHKPGVQLRIQRC 324 R++ R R R H+ G + R +RC Sbjct: 77 RRRRRSCRHR---RRHRRGCRTRRRRC 100
>KE4L_CAEEL (Q9XTQ7) Hypothetical Ke4-like protein H13N06.5 in chromosome X| Length = 462 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/69 (26%), Positives = 22/69 (31%) Frame = -2 Query: 590 GRQHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLG 411 G H HG G HH H H+ HHG D H + +G Sbjct: 87 GHAHDHGHAHDHHGHSHDEEEDHHHGHAHD--------HHGHSHEDHGHSHGAESAKQVG 138 Query: 410 ELRQQEGDL 384 + Q G L Sbjct: 139 DEYQYTGFL 147
>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1183 Score = 30.4 bits (67), Expect = 4.0 Identities = 19/60 (31%), Positives = 23/60 (38%) Frame = -2 Query: 581 HHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELR 402 HHH Q+ QP P+ Q H HG+ G H + H SLG LR Sbjct: 478 HHH----QQQQQPQPQPQPQQHHHGNSGPPPPGAYPHPLESSNSHHAHPYNMSPSLGSLR 533
>PRM2_MACNE (P35298) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 103 Score = 30.4 bits (67), Expect = 4.0 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 3/90 (3%) Frame = -2 Query: 584 QHHHGALVPQEGQPPPRVGCQH---HRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSL 414 Q HG GQ + +H + H G R RR + HRR R CR Sbjct: 19 QQVHGQDQGHNGQEEQGLNPEHVEVYERTHRGHSHHRRRRCSRRRLHRIHRRRHRSCR-- 76 Query: 413 GELRQQEGDLRKRLRDREHKPGVQLRIQRC 324 R++ R R R H+ G + R +RC Sbjct: 77 ---RRRRRSCRHR---RRHRRGCRTRRRRC 100
>PRM2_MACFU (P61253) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 103 Score = 30.4 bits (67), Expect = 4.0 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 3/90 (3%) Frame = -2 Query: 584 QHHHGALVPQEGQPPPRVGCQH---HRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSL 414 Q HG GQ + +H + H G R RR + HRR R CR Sbjct: 19 QQVHGQDQGHNGQEEQGLNPEHVEVYERTHRGHSHHRRRRCSRRRLHRIHRRRHRSCR-- 76 Query: 413 GELRQQEGDLRKRLRDREHKPGVQLRIQRC 324 R++ R R R H+ G + R +RC Sbjct: 77 ---RRRRRSCRHR---RRHRRGCRTRRRRC 100
>SYY_YERPE (Q8ZE20) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 424 Score = 30.0 bits (66), Expect = 5.3 Identities = 20/83 (24%), Positives = 38/83 (45%) Frame = +2 Query: 329 FVCVVARQVYALDRVVVCAGRLLVGAALPATDIVGPTFGEVGLEGVDHGVEALVVEVLHD 508 F + ++ AL+ +G+ + A ++ G G GL ++L LHD Sbjct: 275 FTFMSLEEINALEEEDKNSGKAPRAQYVLAENVTGMVHGPEGLAAAKRITDSLFSGDLHD 334 Query: 509 RVDDADIPHVVEVGLPAVPVHRD 577 + +AD + + G+P V ++RD Sbjct: 335 -MTEADFAQLAQDGMPTVELNRD 356
>HUNB_DROSO (O46258) Protein hunchback (Fragments)| Length = 159 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = -2 Query: 521 HHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELRQQE 393 HH H H G Q + RH+ PH+ + + L+QQ+ Sbjct: 20 HHHHHHHGHHQHQQRHNSNSNASSPHQSPLPNLQLEQYLKQQQ 62
>HUNB_DROMM (O46248) Protein hunchback (Fragments)| Length = 158 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = -2 Query: 521 HHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELRQQE 393 HH H H G Q + RH+ PH+ + + L+QQ+ Sbjct: 20 HHHHHHHGHHQHQQRHNSNSNASSPHQSPLPNLQLEQYLKQQQ 62
>M3K13_HUMAN (O43283) Mitogen-activated protein kinase kinase kinase 13 (EC| 2.7.11.25) (Mixed lineage kinase) (MLK) (Leucine zipper-bearing kinase) Length = 966 Score = 30.0 bits (66), Expect = 5.3 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 581 HHHGALVPQEGQPPPRVGCQHH 516 HHH +L Q QPPP + HH Sbjct: 632 HHHNSLQQQYQQPPPAMSQSHH 653
>SCG1_PIG (Q9GLG4) Secretogranin-1 precursor (Secretogranin I) (SgI)| (Chromogranin B) (CgB) [Contains: Peptide SR-17; Peptide HQ-34; Peptide KR-11] Length = 668 Score = 30.0 bits (66), Expect = 5.3 Identities = 23/80 (28%), Positives = 29/80 (36%), Gaps = 13/80 (16%) Frame = -2 Query: 584 QHHHGAL----VPQEGQPPPRVGCQHHRHGHEGLL---------QQEPRHHGRRPPDQPH 444 +HHHG PQEG PPP E +L + P H+ + H Sbjct: 277 RHHHGRSRPDRAPQEGSPPPEERGHPREESEESVLGLASPGGQRTRHPTHYPASEEEAEH 336 Query: 443 RRLVRRCRSLGELRQQEGDL 384 VR S+ Q GDL Sbjct: 337 GEEVRSSSSV----QAPGDL 352
>LMO6_MOUSE (Q80VL3) LIM domain only protein 6 (Triple LIM domain protein 6)| Length = 624 Score = 30.0 bits (66), Expect = 5.3 Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Frame = -2 Query: 545 PPPRVGCQHHRHGHEGLLQQEPR----HHGRRPPDQPHRR 438 PPPR HH H H Q+ R HH P H R Sbjct: 503 PPPRTPSCHHHHHHRRRRQRHRRRGSHHHHHHPGRHGHHR 542
>CCG8_NEUCR (Q01306) Clock-controlled protein 8| Length = 661 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -2 Query: 587 RQHHHGALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPH 444 +QH H Q+ Q PP QHH+H QQ+ +HH + Q H Sbjct: 16 QQHEHQQ--HQQYQQPP----QHHQHYEAPQHQQQHQHHHHQQQQQQH 57
>BARH2_DROME (Q24256) Homeobox protein B-H2 (Homeobox protein BarH2)| Length = 645 Score = 30.0 bits (66), Expect = 5.3 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 7/78 (8%) Frame = -2 Query: 560 PQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRR------LVRRCRSLGELRQ 399 P + + + QHH H + QQ+ HH ++ Q H++ +V++ + L R+ Sbjct: 94 PTDSEREQSLVAQHHHHHQQ---QQQHHHHQQQQQQQQHQQAALQQYIVQQQQLLRFERE 150 Query: 398 QEGDL-RKRLRDREHKPG 348 +E + R+ R+R PG Sbjct: 151 REREREREHYRERHSPPG 168
>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2505 Score = 29.6 bits (65), Expect = 6.9 Identities = 30/106 (28%), Positives = 34/106 (32%) Frame = -2 Query: 557 QEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELRQQEGDLRK 378 + G+P R QHH H H HH PPD+ R R Q R Sbjct: 2199 ERGRPKDRKHRQHHHHHH--------HHHHPPPPDKDRYAQERPDHGRARARDQRWS-RS 2249 Query: 377 RLRDREHKPGVQLRIQRCGAEHYSGR*LLPHPVPGCGEETGTGRRQ 240 REH R G+ SG P P GRRQ Sbjct: 2250 PSEGREH------MAHRQGSSSVSGS---PAPSTSGTSTPRRGRRQ 2286
>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)| Length = 657 Score = 29.6 bits (65), Expect = 6.9 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = -2 Query: 581 HHHGALVPQEGQPPPRVGCQ-----HHRHGHEGLLQQEPRHHGRRPP 456 HHHG + Q Q +V Q HH H H L Q+P+ PP Sbjct: 89 HHHGEVNHQAPQVHQQVHGQDQAHHHHHHHHHHLHPQQPQGTVANPP 135
>VGLX_PRVRI (P07562) Secreted glycoprotein GX| Length = 498 Score = 29.6 bits (65), Expect = 6.9 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = -2 Query: 560 PQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPD 453 P +P PR H HGH + P+ H R PP+ Sbjct: 338 PPPPRPHPRGRDHDHDHGHHRADDRGPQRHHRLPPE 373
>VEIN_DROME (Q94918) Protein vein precursor (Epidermal growth factor-like| protein) (Protein defective dorsal discs) Length = 623 Score = 29.6 bits (65), Expect = 6.9 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Frame = -2 Query: 524 QHHRHGHEGLLQQEPRHHGRRPPDQP----HRRLVRRCRSLGELRQQEGDLRKRLRDRE 360 Q R GH LQQ+ R H R+ DQ ++ R+ +S + +QQ+ RK R + Sbjct: 256 QQQRTGHRQQLQQDKRDHRRQRQDQQKEQRQQQQQRQHKSGNKHQQQQQQRRKHQRKHQ 314
>DNLJ_CHLPN (Q9Z934) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase| [NAD+]) Length = 662 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 10/83 (12%) Frame = +2 Query: 362 LDRVVVCAGRLLVGAALPAT---------DIVGPTFGEV-GLEGVDHGVEALVVEVLHDR 511 LDR +V G L+G + ++ TF E+ LEG+ V + E D Sbjct: 503 LDRFLVALGIPLIGIGVATVLAGHFETLDRVISATFEELLSLEGIGEKVAHAIAEYFSDS 562 Query: 512 VDDADIPHVVEVGLPAVPVHRDG 580 +I + ++G+ P H+ G Sbjct: 563 THLNEIKKMQDLGVCISPYHKSG 585
>APXL_HUMAN (Q13796) Apical-like protein (APXL protein)| Length = 1616 Score = 29.3 bits (64), Expect = 9.0 Identities = 32/112 (28%), Positives = 38/112 (33%), Gaps = 2/112 (1%) Frame = -2 Query: 569 ALVPQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSL--GELRQQ 396 AL E PPP VG Q PRHH +P P R RC L G Sbjct: 500 ALGALESLPPPTVG-------------QSPRHHLPQPEGPPDARETGRCYPLDKGAEGCS 546 Query: 395 EGDLRKRLRDREHKPGVQLRIQRCGAEHYSGR*LLPHPVPGCGEETGTGRRQ 240 G R K +L A+ S R + P P T G+R+ Sbjct: 547 AGAQEPPRASRAEKASQRLAASITWADGESSR-ICPQETPLLHSLTQEGKRR 597
>SEPP1_BOVIN (P49907) Selenoprotein P-like protein precursor| Length = 402 Score = 29.3 bits (64), Expect = 9.0 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 15/70 (21%) Frame = -2 Query: 590 GRQHHHGALVPQEGQP--------PPRVGCQHHRHGHEGLLQQEPRHHGRRP-------P 456 G Q H A + + +P PP G HH H H+G +Q + P P Sbjct: 230 GHQLHENAHLSESPKPDTPDTPENPPTSGLHHHHHRHKGPQRQGHSDNCDTPLGSESLQP 289 Query: 455 DQPHRRLVRR 426 P ++L R+ Sbjct: 290 SLPQKKLCRK 299
>BAGS_BOMMO (Q9BLJ6) BAG domain-containing protein Samui| Length = 677 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/73 (24%), Positives = 31/73 (42%) Frame = -2 Query: 560 PQEGQPPPRVGCQHHRHGHEGLLQQEPRHHGRRPPDQPHRRLVRRCRSLGELRQQEGDLR 381 PQ+ QPPP Q H+ QQ+P + P QP + + ++ + D+ Sbjct: 333 PQQHQPPPPKSPQQHQPPPPKSPQQQPPPQREQTPPQPKTQQPSSNDPITQILSIQTDVL 392 Query: 380 KRLRDREHKPGVQ 342 + D E+ G + Sbjct: 393 NLMTDVENFTGTK 405
>MUTS2_HALMA (Q5UYI1) DNA mismatch repair protein mutS 2| Length = 947 Score = 29.3 bits (64), Expect = 9.0 Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 8/101 (7%) Frame = +2 Query: 302 SQSNVLHHIFVCVVARQVY-ALDRVVVCAGRL-----LVGAALPAT--DIVGPTFGEVGL 457 S ++ L + C V +V +RV A RL LV A A D PT G G+ Sbjct: 546 SAADDLEYDLFCAVRDEVADEAERVQALADRLARLDVLVSFAEVAAQYDYCRPTVGSDGI 605 Query: 458 EGVDHGVEALVVEVLHDRVDDADIPHVVEVGLPAVPVHRDG 580 + V G +V +R +DA IP+ +G VP RDG Sbjct: 606 D-VTAGRHPVV-----ERTEDAFIPNDTHLGSGPVPASRDG 640
>MOEA2_MYCTU (O53725) Molybdopterin biosynthesis protein moeA 2| Length = 405 Score = 29.3 bits (64), Expect = 9.0 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = +2 Query: 362 LDRVVVCAGRLLV--GAALPATDIVGPTFGEVGLEGVDHGVEALVVEVLHDRVDDADIPH 535 LDR V A ++ G + A ++V FG G DHGVE + V + +P Sbjct: 235 LDRYAVDADLIITSGGVSAGAYEVVKDAFGSADYRGGDHGVEFVKVAM------QPGMPQ 288 Query: 536 VV--EVGLPAVPVHRDGVAALV 595 V G P V + + V+ALV Sbjct: 289 GVGRVAGTPIVTLPGNPVSALV 310
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%) Frame = -2 Query: 584 QHHHGALVPQEGQPPPRVGCQHH-RHGHEGLLQQEPRHHGRRPPDQ 450 Q H P PPP QHH H H+ L Q P PP Q Sbjct: 406 QQHSQLQPPHSQHPPPHQHIQHHPNHQHQTLAHQPP------PPPQ 445 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,308,415 Number of Sequences: 219361 Number of extensions: 1896967 Number of successful extensions: 6574 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 6166 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6506 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
