ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal41f23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ491818.1|OSA491818 Oryza sativa (japonica cultivar-group) ... 228 2e-56
2ref|XM_464321.1| Oryza sativa (japonica cultivar-group), mRNA 206 6e-50
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
4dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
5dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
6emb|AJ491817.1|OSA491817 Oryza sativa (japonica cultivar-group) ... 131 3e-27
7dbj|AK120889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
8dbj|AK109852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
9emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4,... 46 0.13
10dbj|AB234305.1| Phragmites australis e-PhaHKT1 mRNA for high-aff... 46 0.13
11dbj|AB234304.1| Phragmites australis n-PhaHKT1 mRNA for high-aff... 46 0.13
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
13gb|AF237672.1|AF237672 Arabidopsis thaliana sodium transporter (... 46 0.13
14emb|AJ491853.1|OSA491853 Oryza sativa (japonica cultivar-group) ... 46 0.13
15gb|AF176035.1|AF176035 Eucalyptus camaldulensis potassium-sodium... 44 0.52
16emb|Z81084.1|CEF46A9 Caenorhabditis elegans Cosmid F46A9, comple... 42 2.1
17gb|AF367366.1|AF367366 Mesembryanthemum crystallinum putative po... 42 2.1
18gb|AC115877.13| Mus musculus chromosome 15, clone RP24-358H21, c... 40 8.1
19ref|NM_117099.3| Arabidopsis thaliana HKT1 (HIGH-AFFINITY K+ TRA... 40 8.1
20gb|AC166800.5| Mus musculus chromosome 1, clone RP24-260I21, com... 40 8.1
21emb|AL032618.1|CEY42A5A Caenorhabditis elegans YAC Y42A5A, compl... 40 8.1
22gb|AC118728.12| Mus musculus chromosome 1, clone RP24-168F13, co... 40 8.1
23emb|AL445569.1| Human DNA sequence from clone RP11-135M8 on chro... 40 8.1
24gb|AC009509.7| Homo sapiens 12p11-37.2-54.4 BAC RP11-1060J15 (Ro... 40 8.1
25gb|AC100843.2| Homo sapiens chromosome 18, clone RP11-640A1, com... 40 8.1
26emb|BX323050.6| Zebrafish DNA sequence from clone DKEYP-1G12 in ... 40 8.1
27gb|AF298900.1|AF298900 Homo sapiens clone 390j15 chromosome 18 m... 40 8.1
28ref|NM_073420.1| Caenorhabditis elegans Y42A5A.2 (Y42A5A.2) mRNA... 40 8.1
29emb|BX827043.1|CNS0A3C1 Arabidopsis thaliana Full-length cDNA Co... 40 8.1
30emb|BX826395.1|CNS0A3DM Arabidopsis thaliana Full-length cDNA Co... 40 8.1
31gb|BT005751.1| Arabidopsis thaliana clone RAFL15-31-F16 (R50120)... 40 8.1
32gb|AC161879.5| Mus musculus BAC clone RP23-264A15 from chromosom... 40 8.1 
>emb|AJ491818.1|OSA491818 Oryza sativa (japonica cultivar-group) mRNA for putative sodium
            transporter (hkt6 gene)
          Length = 1679

 Score =  228 bits (115), Expect = 2e-56
 Identities = 310/375 (82%)
 Strand = Plus / Minus

                                                                        
Query: 185  gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 244
            |||| |||||||||||||| ||| |||| |||||||  ||  |||  |||||||||||||
Sbjct: 1655 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 1596

                                                                        
Query: 245  agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 304
            | | |||||| |||||||| |||  |||||| | || ||||||| | || |||||||| |
Sbjct: 1595 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 1536

                                                                        
Query: 305  atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 364
            | || |||||||||||||||   || || || |||||||||||||||||||| || |  |
Sbjct: 1535 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 1476

                                                                        
Query: 365  acaagcccacgtttccatatgcacttacaacttcgaacagtatgctcaaaacattgaaat 424
            | || ||||| |||||||||||||| || ||||| |||| |||||| |||||||||||||
Sbjct: 1475 agaaccccacatttccatatgcactgacgacttcaaacaatatgctgaaaacattgaaat 1416

                                                                        
Query: 425  taagtggatctgtggtcagtgcttctcgctcagtgatgcaaattagcatgacaaagatag 484
            ||||||||||||| | ||  |  || || || ||||||||||||||||| ||||||||||
Sbjct: 1415 taagtggatctgtagccatcgagtcccgttctgtgatgcaaattagcattacaaagatag 1356

                                                                        
Query: 485  ccaaataagacaactgggacaagatccagtcctccaacaacccttttctgttgtatctct 544
            ||||||||||||  || || |||||||||| |||||| | ||||||||| |||| | |||
Sbjct: 1355 ccaaataagacatatgtgagaagatccagttctccaatagcccttttcttttgtttatct 1296

                           
Query: 545  tctcgtccttagaat 559
            |||||  ||||||||
Sbjct: 1295 tctcggtcttagaat 1281
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>ref|XM_464321.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1593

 Score =  206 bits (104), Expect = 6e-50
 Identities = 304/370 (82%), Gaps = 3/370 (0%)
 Strand = Plus / Minus

                                                                        
Query: 190  tatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccgaagacc 249
            |||||||||||||| ||| |||| |||||||  ||  |||  |||||||||||||| | |
Sbjct: 1592 tatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccgaaaagc 1533

                                                                        
Query: 250  atgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccatatgaa 309
            ||||| |||||||| |||  |||||| | || ||||||| | || |||||||| || || 
Sbjct: 1532 atgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgtacgag 1473

                                                                        
Query: 310  gcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattgacaag 369
            |||||||||||||||   || || || |||||||||||||||||||| || |  || || 
Sbjct: 1472 gcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccgagaac 1413

                                                                        
Query: 370  cccacgtttccatatgcacttacaacttcgaacagtatgctcaaaacattgaaattaagt 429
            ||||| ||||||||||||   || ||||| |||| |||||| ||||||||||||||||||
Sbjct: 1412 cccacatttccatatgca---acgacttcaaacaatatgctgaaaacattgaaattaagt 1356

                                                                        
Query: 430  ggatctgtggtcagtgcttctcgctcagtgatgcaaattagcatgacaaagatagccaaa 489
            |||||||| | ||  |  || || || ||||||||||||||||| |||||||||||||||
Sbjct: 1355 ggatctgtagccatcgagtcccgttctgtgatgcaaattagcattacaaagatagccaaa 1296

                                                                        
Query: 490  taagacaactgggacaagatccagtcctccaacaacccttttctgttgtatctcttctcg 549
            |||||||  || || |||||||||| |||||| | ||||||||| |||| | ||||||||
Sbjct: 1295 taagacatatgtgagaagatccagttctccaatagcccttttcttttgtttatcttctcg 1236

                      
Query: 550  tccttagaat 559
              ||||||||
Sbjct: 1235 gtcttagaat 1226
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  131 bits (66), Expect = 3e-27
 Identities = 141/166 (84%)
 Strand = Plus / Minus

                                                                           
Query: 394     acttcgaacagtatgctcaaaacattgaaattaagtggatctgtggtcagtgcttctcgc 453
               ||||| |||| |||||| |||||||||||||||||||||||||| | ||  |  || || 
Sbjct: 4105327 acttcaaacaatatgctgaaaacattgaaattaagtggatctgtagccatcgagtcccgt 4105268

                                                                           
Query: 454     tcagtgatgcaaattagcatgacaaagatagccaaataagacaactgggacaagatccag 513
               || ||||||||||||||||| ||||||||||||||||||||||  || || |||||||||
Sbjct: 4105267 tctgtgatgcaaattagcattacaaagatagccaaataagacatatgtgagaagatccag 4105208

                                                             
Query: 514     tcctccaacaacccttttctgttgtatctcttctcgtccttagaat 559
               | |||||| | ||||||||| |||| | ||||||||  ||||||||
Sbjct: 4105207 ttctccaatagcccttttcttttgtttatcttctcggtcttagaat 4105162



 Score =  105 bits (53), Expect = 2e-19
 Identities = 167/205 (81%)
 Strand = Plus / Minus

                                                                           
Query: 185     gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 244
               |||| |||||||||||||| ||| |||| |||||||  ||  |||  |||||||||||||
Sbjct: 4105630 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 4105571

                                                                           
Query: 245     agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 304
               | | |||||| |||||||| |||  |||||| | || ||||||| | || |||||||| |
Sbjct: 4105570 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 4105511

                                                                           
Query: 305     atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 364
               | || |||||||||||||||   || || || |||||||||||||||||||| || |  |
Sbjct: 4105510 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 4105451

                                        
Query: 365     acaagcccacgtttccatatgcact 389
               | || ||||| ||||||||||||||
Sbjct: 4105450 agaaccccacatttccatatgcact 4105426
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>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1077_E05
          Length = 116305

 Score =  131 bits (66), Expect = 3e-27
 Identities = 141/166 (84%)
 Strand = Plus / Minus

                                                                         
Query: 394   acttcgaacagtatgctcaaaacattgaaattaagtggatctgtggtcagtgcttctcgc 453
             ||||| |||| |||||| |||||||||||||||||||||||||| | ||  |  || || 
Sbjct: 15341 acttcaaacaatatgctgaaaacattgaaattaagtggatctgtagccatcgagtcccgt 15282

                                                                         
Query: 454   tcagtgatgcaaattagcatgacaaagatagccaaataagacaactgggacaagatccag 513
             || ||||||||||||||||| ||||||||||||||||||||||  || || |||||||||
Sbjct: 15281 tctgtgatgcaaattagcattacaaagatagccaaataagacatatgtgagaagatccag 15222

                                                           
Query: 514   tcctccaacaacccttttctgttgtatctcttctcgtccttagaat 559
             | |||||| | ||||||||| |||| | ||||||||  ||||||||
Sbjct: 15221 ttctccaatagcccttttcttttgtttatcttctcggtcttagaat 15176



 Score =  105 bits (53), Expect = 2e-19
 Identities = 167/205 (81%)
 Strand = Plus / Minus

                                                                         
Query: 185   gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 244
             |||| |||||||||||||| ||| |||| |||||||  ||  |||  |||||||||||||
Sbjct: 15644 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 15585

                                                                         
Query: 245   agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 304
             | | |||||| |||||||| |||  |||||| | || ||||||| | || |||||||| |
Sbjct: 15584 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 15525

                                                                         
Query: 305   atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 364
             | || |||||||||||||||   || || || |||||||||||||||||||| || |  |
Sbjct: 15524 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 15465

                                      
Query: 365   acaagcccacgtttccatatgcact 389
             | || ||||| ||||||||||||||
Sbjct: 15464 agaaccccacatttccatatgcact 15440
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>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0073A21
          Length = 170051

 Score =  131 bits (66), Expect = 3e-27
 Identities = 141/166 (84%)
 Strand = Plus / Minus

                                                                          
Query: 394    acttcgaacagtatgctcaaaacattgaaattaagtggatctgtggtcagtgcttctcgc 453
              ||||| |||| |||||| |||||||||||||||||||||||||| | ||  |  || || 
Sbjct: 151993 acttcaaacaatatgctgaaaacattgaaattaagtggatctgtagccatcgagtcccgt 151934

                                                                          
Query: 454    tcagtgatgcaaattagcatgacaaagatagccaaataagacaactgggacaagatccag 513
              || ||||||||||||||||| ||||||||||||||||||||||  || || |||||||||
Sbjct: 151933 tctgtgatgcaaattagcattacaaagatagccaaataagacatatgtgagaagatccag 151874

                                                            
Query: 514    tcctccaacaacccttttctgttgtatctcttctcgtccttagaat 559
              | |||||| | ||||||||| |||| | ||||||||  ||||||||
Sbjct: 151873 ttctccaatagcccttttcttttgtttatcttctcggtcttagaat 151828



 Score =  105 bits (53), Expect = 2e-19
 Identities = 167/205 (81%)
 Strand = Plus / Minus

                                                                          
Query: 185    gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 244
              |||| |||||||||||||| ||| |||| |||||||  ||  |||  |||||||||||||
Sbjct: 152296 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 152237

                                                                          
Query: 245    agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 304
              | | |||||| |||||||| |||  |||||| | || ||||||| | || |||||||| |
Sbjct: 152236 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 152177

                                                                          
Query: 305    atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 364
              | || |||||||||||||||   || || || |||||||||||||||||||| || |  |
Sbjct: 152176 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 152117

                                       
Query: 365    acaagcccacgtttccatatgcact 389
              | || ||||| ||||||||||||||
Sbjct: 152116 agaaccccacatttccatatgcact 152092
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>emb|AJ491817.1|OSA491817 Oryza sativa (japonica cultivar-group) partial hkt6 gene for putative
            sodium transporter, exons 1-3
          Length = 3157

 Score =  131 bits (66), Expect = 3e-27
 Identities = 141/166 (84%)
 Strand = Plus / Minus

                                                                        
Query: 394  acttcgaacagtatgctcaaaacattgaaattaagtggatctgtggtcagtgcttctcgc 453
            ||||| |||| |||||| |||||||||||||||||||||||||| | ||  |  || || 
Sbjct: 2365 acttcaaacaatatgctgaaaacattgaaattaagtggatctgtagccatcgagtcccgt 2306

                                                                        
Query: 454  tcagtgatgcaaattagcatgacaaagatagccaaataagacaactgggacaagatccag 513
            || ||||||||||||||||| ||||||||||||||||||||||  || || |||||||||
Sbjct: 2305 tctgtgatgcaaattagcattacaaagatagccaaataagacatatgtgagaagatccag 2246

                                                          
Query: 514  tcctccaacaacccttttctgttgtatctcttctcgtccttagaat 559
            | |||||| | ||||||||| |||| | ||||||||  ||||||||
Sbjct: 2245 ttctccaatagcccttttcttttgtttatcttctcggtcttagaat 2200



 Score =  105 bits (53), Expect = 2e-19
 Identities = 167/205 (81%)
 Strand = Plus / Minus

                                                                        
Query: 185  gatgctatctaagcttccatgcttttcctcccttcaaattggacgccttaagcctcccga 244
            |||| |||||||||||||| ||| |||| |||||||  ||  |||  |||||||||||||
Sbjct: 2668 gatgttatctaagcttccaggctcttccacccttcatgttaaacgttttaagcctcccga 2609

                                                                        
Query: 245  agaccatgacaatgatcagaatcattttcccctcgttgctccatcttccagcaaacccat 304
            | | |||||| |||||||| |||  |||||| | || ||||||| | || |||||||| |
Sbjct: 2608 aaagcatgacgatgatcaggatcgctttcccattgtcgctccatttccccgcaaacccgt 2549

                                                                        
Query: 305  atgaagcatccttgcagcgtaggtcttgtttgagtagcctcttgcagctgtaacccattg 364
            | || |||||||||||||||   || || || |||||||||||||||||||| || |  |
Sbjct: 2548 acgaggcatccttgcagcgtgcatcatggttcagtagcctcttgcagctgtagccaaccg 2489

                                     
Query: 365  acaagcccacgtttccatatgcact 389
            | || ||||| ||||||||||||||
Sbjct: 2488 agaaccccacatttccatatgcact 2464
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>dbj|AK120889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029F13, full
            insert sequence
          Length = 2267

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 347  tgcagctgtaacccattgacaagcccacgtttccatatgcacttacaacttcga 400
            |||| ||||| |||||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 1427 tgcaactgtagcccattgagaaccccacatttccatatgcactgacaacttcga 1374
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>dbj|AK109852.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F09, full
            insert sequence
          Length = 1723

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 347  tgcagctgtaacccattgacaagcccacgtttccatatgcacttacaacttcga 400
            |||| ||||| |||||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 1429 tgcaactgtagcccattgagaaccccacatttccatatgcactgacaacttcga 1376
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>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
             complete sequence
          Length = 179798

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 347   tgcagctgtaacccattgacaagcccacgtttccatatgcact 389
             |||| ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 36451 tgcaactgtagcccattgagaaccccacatttccatatgcact 36493
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>dbj|AB234305.1| Phragmites australis e-PhaHKT1 mRNA for high-affinity potassium
            transporter, complete cds
          Length = 1906

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 229  gccttaagcctcccgaagaccatgacaatgatcagaatcattttcccctcgttgctcca 287
            ||||| ||||||||  ||| |||||||| |||||| ||||  ||||| |||||||||||
Sbjct: 1644 gccttgagcctcccatagagcatgacaaagatcagcatcaacttcccttcgttgctcca 1586
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>dbj|AB234304.1| Phragmites australis n-PhaHKT1 mRNA for high-affinity potassium
            transporter, complete cds
          Length = 1828

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 229  gccttaagcctcccgaagaccatgacaatgatcagaatcattttcccctcgttgctcca 287
            ||||| ||||||||  ||| |||||||| |||||| ||||  ||||| |||||||||||
Sbjct: 1566 gccttgagcctcccatagagcatgacaaagatcagcatcaacttcccttcgttgctcca 1508
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                           
Query: 347      tgcagctgtaacccattgacaagcccacgtttccatatgcact 389
                |||| ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 30769029 tgcaactgtagcccattgagaaccccacatttccatatgcact 30769071
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>gb|AF237672.1|AF237672 Arabidopsis thaliana sodium transporter (HKT1) mRNA, complete cds
          Length = 1521

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 370  cccacgtttccatatgcacttacaacttcga 400
            |||||||||||||||||||| | ||||||||
Sbjct: 1325 cccacgtttccatatgcactgataacttcga 1295
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>emb|AJ491853.1|OSA491853 Oryza sativa (japonica cultivar-group) partial hkt7 gene for putative
            sodium transporter, exons 1-3
          Length = 5400

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 347  tgcagctgtaacccattgacaagcccacgtttccatatgcact 389
            |||| ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 4783 tgcaactgtagcccattgagaaccccacatttccatatgcact 4741
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>gb|AF176035.1|AF176035 Eucalyptus camaldulensis potassium-sodium symporter HKT1 mRNA,
            complete cds
          Length = 1992

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 370  cccacgtttccatatgcacttacaacttcgaacagtatgctcaaaacattgaaattaagt 429
            ||||| ||||||||||| ||||| ||||||| ||  ||| |||| || |||||||| || 
Sbjct: 1517 cccacatttccatatgcgcttaccacttcgaccacgatgttcaacacgttgaaattgagg 1458

                  
Query: 430  ggatct 435
            ||||||
Sbjct: 1457 ggatct 1452
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>emb|Z81084.1|CEF46A9 Caenorhabditis elegans Cosmid F46A9, complete sequence
          Length = 29867

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 198   cttccatgcttttcctccctt 218
             |||||||||||||||||||||
Sbjct: 14297 cttccatgcttttcctccctt 14277
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>gb|AF367366.1|AF367366 Mesembryanthemum crystallinum putative potassium-sodium transporter
            mRNA, complete cds
          Length = 1904

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 454  tcagtgatgcaaattagcatgacaaagatagccaaataaga 494
            |||||||||||||  | ||| |||||||||||||| |||||
Sbjct: 1398 tcagtgatgcaaacaatcataacaaagatagccaagtaaga 1358
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>gb|AC115877.13| Mus musculus chromosome 15, clone RP24-358H21, complete sequence
          Length = 169136

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 511   cagtcctccaacaacccttt 530
             ||||||||||||||||||||
Sbjct: 69111 cagtcctccaacaacccttt 69092
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>ref|NM_117099.3| Arabidopsis thaliana HKT1 (HIGH-AFFINITY K+ TRANSPORTER 1); sodium
            ion transporter AT4G10310 (HKT1) mRNA, complete cds
          Length = 1685

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 373  acgtttccatatgcacttacaacttcga 400
            ||||||||||||||||| | ||||||||
Sbjct: 1346 acgtttccatatgcactgataacttcga 1319
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>gb|AC166800.5| Mus musculus chromosome 1, clone RP24-260I21, complete sequence
          Length = 162752

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   gctatctaagcttccatgct 207
             ||||||||||||||||||||
Sbjct: 78416 gctatctaagcttccatgct 78397
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>emb|AL032618.1|CEY42A5A Caenorhabditis elegans YAC Y42A5A, complete sequence
          Length = 22557

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  cagcaaacccatatgaagca 312
            ||||||||||||||||||||
Sbjct: 4802 cagcaaacccatatgaagca 4821
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>gb|AC118728.12| Mus musculus chromosome 1, clone RP24-168F13, complete sequence
          Length = 176970

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 188  gctatctaagcttccatgct 207
            ||||||||||||||||||||
Sbjct: 9390 gctatctaagcttccatgct 9371
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>emb|AL445569.1| Human DNA sequence from clone RP11-135M8 on chromosome 6 Contains the
            5' end of the KCNQ5 gene for potassium voltage-gated
            channel, KQT-like subfamily member 5, the 5' parts of two
            novel genes and a CpG island, complete sequence
          Length = 47057

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 400  aacagtatgctcaaaacatt 419
            ||||||||||||||||||||
Sbjct: 6493 aacagtatgctcaaaacatt 6512
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>gb|AC009509.7| Homo sapiens 12p11-37.2-54.4 BAC RP11-1060J15 (Roswell Park Cancer
              Institute Human BAC Library) complete sequence
          Length = 192690

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 528    ttttctgttgtatctcttct 547
              ||||||||||||||||||||
Sbjct: 130946 ttttctgttgtatctcttct 130965
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>gb|AC100843.2| Homo sapiens chromosome 18, clone RP11-640A1, complete sequence
          Length = 180160

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 474   gacaaagatagccaaataag 493
             ||||||||||||||||||||
Sbjct: 65246 gacaaagatagccaaataag 65265
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>emb|BX323050.6| Zebrafish DNA sequence from clone DKEYP-1G12 in linkage group 23,
             complete sequence
          Length = 56129

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   acagtatgctcaaaacattg 420
             ||||||||||||||||||||
Sbjct: 33661 acagtatgctcaaaacattg 33642
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>gb|AF298900.1|AF298900 Homo sapiens clone 390j15 chromosome 18 map 18q21, complete sequence
          Length = 180000

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 474    gacaaagatagccaaataag 493
              ||||||||||||||||||||
Sbjct: 136312 gacaaagatagccaaataag 136293
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>ref|NM_073420.1| Caenorhabditis elegans Y42A5A.2 (Y42A5A.2) mRNA, complete cds
          Length = 1923

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  cagcaaacccatatgaagca 312
            ||||||||||||||||||||
Sbjct: 1054 cagcaaacccatatgaagca 1035
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>emb|BX827043.1|CNS0A3C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB8ZD07 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1660

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 373  acgtttccatatgcacttacaacttcga 400
            ||||||||||||||||| | ||||||||
Sbjct: 1336 acgtttccatatgcactgataacttcga 1309
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>emb|BX826395.1|CNS0A3DM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB21ZB03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1663

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 373  acgtttccatatgcacttacaacttcga 400
            ||||||||||||||||| | ||||||||
Sbjct: 1333 acgtttccatatgcactgataacttcga 1306
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>gb|BT005751.1| Arabidopsis thaliana clone RAFL15-31-F16 (R50120) putative potassium
            uptake transporter (At4g10310) mRNA, complete cds
          Length = 1705

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 373  acgtttccatatgcacttacaacttcga 400
            ||||||||||||||||| | ||||||||
Sbjct: 1346 acgtttccatatgcactgataacttcga 1319
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>gb|AC161879.5| Mus musculus BAC clone RP23-264A15 from chromosome 1, complete sequence
          Length = 206995

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 426   aagtggatctgtggtcagtgcttc 449
             |||||||||| |||||||||||||
Sbjct: 99408 aagtggatctttggtcagtgcttc 99431


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,445,638
Number of Sequences: 3902068
Number of extensions: 5445638
Number of successful extensions: 102577
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102437
Number of HSP's gapped (non-prelim): 127
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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