>DBP4_NEUCR (Q7RZ35) ATP-dependent RNA helicase dbp-4 (EC 3.6.1.-)|
          Length = 823

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = -1

Query: 411 FEKIPGDGATQALFLLGTPSHQEAKKKGVKLLKQGCRCTMRHFVEQLPGDGSREKK 244
           F+K+  DG   +L L GTP  +  K + VK LK   R  M    +    DG   KK
Sbjct: 479 FDKLDLDGFASSLGLPGTPQIRYQKGEDVKKLKNASRAAMSSGSDTEGSDGEIRKK 534

>FA12_HUMAN (P00748) Coagulation factor XII precursor (EC 3.4.21.38) (Hageman|
           factor) (HAF) [Contains: Coagulation factor XIIa heavy
           chain; Beta-factor XIIa part 1; Beta-factor XIIa part 2;
           Coagulation factor XIIa light chain]
          Length = 615

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 52  HSNAQKGNSCTNHQT-PHYVHPCDSPGRRKKGKEKTFSPYILHLHYK 189
           HS  QKG +C N  + PH + P    G   + KEK F P +L   +K
Sbjct: 101 HSPCQKGGTCVNMPSGPHCLCPQHLTGNHCQ-KEKCFEPQLLRFFHK 146

>ITIH2_MOUSE (Q61703) Inter-alpha-trypsin inhibitor heavy chain H2 precursor|
           (ITI heavy chain H2) (Inter-alpha-inhibitor heavy chain
           2)
          Length = 946

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 377 AWVAPSPGIFSKLVLLGALQLQQTPPRH 460
           +W  PSP   S ++ +GA  L+ TPP H
Sbjct: 668 SWANPSPTPMSAMLAVGAKPLESTPPTH 695

>ETFD_HUMAN (Q16134) Electron transfer flavoprotein-ubiquinone oxidoreductase,|
           mitochondrial precursor (EC 1.5.5.1) (ETF-QO)
           (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase)
           (Electron-transferring-flavoprotein dehydrogenase)
          Length = 617

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
 Frame = -3

Query: 460 MARRSLLKLQCSQEYEL*KN-----TWRWSHPGSV---SSWYTIPPRGKEKRCEAL 317
           +A+ S L  QC    ++ KN       RWS   +V   ++ YTI PR K+KR E +
Sbjct: 5   LAKLSCLAYQCFHALKIKKNYLPLCAIRWSSTSTVPRITTHYTIYPRDKDKRWEGV 60

>ITIH2_MESAU (P97279) Inter-alpha-trypsin inhibitor heavy chain H2 precursor|
           (ITI heavy chain H2) (Inter-alpha-inhibitor heavy chain
           2) (HC2)
          Length = 946

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 377 AWVAPSPGIFSKLVLLGALQLQQTPPRHAM 466
           +W +PSP     ++ +GA +L+ TPP H +
Sbjct: 668 SWASPSPTPVMAMLAVGANRLESTPPPHVI 697

>ITIH2_HUMAN (P19823) Inter-alpha-trypsin inhibitor heavy chain H2 precursor|
           (ITI heavy chain H2) (Inter-alpha-inhibitor heavy chain
           2) (Inter-alpha-trypsin inhibitor complex component II)
           (Serum-derived hyaluronan-associated protein) (SHAP)
          Length = 946

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 359 VPRRNRAWVAPSPGIFSKLVLLGALQLQQTPPRHAM 466
           VP    +W  PSP     ++  G+  L+ TPP H M
Sbjct: 662 VPDSTPSWANPSPTPVISMLAQGSQVLESTPPPHVM 697

>KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 408

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 39  AQKNTFKCTKGKFLHKPPNTSLCTPMRFPGKKEKRKGKNFLSLH 170
           + ++  KC +   + KPP  + C P R  G  E++  + FL +H
Sbjct: 21  SSESALKCRRHLAVTKPPPQAACWPARPSGAAERKFLEKFLRVH 64

>PSAB_SYNP6 (Q5N0D5) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
          Length = 734

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 13/76 (17%)
 Frame = +3

Query: 237 WRPFFHANHLQEVAQQNAASCICIPVSRASHLF---SLPLGGMVYQEETE---------- 377
           W P F    +    Q  A+S + +  S   H +    +   G +YQ              
Sbjct: 92  WDPHFGQGAIDAFTQAGASSPVNVAYSGVYHWWYTIGMRTNGDLYQGSIFLLILSALFLF 151

Query: 378 PGWLHLQVFFQSSYSW 425
            GWLHLQ  F+ S SW
Sbjct: 152 AGWLHLQPKFRPSLSW 167

>PHYA_ORYSA (P10931) Phytochrome A|
          Length = 1128

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 252 HANHLQEVAQQNAASCICIPVSRASHLFSLPLGGMVYQEE 371
           HA H+Q+ +QQNA + +    S   H  + PL GM+Y  +
Sbjct: 883 HALHVQQASQQNALTKL-KAYSYMRHAINNPLSGMLYSRK 921

>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
 Frame = +2

Query: 197 DVGRTGTCG*RMRLAAFFSR---EPSPGSCSTKCRIVHLHPCFKSFTPFFFASWWD---- 355
           +VGR G  G   R A+  +R   +P P S + K R   +            A+W      
Sbjct: 590 EVGRNGNPGRERRPASAMARGDLDPGPESSAQKRRRTEME----------VAAWVRESLL 639

Query: 356 GVPRRNRAWVAPSPG 400
           G PRR+ A +AP PG
Sbjct: 640 GTPRRSSAALAPQPG 654


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,649,829
Number of Sequences: 219361
Number of extensions: 2188335
Number of successful extensions: 5805
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5802
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)