ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal8l22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_482982.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2130 Score = 472 bits (238), Expect = e-130 Identities = 436/502 (86%) Strand = Plus / Minus Query: 222 acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 281 ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 1916 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 1857 Query: 282 gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 341 |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| |||| Sbjct: 1856 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 1797 Query: 342 caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctg 401 |||||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| | | Sbjct: 1796 caaccttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtag 1737 Query: 402 ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 461 | || |||| |||||| ||||| |||||||| || || || |||| |||||||| || | Sbjct: 1736 tagggacagcggaaaggtctgctaatttctggttaaatttagtgagttgatcaacagcat 1677 Query: 462 cattcccaaccaatgcctctcccacaaataagaccagatctggcttgttgagattgatga 521 |||| ||||||||||| || || |||||||| || |||||||| | ||||||||||||| Sbjct: 1676 cattaccaaccaatgcttccccaacaaataaaactagatctgggctattgagattgatga 1617 Query: 522 gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 581 ||||||||||||||||||| ||||||||||||||||||||||| ||||| || || |||| Sbjct: 1616 gcttggagagtgctctcatgagtggctcattatcctgcatacgtccagcagtgtcgacaa 1557 Query: 582 gaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccacaactgctg 641 ||||||||||||| || || || || |||||||| ||||| || ||||| ||||| |||| Sbjct: 1556 gaacaacatctgacttattacgagtagcttcctgaatagcctcctttgcgacaaccgctg 1497 Query: 642 ggtccttctcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtccgca 701 | || || ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1496 gatctttttcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtacgca 1437 Query: 702 gctgctcaacagcaccagatct 723 | |||||||||||||||||||| Sbjct: 1436 gttgctcaacagcaccagatct 1415
>ref|XM_482983.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2332 Score = 472 bits (238), Expect = e-130 Identities = 436/502 (86%) Strand = Plus / Minus Query: 222 acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 281 ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 2026 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 1967 Query: 282 gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 341 |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| |||| Sbjct: 1966 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 1907 Query: 342 caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctg 401 |||||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| | | Sbjct: 1906 caaccttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtag 1847 Query: 402 ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 461 | || |||| |||||| ||||| |||||||| || || || |||| |||||||| || | Sbjct: 1846 tagggacagcggaaaggtctgctaatttctggttaaatttagtgagttgatcaacagcat 1787 Query: 462 cattcccaaccaatgcctctcccacaaataagaccagatctggcttgttgagattgatga 521 |||| ||||||||||| || || |||||||| || |||||||| | ||||||||||||| Sbjct: 1786 cattaccaaccaatgcttccccaacaaataaaactagatctgggctattgagattgatga 1727 Query: 522 gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 581 ||||||||||||||||||| ||||||||||||||||||||||| ||||| || || |||| Sbjct: 1726 gcttggagagtgctctcatgagtggctcattatcctgcatacgtccagcagtgtcgacaa 1667 Query: 582 gaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccacaactgctg 641 ||||||||||||| || || || || |||||||| ||||| || ||||| ||||| |||| Sbjct: 1666 gaacaacatctgacttattacgagtagcttcctgaatagcctcctttgcgacaaccgctg 1607 Query: 642 ggtccttctcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtccgca 701 | || || ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1606 gatctttttcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtacgca 1547 Query: 702 gctgctcaacagcaccagatct 723 | |||||||||||||||||||| Sbjct: 1546 gttgctcaacagcaccagatct 1525
>dbj|AK101591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051D02, full insert sequence Length = 2331 Score = 472 bits (238), Expect = e-130 Identities = 436/502 (86%) Strand = Plus / Minus Query: 222 acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 281 ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 2025 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 1966 Query: 282 gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 341 |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| |||| Sbjct: 1965 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 1906 Query: 342 caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctg 401 |||||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| | | Sbjct: 1905 caaccttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtag 1846 Query: 402 ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 461 | || |||| |||||| ||||| |||||||| || || || |||| |||||||| || | Sbjct: 1845 tagggacagcggaaaggtctgctaatttctggttaaatttagtgagttgatcaacagcat 1786 Query: 462 cattcccaaccaatgcctctcccacaaataagaccagatctggcttgttgagattgatga 521 |||| ||||||||||| || || |||||||| || |||||||| | ||||||||||||| Sbjct: 1785 cattaccaaccaatgcttccccaacaaataaaactagatctgggctattgagattgatga 1726 Query: 522 gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 581 ||||||||||||||||||| ||||||||||||||||||||||| ||||| || || |||| Sbjct: 1725 gcttggagagtgctctcatgagtggctcattatcctgcatacgtccagcagtgtcgacaa 1666 Query: 582 gaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccacaactgctg 641 ||||||||||||| || || || || |||||||| ||||| || ||||| ||||| |||| Sbjct: 1665 gaacaacatctgacttattacgagtagcttcctgaatagcctcctttgcgacaaccgctg 1606 Query: 642 ggtccttctcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtccgca 701 | || || ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1605 gatctttttcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtacgca 1546 Query: 702 gctgctcaacagcaccagatct 723 | |||||||||||||||||||| Sbjct: 1545 gttgctcaacagcaccagatct 1524
>dbj|AK065513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033N04, full insert sequence Length = 2130 Score = 472 bits (238), Expect = e-130 Identities = 436/502 (86%) Strand = Plus / Minus Query: 222 acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 281 ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 1916 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 1857 Query: 282 gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 341 |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| |||| Sbjct: 1856 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 1797 Query: 342 caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctg 401 |||||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| | | Sbjct: 1796 caaccttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtag 1737 Query: 402 ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 461 | || |||| |||||| ||||| |||||||| || || || |||| |||||||| || | Sbjct: 1736 tagggacagcggaaaggtctgctaatttctggttaaatttagtgagttgatcaacagcat 1677 Query: 462 cattcccaaccaatgcctctcccacaaataagaccagatctggcttgttgagattgatga 521 |||| ||||||||||| || || |||||||| || |||||||| | ||||||||||||| Sbjct: 1676 cattaccaaccaatgcttccccaacaaataaaactagatctgggctattgagattgatga 1617 Query: 522 gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 581 ||||||||||||||||||| ||||||||||||||||||||||| ||||| || || |||| Sbjct: 1616 gcttggagagtgctctcatgagtggctcattatcctgcatacgtccagcagtgtcgacaa 1557 Query: 582 gaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccacaactgctg 641 ||||||||||||| || || || || |||||||| ||||| || ||||| ||||| |||| Sbjct: 1556 gaacaacatctgacttattacgagtagcttcctgaatagcctcctttgcgacaaccgctg 1497 Query: 642 ggtccttctcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtccgca 701 | || || ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1496 gatctttttcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtacgca 1437 Query: 702 gctgctcaacagcaccagatct 723 | |||||||||||||||||||| Sbjct: 1436 gttgctcaacagcaccagatct 1415
>gb|AY103682.1| Zea mays PCO122909 mRNA sequence Length = 1641 Score = 472 bits (238), Expect = e-130 Identities = 436/502 (86%) Strand = Plus / Minus Query: 222 acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 281 ||||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1382 acttcaggagggtcttcacaatggatttcacgttcagcttcttcaggtccgtgtaggact 1323 Query: 282 gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 341 |||| || || ||||||||||| |||| |||||||||||| |||||||| || || |||| Sbjct: 1322 gaccacagccaacgaacatgactggagctccagatatgtagaccatggaaagcgctgctc 1263 Query: 342 caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctg 401 |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| | Sbjct: 1262 caaccttgtcgtcgatggtgtcaaacttggtgagcaggataccatcgatcaatctagcag 1203 Query: 402 ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 461 | ||||||| || || ||||| | |||||| || || || |||||||||| || || | Sbjct: 1202 tgggaacagcagataggtctgctagtttctggttaaatttagtgagctgatccacagcat 1143 Query: 462 cattcccaaccaatgcctctcccacaaataagaccagatctggcttgttgagattgatga 521 |||| ||||||||||| ||||| |||||||| ||||| ||||| | ||||||||||| | Sbjct: 1142 catttccaaccaatgcttctccaacaaataaaaccaggtctgggctattgagattgatta 1083 Query: 522 gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 581 ||||||||||||| ||||| |||||||| || ||||||||||| ||||| || ||||| | Sbjct: 1082 gcttggagagtgccctcatgagtggctcgttgtcctgcatacgtccagcagtgtcaacca 1023 Query: 582 gaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccacaactgctg 641 ||||||||||||||||||| ||||| |||||||| ||||| || | || |||||||| | Sbjct: 1022 gaacaacatctgatttgttccgggttgcttcctgaatagcctccctcgctacaactgccg 963 Query: 642 ggtccttctcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtccgca 701 | || |||||||| ||||||||||||||||||||||||||||| | |||||||| | || Sbjct: 962 gatctttctcataacccttctcaaatataggtatctgaagcctccttgcatgagttctca 903 Query: 702 gctgctcaacagcaccagatct 723 |||||||||||||||||||||| Sbjct: 902 gctgctcaacagcaccagatct 881
>ref|NM_119206.3| Arabidopsis thaliana GTP binding / GTPase/ RNA binding / nucleoside-triphosphatase/ nucleotide binding / signal recognition particle binding AT4G30600 mRNA, complete cds Length = 2248 Score = 170 bits (86), Expect = 4e-39 Identities = 242/294 (82%) Strand = Plus / Minus Query: 427 tttctgattgaacttgttgagctgatcaactgcgtcattcccaaccaatgcctctcccac 486 ||||||||||||||| |||||| || ||||| || || ||||| | || || || || Sbjct: 1800 tttctgattgaacttcgagagctggtctactgcatcgtttccaacaagagcttcaccaac 1741 Query: 487 aaataagaccagatctggcttgttgagattgatgagcttggagagtgctctcatcagtgg 546 ||| ||||||| || |||| || || ||||||||||| |||||||||||||||| || Sbjct: 1740 aaacaagaccaagtccggctgattaaggttgatgagctttgagagtgctctcatcaaagg 1681 Query: 547 ctcattatcctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggt 606 |||||||||||||| |||||||| || ||||||||||||||||| ||| ||||| || Sbjct: 1680 ttcattatcctgcatccgaccagctgtgtcaacaagaacaacatcggatccatttcgagt 1621 Query: 607 ggcttcctggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaa 666 ||||| || || |||||||| || || |||||||| ||||| ||||| ||||| ||||| Sbjct: 1620 tgcttcttgtatggcttctttagcaactactgctggatccttttcataacccttttcaaa 1561 Query: 667 tataggtatctgaagcctgcgagcatgagtccgcagctgctcaacagcaccaga 720 ||| |||||||| | ||| |||||||||||||| | |||||||||||| ||||| Sbjct: 1560 tatcggtatctgtaacctacgagcatgagtccgtaactgctcaacagctccaga 1507 Score = 111 bits (56), Expect = 3e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 233 gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 292 ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || Sbjct: 1994 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 1935 Query: 293 acgaacatgaccggagatccagatatgtaaaccatggacagtgcggctccaaccttgtca 352 |||||||| ||||| ||||| |||||||||||||| |||| || ||||| |||||||| Sbjct: 1934 acgaacataaccggtgatcccgatatgtaaaccatagacaacgctgctccgaccttgtcg 1875 Query: 353 tcgatagtgtcaaacttggtgagcaggataccatcgatcagtct 396 || || || |||||||| || || | ||| |||||||||||||| Sbjct: 1874 tcaatggtatcaaactttgtaagtaagattccatcgatcagtct 1831
>gb|AY133612.1| Arabidopsis thaliana AT4g30600/F17I23_60 mRNA, complete cds Length = 1905 Score = 170 bits (86), Expect = 4e-39 Identities = 242/294 (82%) Strand = Plus / Minus Query: 427 tttctgattgaacttgttgagctgatcaactgcgtcattcccaaccaatgcctctcccac 486 ||||||||||||||| |||||| || ||||| || || ||||| | || || || || Sbjct: 1698 tttctgattgaacttcgagagctggtctactgcatcgtttccaacaagagcttcaccaac 1639 Query: 487 aaataagaccagatctggcttgttgagattgatgagcttggagagtgctctcatcagtgg 546 ||| ||||||| || |||| || || ||||||||||| |||||||||||||||| || Sbjct: 1638 aaacaagaccaagtccggctgattaaggttgatgagctttgagagtgctctcatcaaagg 1579 Query: 547 ctcattatcctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggt 606 |||||||||||||| |||||||| || ||||||||||||||||| ||| ||||| || Sbjct: 1578 ttcattatcctgcatccgaccagctgtgtcaacaagaacaacatcggatccatttcgagt 1519 Query: 607 ggcttcctggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaa 666 ||||| || || |||||||| || || |||||||| ||||| ||||| ||||| ||||| Sbjct: 1518 tgcttcttgtatggcttctttagcaactactgctggatccttttcataacccttttcaaa 1459 Query: 667 tataggtatctgaagcctgcgagcatgagtccgcagctgctcaacagcaccaga 720 ||| |||||||| | ||| |||||||||||||| | |||||||||||| ||||| Sbjct: 1458 tatcggtatctgtaacctacgagcatgagtccgtaactgctcaacagctccaga 1405 Score = 111 bits (56), Expect = 3e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 233 gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 292 ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || Sbjct: 1892 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 1833 Query: 293 acgaacatgaccggagatccagatatgtaaaccatggacagtgcggctccaaccttgtca 352 |||||||| ||||| ||||| |||||||||||||| |||| || ||||| |||||||| Sbjct: 1832 acgaacataaccggtgatcccgatatgtaaaccatagacaacgctgctccgaccttgtcg 1773 Query: 353 tcgatagtgtcaaacttggtgagcaggataccatcgatcagtct 396 || || || |||||||| || || | ||| |||||||||||||| Sbjct: 1772 tcaatggtatcaaactttgtaagtaagattccatcgatcagtct 1729
>gb|AY065066.1| Arabidopsis thaliana AT4g30600/F17I23_60 mRNA, complete cds Length = 2265 Score = 170 bits (86), Expect = 4e-39 Identities = 242/294 (82%) Strand = Plus / Minus Query: 427 tttctgattgaacttgttgagctgatcaactgcgtcattcccaaccaatgcctctcccac 486 ||||||||||||||| |||||| || ||||| || || ||||| | || || || || Sbjct: 1832 tttctgattgaacttcgagagctggtctactgcatcgtttccaacaagagcttcaccaac 1773 Query: 487 aaataagaccagatctggcttgttgagattgatgagcttggagagtgctctcatcagtgg 546 ||| ||||||| || |||| || || ||||||||||| |||||||||||||||| || Sbjct: 1772 aaacaagaccaagtccggctgattaaggttgatgagctttgagagtgctctcatcaaagg 1713 Query: 547 ctcattatcctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggt 606 |||||||||||||| |||||||| || ||||||||||||||||| ||| ||||| || Sbjct: 1712 ttcattatcctgcatccgaccagctgtgtcaacaagaacaacatcggatccatttcgagt 1653 Query: 607 ggcttcctggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaa 666 ||||| || || |||||||| || || |||||||| ||||| ||||| ||||| ||||| Sbjct: 1652 tgcttcttgtatggcttctttagcaactactgctggatccttttcataacccttttcaaa 1593 Query: 667 tataggtatctgaagcctgcgagcatgagtccgcagctgctcaacagcaccaga 720 ||| |||||||| | ||| |||||||||||||| | |||||||||||| ||||| Sbjct: 1592 tatcggtatctgtaacctacgagcatgagtccgtaactgctcaacagctccaga 1539 Score = 111 bits (56), Expect = 3e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 233 gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 292 ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || Sbjct: 2026 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 1967 Query: 293 acgaacatgaccggagatccagatatgtaaaccatggacagtgcggctccaaccttgtca 352 |||||||| ||||| ||||| |||||||||||||| |||| || ||||| |||||||| Sbjct: 1966 acgaacataaccggtgatcccgatatgtaaaccatagacaacgctgctccgaccttgtcg 1907 Query: 353 tcgatagtgtcaaacttggtgagcaggataccatcgatcagtct 396 || || || |||||||| || || | ||| |||||||||||||| Sbjct: 1906 tcaatggtatcaaactttgtaagtaagattccatcgatcagtct 1863
>gb|AY372539.1| Cucumis sativus signal recognition particle receptor protein mRNA, partial cds Length = 1128 Score = 147 bits (74), Expect = 6e-32 Identities = 221/270 (81%) Strand = Plus / Minus Query: 427 tttctgattgaacttgttgagctgatcaactgcgtcattcccaaccaatgcctctcccac 486 ||||||||||||||| || ||||| || || ||||||||||| | ||||| || || Sbjct: 735 tttctgattgaacttcgaaagttgatcgacagcatcattcccaacgagggcctccccaac 676 Query: 487 aaataagaccagatctggcttgttgagattgatgagcttggagagtgctctcatcagtgg 546 || ||||| ||||| || |||| || ||||| ||||| ||||| |||||||| ||||| Sbjct: 675 gaacaagacaagatccggactgttaaggttgataagctttgagagagctctcatgagtgg 616 Query: 547 ctcattatcctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggt 606 |||||||||||||| | ||||| |||||||||||||| ||||||||| ||| |||| Sbjct: 615 ttcattatcctgcattctcccagctgtatcaacaagaactacatctgatccgttgcggga 556 Query: 607 ggcttcctggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaa 666 || || ||||| |||||||| || ||||| || || || |||||||| ||||||||||| Sbjct: 555 tgcctcttggattgcttctttagctacaaccgcaggatctttctcataacccttctcaaa 496 Query: 667 tataggtatctgaagcctgcgagcatgagt 696 |||||| |||||||| || ||||||||||| Sbjct: 495 tatagggatctgaagtctacgagcatgagt 466 Score = 131 bits (66), Expect = 4e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 239 acgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccgacgaac 298 ||||| ||||| ||||| |||||||| ||||| || || ||||| || || ||||||||| Sbjct: 923 acgattgatttgacattgagcttcttgaggtcggtatatgactgtccacagccgacgaac 864 Query: 299 atgaccggagatccagatatgtaaaccatggacagtgcggctccaaccttgtcatcgata 358 || ||||| | |||||||||||| ||||| |||| ||| |||||||||||||| ||||| Sbjct: 863 attaccggtgctccagatatgtagaccatagacaatgctgctccaaccttgtcgtcgatg 804 Query: 359 gtgtcaaacttggtgagcaggataccatcgatcagtct 396 ||||| ||||| ||||||| ||||||||| |||||||| Sbjct: 803 gtgtcgaactttgtgagcaagataccatcaatcagtct 766
>emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 73 Length = 194862 Score = 135 bits (68), Expect = 2e-28 Identities = 140/164 (85%) Strand = Plus / Plus Query: 515 ttgatgagcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgta 574 ||||||||||| |||||||||||||||| || |||||||||||||| |||||||| || Sbjct: 84327 ttgatgagctttgagagtgctctcatcaaaggttcattatcctgcatccgaccagctgtg 84386 Query: 575 tcaacaagaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccaca 634 ||||||||||||||||| ||| ||||| || ||||| || || |||||||| || || Sbjct: 84387 tcaacaagaacaacatcggatccatttcgagttgcttcttgtatggcttctttagcaact 84446 Query: 635 actgctgggtccttctcatatcccttctcaaatataggtatctg 678 |||||||| ||||| ||||| ||||| |||||||| |||||||| Sbjct: 84447 actgctggatccttttcataacccttttcaaatatcggtatctg 84490 Score = 87.7 bits (44), Expect = 5e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 233 gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 292 ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || Sbjct: 83882 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 83941 Query: 293 acgaacatgaccggagatccagatatgtaaaccatggaca 332 |||||||| ||||| ||||| |||||||||||||| |||| Sbjct: 83942 acgaacataaccggtgatcccgatatgtaaaccatagaca 83981 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 686 cgagcatgagtccgcagctgctcaacagcaccaga 720 |||||||||||||| | |||||||||||| ||||| Sbjct: 84605 cgagcatgagtccgtaactgctcaacagctccaga 84639
>gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23 Length = 134784 Score = 135 bits (68), Expect = 2e-28 Identities = 140/164 (85%) Strand = Plus / Minus Query: 515 ttgatgagcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgta 574 ||||||||||| |||||||||||||||| || |||||||||||||| |||||||| || Sbjct: 16990 ttgatgagctttgagagtgctctcatcaaaggttcattatcctgcatccgaccagctgtg 16931 Query: 575 tcaacaagaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccaca 634 ||||||||||||||||| ||| ||||| || ||||| || || |||||||| || || Sbjct: 16930 tcaacaagaacaacatcggatccatttcgagttgcttcttgtatggcttctttagcaact 16871 Query: 635 actgctgggtccttctcatatcccttctcaaatataggtatctg 678 |||||||| ||||| ||||| ||||| |||||||| |||||||| Sbjct: 16870 actgctggatccttttcataacccttttcaaatatcggtatctg 16827 Score = 87.7 bits (44), Expect = 5e-14 Identities = 86/100 (86%) Strand = Plus / Minus Query: 233 gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 292 ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || Sbjct: 17435 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 17376 Query: 293 acgaacatgaccggagatccagatatgtaaaccatggaca 332 |||||||| ||||| ||||| |||||||||||||| |||| Sbjct: 17375 acgaacataaccggtgatcccgatatgtaaaccatagaca 17336 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 686 cgagcatgagtccgcagctgctcaacagcaccaga 720 |||||||||||||| | |||||||||||| ||||| Sbjct: 16712 cgagcatgagtccgtaactgctcaacagctccaga 16678
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 125 bits (63), Expect = 2e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 444 tgagctgatcaactgcgtcattcccaaccaatgcctctcccacaaataagaccagatctg 503 |||| |||||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 23711381 tgagttgatcaacagcatcattaccaaccaatgcttccccaacaaataaaactagatctg 23711440 Query: 504 gcttgttgagattgatgagcttggagagtgctctcatcagtggctcattatcctg 558 | | |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 23711441 ggctattgagattgatgagcttggagagtgctctcatgagtggctcattatcctg 23711495 Score = 123 bits (62), Expect = 9e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 222 acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 281 ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 23710827 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 23710886 Query: 282 gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 341 |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| |||| Sbjct: 23710887 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 23710946 Query: 342 caacct 347 |||||| Sbjct: 23710947 caacct 23710952 Score = 111 bits (56), Expect = 3e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 555 cctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggtggcttcct 614 |||||||||| ||||| || || ||||||||||||||||| || || || || ||||||| Sbjct: 23711592 cctgcatacgtccagcagtgtcgacaagaacaacatctgacttattacgagtagcttcct 23711651 Query: 615 ggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaatataggta 674 | ||||| || ||||| ||||| ||||| || || ||||||||||||||||||||||||| Sbjct: 23711652 gaatagcctcctttgcgacaaccgctggatctttttcatatcccttctcaaatataggta 23711711 Query: 675 tctg 678 |||| Sbjct: 23711712 tctg 23711715 Score = 79.8 bits (40), Expect = 1e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 676 ctgaagcctgcgagcatgagtccgcagctgctcaacagcaccagatct 723 ||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 23712046 ctgaagcctgcgagcatgagtacgcagttgctcaacagcaccagatct 23712093 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 344 accttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctgtt 403 |||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| | || Sbjct: 23711035 accttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtagta 23711094 Query: 404 ggaacagtggaaagatctgccaatttctg 432 || |||| |||||| ||||| |||||||| Sbjct: 23711095 gggacagcggaaaggtctgctaatttctg 23711123
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0092C08 Length = 131049 Score = 125 bits (63), Expect = 2e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 444 tgagctgatcaactgcgtcattcccaaccaatgcctctcccacaaataagaccagatctg 503 |||| |||||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 581 tgagttgatcaacagcatcattaccaaccaatgcttccccaacaaataaaactagatctg 640 Query: 504 gcttgttgagattgatgagcttggagagtgctctcatcagtggctcattatcctg 558 | | |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 641 ggctattgagattgatgagcttggagagtgctctcatgagtggctcattatcctg 695 Score = 123 bits (62), Expect = 9e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 222 acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 281 ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 27 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 86 Query: 282 gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 341 |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| |||| Sbjct: 87 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 146 Query: 342 caacct 347 |||||| Sbjct: 147 caacct 152 Score = 111 bits (56), Expect = 3e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 555 cctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggtggcttcct 614 |||||||||| ||||| || || ||||||||||||||||| || || || || ||||||| Sbjct: 792 cctgcatacgtccagcagtgtcgacaagaacaacatctgacttattacgagtagcttcct 851 Query: 615 ggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaatataggta 674 | ||||| || ||||| ||||| ||||| || || ||||||||||||||||||||||||| Sbjct: 852 gaatagcctcctttgcgacaaccgctggatctttttcatatcccttctcaaatataggta 911 Query: 675 tctg 678 |||| Sbjct: 912 tctg 915 Score = 79.8 bits (40), Expect = 1e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 676 ctgaagcctgcgagcatgagtccgcagctgctcaacagcaccagatct 723 ||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1246 ctgaagcctgcgagcatgagtacgcagttgctcaacagcaccagatct 1293 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 344 accttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctgtt 403 |||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| | || Sbjct: 235 accttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtagta 294 Query: 404 ggaacagtggaaagatctgccaatttctg 432 || |||| |||||| ||||| |||||||| Sbjct: 295 gggacagcggaaaggtctgctaatttctg 323
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 125 bits (63), Expect = 2e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 444 tgagctgatcaactgcgtcattcccaaccaatgcctctcccacaaataagaccagatctg 503 |||| |||||||| || ||||| ||||||||||| || || |||||||| || ||||||| Sbjct: 118977 tgagttgatcaacagcatcattaccaaccaatgcttccccaacaaataaaactagatctg 119036 Query: 504 gcttgttgagattgatgagcttggagagtgctctcatcagtggctcattatcctg 558 | | |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119037 ggctattgagattgatgagcttggagagtgctctcatgagtggctcattatcctg 119091 Score = 123 bits (62), Expect = 9e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 222 acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 281 ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 118423 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 118482 Query: 282 gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 341 |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| |||| Sbjct: 118483 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 118542 Query: 342 caacct 347 |||||| Sbjct: 118543 caacct 118548 Score = 111 bits (56), Expect = 3e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 555 cctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggtggcttcct 614 |||||||||| ||||| || || ||||||||||||||||| || || || || ||||||| Sbjct: 119188 cctgcatacgtccagcagtgtcgacaagaacaacatctgacttattacgagtagcttcct 119247 Query: 615 ggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaatataggta 674 | ||||| || ||||| ||||| ||||| || || ||||||||||||||||||||||||| Sbjct: 119248 gaatagcctcctttgcgacaaccgctggatctttttcatatcccttctcaaatataggta 119307 Query: 675 tctg 678 |||| Sbjct: 119308 tctg 119311 Score = 79.8 bits (40), Expect = 1e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 676 ctgaagcctgcgagcatgagtccgcagctgctcaacagcaccagatct 723 ||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 119642 ctgaagcctgcgagcatgagtacgcagttgctcaacagcaccagatct 119689 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 344 accttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctgtt 403 |||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| | || Sbjct: 118631 accttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtagta 118690 Query: 404 ggaacagtggaaagatctgccaatttctg 432 || |||| |||||| ||||| |||||||| Sbjct: 118691 gggacagcggaaaggtctgctaatttctg 118719
>gb|AC136953.17| Medicago truncatula clone mth2-20h6, complete sequence Length = 94019 Score = 93.7 bits (47), Expect = 8e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 233 gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 292 |||||||| ||||| || || || || ||||| |||||||| |||||||| |||||||| Sbjct: 21137 gtcttcacaatggacttgacgttgagtttcttgaggtcagtataggactgtccgcatccc 21078 Query: 293 acgaacatgaccggagatccagatatgtaaaccatggacagtgcggctccaacct 347 || |||||||| |||| |||||||||||||||||| || ||||| ||||| |||| Sbjct: 21077 acaaacatgactggagctccagatatgtaaaccattgaaagtgcagctcccacct 21023 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 446 agctgatcaactgcgtcattcccaaccaatgcctctcccacaaataagaccagatctggc 505 |||||||||||||| ||||| ||||||| ||| ||||| ||||||||||| || || || Sbjct: 20567 agctgatcaactgcatcattgccaaccagtgcttctccaacaaataagacaaggtcagga 20508 Query: 506 ttgttgagattgatgagcttggagagtgctctcatcagtggctcattatcctg 558 ||||| || | ||| ||||| || ||||||||||||| ||| ||||||||||| Sbjct: 20507 ttgttaaggtagatcagctttgacagtgctctcatcaatggttcattatcctg 20455 Score = 75.8 bits (38), Expect = 2e-10 Identities = 104/126 (82%) Strand = Plus / Minus Query: 555 cctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggtggcttcct 614 |||||||||||||||| ||||| || || |||||||| || || || | ||||||| Sbjct: 19777 cctgcatacgaccagctgtatcgactagcacaacatccgaaccattccgtgaagcttcct 19718 Query: 615 ggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaatataggta 674 | || ||||||||||||||||| || || || || ||||| ||||||||||||||||| | Sbjct: 19717 gaattgcttcttttgccacaacagcaggatctttttcataacccttctcaaatataggga 19658 Query: 675 tctgaa 680 |||||| Sbjct: 19657 tctgaa 19652 Score = 54.0 bits (27), Expect = 7e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 676 ctgaagcctgcgagcatgagtccgcagctgctcaacagc 714 |||||| ||||| ||||||||||||| |||||||||||| Sbjct: 19571 ctgaagtctgcgtgcatgagtccgcaactgctcaacagc 19533 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 344 accttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatca 392 ||||| ||||| |||||||||||||| ||||||| ||| ||||| |||| Sbjct: 20772 accttatcatcaatagtgtcaaactttgtgagcaagatcccatcaatca 20724
>emb|AJ293426.1|BOL293426 Brassica oleracea partial mRNA for hypothetical protein, clone LSC815, differential screening experiment Length = 300 Score = 85.7 bits (43), Expect = 2e-13 Identities = 100/119 (84%) Strand = Plus / Minus Query: 251 acattcagcttcttcaggtcagtgtaggactgaccgcatccgacgaacatgaccggagat 310 ||||| |||||||||||||||||||| ||||| || || || |||||||| ||||| | | Sbjct: 183 acattgagcttcttcaggtcagtgtaagactggccacaacccacgaacataaccggtgct 124 Query: 311 ccagatatgtaaaccatggacagtgcggctccaaccttgtcatcgatagtgtcaaactt 369 || |||||||||||||| || | ||| ||||||||||| || || || || |||||||| Sbjct: 123 cccgatatgtaaaccatcgataatgctgctccaaccttatcgtcaatggtatcaaactt 65
>ref|XM_684658.1| PREDICTED: Danio rerio similar to signal recognition particle receptor (docking protein) (LOC561252), partial mRNA Length = 1125 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 338 gctccaaccttgtcatcgatagtgtcaaacttggtgag 375 ||||| ||||||||||| |||||||||||||||||||| Sbjct: 107 gctcccaccttgtcatcaatagtgtcaaacttggtgag 70
>ref|XM_692426.1| PREDICTED: Danio rerio similar to signal recognition particle receptor (docking protein) (LOC569063), mRNA Length = 1587 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 338 gctccaaccttgtcatcgatagtgtcaaacttggtgag 375 ||||| ||||||||||| |||||||||||||||||||| Sbjct: 569 gctcccaccttgtcatcaatagtgtcaaacttggtgag 532
>ref|XM_947200.1| Theileria annulata strain Ankara signal recognition particle receptor subunit alpha (TA13100) partial mRNA Length = 1644 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 538 catcagtggctcattatcctgcatacgaccagccgtatcaa 578 ||||| |||||||||||||||||||||||| || ||||||| Sbjct: 1338 catcaatggctcattatcctgcatacgacccgctgtatcaa 1298 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 323 accatggacagtgcggctccaaccttgtcatc 354 |||||||| ||||||||||||||||||||||| Sbjct: 1541 accatggatagtgcggctccaaccttgtcatc 1510
>ref|XM_792097.1| PREDICTED: Strongylocentrotus purpuratus similar to signal recognition particle receptor (docking protein) (LOC592583), partial mRNA Length = 1674 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Minus Query: 434 ttgaacttgttgagctgatcaactgcgtcattcccaaccaatgcctctcccacaaataag 493 ||||||||| |||||||||| || || || ||||| |||| |||||||| ||||| | Sbjct: 1586 ttgaacttggtgagctgatccacagcctcgttccctaccagagcctctccaacaaacagc 1527 Query: 494 accagatctggcttgttgagattgatgagcttggagagtgctctcatcagtggctcatta 553 ||||| ||||| || | ||||| | |||||||||||| ||||| |||||||| || Sbjct: 1526 accaggtctggacgattcaccttgatcaacttggagagtgccctcatgagtggctcgttg 1467 Query: 554 tcctgcatacgaccagc 570 |||||||| |||||||| Sbjct: 1466 tcctgcattcgaccagc 1450 Score = 44.1 bits (22), Expect = 0.63 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttgtcatcgatagtgtcaaacttggtgag 375 ||||||||| || ||||||||||||||||| Sbjct: 1674 cttgtcatcaatggtgtcaaacttggtgag 1645
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 557 tgcatacgaccagccgtatcaacaagaacaacatct 592 |||| |||||||||||||||||||| |||||||||| Sbjct: 1128558 tgcaaacgaccagccgtatcaacaataacaacatct 1128593
>emb|AJ851760.1| Gallus gallus mRNA for hypothetical protein, clone 28a6 Length = 3102 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 344 accttgtcatcgatagtgtcaaacttggtgagca 377 |||||||||||||| || |||||||||||||||| Sbjct: 1845 accttgtcatcgatggtatcaaacttggtgagca 1812
>ref|NM_001039277.1| Gallus gallus signal recognition particle receptor ('docking protein') (SRPR), mRNA Length = 3102 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 344 accttgtcatcgatagtgtcaaacttggtgagca 377 |||||||||||||| || |||||||||||||||| Sbjct: 1845 accttgtcatcgatggtatcaaacttggtgagca 1812
>gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 170561 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 4 atattattgtatttattaattaatttc 30 |||||||| |||||||||||||||||| Sbjct: 41936 atattattatatttattaattaatttc 41962
>gb|AY786549.1| Caenorhabditis remanei signal recognition particle receptor alpha subunit mRNA, partial cds Length = 549 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Minus Query: 534 ctctcatcagtggctcattatcctgcatacgaccagccgtatc 576 ||||||||| || ||||||||||||||||| ||||| ||||| Sbjct: 352 ctctcatcaacggttcattatcctgcatacgtccagcagtatc 310
>gb|AC182764.2| Gallus gallus BAC clone CH261-140B3 from chromosome 1, complete sequence Length = 192460 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 tattgtatttattaattaatttc 30 ||||||||||||||||||||||| Sbjct: 162352 tattgtatttattaattaatttc 162374
>emb|AL928650.5| Zebrafish DNA sequence from clone CH211-160D14 in linkage group 17, complete sequence Length = 178563 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 atattattgtatttattaattaattt 29 ||||| |||||||||||||||||||| Sbjct: 142050 atattcttgtatttattaattaattt 142075
>gb|AC144758.2| Danio rerio, complete sequence Length = 177787 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 tattattgtatttattaattaattt 29 ||||||| ||||||||||||||||| Sbjct: 89360 tattattttatttattaattaattt 89336
>gb|AC129570.10| Mus musculus chromosome 14, clone RP23-343H21, complete sequence Length = 198703 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 tattattgtatttattaattaattt 29 ||||||| ||||||||||||||||| Sbjct: 188429 tattattatatttattaattaattt 188405
>gb|AC124694.3| Mus musculus BAC clone RP24-171H8 from chromosome 14, complete sequence Length = 154741 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 tattattgtatttattaattaattt 29 ||||||| ||||||||||||||||| Sbjct: 38344 tattattatatttattaattaattt 38320
>emb|BX545856.10| Zebrafish DNA sequence from clone DKEY-216E24 in linkage group 9, complete sequence Length = 209295 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 tattattgtatttattaattaattt 29 |||||||||||||||| |||||||| Sbjct: 57547 tattattgtatttatttattaattt 57571
>emb|BX323058.5| Human DNA sequence from clone RP11-12C4 on chromosome 1 Contains part of a novel gene, complete sequence Length = 26982 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 ctctcccacaaataagaccag 498 ||||||||||||||||||||| Sbjct: 21395 ctctcccacaaataagaccag 21375
>emb|AL645804.8| Zebrafish DNA sequence from clone BUSM1-25N23 Contains the 3' part of a novel gene similar to CBL (Cas-Br-M (murine) ecotropic retroviral transforming sequence), the 3' part of the alcam gene for activated leukocyte cell adhesion molecule and a putative novel gene, complete sequence Length = 119087 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 tattattgtatttattaattaattt 29 |||||||||||| |||||||||||| Sbjct: 32939 tattattgtattaattaattaattt 32963
>gb|AY955840.1| Paracoccidioides brasiliensis strain Pb18 mitochondrion, complete genome Length = 71335 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 tatttattaattaatttctga 33 ||||||||||||||||||||| Sbjct: 70858 tatttattaattaatttctga 70878
>emb|BX601643.6| Zebrafish DNA sequence from clone DKEY-32B18 in linkage group 9, complete sequence Length = 165857 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 atattattgtatttattaatt 24 ||||||||||||||||||||| Sbjct: 74429 atattattgtatttattaatt 74409
>gb|AF538048.1| Amoebidium parasiticum mitochondrial chromosome 0356iay27_mtg_cplt, complete sequence Length = 3232 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 tatttattaattaatttctga 33 ||||||||||||||||||||| Sbjct: 769 tatttattaattaatttctga 789
>emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in linkage group 22, complete sequence Length = 159207 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 atattattgtatttattaattaatt 28 ||||||||||||||| ||||||||| Sbjct: 11591 atattattgtatttactaattaatt 11567
>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 262797 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 ccaaccaatgcctctcccaca 487 ||||||||||||||||||||| Sbjct: 18544 ccaaccaatgcctctcccaca 18564
>gb|AC124976.9| Mus musculus chromosome 3, clone RP24-84E6, complete sequence Length = 218027 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 ccaatgcctctcccacaaat 490 |||||||||||||||||||| Sbjct: 74039 ccaatgcctctcccacaaat 74058
>ref|XM_867780.1| PREDICTED: Bos taurus hypothetical protein LOC615860 (LOC615860), mRNA Length = 987 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 tcagtggctcattatcctgc 559 |||||||||||||||||||| Sbjct: 778 tcagtggctcattatcctgc 759
>gb|AY639147.1| Stizostedion vitreum vitreum genomic sequence Length = 10284 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tgttggaacagtggaaagat 419 |||||||||||||||||||| Sbjct: 3330 tgttggaacagtggaaagat 3311
>gb|AC148025.2| Homo sapiens BAC clone RP11-347N4 from UL, complete sequence Length = 198348 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 63287 ttattgtatttattaatttatttttgag 63314
>gb|AC140884.2| Homo sapiens chromosome 16 clone RP11-1353K19, complete sequence Length = 203870 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 187764 ttattgtatttattaatttatttttgag 187791
>gb|AC162881.2| Echinops telfairi, clone Echinops telfairi -24528857A5, complete sequence Length = 39811 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cacagcagaataagttgacagcaa 79 |||||||||||||| ||||||||| Sbjct: 4635 cacagcagaataagatgacagcaa 4658
>gb|AC147228.3| Mus musculus BAC clone RP23-159I8 from chromosome 5, complete sequence Length = 186527 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ccaatgcctctcccacaaat 490 |||||||||||||||||||| Sbjct: 143608 ccaatgcctctcccacaaat 143589
>gb|AC145889.4| Pan troglodytes BAC clone RP43-8B7 from 7, complete sequence Length = 174930 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 114913 ttattgtatttattaatttatttttgag 114886
>gb|DQ192032.1|DQ192032S1 Stizostedion vitreum vitreum putative calpain-like protein gene, exons 1 through 14 Length = 10677 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tgttggaacagtggaaagat 419 |||||||||||||||||||| Sbjct: 3330 tgttggaacagtggaaagat 3311
>gb|AC006700.1| Caenorhabditis elegans cosmid Y104H12C, complete sequence Length = 1366 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 534 ctctcatcagtggctcattatcctgcat 561 |||||||||| || |||||||||||||| Sbjct: 1207 ctctcatcagcggttcattatcctgcat 1234
>gb|AC141283.3| Homo sapiens chromosome 16 clone RP11-347N4, complete sequence Length = 198348 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 63287 ttattgtatttattaatttatttttgag 63314
>gb|AC140658.2| Homo sapiens chromosome 16 clone RP11-812E19, complete sequence Length = 188406 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 64248 ttattgtatttattaatttatttttgag 64221
>gb|AC142381.2| Homo sapiens chromosome 16 clone RP11-1166P10, complete sequence Length = 211171 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 94302 ttattgtatttattaatttatttttgag 94275
>gb|AC142086.3| Homo sapiens chromosome 16 clone RP11-989E6, complete sequence Length = 177574 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 115350 ttattgtatttattaatttatttttgag 115323
>gb|AC123925.4| Mus musculus BAC clone RP24-292N2 from chromosome 15, complete sequence Length = 166696 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 641 gggtccttctcatatccctt 660 |||||||||||||||||||| Sbjct: 21320 gggtccttctcatatccctt 21301
>gb|AC127432.1| Mus musculus BAC clone RP24-535L6 from 5, complete sequence Length = 151130 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ccaatgcctctcccacaaat 490 |||||||||||||||||||| Sbjct: 71103 ccaatgcctctcccacaaat 71084
>gb|AC103453.7| Rattus norvegicus 13 BAC CH230-127N19 (Children's Hospital Oakland Research Institute) complete sequence Length = 199669 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 tattgtatttattaattaat 27 |||||||||||||||||||| Sbjct: 161605 tattgtatttattaattaat 161586
>emb|Z98269.1|DMC87B1 Drosophila melanogaster cosmid clone 87B1 Length = 40070 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 acatattattgtatttattaattaattt 29 |||||||| | ||||||||||||||||| Sbjct: 2902 acatattaatatatttattaattaattt 2929
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 atttctgattgaacttgttg 445 |||||||||||||||||||| Sbjct: 4287774 atttctgattgaacttgttg 4287793
>gb|AC159646.2| Mus musculus BAC clone RP23-192K23 from chromosome 12, complete sequence Length = 194901 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 ccaatgcctctcccacaaat 490 |||||||||||||||||||| Sbjct: 13607 ccaatgcctctcccacaaat 13626
>emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3 Length = 349751 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 attattgtatttattaattaattt 29 |||||| ||||||||||||||||| Sbjct: 135603 attattttatttattaattaattt 135626
>emb|AL845496.5| Mouse DNA sequence from clone RP23-245J21 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 187964 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ccaatgcctctcccacaaat 490 |||||||||||||||||||| Sbjct: 143683 ccaatgcctctcccacaaat 143664
>emb|AJ004809.1|TTAJ4809 Thuidium tamariscinum mitochondrial nad5 gene, partial Length = 1935 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tatttattaattaatttctg 32 |||||||||||||||||||| Sbjct: 113 tatttattaattaatttctg 132
>gb|AC104510.6| Drosophila melanogaster X BAC RP98-26J12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168583 Score = 40.1 bits (20), Expect = 9.9 Identities = 74/92 (80%) Strand = Plus / Plus Query: 470 accaatgcctctcccacaaataagaccagatctggcttgttgagattgatgagcttggag 529 |||| |||||| ||||| |||| |||||||| || ||||| | ||||| |||||||| Sbjct: 60511 accagtgcctcgcccacgaatagcaccagatccggattgttcactttgattagcttggac 60570 Query: 530 agtgctctcatcagtggctcattatcctgcat 561 || | | |||||| ||||| ||||||||||| Sbjct: 60571 agggaacgcatcagcggctcgttatcctgcat 60602
>gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete sequence Length = 107160 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aaaccaaacgagaaaaacaa 134 |||||||||||||||||||| Sbjct: 41908 aaaccaaacgagaaaaacaa 41889
>gb|U17012.1|SCU17012 Schizophyllum commune NADH dehydrogenase, subunit 5 (nad5) gene, complete cds; mitochondrial gene for mitochondrial product Length = 2081 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tatttattaattaatttctg 32 |||||||||||||||||||| Sbjct: 512 tatttattaattaatttctg 531
>ref|NM_080148.2| Drosophila melanogaster GTP-binding protein CG2522-RA (Gtp-bp), mRNA Length = 2074 Score = 40.1 bits (20), Expect = 9.9 Identities = 74/92 (80%) Strand = Plus / Minus Query: 470 accaatgcctctcccacaaataagaccagatctggcttgttgagattgatgagcttggag 529 |||| |||||| ||||| |||| |||||||| || ||||| | ||||| |||||||| Sbjct: 1724 accagtgcctcgcccacgaatagcaccagatccggattgttcactttgattagcttggac 1665 Query: 530 agtgctctcatcagtggctcattatcctgcat 561 || | | |||||| ||||| ||||||||||| Sbjct: 1664 agggaacgcatcagcggctcgttatcctgcat 1633
>gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177724 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 acatattattgtatttattaattaattt 29 |||||||| | ||||||||||||||||| Sbjct: 98209 acatattaatatatttattaattaattt 98236
>gb|AY061329.1| Drosophila melanogaster LD25651 full length cDNA Length = 2065 Score = 40.1 bits (20), Expect = 9.9 Identities = 74/92 (80%) Strand = Plus / Minus Query: 470 accaatgcctctcccacaaataagaccagatctggcttgttgagattgatgagcttggag 529 |||| |||||| ||||| |||| |||||||| || ||||| | ||||| |||||||| Sbjct: 1694 accagtgcctcgcccacgaatagcaccagatccggattgttcactttgattagcttggac 1635 Query: 530 agtgctctcatcagtggctcattatcctgcat 561 || | | |||||| ||||| ||||||||||| Sbjct: 1634 agggaacgcatcagcggctcgttatcctgcat 1603
>gb|S65640.1| Drosophila sp. GTP-binding protein (GTP-binding protein) mRNA, partial cds Length = 504 Score = 40.1 bits (20), Expect = 9.9 Identities = 74/92 (80%) Strand = Plus / Minus Query: 470 accaatgcctctcccacaaataagaccagatctggcttgttgagattgatgagcttggag 529 |||| |||||| ||||| |||| |||||||| || ||||| | ||||| |||||||| Sbjct: 383 accagtgcctcgcccacgaatagcaccagatccggattgttcactttgattagcttggac 324 Query: 530 agtgctctcatcagtggctcattatcctgcat 561 || | | |||||| ||||| ||||||||||| Sbjct: 323 agggaacgcatcagcggctcgttatcctgcat 292
>emb|CR392361.2| Zebrafish DNA sequence from clone DKEY-73H23 in linkage group 9, complete sequence Length = 163815 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ttgtatttattaattaattt 29 |||||||||||||||||||| Sbjct: 96339 ttgtatttattaattaattt 96320
>gb|AF047663.3| Caenorhabditis elegans cosmid W09G12, complete sequence Length = 32179 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 534 ctctcatcagtggctcattatcctgcat 561 |||||||||| || |||||||||||||| Sbjct: 32086 ctctcatcagcggttcattatcctgcat 32113
>gb|AE016826.1| Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome Length = 615980 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 atattattgtatttattaat 23 |||||||||||||||||||| Sbjct: 198562 atattattgtatttattaat 198581
>gb|AC155301.2| Mus musculus BAC clone RP24-216J21 from chromosome 13, complete sequence Length = 192299 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 636 ctgctgggtccttctcatat 655 |||||||||||||||||||| Sbjct: 166695 ctgctgggtccttctcatat 166714
>ref|NM_067658.2| Caenorhabditis elegans W09G12.5 (W09G12.5) mRNA, complete cds Length = 976 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 534 ctctcatcagtggctcattatcctgcat 561 |||||||||| || |||||||||||||| Sbjct: 28 ctctcatcagcggttcattatcctgcat 1
>emb|BX545854.10| Zebrafish DNA sequence from clone CH211-195N8 in linkage group 11, complete sequence Length = 190179 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 acagtggaaagatctgccaa 426 |||||||||||||||||||| Sbjct: 108689 acagtggaaagatctgccaa 108670
>gb|AC140873.3| Homo sapiens chromosome 16 clone RP11-1161D4, complete sequence Length = 191227 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 188649 ttattgtatttattaatttatttttgag 188676
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 attattgtatttattaatta 25 |||||||||||||||||||| Sbjct: 8433206 attattgtatttattaatta 8433187
>gb|AC027281.10| Homo sapiens chromosome 16 clone RP11-424M24, complete sequence Length = 221210 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 attattgtatttattaattaattt 29 ||||||||||||||| |||||||| Sbjct: 81183 attattgtatttatttattaattt 81206
>gb|AC092144.4| Homo sapiens chromosome 16 clone RP11-572L10, complete sequence Length = 186711 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 54818 ttattgtatttattaatttatttttgag 54845
>gb|AC009057.10| Homo sapiens chromosome 16 clone RP11-274A17, complete sequence Length = 170820 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 74969 ttattgtatttattaatttatttttgag 74996
>gb|AY908406.1| Vesicularia vesicularis isolate MDP317 NADH dehydrogenase subunit 5 (nad5) gene, partial cds; mitochondrial Length = 1176 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tatttattaattaatttctg 32 |||||||||||||||||||| Sbjct: 1 tatttattaattaatttctg 20
>gb|AF402141.1| Schizophyllum commune mitochondrial DNA, complete genome Length = 49704 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tatttattaattaatttctg 32 |||||||||||||||||||| Sbjct: 47442 tatttattaattaatttctg 47461
>gb|AC138801.2| Homo sapiens chromosome 16 clone CTD-3129O20, complete sequence Length = 150183 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 89998 ttattgtatttattaatttatttttgag 89971
>gb|AC136616.4| Homo sapiens chromosome 16 clone RP11-44A7, complete sequence Length = 174477 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 124579 ttattgtatttattaatttatttttgag 124552
>gb|AC141272.3| Homo sapiens chromosome 16 clone RP11-1415K9, complete sequence Length = 185187 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 161488 ttattgtatttattaatttatttttgag 161515
>gb|AC133561.4| Homo sapiens chromosome 16 clone RP11-598D12, complete sequence Length = 169866 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 21801 ttattgtatttattaatttatttttgag 21828
>gb|AC129207.4| Mus musculus chromosome 5 clone RP24-280N5, complete sequence Length = 165994 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ccaatgcctctcccacaaat 490 |||||||||||||||||||| Sbjct: 18913 ccaatgcctctcccacaaat 18894
>gb|AC078955.25| Homo sapiens 12 BAC RP11-543H12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159577 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 attgtatttattaattaatt 28 |||||||||||||||||||| Sbjct: 124840 attgtatttattaattaatt 124821
>gb|AC136440.3| Homo sapiens chromosome 16 clone RP11-378C4, complete sequence Length = 175691 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 7 ttattgtatttattaattaatttctgag 34 |||||||||||||||||| |||| |||| Sbjct: 35252 ttattgtatttattaatttatttttgag 35279
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 atttctgattgaacttgttg 445 |||||||||||||||||||| Sbjct: 4402158 atttctgattgaacttgttg 4402177
>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0056I06 Length = 138653 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 attattgtatttattaatta 25 |||||||||||||||||||| Sbjct: 64799 attattgtatttattaatta 64780
>gb|AC154480.2| Mus musculus BAC clone RP24-135M1 from 13, complete sequence Length = 171846 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 catattattgtatttattaa 22 |||||||||||||||||||| Sbjct: 50497 catattattgtatttattaa 50478
>emb|BX679675.28| Zebrafish DNA sequence from clone CH211-37L23 in linkage group 17, complete sequence Length = 119154 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 attgtatttattaattaatt 28 |||||||||||||||||||| Sbjct: 79393 attgtatttattaattaatt 79374
>gb|AC133079.4| Mus musculus BAC clone RP24-468O18 from 12, complete sequence Length = 176177 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ccaatgcctctcccacaaat 490 |||||||||||||||||||| Sbjct: 112027 ccaatgcctctcccacaaat 112008
>emb|CR387935.16| Zebrafish DNA sequence from clone CH211-212O1 in linkage group 18, complete sequence Length = 152685 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 attattgtatttattaattaattt 29 |||||| ||||||||||||||||| Sbjct: 121997 attattttatttattaattaattt 121974
>emb|BX649436.12| Zebrafish DNA sequence from clone DKEYP-50F7 in linkage group 20, complete sequence Length = 99233 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 tattattgtatttattaattaatt 28 ||||||| |||||||||||||||| Sbjct: 4710 tattattttatttattaattaatt 4733
>gb|AE003485.3| Drosophila melanogaster chromosome X, section 37 of 74 of the complete sequence Length = 283075 Score = 40.1 bits (20), Expect = 9.9 Identities = 74/92 (80%) Strand = Plus / Plus Query: 470 accaatgcctctcccacaaataagaccagatctggcttgttgagattgatgagcttggag 529 |||| |||||| ||||| |||| |||||||| || ||||| | ||||| |||||||| Sbjct: 40704 accagtgcctcgcccacgaatagcaccagatccggattgttcactttgattagcttggac 40763 Query: 530 agtgctctcatcagtggctcattatcctgcat 561 || | | |||||| ||||| ||||||||||| Sbjct: 40764 agggaacgcatcagcggctcgttatcctgcat 40795
>gb|AE003423.2| Drosophila melanogaster chromosome X, section 7 of 74 of the complete sequence Length = 292830 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 acatattattgtatttattaattaattt 29 |||||||| | ||||||||||||||||| Sbjct: 57888 acatattaatatatttattaattaattt 57915
>emb|BX005134.5| Zebrafish DNA sequence from clone CH211-162G1 in linkage group 12, complete sequence Length = 132434 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ttgtatttattaattaattt 29 |||||||||||||||||||| Sbjct: 70893 ttgtatttattaattaattt 70912
>emb|CT010471.11| Mouse DNA sequence from clone RP23-20A5 on chromosome 13, complete sequence Length = 219145 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 636 ctgctgggtccttctcatat 655 |||||||||||||||||||| Sbjct: 133428 ctgctgggtccttctcatat 133447
>emb|AL010277.1|PFSC04108 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *** from contig 4-108, complete sequence Length = 6855 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 attattgtatttattaattaattt 29 |||||| ||||||||||||||||| Sbjct: 4403 attattttatttattaattaattt 4426
>gb|AC012435.13| Homo sapiens chromosome 15, clone RP11-10O17, complete sequence Length = 132994 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tattattgtatttattaatt 24 |||||||||||||||||||| Sbjct: 56677 tattattgtatttattaatt 56658
>gb|M64750.1|DROZFP Drosophila melanogaster zinc finger protein gene Length = 28627 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 acatattattgtatttattaattaattt 29 |||||||| | ||||||||||||||||| Sbjct: 17064 acatattaatatatttattaattaattt 17037 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,760,281 Number of Sequences: 3902068 Number of extensions: 6760281 Number of successful extensions: 142101 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 141660 Number of HSP's gapped (non-prelim): 440 length of query: 723 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 700 effective length of database: 17,143,297,704 effective search space: 12000308392800 effective search space used: 12000308392800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
