>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  282 bits (722), Expect = 4e-76
 Identities = 137/140 (97%), Positives = 137/140 (97%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           DTFPGQSIDF GA RARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL
Sbjct: 325 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 384

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQ 174
           EYGHMLVQEQ NVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQ
Sbjct: 385 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQ 444

Query: 173 NAKNYDPTARSDDGSCLYTF 114
           NAKNYDPTARSDDGSCLYTF
Sbjct: 445 NAKNYDPTARSDDGSCLYTF 464

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  222 bits (566), Expect = 4e-58
 Identities = 107/140 (76%), Positives = 121/140 (86%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           D FPGQSIDF GA RARVYDDEVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+
Sbjct: 335 DQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLM 394

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQ 174
           EYG+MLV EQ NVKRVQLA+TY+SQAALGDAN DA+  G+FYGKGAQQ  LPVPEGCTD 
Sbjct: 395 EYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDP 454

Query: 173 NAKNYDPTARSDDGSCLYTF 114
            A+N+DPTARSDDG+C+Y F
Sbjct: 455 VAENFDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  221 bits (562), Expect = 1e-57
 Identities = 103/138 (74%), Positives = 119/138 (86%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           D FPGQSIDF GA RARVY DEVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+
Sbjct: 333 DAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLM 392

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQ 174
           EYG+MLVQEQ NVKRVQLAD YMS AALGDAN+DA+  G+F+GK AQQ +LPV +GCTD 
Sbjct: 393 EYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDP 452

Query: 173 NAKNYDPTARSDDGSCLY 120
            AKNYDPTARSDDGSC Y
Sbjct: 453 EAKNYDPTARSDDGSCTY 470

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  217 bits (553), Expect = 1e-56
 Identities = 105/142 (73%), Positives = 118/142 (83%), Gaps = 2/142 (1%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           DTFPGQSIDF GA RARVY DEVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL
Sbjct: 335 DTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLL 394

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQ--GTLPVPEGCT 180
            YG MLVQEQ NVKRVQLAD YMS+AALGDAN DA+K G+FYG  A Q  G +PVPEGCT
Sbjct: 395 GYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCT 454

Query: 179 DQNAKNYDPTARSDDGSCLYTF 114
           D  A NYDPTARSDDGSC+Y F
Sbjct: 455 DPQATNYDPTARSDDGSCVYKF 476

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  182 bits (462), Expect = 5e-46
 Identities = 86/104 (82%), Positives = 94/104 (90%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           DTFPGQSIDF GA RARVYDDEVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+
Sbjct: 322 DTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLM 381

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFYGK 222
           EYGHMLVQEQ NVKRVQLAD Y+S+AALG AN DAMKTG+FYGK
Sbjct: 382 EYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  178 bits (451), Expect = 1e-44
 Identities = 84/103 (81%), Positives = 94/103 (91%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           D+FPGQSIDF GA RARVYDDEVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+
Sbjct: 325 DSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLI 384

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 225
           EYG+MLV+EQ NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 385 EYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  174 bits (440), Expect = 2e-43
 Identities = 81/103 (78%), Positives = 93/103 (90%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           DTFPGQSIDF GA RARVYDDEVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLL
Sbjct: 335 DTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLL 394

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 225
           EYG+MLVQEQ NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 395 EYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  171 bits (434), Expect = 9e-43
 Identities = 79/102 (77%), Positives = 93/102 (91%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           DTFPGQSIDF GA RARVYDDEVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLL
Sbjct: 331 DTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLL 390

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFY 228
           EYGHMLV EQ NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 391 EYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  166 bits (420), Expect = 4e-41
 Identities = 81/101 (80%), Positives = 89/101 (88%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           DTFPGQSIDF GA RARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLL
Sbjct: 339 DTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLL 398

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSF 231
           EYG+MLVQEQ NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 399 EYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  165 bits (417), Expect = 8e-41
 Identities = 77/101 (76%), Positives = 90/101 (89%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           D FPGQSIDF GA RARVYDDEVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL
Sbjct: 335 DQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLL 394

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSF 231
           +YG+MLV+EQ NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 395 QYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  164 bits (415), Expect = 1e-40
 Identities = 79/99 (79%), Positives = 89/99 (89%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           D+FPGQSIDF GA RARVYDDEVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLL
Sbjct: 334 DSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLL 393

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTG 237
           EYG+MLVQEQ NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 394 EYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  164 bits (415), Expect = 1e-40
 Identities = 79/102 (77%), Positives = 87/102 (85%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           D FPGQSIDF GA RARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLL
Sbjct: 339 DNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLL 398

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFY 228
           EYG+MLVQEQ NVKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 399 EYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  159 bits (403), Expect = 4e-39
 Identities = 72/102 (70%), Positives = 92/102 (90%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           DTFPGQSIDF GA RARVYDDEVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL
Sbjct: 337 DTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLL 396

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFY 228
           +YG+MLVQEQ NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 397 QYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  154 bits (388), Expect = 2e-37
 Identities = 70/102 (68%), Positives = 89/102 (87%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           D  PGQSIDF GA RARVYDDEVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL
Sbjct: 339 DKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLL 398

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFY 228
            Y  MLVQEQ NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 399 LYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  124 bits (311), Expect = 2e-28
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           DTFPGQSIDF GA RARVYDDEVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLL
Sbjct: 332 DTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLL 391

Query: 353 EYGHMLVQEQXNVKRVQL 300
           EYG+MLV EQ NVKRV+L
Sbjct: 392 EYGNMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  103 bits (256), Expect = 4e-22
 Identities = 52/88 (59%), Positives = 64/88 (72%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           DTFPGQSIDF GA RARVYDD VR+W+  TG++ IG++LVN+R   V   +  M +  L+
Sbjct: 308 DTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLI 366

Query: 353 EYGHMLVQEQXNVKRVQLADTYMSQAAL 270
           +YG  LV EQ NVKRVQLAD Y+S A L
Sbjct: 367 KYGKSLVDEQENVKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 35/82 (42%), Positives = 54/82 (65%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           D+FP QSIDF  A R+R+YD+++R ++   G EN+  R+VNS +GP  F++P  T+  L+
Sbjct: 208 DSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLI 267

Query: 353 EYGHMLVQEQXNVKRVQLADTY 288
           E  + +V EQ  ++  QL D Y
Sbjct: 268 ESANFMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 75.5 bits (184), Expect = 9e-14
 Identities = 35/82 (42%), Positives = 52/82 (63%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 354
           DTFP QSIDF  A R+R+YD ++R ++   G E I  R+VNS + P  F++P  ++  L+
Sbjct: 208 DTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLI 267

Query: 353 EYGHMLVQEQXNVKRVQLADTY 288
           E G++++ EQ  V   QL D Y
Sbjct: 268 ESGNLVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 24/58 (41%), Positives = 26/58 (44%)
 Frame = -1

Query: 533 DTFPGQSIDFXGAXRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 360
           DTFPGQSIDF GA R                            +GP TFEQP MT+EK
Sbjct: 3   DTFPGQSIDFFGALR----------------------------EGPPTFEQPAMTIEK 32

>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 23) (DHHC-23)
          Length = 409

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
 Frame = +1

Query: 187 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLXCSWTSMCPYSSSF 363
           P G+ K+P  +P   KE       L  P  AW   +   C  R+   C W + C   S+ 
Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301

Query: 364 STVI 375
              I
Sbjct: 302 QAFI 305

>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = +1

Query: 295 SASCTRLTLXCSWT----SMCPYSSSFSTVIFGCSKVTGPSREFTSLLPMFSIPVEPTHL 462
           SAS T LT   S +    S  P +S+ ST     S  T PS   +S+LP  S+   P   
Sbjct: 369 SASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSS-TAPSYNTSSVLPTSSVSSTPLSS 427

Query: 463 RTSSSYTRARXAPKKSMD 516
             S++ T A   P  S++
Sbjct: 428 ANSTTATSASSTPLSSVN 445



 Score = 29.3 bits (64), Expect = 7.2
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = +1

Query: 295 SASCTRLTLXCSWT----SMCPYSSSFSTVIFGCSKVTGPSREFTSLLPMFSIPVEPTHL 462
           SAS T LT   S +    S  P +S+ ST     S  T PS   +S+LP  S+   P   
Sbjct: 483 SASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSS-TAPSYNTSSVLPTSSVSSTPLSS 541

Query: 463 RTSSSYTRARXAPKKSMD 516
             S++ T A   P  S++
Sbjct: 542 ANSTTATSASSTPLTSVN 559

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 292 VSASCTRLTLXCSWTSMCPYSSSFSTVIFGCSKVT 396
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like mitochondrial|
           protein
          Length = 442

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 19/36 (52%), Positives = 21/36 (58%)
 Frame = -3

Query: 240 WFLLR*RSTARYFARAGRLHRPKCQELRPNGKERRR 133
           +FL R RS  R  AR     R K Q LRPNG E+RR
Sbjct: 139 FFLARDRSAKRERAR-----RRKGQTLRPNGNEQRR 169

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -1

Query: 458 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 351
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

>DNLI_VARV (P33798) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase|
           [ATP])
          Length = 552

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -1

Query: 335 VQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 168
           V E    + +++   Y+++ ++ D+  D +  G++YGKGA+ G + V   GC D  +
Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442

>DNLI_VACCV (P16272) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase|
           [ATP])
          Length = 552

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -1

Query: 335 VQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 168
           V E    + +++   Y+++ ++ D+  D +  G++YGKGA+ G + V   GC D  +
Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442

>DNLI_VACCC (P20492) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase|
           [ATP])
          Length = 552

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -1

Query: 335 VQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 168
           V E    + +++   Y+++ ++ D+  D +  G++YGKGA+ G + V   GC D  +
Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442

>DNLI_VACCA (O57250) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase|
           [ATP])
          Length = 552

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -1

Query: 335 VQEQXNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 168
           V E    + +++   Y+++ ++ D+  D +  G++YGKGA+ G + V   GC D  +
Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442

>S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B (Solute carrier|
           family 20 member 1-B)
          Length = 685

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
 Frame = +3

Query: 117 GVKAAAVVAPCRWVVVLGILVG--ATFRHGQSTLLCSFTVEGTSLHRILVSITQSCL 281
           G++   ++AP  W++VLG ++     F  G + +  SF   GT++   +V++ Q+C+
Sbjct: 15  GIQDVHIMAPYLWMLVLGFVIAFVLAFSVGANDVANSF---GTAVGSGVVTLRQACI 68

>PBPB_BACSU (Q07868) Penicillin-binding protein 2B (PBP-2B)|
          Length = 716

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 476 DDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPK 375
           D+E  +  G+ G+E +  + +  RDG VT+E  K
Sbjct: 186 DEETNEISGAMGLEKVLDKYLKERDGYVTYESDK 219


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,782,911
Number of Sequences: 219361
Number of extensions: 1429133
Number of successful extensions: 4009
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4007
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)