ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal41d19 |
|---|---|
| Clone Library Name | barley_pub |
>ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC| 4.1.2.13) (ALDP) Length = 388 Score = 62.8 bits (151), Expect = 3e-10 Identities = 32/47 (68%), Positives = 33/47 (70%) Frame = -1 Query: 419 RPXNVXXXXXXXXXXXXANSLAQLGKYTSDGEAAEAKEGMFVKNYSY 279 +P NV ANSLAQLGKYTSDGEAAEAKEGMFVKNY Y Sbjct: 342 QPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388
>ALFC_PEA (Q01516) Fructose-bisphosphate aldolase 1, chloroplast precursor| (EC 4.1.2.13) (Fragment) Length = 356 Score = 49.3 bits (116), Expect = 4e-06 Identities = 24/46 (52%), Positives = 28/46 (60%) Frame = -1 Query: 416 PXNVXXXXXXXXXXXXANSLAQLGKYTSDGEAAEAKEGMFVKNYSY 279 P NV +NSLAQLGKY DGE+ EAK+ +FVK YSY Sbjct: 311 PENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356
>ALFC_SPIOL (P16096) Fructose-bisphosphate aldolase, chloroplast precursor (EC| 4.1.2.13) Length = 394 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/25 (72%), Positives = 21/25 (84%) Frame = -1 Query: 365 NSLAQLGKYTSDGEAAEAKEGMFVK 291 NSLAQLGKYT +GE+ E K+ MFVK Sbjct: 365 NSLAQLGKYTGEGESEERKKDMFVK 389
>ALFD_PEA (Q01517) Fructose-bisphosphate aldolase 2, chloroplast (EC| 4.1.2.13) Length = 349 Score = 38.5 bits (88), Expect = 0.007 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = -1 Query: 416 PXNVXXXXXXXXXXXXANSLAQLGKYTSDGEAAEAKEGMFVKNYSY 279 P NV +NSLAQLGKY DGE+ EAK+ + YSY Sbjct: 305 PENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349
>ALF1_CAEEL (P54216) Fructose-bisphosphate aldolase 1 (EC 4.1.2.13) (Aldolase| CE-1) (CE1) Length = 366 Score = 35.0 bits (79), Expect = 0.072 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = -1 Query: 365 NSLAQLGKYTSDGEA-AEAKEGMFVKNYSY 279 NSLA +GKYT D A A A + +FV N+SY Sbjct: 337 NSLASVGKYTGDASADAAASQSLFVANHSY 366
>ALDOA_PONPY (Q5NVR5) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) Length = 363 Score = 33.5 bits (75), Expect = 0.21 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = -1 Query: 365 NSLAQLGKYTSDGEA-AEAKEGMFVKNYSY 279 NSLA GKYT G+A A A E +FV N++Y Sbjct: 334 NSLACQGKYTPSGQAGAAASESLFVSNHAY 363
>ALDOA_HUMAN (P04075) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) (Lung cancer antigen NY-LU-1) Length = 363 Score = 33.5 bits (75), Expect = 0.21 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = -1 Query: 365 NSLAQLGKYTSDGEA-AEAKEGMFVKNYSY 279 NSLA GKYT G+A A A E +FV N++Y Sbjct: 334 NSLACQGKYTPSGQAGAAASESLFVSNHAY 363
>ALDOA_RABIT (P00883) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) Length = 363 Score = 33.1 bits (74), Expect = 0.27 Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = -1 Query: 365 NSLAQLGKYTSDGEA-AEAKEGMFVKNYSY 279 NSLA GKYT G+A A A E +F+ N++Y Sbjct: 334 NSLACQGKYTPSGQAGAAASESLFISNHAY 363
>ALDOA_RAT (P05065) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) Length = 363 Score = 32.0 bits (71), Expect = 0.61 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = -1 Query: 365 NSLAQLGKYTSDGEA-AEAKEGMFVKNYSY 279 NSLA GKYT G++ A A E +F+ N++Y Sbjct: 334 NSLACQGKYTPSGQSGAAASESLFISNHAY 363
>ALDOA_MOUSE (P05064) Fructose-bisphosphate aldolase A (EC 4.1.2.13)| (Muscle-type aldolase) (Aldolase 1) Length = 363 Score = 32.0 bits (71), Expect = 0.61 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = -1 Query: 365 NSLAQLGKYTSDGEA-AEAKEGMFVKNYSY 279 NSLA GKYT G++ A A E +F+ N++Y Sbjct: 334 NSLACQGKYTPSGQSGAAASESLFISNHAY 363
>ALF_SPIOL (P29356) Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC| 4.1.2.13) Length = 357 Score = 31.2 bits (69), Expect = 1.0 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = -1 Query: 410 NVXXXXXXXXXXXXANSLAQLGKYTSDGEAAEAKEGMFVKNYSY 279 NV NS A LGKY A+A E + VK+Y Y Sbjct: 314 NVAKAQEVFLARAKGNSEATLGKYQGGAGGADASESLHVKDYKY 357
>ALF_ECHMU (Q9GP32) Fructose-bisphosphate aldolase (EC 4.1.2.13)| Length = 363 Score = 30.0 bits (66), Expect = 2.3 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = -1 Query: 419 RPXNVXXXXXXXXXXXXANSLAQLGKYTSDGEAAEAKEGMFVKNYSY 279 +P NV AN A LGK+ + + A ++ +FV N++Y Sbjct: 317 KPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAGQKSLFVANHAY 363
>ALF2_CAEEL (P46563) Fructose-bisphosphate aldolase 2 (EC 4.1.2.13) (Aldolase| CE-2) (CE2) Length = 366 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -1 Query: 410 NVXXXXXXXXXXXXANSLAQLGKYTSDGEAAEAKEGMFVKNYSY 279 N+ AN A LGKY + A A E +FV +SY Sbjct: 323 NIAAAQKTLLHRSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366
>ALFC_CHLRE (Q42690) Fructose-bisphosphate aldolase 1, chloroplast precursor| (EC 4.1.2.13) Length = 374 Score = 29.3 bits (64), Expect = 3.9 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -1 Query: 365 NSLAQLGKYTSDGEAAEAKEGMFVKNYSY 279 NS AQ GKY + E EA +GM+ K Y Sbjct: 344 NSDAQQGKYDATTEGKEAAQGMYEKGKGY 372
>NRCAM_MOUSE (Q810U4) Neuronal cell adhesion molecule precursor (Nr-CAM)| (NgCAM-related cell adhesion molecule) (Ng-CAM-related) (mBravo) Length = 1256 Score = 28.9 bits (63), Expect = 5.2 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +2 Query: 86 VKVALE*STGTVKCISRGKLTCKKRSRKYSNHHLRFRLPARSIYHASFCLVR 241 + VA + STGT C++R KL K + HL + P R I + +V+ Sbjct: 506 IPVAQKDSTGTYTCVARNKLGMAK-----NEVHLEIKDPTRIIKQPEYAVVQ 552
>NRCAM_RAT (P97686) Neuronal cell adhesion molecule precursor (Nr-CAM)| (NgCAM-related cell adhesion molecule) (Ng-CAM-related) (rBravo) (Ankyrin-binding cell adhesion molecule NrCAM) Length = 1214 Score = 28.9 bits (63), Expect = 5.2 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +2 Query: 86 VKVALE*STGTVKCISRGKLTCKKRSRKYSNHHLRFRLPARSIYHASFCLVR 241 + VA + STGT C++R KL K + HL + P R I + +V+ Sbjct: 512 IPVAQKDSTGTYTCVARNKLGMAK-----NEVHLEIKDPTRFIKQPGYAVVQ 558
>ALF2_LAMJA (P53446) Fructose-bisphosphate aldolase, non-muscle type (EC| 4.1.2.13) Length = 364 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = -1 Query: 416 PXNVXXXXXXXXXXXXANSLAQLGKYTSDGEA-AEAKEGMFVKNYSY 279 P N+ N LA GKY G + + A E +F+ N++Y Sbjct: 318 PANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,006,746 Number of Sequences: 219361 Number of extensions: 667531 Number of successful extensions: 1570 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1543 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1570 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
