ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal41d19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 170 2e-39
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 170 2e-39
3dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
4dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 170 2e-39
6gb|AY103557.1| Zea mays PCO070710 mRNA sequence 167 4e-38
7gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate al... 151 2e-33
8gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds 147 3e-32
9dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolas... 147 3e-32
10dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 3e-26
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 123 5e-25
13emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007... 123 5e-25
14ref|NM_120057.2| Arabidopsis thaliana fructose-bisphosphate aldo... 62 2e-06
15ref|NM_202981.1| Arabidopsis thaliana fructose-bisphosphate aldo... 62 2e-06
16gb|BT015870.1| Arabidopsis thaliana At4g38970 mRNA, complete cds 62 2e-06
17emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, ... 62 2e-06
18emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, B... 62 2e-06
19gb|AF428455.1|AF428455 Arabidopsis thaliana AT4g38970/F19H22_70 ... 62 2e-06
20emb|BX828075.1|CNS0A3X4 Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
21ref|NM_184115.2| Oryza sativa (japonica cultivar-group), mRNA 46 0.091
22dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.091
23dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.091
24dbj|AK099387.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.091
25dbj|AK059097.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.091
26gb|AY106811.1| Zea mays PCO109530 mRNA sequence 46 0.091
27emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 44 0.36
28emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 44 0.36
29emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genom... 44 0.36
30emb|BX826872.1|CNS0A43J Arabidopsis thaliana Full-length cDNA Co... 44 0.36
31gb|AC145945.2| Gallus gallus chromosome UNK clone CH261-23M4, co... 42 1.4
32emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome 42 1.4
33emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 42 1.4
34gb|AC009039.7| Homo sapiens chromosome 16 clone RP11-152O14, com... 42 1.4
35gb|BT017456.1| Zea mays clone EL01N0407B10.c mRNA sequence 40 5.6
36emb|CR751605.10| Zebrafish DNA sequence from clone DKEY-25J15 in... 40 5.6
37emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 5.6
38emb|CT573019.12| Mouse DNA sequence from clone RP24-94G12 on chr... 40 5.6 
>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score =  170 bits (86), Expect = 2e-39
 Identities = 120/132 (90%)
 Strand = Plus / Plus

                                                                         
Query: 285   gtagtttttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactt 344
             |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 63362 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 63421

                                                                         
Query: 345   tccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcctt 404
              ||||||||||| ||||||||||||||||| || || | |||||| | ||||||||||||
Sbjct: 63422 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 63481

                         
Query: 405   gacgttntccgg 416
              ||||| |||||
Sbjct: 63482 cacgttctccgg 63493
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  170 bits (86), Expect = 2e-39
 Identities = 120/132 (90%)
 Strand = Plus / Plus

                                                                           
Query: 285     gtagtttttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactt 344
               |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3469407 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 3469466

                                                                           
Query: 345     tccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcctt 404
                ||||||||||| ||||||||||||||||| || || | |||||| | ||||||||||||
Sbjct: 3469467 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 3469526

                           
Query: 405     gacgttntccgg 416
                ||||| |||||
Sbjct: 3469527 cacgttctccgg 3469538
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>dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C04, full
            insert sequence
          Length = 1492

 Score =  170 bits (86), Expect = 2e-39
 Identities = 120/132 (90%)
 Strand = Plus / Minus

                                                                        
Query: 285  gtagtttttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactt 344
            |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1252 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 1193

                                                                        
Query: 345  tccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcctt 404
             ||||||||||| ||||||||||||||||| || || | |||||| | ||||||||||||
Sbjct: 1192 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 1133

                        
Query: 405  gacgttntccgg 416
             ||||| |||||
Sbjct: 1132 cacgttctccgg 1121
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>dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O18, full
            insert sequence
          Length = 1622

 Score =  170 bits (86), Expect = 2e-39
 Identities = 120/132 (90%)
 Strand = Plus / Minus

                                                                        
Query: 285  gtagtttttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactt 344
            |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1248 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 1189

                                                                        
Query: 345  tccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcctt 404
             ||||||||||| ||||||||||||||||| || || | |||||| | ||||||||||||
Sbjct: 1188 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 1129

                        
Query: 405  gacgttntccgg 416
             ||||| |||||
Sbjct: 1128 cacgttctccgg 1117
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  170 bits (86), Expect = 2e-39
 Identities = 120/132 (90%)
 Strand = Plus / Plus

                                                                           
Query: 285     gtagtttttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactt 344
               |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3478111 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 3478170

                                                                           
Query: 345     tccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcctt 404
                ||||||||||| ||||||||||||||||| || || | |||||| | ||||||||||||
Sbjct: 3478171 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 3478230

                           
Query: 405     gacgttntccgg 416
                ||||| |||||
Sbjct: 3478231 cacgttctccgg 3478242
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>gb|AY103557.1| Zea mays PCO070710 mRNA sequence
          Length = 1761

 Score =  167 bits (84), Expect = 4e-38
 Identities = 127/142 (89%)
 Strand = Plus / Minus

                                                                        
Query: 275  attaatagctgtagtttttgacgaacatgccctctttggcctcggcggcctcgccgtcgc 334
            |||| ||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| 
Sbjct: 1407 attagtagctgtagttcttgacgaacattccctccttggcctcggcggcctcgccgtcgg 1348

                                                                        
Query: 335  tggtgtactttccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnct 394
             ||||||||| ||||||||||| || |||||||||||||| ||||||| |||||| | ||
Sbjct: 1347 aggtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcgtcct 1288

                                  
Query: 395  gcgccgccttgacgttntccgg 416
            ||||||||||||| || |||||
Sbjct: 1287 gcgccgccttgaccttgtccgg 1266
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>gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1577

 Score =  151 bits (76), Expect = 2e-33
 Identities = 111/123 (90%)
 Strand = Plus / Minus

                                                                        
Query: 280  tagctgtagtttttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtg 339
            ||||||||||| ||||||||||||||||| |||||  | |||||||||||||||||||||
Sbjct: 1261 tagctgtagttcttgacgaacatgccctccttggcggccgcggcctcgccgtcgctggtg 1202

                                                                        
Query: 340  tactttccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgcc 399
            ||||| ||||||||||| || |||||||||||||| |||||||  ||||||| |||||||
Sbjct: 1201 tacttgccgagctgcgccagggagttggccttggcgcgcagcagaagcgcctcctgcgcc 1142

               
Query: 400  gcc 402
            |||
Sbjct: 1141 gcc 1139
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>gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds
          Length = 1302

 Score =  147 bits (74), Expect = 3e-32
 Identities = 117/132 (88%)
 Strand = Plus / Minus

                                                                        
Query: 285  gtagtttttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactt 344
            |||||| |||||||||||||| || |||||||||||||| ||||||||||||||||||||
Sbjct: 1144 gtagttcttgacgaacatgccttccttggcctcggcggcttcgccgtcgctggtgtactt 1085

                                                                        
Query: 345  tccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcctt 404
             ||||||||||| ||||||||||||||||| || || | |||||| | ||||||||| ||
Sbjct: 1084 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcttt 1025

                        
Query: 405  gacgttntccgg 416
             ||||| |||||
Sbjct: 1024 cacgttctccgg 1013
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>dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolase, complete cds, clone:Aldp
          Length = 2915

 Score =  147 bits (74), Expect = 3e-32
 Identities = 86/90 (95%)
 Strand = Plus / Minus

                                                                        
Query: 285  gtagtttttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactt 344
            |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2780 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 2721

                                          
Query: 345  tccgagctgcgcgagcgagttggccttggc 374
             ||||||||||| |||||||||||||||||
Sbjct: 2720 gccgagctgcgccagcgagttggccttggc 2691
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>dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A10, full
            insert sequence
          Length = 2135

 Score =  127 bits (64), Expect = 3e-26
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                        
Query: 311  tggcctcggcggcctcgccgtcgctggtgtactttccgagctgcgcgagcgagttggcct 370
            ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 1217 tggccgcggcggcctcgccgtcgctggtgtacttgccgagctgcgccagcgagttggcct 1158

                                                          
Query: 371  tggcacgcagcaacagcgcctnctgcgccgccttgacgttntccgg 416
            |||| || || | |||||| | |||||||||||| ||||| |||||
Sbjct: 1157 tggcgcggaggagcagcgcgtcctgcgccgccttcacgttctccgg 1112
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  123 bits (62), Expect = 5e-25
 Identities = 77/82 (93%)
 Strand = Plus / Minus

                                                                           
Query: 284     tgtagtttttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtact 343
               ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 3543505 tgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgctggtgtact 3543446

                                     
Query: 344     ttccgagctgcgcgagcgagtt 365
               | ||||||||||| ||||||||
Sbjct: 3543445 tgccgagctgcgccagcgagtt 3543424



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                 
Query: 39      tacatgcaaaattttgcagtaaccatgcaaatcc 72
               ||||||||||||||||||| ||||||||||||||
Sbjct: 3543911 tacatgcaaaattttgcagcaaccatgcaaatcc 3543878
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  123 bits (62), Expect = 5e-25
 Identities = 77/82 (93%)
 Strand = Plus / Minus

                                                                           
Query: 284     tgtagtttttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtact 343
               ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 3543450 tgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgctggtgtact 3543391

                                     
Query: 344     ttccgagctgcgcgagcgagtt 365
               | ||||||||||| ||||||||
Sbjct: 3543390 tgccgagctgcgccagcgagtt 3543369



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                 
Query: 39      tacatgcaaaattttgcagtaaccatgcaaatcc 72
               ||||||||||||||||||| ||||||||||||||
Sbjct: 3543856 tacatgcaaaattttgcagcaaccatgcaaatcc 3543823
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>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103647

 Score =  123 bits (62), Expect = 5e-25
 Identities = 77/82 (93%)
 Strand = Plus / Minus

                                                                         
Query: 284   tgtagtttttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtact 343
             ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 58433 tgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgctggtgtact 58374

                                   
Query: 344   ttccgagctgcgcgagcgagtt 365
             | ||||||||||| ||||||||
Sbjct: 58373 tgccgagctgcgccagcgagtt 58352



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 39    tacatgcaaaattttgcagtaaccatgcaaatcc 72
             ||||||||||||||||||| ||||||||||||||
Sbjct: 58839 tacatgcaaaattttgcagcaaccatgcaaatcc 58806
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>ref|NM_120057.2| Arabidopsis thaliana fructose-bisphosphate aldolase AT4G38970
            transcript variant AT4G38970.1 mRNA, complete cds
          Length = 1496

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                        
Query: 291  tttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactttccgag 350
            |||||||||||||||||| || |||||  ||| ||| || || | |||||| ||||||||
Sbjct: 1263 tttgacgaacatgccctccttagcctcttcggactcaccctcaccggtgtattttccgag 1204

                                       
Query: 351  ctgcgcgagcgagttggccttggcacg 377
            ||| || | ||| ||||||||||||||
Sbjct: 1203 ctgagccaacgaattggccttggcacg 1177
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>ref|NM_202981.1| Arabidopsis thaliana fructose-bisphosphate aldolase AT4G38970
            transcript variant AT4G38970.2 mRNA, complete cds
          Length = 1500

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                        
Query: 291  tttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactttccgag 350
            |||||||||||||||||| || |||||  ||| ||| || || | |||||| ||||||||
Sbjct: 1267 tttgacgaacatgccctccttagcctcttcggactcaccctcaccggtgtattttccgag 1208

                                       
Query: 351  ctgcgcgagcgagttggccttggcacg 377
            ||| || | ||| ||||||||||||||
Sbjct: 1207 ctgagccaacgaattggccttggcacg 1181
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>gb|BT015870.1| Arabidopsis thaliana At4g38970 mRNA, complete cds
          Length = 1197

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                        
Query: 291  tttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactttccgag 350
            |||||||||||||||||| || |||||  ||| ||| || || | |||||| ||||||||
Sbjct: 1182 tttgacgaacatgccctccttagcctcttcggactcaccctcaccggtgtattttccgag 1123

                                       
Query: 351  ctgcgcgagcgagttggccttggcacg 377
            ||| || | ||| ||||||||||||||
Sbjct: 1122 ctgagccaacgaattggccttggcacg 1096
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>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90
          Length = 198987

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                         
Query: 291   tttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactttccgag 350
             |||||||||||||||||| || |||||  ||| ||| || || | |||||| ||||||||
Sbjct: 77884 tttgacgaacatgccctccttagcctcttcggactcaccctcaccggtgtattttccgag 77943

                                        
Query: 351   ctgcgcgagcgagttggccttggcacg 377
             ||| || | ||| ||||||||||||||
Sbjct: 77944 ctgagccaacgaattggccttggcacg 77970
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>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project)
          Length = 100469

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                         
Query: 291   tttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactttccgag 350
             |||||||||||||||||| || |||||  ||| ||| || || | |||||| ||||||||
Sbjct: 39874 tttgacgaacatgccctccttagcctcttcggactcaccctcaccggtgtattttccgag 39933

                                        
Query: 351   ctgcgcgagcgagttggccttggcacg 377
             ||| || | ||| ||||||||||||||
Sbjct: 39934 ctgagccaacgaattggccttggcacg 39960
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>gb|AF428455.1|AF428455 Arabidopsis thaliana AT4g38970/F19H22_70 mRNA, complete cds
          Length = 1419

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                        
Query: 291  tttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactttccgag 350
            |||||||||||||||||| || |||||  ||| ||| || || | |||||| ||||||||
Sbjct: 1257 tttgacgaacatgccctccttagcctcttcggactcaccctcaccggtgtattttccgag 1198

                                       
Query: 351  ctgcgcgagcgagttggccttggcacg 377
            ||| || | ||| ||||||||||||||
Sbjct: 1197 ctgagccaacgaattggccttggcacg 1171
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>emb|BX828075.1|CNS0A3X4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH4ZH02 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1370

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                        
Query: 291  tttgacgaacatgccctctttggcctcggcggcctcgccgtcgctggtgtactttccgag 350
            |||||||||||||||||| || |||||  ||| ||| || || | |||||| ||||||||
Sbjct: 1252 tttgacgaacatgccctccttagcctcttcggactcaccctcaccggtgtattttccgag 1193

                                       
Query: 351  ctgcgcgagcgagttggccttggcacg 377
            ||| || | ||| ||||||||||||||
Sbjct: 1192 ctgagccaacgaattggccttggcacg 1166
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>ref|NM_184115.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1421

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 346  ccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcct 403
            |||||||| || |||||||| ||||||||||| | || ||| |||| |||||| ||||
Sbjct: 1162 ccgagctgagccagcgagttcgccttggcacggaccagcagtgccttctgcgctgcct 1105
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                         
Query: 346     ccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcct 403
               |||||||| || |||||||| ||||||||||| | || ||| |||| |||||| ||||
Sbjct: 1018176 ccgagctgagccagcgagttcgccttggcacggaccagcagtgccttctgcgctgcct 1018119
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>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0494A10
          Length = 145576

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 346   ccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcct 403
             |||||||| || |||||||| ||||||||||| | || ||| |||| |||||| ||||
Sbjct: 55844 ccgagctgagccagcgagttcgccttggcacggaccagcagtgccttctgcgctgcct 55787
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>dbj|AK099387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075H15, full
            insert sequence
          Length = 1477

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 346  ccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcct 403
            |||||||| || |||||||| ||||||||||| | || ||| |||| |||||| ||||
Sbjct: 1161 ccgagctgagccagcgagttcgccttggcacggaccagcagtgccttctgcgctgcct 1104
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>dbj|AK059097.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-C06, full
            insert sequence
          Length = 1421

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 346  ccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcct 403
            |||||||| || |||||||| ||||||||||| | || ||| |||| |||||| ||||
Sbjct: 1162 ccgagctgagccagcgagttcgccttggcacggaccagcagtgccttctgcgctgcct 1105
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>gb|AY106811.1| Zea mays PCO109530 mRNA sequence
          Length = 1545

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 346  ccgagctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcct 403
            |||||||| || |||||||||||||| || |||| || ||| |||| |||||| ||||
Sbjct: 1174 ccgagctgggccagcgagttggcctttgcgcgcaccagcagggccttctgcgctgcct 1117
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 313   gcctcggcggcctcgccgtcgc 334
             ||||||||||||||||||||||
Sbjct: 73235 gcctcggcggcctcgccgtcgc 73214
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>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 313   gcctcggcggcctcgccgtcgc 334
             ||||||||||||||||||||||
Sbjct: 40487 gcctcggcggcctcgccgtcgc 40508
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>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16
          Length = 349260

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 312    ggcctcggcggcctcgccgtcg 333
              ||||||||||||||||||||||
Sbjct: 314156 ggcctcggcggcctcgccgtcg 314135
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>emb|BX826872.1|CNS0A43J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB70ZH08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1313

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 336  ggtgtactttccgagctgcgcgagcgagttggccttggcacg 377
            |||||| ||||||||||| || | ||| ||||||||||||||
Sbjct: 1192 ggtgtattttccgagctgagccaacgaattggccttggcacg 1151
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>gb|AC145945.2| Gallus gallus chromosome UNK clone CH261-23M4, complete sequence
          Length = 199148

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 214   atatcatgcatctttctgctt 234
             |||||||||||||||||||||
Sbjct: 59750 atatcatgcatctttctgctt 59770
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>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome
          Length = 1499920

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 159    gatctagaaaatacagtaatc 179
              |||||||||||||||||||||
Sbjct: 514505 gatctagaaaatacagtaatc 514485
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>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 312    ggcctcggcggcctcgccgtcgctg 336
              |||||||||| ||||||||||||||
Sbjct: 268661 ggcctcggcgccctcgccgtcgctg 268637
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>gb|AC009039.7| Homo sapiens chromosome 16 clone RP11-152O14, complete sequence
          Length = 163228

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 160   atctagaaaatacagtaatcatcat 184
             ||||| |||||||||||||||||||
Sbjct: 76537 atctacaaaatacagtaatcatcat 76513
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>gb|BT017456.1| Zea mays clone EL01N0407B10.c mRNA sequence
          Length = 859

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 46/55 (83%)
 Strand = Plus / Minus

                                                                  
Query: 349 agctgcgcgagcgagttggccttggcacgcagcaacagcgcctnctgcgccgcct 403
           ||||| || |||||||||||||| || |||| || ||| ||||  ||||||||||
Sbjct: 666 agctgtgccagcgagttggcctttgcgcgcaccagcagggccttttgcgccgcct 612
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>emb|CR751605.10| Zebrafish DNA sequence from clone DKEY-25J15 in linkage group 14,
             complete sequence
          Length = 145610

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    acatgcaaaattttgcagta 59
             ||||||||||||||||||||
Sbjct: 74881 acatgcaaaattttgcagta 74862
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>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    cctcggcggcctcgccgtcg 333
              ||||||||||||||||||||
Sbjct: 198325 cctcggcggcctcgccgtcg 198344
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>emb|CT573019.12| Mouse DNA sequence from clone RP24-94G12 on chromosome 14, complete
              sequence
          Length = 136188

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      cttattatatttgtgcttta 20
              ||||||||||||||||||||
Sbjct: 126377 cttattatatttgtgcttta 126358


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,134,252
Number of Sequences: 3902068
Number of extensions: 3134252
Number of successful extensions: 61898
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61654
Number of HSP's gapped (non-prelim): 244
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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