| Clone Name | rbaal40o17 |
|---|---|
| Clone Library Name | barley_pub |
>WBP2_MOUSE (P97765) WW domain-binding protein 2 (WBP-2)| Length = 261 Score = 36.2 bits (82), Expect = 0.096 Identities = 24/94 (25%), Positives = 43/94 (45%) Frame = -3 Query: 674 KGTIYLSNIRMVFVAAKPIGNFFAFDMPLLYVHGEKFNQPIFHCNNISGFVEPVVPESQN 495 KGT+YL+ R++F++ K +F MP + + QP+F N F++ +V Sbjct: 47 KGTVYLTPYRVIFLS-KGKDAMQSFMMPFYLMKDCEIKQPVFGAN----FIKGIVKAEAG 101 Query: 494 RALYSTHTFKILFKEGGCGTFVPLFLNLITSVRR 393 + ++K+ F GG F L + + R Sbjct: 102 GGWEGSASYKLTFTAGGAIEFGQRMLQVASQASR 135
>WBP2_HUMAN (Q969T9) WW domain-binding protein 2 (WBP-2)| Length = 261 Score = 35.0 bits (79), Expect = 0.21 Identities = 25/94 (26%), Positives = 41/94 (43%) Frame = -3 Query: 674 KGTIYLSNIRMVFVAAKPIGNFFAFDMPLLYVHGEKFNQPIFHCNNISGFVEPVVPESQN 495 KGT+YL+ R++F++ K +F MP + + QP+F N I G V Sbjct: 47 KGTVYLTPYRVIFLS-KGKDAMQSFMMPFYLMKDCEIKQPVFGANYIKG----TVKAEAG 101 Query: 494 RALYSTHTFKILFKEGGCGTFVPLFLNLITSVRR 393 + ++K+ F GG F L + + R Sbjct: 102 GGWEGSASYKLTFTAGGAIEFGQRMLQVASQASR 135
>WBP2_RAT (Q8R478) WW domain-binding protein 2 (WBP-2)| Length = 262 Score = 34.7 bits (78), Expect = 0.28 Identities = 24/94 (25%), Positives = 42/94 (44%) Frame = -3 Query: 674 KGTIYLSNIRMVFVAAKPIGNFFAFDMPLLYVHGEKFNQPIFHCNNISGFVEPVVPESQN 495 KGT+YL+ R++F+ +K +F MP + + QP+F N F++ V Sbjct: 47 KGTVYLTPYRVIFL-SKGKDAMRSFMMPFYLMKDCEVKQPVFGAN----FIKGTVKAEAG 101 Query: 494 RALYSTHTFKILFKEGGCGTFVPLFLNLITSVRR 393 + ++K+ F GG F L + + R Sbjct: 102 GGWEGSASYKLTFTAGGAIEFGQQMLQVASQASR 135
>SEC16_SCHPO (O14029) Multidomain vesicle coat protein| Length = 1995 Score = 34.3 bits (77), Expect = 0.37 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%) Frame = -3 Query: 563 NQPIFHCNNISGFVEPVVPESQNRALYSTHTFKILFKEGGCGTFVPLF---LNLITSVRR 393 NQP+ H +N+ V PVV +++ L T + F G CGT V F L T+ + Sbjct: 1061 NQPLLH-SNLHSPVSPVVDSNEDSRLKFLSTQRPAFSFGPCGTIVMAFSTPSGLYTTSGK 1119 Query: 392 HNQFEAQPATVPRV 351 +F A P + ++ Sbjct: 1120 GTKFIAGPIKIEKL 1133
>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth factor-like domains 2) (Epidermal growth factor-like 1) Length = 3312 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Frame = -2 Query: 516 GCSRKPEQGFVLHPHLQDLVQGRWMWHLC----ATLPEPDHVSAAPQSV*SPACYRAPCG 349 G + + QG V +QG W+ A LP V+A P V + AC PC Sbjct: 1903 GSAEEAPQGLV------GCIQGVWLGSTPSGSPALLPPSHRVNAEPGCVVTNACASGPCP 1956 Query: 348 PHA 340 PHA Sbjct: 1957 PHA 1959
>C3AR_CAVPO (O88680) C3a anaphylatoxin chemotactic receptor (C3a-R) (C3AR)| Length = 475 Score = 30.0 bits (66), Expect = 6.9 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = -1 Query: 169 VFSTIYMWCTRAIYLFGVILVILS-EERGGSILLALSWTIVCLAVDSA 29 V TI++ C ++FGV+++ ++ E R G+ L LSW V +A+ SA Sbjct: 372 VVVTIFLICWAPYHVFGVLILFINPESRVGAAL--LSWDHVSIALASA 417
>ATF7_MOUSE (Q8R0S1) Cyclic AMP-dependent transcription factor ATF-7| (Activating transcription factor 7) (Transcription factor ATF-A) Length = 413 Score = 29.6 bits (65), Expect = 9.0 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = -3 Query: 557 PIFHCNNISGFVEPVVPESQNRALYSTHTFKILFKEGGCGTFVPLFLNLITSVRRHNQF- 381 P+ + +IS P+ E++ R L +T T ++ GGCG V ++T+ NQ Sbjct: 238 PVNNSGSISPSGHPMPSEAKMR-LKATLTHQVSSINGGCGMVVGTASTMVTARPEQNQIL 296 Query: 380 ----EAQPATVPRVDPMQ 339 +A P+V P Q Sbjct: 297 IQHPDAPSPAQPQVSPAQ 314
>ZSWM4_MOUSE (Q8C7B8) Zinc finger SWIM domain-containing protein 4| Length = 1101 Score = 29.6 bits (65), Expect = 9.0 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = +1 Query: 391 WRRTDVIRFRKSGTKVPHPPSLNKILKVW------VEYKALFWLSGTTGST 525 WRR +++R+ S PP+L I+K W VE + ++GTT +T Sbjct: 799 WRRREMVRWLVSCATEIGPPALMSIMKNWYSLFTPVEAVTIVAVTGTTHAT 849 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 114,665,837 Number of Sequences: 219361 Number of extensions: 2634403 Number of successful extensions: 6936 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 6663 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6930 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)