ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal41d06 |
|---|---|
| Clone Library Name | barley_pub |
>MGLL_HUMAN (Q99685) Monoglyceride lipase (EC 3.1.1.23) (MGL) (HU-K5)| (Lysophospholipase homolog) (Lysophospholipase-like) Length = 303 Score = 61.6 bits (148), Expect = 2e-09 Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 4/173 (2%) Frame = -3 Query: 642 SLAVILQASLYAHIRTRLEGIILTSPAVRVKPAHPIVGAV--APIFSLIAPKFQFKGANK 469 ++A++ A H G++L SP V P V A + +L+ P + Sbjct: 126 AIAILTAAERPGHFA----GMVLISPLVLANPESATTFKVLAAKVLNLVLPNLSLGPIDS 181 Query: 468 RGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLLHNLKKVTVPFVVLHGTAD 289 + SR+ + SDPL+ ++V G ++L S + L K+TVPF++L G+AD Sbjct: 182 SVL--SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSAD 239 Query: 288 RVTDPLASQELYREAASRHKDLRLYEGFLHDLLFE-PE-RDEIAADIIRWMDR 136 R+ D + L A S+ K L++YEG H L E PE + + +I W+ + Sbjct: 240 RLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQ 292
>MGLL_RAT (Q8R431) Monoglyceride lipase (EC 3.1.1.23) (MGL)| Length = 303 Score = 60.1 bits (144), Expect = 6e-09 Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 4/162 (2%) Frame = -3 Query: 597 TRLEGIILTSPAVRVKP--AHPIVGAVAPIFSLIAPKFQFKGANKRGIPVSRDPAALLAK 424 T G+IL SP + P A + A + + + P + + SR+ + + Sbjct: 137 THFSGMILISPLILANPESASTLKVLAAKLLNFVLPNISLGRIDSSVL--SRNKSEVDLY 194 Query: 423 YSDPLVYTGPIRVRTGHEILRISSYLLHNLKKVTVPFVVLHGTADRVTDPLASQELYREA 244 SDPL+ ++V G ++L S + + ++T+PF++L G+ADR+ D + L + Sbjct: 195 NSDPLICHAGVKVCFGIQLLNAVSRVERAMPRLTLPFLLLQGSADRLCDSKGAYLLMESS 254 Query: 243 ASRHKDLRLYEGFLHDLLFE-PE-RDEIAADIIRWMDRTLGL 124 S+ K L++YEG H L E PE + + +I W+ + + Sbjct: 255 PSQDKTLKMYEGAYHVLHKELPEVTNSVLHEINTWVSHRIAV 296
>MGLL_MOUSE (O35678) Monoglyceride lipase (EC 3.1.1.23) (MGL)| Length = 303 Score = 57.4 bits (137), Expect = 4e-08 Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 4/160 (2%) Frame = -3 Query: 597 TRLEGIILTSPAVRVKP--AHPIVGAVAPIFSLIAPKFQFKGANKRGIPVSRDPAALLAK 424 T G++L SP V P A + A + + + P + + SR+ + + Sbjct: 137 TYFSGMVLISPLVLANPESASTLKVLAAKLLNFVLPNMTLGRIDSSVL--SRNKSEVDLY 194 Query: 423 YSDPLVYTGPIRVRTGHEILRISSYLLHNLKKVTVPFVVLHGTADRVTDPLASQELYREA 244 SDPLV ++V G ++L + + + ++T+PF++L G+ADR+ D + L + Sbjct: 195 NSDPLVCRAGLKVCFGIQLLNAVARVERAMPRLTLPFLLLQGSADRLCDSKGAYLLMESS 254 Query: 243 ASRHKDLRLYEGFLHDLLFE-PE-RDEIAADIIRWMDRTL 130 S+ K L++YEG H L E PE + + ++ W+ + Sbjct: 255 RSQDKTLKMYEGAYHVLHRELPEVTNSVLHEVNSWVSHRI 294
>YKJ4_YEAST (P28321) Hypothetical 35.5 kDa protein in CWP1-MBR1 intergenic| region Length = 313 Score = 50.1 bits (118), Expect = 7e-06 Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 17/172 (9%) Frame = -3 Query: 600 RTRLEGIILTSPAVRVKPAHPIVGA----VAPIFSLIAPKFQFK-GANKRGIPVSRDPAA 436 + + G I + P + + P H + +AP+ + P+ + G + +GI + A Sbjct: 139 KNEISGYIGSGPLIILHP-HTMYNKPTQIIAPLLAKFLPRVRIDTGLDLKGITSDKAYRA 197 Query: 435 LLAKYSDPLVYTGPIRVRTGHEILRI--------SSYLLHNLKKVTVPFVVLHGTADRVT 280 L SDP+ R H+ ++ ++Y+ N K P V++HG D + Sbjct: 198 FLG--SDPMSVPLYGSFRQIHDFMQRGAKLYKNENNYIQKNFAK-DKPVVIMHGQDDTIN 254 Query: 279 DPLASQELYREAASRHKDLRLYEGFLHDLLFEPERDE----IAADIIRWMDR 136 DP S++ ++ S K+L+LY G H +F E DE + D+ +W+D+ Sbjct: 255 DPKGSEKFIQDCPSADKELKLYPGARHS-IFSLETDEVFNTVFNDMKQWLDK 305
>YNBC_ECOLI (P76092) Hypothetical protein ynbC| Length = 585 Score = 47.8 bits (112), Expect = 3e-05 Identities = 39/156 (25%), Positives = 69/156 (44%) Frame = -3 Query: 642 SLAVILQASLYAHIRTRLEGIILTSPAVRVKPAHPIVGAVAPIFSLIAPKFQFKGANKRG 463 S+ +L A+ + G++L SPA +VK P+ ++ + F F + +G Sbjct: 115 SVGAVLVATWIHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHRLRGLF-FINSYVKG 173 Query: 462 IPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLLHNLKKVTVPFVVLHGTADRV 283 ++ D + +DPL+ T I V ++ + S ++ + +T+P +L D V Sbjct: 174 RYLTHDRQRGASFNNDPLI-TRAIAVNILLDLYKTSERIIRDAAAITLPTQLLISGDDYV 232 Query: 282 TDPLASQELYREAASRHKDLRLYEGFLHDLLFEPER 175 + Y+ S K+L L GF HD L E R Sbjct: 233 VHRQPQIDFYQRLRSPLKELHLLPGFYHDTLGEENR 268
>PRXC_PSEFL (O31158) Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride| peroxidase) (CPO-F) (Chloroperoxidase F) Length = 273 Score = 40.4 bits (93), Expect = 0.005 Identities = 21/66 (31%), Positives = 40/66 (60%) Frame = -3 Query: 339 NLKKVTVPFVVLHGTADRVTDPLASQELYREAASRHKDLRLYEGFLHDLLFEPERDEIAA 160 +LKK+ VP +V+HG AD+V P+ + + A + L++Y G H L + +D++ A Sbjct: 208 DLKKIDVPTLVVHGDADQVV-PIEASGIASAALVKGSTLKIYSGAPHGLT-DTHKDQLNA 265 Query: 159 DIIRWM 142 D++ ++ Sbjct: 266 DLLAFI 271
>APTH1_YARLI (Q6CGL4) Acyl-protein thioesterase 1 (EC 3.1.2.-)| Length = 227 Score = 37.0 bits (84), Expect = 0.059 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Frame = -3 Query: 360 ISSYLL--HNLKKVTVPFVVLHGTADRVT----DPLASQELYREAASRHKDLRLYEGFLH 199 I Y+L HN P + HGTAD+V L+ + E ++ D YEG H Sbjct: 148 IKDYILSQHNTTNQDTPMFLAHGTADQVIRFDYGKLSRDFIINELKFKNVDWHQYEGLTH 207 Query: 198 DLLFEPERDEIAADIIRWMDRTL 130 FE +DI+ W++ + Sbjct: 208 SCGFEE-----ISDILNWLEENI 225
>PRXC_PSEPY (P25026) Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride| peroxidase) (CPO-P) (Chloroperoxidase P) Length = 277 Score = 36.6 bits (83), Expect = 0.077 Identities = 21/66 (31%), Positives = 37/66 (56%) Frame = -3 Query: 339 NLKKVTVPFVVLHGTADRVTDPLASQELYREAASRHKDLRLYEGFLHDLLFEPERDEIAA 160 +LK +TVP +VLHG D++ P+A L ++ L+ Y G+ H +L D + A Sbjct: 212 DLKSITVPTLVLHGEDDQIV-PIADAALKSIKLLQNGTLKTYPGYSHGML-TVNADVLNA 269 Query: 159 DIIRWM 142 D++ ++ Sbjct: 270 DLLAFV 275
>COL39_CAEEL (Q09455) Cuticle collagen 39 precursor| Length = 323 Score = 34.7 bits (78), Expect = 0.29 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = -2 Query: 505 DCTQVPIQGSQQAGHPGVPRPCGAASKVL*PAGLHGADQGPYGPRDPA 362 +C + P AG PG P P G + P G QGP GPR PA Sbjct: 131 ECIKCPAGSPGPAGAPGAPGPQGPNGQPGHPG--QGGSQGPAGPRGPA 176
>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5| Length = 317 Score = 33.5 bits (75), Expect = 0.65 Identities = 20/48 (41%), Positives = 22/48 (45%) Frame = -2 Query: 505 DCTQVPIQGSQQAGHPGVPRPCGAASKVL*PAGLHGADQGPYGPRDPA 362 +C + P AG PG P P G PA HG QGP GP PA Sbjct: 130 ECIKCPQGAPGPAGAPGNPGPQGPNGNPGAPA--HGGGQGPPGPPGPA 175
>SPIC_HUMAN (Q8N5J4) Transcription factor Spi-C| Length = 248 Score = 33.5 bits (75), Expect = 0.65 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = -3 Query: 306 LHGTADRVTDPLASQE--LYREAASRHKDLRLYEGFLHDLLFEPERDEIAADIIRWMDRT 133 +H + +T+ Q L ++ K LRL+E +LH+ L+ PE A I+W+D+T Sbjct: 82 IHQSLQNITENQLVQPTLLQQKGGKGRKKLRLFE-YLHESLYNPEM----ASCIQWVDKT 136 Query: 132 LGL 124 G+ Sbjct: 137 KGI 139
>HIS61_SYNPX (Q7U5M8) Imidazole glycerol phosphate synthase subunit hisF1 (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF1) (ImGP synthase subunit hisF1) (IGPS subunit hisF1) Length = 256 Score = 33.1 bits (74), Expect = 0.85 Identities = 40/149 (26%), Positives = 58/149 (38%), Gaps = 29/149 (19%) Frame = -3 Query: 483 KGANKRGIPVSRDPAALLAKYS----DPLVYTGPIRVRTGHEILRISSYLLH-NLKKVTV 319 KG N G+ + DP L +YS D LV+ + + HE ++H + VT+ Sbjct: 19 KGVNFVGLRDAGDPVELACRYSGAGADELVF---LDIAASHEGRGTLIDMVHRTAESVTI 75 Query: 318 PFVVLHG--TADRVTDPLAS--------------QELYREAASRHK--------DLRLYE 211 PF V G T + +TD L + EL RE A R D R + Sbjct: 76 PFTVGGGISTVEGITDLLRAGADKVSLNSSAVRRPELVREGAERFGCQCIVVAIDARRRD 135 Query: 210 GFLHDLLFEPERDEIAADIIRWMDRTLGL 124 G D+ + R+ D + W R L Sbjct: 136 GDGWDVFVKGGRENTGLDAVDWARRVAEL 164
>BPA1_STRAU (P33912) Non-haem bromoperoxidase BPO-A1 (EC 1.11.1.-) (Bromide| peroxidase) (BPO1) Length = 274 Score = 33.1 bits (74), Expect = 0.85 Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Frame = -3 Query: 339 NLKKVTVPFVVLHGTADRVTDPLASQELYREAASRHKDLRLYEGFLHDLLFEP-ERDEIA 163 +LKK +P +V+HG D+V P+ + + +L++YEG H + P ++++ Sbjct: 207 DLKKFDIPTLVVHGDDDQVV-PIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFN 265 Query: 162 ADIIRWMDR 136 D++ ++++ Sbjct: 266 RDLLEFLNK 274
>EST_BACST (Q06174) Carboxylesterase precursor (EC 3.1.1.1)| Length = 247 Score = 33.1 bits (74), Expect = 0.85 Identities = 16/67 (23%), Positives = 34/67 (50%) Frame = -3 Query: 339 NLKKVTVPFVVLHGTADRVTDPLASQELYREAASRHKDLRLYEGFLHDLLFEPERDEIAA 160 +L + P V+ D + +P ++ +Y E S K ++ YE H + + E+D++ Sbjct: 177 HLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHE 236 Query: 159 DIIRWMD 139 DI +++ Sbjct: 237 DIYAFLE 243
>YLS6_CAEEL (P34391) Putative cuticle collagen F09G8.6| Length = 278 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 5/52 (9%) Frame = -2 Query: 502 CTQVPIQGSQQAGHPGVPRPCGAASKVL*PAGLHGAD-----QGPYGPRDPA 362 C Q P + AG PG P P G P G GAD GP GP PA Sbjct: 131 CIQCPAGEAGPAGAPGAPGPAG-------PDGQPGADGQGGAPGPAGPEGPA 175
>FPG_PROMA (Q7VDK6) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 282 Score = 32.7 bits (73), Expect = 1.1 Identities = 15/31 (48%), Positives = 16/31 (51%) Frame = +3 Query: 381 YGP*SAPCRPAGQSTLLAAPQGRGTPGCPAC 473 YG + PCR G L A GRGT CP C Sbjct: 250 YGRENKPCRKCGVKILKAKVAGRGTHWCPNC 280
>FPG_BACFI (P19210) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (FAPY-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 273 Score = 32.0 bits (71), Expect = 1.9 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = +3 Query: 381 YGP*SAPCRPAGQSTLLAAPQGRGTPGCPACWL 479 YG + PCR G L GRGT CP C L Sbjct: 241 YGRKNEPCRQCGTDILKTVVGGRGTHFCPNCQL 273
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 31.6 bits (70), Expect = 2.5 Identities = 19/46 (41%), Positives = 23/46 (50%) Frame = -2 Query: 472 QAGHPGVPRPCGAASKVL*PAGLHGADQGPYGPRDPAHLLLPAAQP 335 + G PG+P P G KV P G G D+GP GP P P +P Sbjct: 1000 ERGMPGLPGPAGTPGKV-GPTGATG-DKGPPGPVGPPGSNGPVGEP 1043
>FPG_OCEIH (Q8EPE6) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 279 Score = 31.2 bits (69), Expect = 3.2 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = +3 Query: 381 YGP*SAPCRPAGQSTLLAAPQGRGTPGCPAC 473 YG S PCR G + GRGT CP C Sbjct: 241 YGQHSKPCRVCGADIIKIKVGGRGTHLCPTC 271
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 30.8 bits (68), Expect = 4.2 Identities = 23/53 (43%), Positives = 23/53 (43%), Gaps = 5/53 (9%) Frame = -2 Query: 466 GHPGVPRPCGAASK-----VL*PAGLHGADQGPYGPRDPAHLLLPAAQPEEGD 323 GHPG P P G A K PAG GA GP G R P P Q GD Sbjct: 891 GHPGPPGPVGPAGKSGDRGETGPAGPSGA-PGPAGSRGP-----PGPQGPRGD 937
>CAF1_EPHMU (P18856) Collagen EMF1-alpha precursor (Fibrillar collagen)| (Fragment) Length = 547 Score = 30.8 bits (68), Expect = 4.2 Identities = 21/51 (41%), Positives = 25/51 (49%) Frame = -2 Query: 478 SQQAGHPGVPRPCGAASKVL*PAGLHGADQGPYGPRDPAHLLLPAAQPEEG 326 S +G PGVP P GAA K P + G GP GP P L P + +G Sbjct: 45 SGASGQPGVPGPVGAAGK---PGSIRG-QPGPPGP--PGDLGRPGERGAKG 89
>DGTP_SHIBO (Q59827) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 30.4 bits (67), Expect = 5.5 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 15/90 (16%) Frame = -3 Query: 405 YTGPIRVRTGHEILR---------ISSYLLHNLKKVTVPFVVLHGTA--DRVTDPLASQE 259 Y P V+T HEILR I+S + L++ T F + A R+T + Q+ Sbjct: 15 YRSPQGVKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSMEVQQ 74 Query: 258 LYR----EAASRHKDLRLYEGFLHDLLFEP 181 + R E SR K+L+L E + D L P Sbjct: 75 VGRYIAKEILSRMKELKLLEAYGLDELTGP 104
>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)| Length = 1708 Score = 30.0 bits (66), Expect = 7.2 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 2/77 (2%) Frame = -3 Query: 612 YAHIRTRLEGIILTSPAVRVKPAHPIVGAVAPIFSLIAPKFQFKGANKRGIPVSR--DPA 439 +AH RLE + + P +P +PI G AP +S + + R +R DP Sbjct: 128 HAHPSARLESLSQSPPKKETEPLYPIGGNGAPGYSSSMMREPRPASPPRETKHARAADPM 187 Query: 438 ALLAKYSDPLVYTGPIR 388 + + S P T PI+ Sbjct: 188 SFASILSGPTEETSPIK 204
>DGTP_SHIFL (Q83MD6) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 30.0 bits (66), Expect = 7.2 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 15/90 (16%) Frame = -3 Query: 405 YTGPIRVRTGHEILR---------ISSYLLHNLKKVTVPFVVLHGTA--DRVTDPLASQE 259 Y P V+T HEILR I+S + L++ T F + A R+T + Q+ Sbjct: 15 YRSPQGVKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSMEVQQ 74 Query: 258 LYR----EAASRHKDLRLYEGFLHDLLFEP 181 + R E SR K+L+L E + D L P Sbjct: 75 VGRYIAKEILSRLKELKLLEAYGLDELTGP 104
>DGTP_ESCFE (Q59435) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 30.0 bits (66), Expect = 7.2 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 15/90 (16%) Frame = -3 Query: 405 YTGPIRVRTGHEILR---------ISSYLLHNLKKVTVPFVVLHGTA--DRVTDPLASQE 259 Y P V+T HEILR I+S + L++ T F + A R+T + Q+ Sbjct: 15 YRSPQGVKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSMEVQQ 74 Query: 258 LYR----EAASRHKDLRLYEGFLHDLLFEP 181 + R E SR K+L+L E + D L P Sbjct: 75 VGRYIAKEILSRLKELKLLEAYGLDELTGP 104
>DGTP_ECOLI (P15723) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 30.0 bits (66), Expect = 7.2 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 15/90 (16%) Frame = -3 Query: 405 YTGPIRVRTGHEILR---------ISSYLLHNLKKVTVPFVVLHGTA--DRVTDPLASQE 259 Y P V+T HEILR I+S + L++ T F + A R+T + Q+ Sbjct: 15 YRSPQGVKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSMEVQQ 74 Query: 258 LYR----EAASRHKDLRLYEGFLHDLLFEP 181 + R E SR K+L+L E + D L P Sbjct: 75 VGRYIAKEILSRLKELKLLEAYGLDELTGP 104
>DGTP_ECOL6 (Q8FL13) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 30.0 bits (66), Expect = 7.2 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 15/90 (16%) Frame = -3 Query: 405 YTGPIRVRTGHEILR---------ISSYLLHNLKKVTVPFVVLHGTA--DRVTDPLASQE 259 Y P V+T HEILR I+S + L++ T F + A R+T + Q+ Sbjct: 15 YRSPQGVKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSMEVQQ 74 Query: 258 LYR----EAASRHKDLRLYEGFLHDLLFEP 181 + R E SR K+L+L E + D L P Sbjct: 75 VGRYIAKEILSRLKELKLLEAYGLDELTGP 104
>DGTP_ECO57 (Q8X8Y9) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 30.0 bits (66), Expect = 7.2 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 15/90 (16%) Frame = -3 Query: 405 YTGPIRVRTGHEILR---------ISSYLLHNLKKVTVPFVVLHGTA--DRVTDPLASQE 259 Y P V+T HEILR I+S + L++ T F + A R+T + Q+ Sbjct: 15 YRSPQGVKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSMEVQQ 74 Query: 258 LYR----EAASRHKDLRLYEGFLHDLLFEP 181 + R E SR K+L+L E + D L P Sbjct: 75 VGRYIAKEILSRLKELKLLEAYGLDELTGP 104
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 29.6 bits (65), Expect = 9.4 Identities = 19/41 (46%), Positives = 20/41 (48%) Frame = -2 Query: 466 GHPGVPRPCGAASKVL*PAGLHGADQGPYGPRDPAHLLLPA 344 GHPG P P G PAG G D+G GP PA PA Sbjct: 1047 GHPGPPGPVG-------PAGKSG-DRGESGPAGPAGAPGPA 1079
>CS1A_MOUSE (Q8CG14) Complement C1s-A subcomponent precursor (EC 3.4.21.42) (C1| esterase) [Contains: Complement C1s-A subcomponent heavy chain; Complement C1s-A subcomponent light chain] Length = 688 Score = 29.6 bits (65), Expect = 9.4 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = -3 Query: 441 AALLAKYSDPLVYTGPIRVRTGHEILRISSYLLHNLKKVTVPFVVLHGTADRVTDP 274 A +L K SDPL+Y G + VRT LL N +++ V +H + + DP Sbjct: 474 AHVLEKISDPLMYVGTMSVRT---------TLLENAQRLYSKRVFIHPSWKKEDDP 520 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,853,987 Number of Sequences: 219361 Number of extensions: 1761677 Number of successful extensions: 5746 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 5373 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5739 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7082949625 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
