>KPPR_WHEAT (P26302) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19)|
           (Phosphopentokinase) (PRKase) (PRK)
          Length = 404

 Score =  101 bits (252), Expect = 6e-22
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = -3

Query: 415 NLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIIAER 269
           NLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIIAER
Sbjct: 346 NLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIIAER 394

>KPPR_ARATH (P25697) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19)|
           (Phosphopentokinase) (PRKase) (PRK)
          Length = 395

 Score = 97.8 bits (242), Expect = 9e-21
 Identities = 46/49 (93%), Positives = 48/49 (97%)
 Frame = -3

Query: 415 NLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIIAER 269
           NLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQ+IA +
Sbjct: 338 NLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQLIANK 386

>KPPR_MESCR (P27774) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19)|
           (Phosphopentokinase) (PRKase) (PRK)
          Length = 397

 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 44/49 (89%), Positives = 47/49 (95%)
 Frame = -3

Query: 415 NLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIIAER 269
           NLSTKFYGEVTQQMLKH DFPGSNNGTGLFQTIVGLKIRDL+EQ+IA +
Sbjct: 339 NLSTKFYGEVTQQMLKHQDFPGSNNGTGLFQTIVGLKIRDLFEQLIASK 387

>KPPR_SPIOL (P09559) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19)|
           (Phosphopentokinase) (PRKase) (PRK)
          Length = 402

 Score = 91.3 bits (225), Expect = 8e-19
 Identities = 41/49 (83%), Positives = 46/49 (93%)
 Frame = -3

Query: 415 NLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIIAER 269
           NLSTKFYGEVTQQMLKH +FPGSNNGTG FQTI+GLKIRDL+EQ++A R
Sbjct: 344 NLSTKFYGEVTQQMLKHQNFPGSNNGTGFFQTIIGLKIRDLFEQLVASR 392

>KPPR_CHLRE (P19824) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19)|
           (Phosphopentokinase) (PRKase) (PRK)
          Length = 375

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 35/46 (76%), Positives = 43/46 (93%)
 Frame = -3

Query: 415 NLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQII 278
           N S KFYGE+TQQMLK++ FPGSNNGTGLFQTIVGLK+R++YE+I+
Sbjct: 323 NTSAKFYGEITQQMLKNSGFPGSNNGTGLFQTIVGLKVREVYERIV 368

>KPPR_SYNY3 (P37101) Phosphoribulokinase (EC 2.7.1.19) (Phosphopentokinase)|
           (PRKase) (PRK)
          Length = 332

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 29/45 (64%), Positives = 40/45 (88%)
 Frame = -3

Query: 406 TKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIIAE 272
           TK+YGE+T+ +LKH D+PG++NGTGLFQ +VGLK+R +YEQ+ AE
Sbjct: 281 TKYYGEMTELLLKHKDYPGTDNGTGLFQVLVGLKMRKVYEQLTAE 325

>CARB_SULAC (Q4J8E8) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)|
            (Carbamoyl-phosphate synthetase ammonia chain)
          Length = 1052

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
 Frame = +3

Query: 66   HGEDFREVQNAGFHEFCSELSTVF*L*YIQTSHKKREDAHSH*VGDEMIHELEFGAHQTF 245
            +G     V+ AG H   + +S  F     +T HK +E  HS  +  E+  +  F     F
Sbjct: 769  YGVVLEHVEEAGVHSGDATISIPFKKLSPETVHKMKESIHS--ISRELNIKGPFNVQ--F 824

Query: 246  AASAGTPALSAM-ICS*RSLIFSPTIVWKRPVPLLLPG 356
                GTP +  M + + RS+ FS  +V K  + L L G
Sbjct: 825  VVKNGTPYIIEMNLRASRSMPFSSKVVGKNIIDLALTG 862

>PALFB_EUGGR (P84737) Photoactivated adenylate cyclase alpha-subunit-like|
           protein FB
          Length = 1019

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 257 RNAGPLSNDLFIEISNLQSYDSLEETCSIVAAWEVC 364
           RN  P+S ++ +  +++ S+  L E CS+   W +C
Sbjct: 605 RNLQPVSVEVVLLATDICSFTPLSEKCSLTEVWTIC 640

>PCYAA_EUGGR (Q8S9F2) Photoactivated adenylate cyclase subunit alpha (EC|
           4.6.1.1) (Photoactivated adenylyl cyclase alpha subunit)
          Length = 1019

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 257 RNAGPLSNDLFIEISNLQSYDSLEETCSIVAAWEVC 364
           RN  P+S ++ +  +++ S+  L E CS+   W +C
Sbjct: 605 RNLQPVSVEVVMLATDICSFTPLSEKCSLTEVWTIC 640

>PCYAA_ASTLO (Q76L34) Photoactivated adenylate cyclase subunit alpha (EC|
           4.6.1.1) (Photoactivated adenylyl cyclase alpha subunit)
          Length = 1019

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 257 RNAGPLSNDLFIEISNLQSYDSLEETCSIVAAWEVC 364
           RN  P+S ++ +  +++ S+  L E CS+   W +C
Sbjct: 605 RNLQPVSVEVVMLATDICSFTPLSERCSLTEVWTIC 640

>PALST_EUGGR (P84739) Photoactivated adenylate cyclase alpha-subunit-like|
           protein ST-
          Length = 1019

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 257 RNAGPLSNDLFIEISNLQSYDSLEETCSIVAAWEVC 364
           RN  P+S ++ +  +++ S+  L E CS+   W +C
Sbjct: 605 RNLQPVSVEVVMLATDICSFTPLSEKCSLTEVWTIC 640

>PAL1F_EUGGR (P84738) Photoactivated adenylate cyclase alpha-subunit-like|
           protein 1224-5/1F
          Length = 1019

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 257 RNAGPLSNDLFIEISNLQSYDSLEETCSIVAAWEVC 364
           RN  P+S ++ +  + + S+  L E CS+   W +C
Sbjct: 605 RNLQPVSVEVVMLATAISSFTPLSEKCSLTEVWTIC 640

>MA2C1_HUMAN (Q9NTJ4) Alpha-mannosidase 2C1 (EC 3.2.1.24) (Alpha-D-mannoside|
           mannohydrolase) (Mannosidase alpha class 2C member 1)
           (Alpha mannosidase 6A8B)
          Length = 1040

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = +3

Query: 201 DEMIHELEFGAHQTFAASAGTPALSAMICS*RSLIFSPTIVWKRPVPLLLPGKSACFSIC 380
           + M H  +  +H     SA   AL A       L+   T+ WKR   + LP      S+ 
Sbjct: 591 EAMCHYEDIRSHGNTLLSAAAAALCAGEPGPEGLLIVNTLPWKRIEVMALPKPGGAHSLA 650

Query: 381 CVTSP 395
            VT P
Sbjct: 651 LVTVP 655

>RPTN_MOUSE (P97347) Repetin|
          Length = 1130

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +3

Query: 9   NMGEDVH*NVLRGDIRDSHHGEDFREVQNAGFHEFCSE 122
           + G+  H +    +++ SHHG+  R+ QN+ +H   S+
Sbjct: 564 SQGQSFHFDQAGREVQGSHHGQTDRQSQNSNWHRTDSQ 601

>ATPF_MESVI (Q9MUT1) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I)|
          Length = 186

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -2

Query: 179 ILTFLVTSLNILQLEDGRKFTAELMKTCILNFSKILSMMRVS 54
           ILT + T L+ + L +G  F  ++ +T ILN + +L ++  S
Sbjct: 4   ILTNIFTILSRMSLAEGFGFNTDIFETNILNLAVVLGILLTS 45

>HHP2_SCHPO (P40236) Casein kinase I homolog hhp2 (EC 2.7.11.1)|
          Length = 400

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = -2

Query: 203 ITNSMRMSILTFLVTSLNILQLEDGRKFTAELMKTCILNFSKILSMMRVSYVSS 42
           +TNS    ++  L  SL  L    GRKFT   +KT +L   +++S  R+ YV S
Sbjct: 76  VTNSYNAMVMDLLGPSLEDLFCYCGRKFT---LKTVLLLADQLIS--RIEYVHS 124

>KPPR_PINPS (P81664) Phosphoribulokinase (EC 2.7.1.19) (Phosphopentokinase)|
           (PRKase) (PRK) (Fragments)
          Length = 35

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 403 KFYGEVTQQMLK 368
           KFYGEVTQQMLK
Sbjct: 12  KFYGEVTQQMLK 23

>TIG_SYMTH (Q67SK1) Trigger factor (TF)|
          Length = 429

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 231 PQIQVHESFHHQLNENEHPHVSCD*FEYITARRR*KVHCRTHENLHFEL 85
           P++ VH+  H  +++ EH        + IT     ++  +THE+LH EL
Sbjct: 304 PEVLVHDKVHDMIHDFEHQLAQ----QGITLDMWHQITGKTHEDLHKEL 348

>INADL_HUMAN (Q8NI35) InaD-like protein (Inadl protein) (hINADL)|
           (Pals1-associated tight junction protein) (Protein
           associated to tight junctions)
          Length = 1801

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 252 KQQKFDEPQIQVHESFHHQLNENEHPHVSCD*FEYITAR 136
           K++  DEP + + +SFH Q  E E    + +  E++T R
Sbjct: 822 KEELVDEPFLDLGKSFHSQQKEIEQSKEAWEMHEFLTPR 860

>GFI1_DROME (Q9N658) Zinc finger protein sens (Protein senseless)|
          Length = 541

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/71 (23%), Positives = 29/71 (40%)
 Frame = -1

Query: 384 HSKC*SMQTSQAATMEQVSSKLS*D*RLEISMNRSLLRGPAFLLKQQKFDEPQIQVHESF 205
           H K  S Q  Q     ++  +   D R   ++  +L+    F   + +  +PQ Q  +  
Sbjct: 309 HLKLKSEQPQQQQQQHRIKDEQQQDNRSAAAL-MNLVAAAEFGYMRNQHQQPQQQQQQQL 367

Query: 204 HHQLNENEHPH 172
           HHQ    +H H
Sbjct: 368 HHQQQPQQHQH 378


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,473,452
Number of Sequences: 219361
Number of extensions: 980305
Number of successful extensions: 2757
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2756
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)