ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal40n23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U83414.1|HVU83414 Hordeum vulgare cytosolic triosephosphate i... 176 8e-42
2emb|AJ278243.1|TAE278243 Triticum aestivum mRNA for triosephosph... 153 1e-34
3emb|Z26875.1|SCTRPIS S.cereale tpi gene for triosephosphate isom... 139 2e-30
4gb|BT016504.1| Zea mays clone Contig337 mRNA sequence 131 4e-28
5gb|AY103629.1| Zea mays PCO130270 mRNA sequence 131 4e-28
6gb|BT016352.1| Zea mays clone Contig185 mRNA sequence 113 1e-22
7ref|XM_462797.2| Oryza sativa (japonica cultivar-group), mRNA 98 6e-18
8dbj|AK060920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 6e-18
9gb|M87064.1|RICRIC Oryza sativa triosephosphate isomerase (Rictp... 98 6e-18
10dbj|AB120303.1| Hordeum vulgare TPI gene for cytosolic triosepho... 86 2e-14
11gb|L00371.1|MZETPI2 Zea mays triosephosphate isomerase 1 gene, e... 76 2e-11
12dbj|D00012.1|MZETPI Zea mays gene for triosephosphate isomerase,... 76 2e-11
13gb|AY438596.1| Solanum chacoense triose phosphate isomerase cyto... 70 1e-09
14emb|X83227.1|PHRNATIP1 P.hybrida mRNA for triosephosphate isomerase 66 2e-08
15gb|S46215.1| triose phosphate isomerase [Lactuca sativa=lettuce,... 66 2e-08
16dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-08
17dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-08
18dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-08
19gb|L04967.1|RICTPI2A Oryza sativa triosephosphate isomerase (Ric... 66 2e-08
20gb|S70730.1| triose phosphate isomerase=5.3.1.1 [Stellaria longi... 62 3e-07
21gb|DQ222496.1| Solanum tuberosum clone 104F01 triose phosphate i... 58 5e-06
22ref|NM_115402.2| Arabidopsis thaliana ATCTIMC (CYTOSOLIC TRIOSE ... 52 3e-04
23gb|AF375426.1| Arabidopsis thaliana AT3g55440/T22E16_100 mRNA, c... 52 3e-04
24gb|AY074822.1| Arabidopsis thaliana AT3g55440/T22E16_100 gene, c... 52 3e-04
25emb|BX823076.1|CNS0A641 Arabidopsis thaliana Full-length cDNA Co... 52 3e-04
26emb|BX824151.1|CNS0A5NJ Arabidopsis thaliana Full-length cDNA Co... 52 3e-04
27emb|BX822471.1|CNS0A5TW Arabidopsis thaliana Full-length cDNA Co... 52 3e-04
28emb|BX822560.1|CNS0A4PK Arabidopsis thaliana Full-length cDNA Co... 52 3e-04
29gb|AY089077.1| Arabidopsis thaliana clone 28516 mRNA, complete s... 52 3e-04
30gb|J04121.1|CSJTRIS Coptis japonica triosphosphate isomerase mRN... 52 3e-04
31gb|U02949.1|ATCTIMC Arabidopsis thaliana Columbia cytosolic trio... 52 3e-04
32emb|BX822665.1|CNS0A60L Arabidopsis thaliana Full-length cDNA Co... 44 0.075
33emb|BX824684.1|CNS0A5IR Arabidopsis thaliana Full-length cDNA Co... 44 0.075
34emb|BX824481.1|CNS0A5J8 Arabidopsis thaliana Full-length cDNA Co... 44 0.075
35emb|BX824472.1|CNS0A5GX Arabidopsis thaliana Full-length cDNA Co... 44 0.075
36gb|BT016240.1| Zea mays clone Contig73 mRNA sequence 40 1.2
37ref|XM_746048.1| Aspergillus fumigatus Af293 leucyl-tRNA synthet... 40 1.2
38emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, B... 40 1.2
39gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 38 4.6
40ref|XM_748216.1| Aspergillus fumigatus Af293 triosephosphate iso... 38 4.6
41emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 38 4.6
42emb|BX294145.1| Pirellula sp. strain 1 complete genome; segment ... 38 4.6
43emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 38 4.6
44gb|AF479769.1| Mycobacterium bovis BCG F420 biosynthesis protein... 38 4.6
45ref|XM_319809.2| Anopheles gambiae str. PEST ENSANGP00000016530 ... 38 4.6
46gb|AD000020.1|MSGY348 Mycobacterium tuberculosis sequence from c... 38 4.6 
>gb|U83414.1|HVU83414 Hordeum vulgare cytosolic triosephosphate isomerase mRNA, complete
           cds
          Length = 1028

 Score =  176 bits (89), Expect = 8e-42
 Identities = 98/102 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagaatgacccagggaacgccaaggttggcaagcatctcancactgacttcaccggtgaa 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 342 aagaatgacccagggaacgccaaggttggcaagcatctcagcactgacttcaccggtgaa 283

                                                     
Query: 61  agcaccgcccttcttcacccagcagtgnngagcagcaacttg 102
           ||||||||||||||||||||||||||   |||||||||||||
Sbjct: 282 agcaccgcccttcttcacccagcagttctgagcagcaacttg 241
to top
>emb|AJ278243.1|TAE278243 Triticum aestivum mRNA for triosephosphat-isomerase (tpis gene)
          Length = 762

 Score =  153 bits (77), Expect = 1e-34
 Identities = 92/98 (93%)
 Strand = Plus / Minus

                                                                       
Query: 5   atgacccagggaacgccaaggttggcaagcatctcancactgacttcaccggtgaaagca 64
           ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 278 atgacccagggaacgccgaggttgacaagcatctcagcactgacttcaccggtgaaagca 219

                                                 
Query: 65  ccgcccttcttcacccagcagtgnngagcagcaacttg 102
           ||||||||||||||||||||||   |||||||||||||
Sbjct: 218 ccgcccttcttcacccagcagttctgagcagcaacttg 181
to top
>emb|Z26875.1|SCTRPIS S.cereale tpi gene for triosephosphate isomerase
          Length = 1033

 Score =  139 bits (70), Expect = 2e-30
 Identities = 91/99 (91%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagaatgacccagggaacgccaaggttggcaagcatctcancactgacttcaccggtgaa 60
           ||||||||||||||||| ||| |||||| ||||||||||| ||||||||||||| |||||
Sbjct: 336 aagaatgacccagggaatgccgaggttgacaagcatctcagcactgacttcaccagtgaa 277

                                                  
Query: 61  agcaccgcccttcttcacccagcagtgnngagcagcaac 99
           ||||||||||||||||||||||||||   ||||||||||
Sbjct: 276 agcaccgcccttcttcacccagcagttctgagcagcaac 238
to top
>gb|BT016504.1| Zea mays clone Contig337 mRNA sequence
          Length = 1102

 Score =  131 bits (66), Expect = 4e-28
 Identities = 90/99 (90%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagaatgacccagggaacgccaaggttggcaagcatctcancactgacttcaccggtgaa 60
           |||||||||||||||||| ||||||||| | ||||||||| ||||||||||||| |||||
Sbjct: 374 aagaatgacccagggaacaccaaggttgacgagcatctcagcactgacttcaccagtgaa 315

                                                  
Query: 61  agcaccgcccttcttcacccagcagtgnngagcagcaac 99
           |||||| |||||||||||||||||||   ||||||||||
Sbjct: 314 agcacctcccttcttcacccagcagttctgagcagcaac 276
to top
>gb|AY103629.1| Zea mays PCO130270 mRNA sequence
          Length = 1473

 Score =  131 bits (66), Expect = 4e-28
 Identities = 90/99 (90%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagaatgacccagggaacgccaaggttggcaagcatctcancactgacttcaccggtgaa 60
           |||||||||||||||||| ||||||||| | ||||||||| ||||||||||||| |||||
Sbjct: 477 aagaatgacccagggaacaccaaggttgacgagcatctcagcactgacttcaccagtgaa 418

                                                  
Query: 61  agcaccgcccttcttcacccagcagtgnngagcagcaac 99
           |||||| |||||||||||||||||||   ||||||||||
Sbjct: 417 agcacctcccttcttcacccagcagttctgagcagcaac 379
to top
>gb|BT016352.1| Zea mays clone Contig185 mRNA sequence
          Length = 1053

 Score =  113 bits (57), Expect = 1e-22
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagaatgacccagggaacgccaaggttggcaagcatctcancactgacttcaccggtgaa 60
           |||||||||||||||||||||||||||| | ||||| ||| |||| | |||||| |||||
Sbjct: 702 aagaatgacccagggaacgccaaggttgacgagcatttcagcactaatttcaccagtgaa 761

                                                     
Query: 61  agcaccgcccttcttcacccagcagtgnngagcagcaacttg 102
            ||||| |||||||||||||||||||   |||||||||||||
Sbjct: 762 tgcacctcccttcttcacccagcagttctgagcagcaacttg 803
to top
>ref|XM_462797.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1089

 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagaatgacccagggaacgccaaggttggcaagcatctcancactgacttcaccggtgaa 60
           |||||| ||||||||||  | ||||||| ||||||||||| | ||||| |||||||||||
Sbjct: 370 aagaataacccagggaatactaaggttgacaagcatctcagcgctgacctcaccggtgaa 311

                                                     
Query: 61  agcaccgcccttcttcacccagcagtgnngagcagcaacttg 102
           ||| ||||||||||||||||| || |   |||||||||||||
Sbjct: 310 agccccgcccttcttcacccaacaattctgagcagcaacttg 269
to top
>dbj|AK060920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H02, full
           insert sequence
          Length = 1083

 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagaatgacccagggaacgccaaggttggcaagcatctcancactgacttcaccggtgaa 60
           |||||| ||||||||||  | ||||||| ||||||||||| | ||||| |||||||||||
Sbjct: 364 aagaataacccagggaatactaaggttgacaagcatctcagcgctgacctcaccggtgaa 305

                                                     
Query: 61  agcaccgcccttcttcacccagcagtgnngagcagcaacttg 102
           ||| ||||||||||||||||| || |   |||||||||||||
Sbjct: 304 agccccgcccttcttcacccaacaattctgagcagcaacttg 263
to top
>gb|M87064.1|RICRIC Oryza sativa triosephosphate isomerase (Rictpi) mRNA, complete cds
          Length = 1050

 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagaatgacccagggaacgccaaggttggcaagcatctcancactgacttcaccggtgaa 60
           |||||| ||||||||||  | ||||||| ||||||||||| | ||||| |||||||||||
Sbjct: 316 aagaataacccagggaatactaaggttgacaagcatctcagcgctgacctcaccggtgaa 257

                                                     
Query: 61  agcaccgcccttcttcacccagcagtgnngagcagcaacttg 102
           ||| ||||||||||||||||| || |   |||||||||||||
Sbjct: 256 agccccgcccttcttcacccaacaattctgagcagcaacttg 215
to top
>dbj|AB120303.1| Hordeum vulgare TPI gene for cytosolic triosephosphate isomerase,
           partial cds
          Length = 646

 Score = 85.7 bits (43), Expect = 2e-14
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                    
Query: 44  ctgacttcaccggtgaaagcaccgcccttcttcacccagcagtgnngagcagcaact 100
           |||||||||||||| ||||||||||||||||||||||||||||   |||||||||||
Sbjct: 304 ctgacttcaccggtaaaagcaccgcccttcttcacccagcagttctgagcagcaact 248



 Score = 38.2 bits (19), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 25  gttggcaagcatctcancactg 46
           |||||||||||||||| |||||
Sbjct: 646 gttggcaagcatctcagcactg 625
to top
>gb|L00371.1|MZETPI2 Zea mays triosephosphate isomerase 1 gene, exon 2-9 and complete
           cds
          Length = 2870

 Score = 75.8 bits (38), Expect = 2e-11
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 44  ctgacttcaccggtgaaagcaccgcccttcttcacccagcagtgnngagcagcaac 99
           ||||||||||| ||||||||||| |||||||||||||||||||   ||||||||||
Sbjct: 505 ctgacttcaccagtgaaagcacctcccttcttcacccagcagttctgagcagcaac 450



 Score = 61.9 bits (31), Expect = 3e-07
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 1   aagaatgacccagggaacgccaaggttggcaagcatctcancactg 46
           |||||||||||||||||| ||||||||| | ||||||||| |||||
Sbjct: 873 aagaatgacccagggaacaccaaggttgacgagcatctcagcactg 828
to top
>dbj|D00012.1|MZETPI Zea mays gene for triosephosphate isomerase, complete cds
          Length = 3770

 Score = 75.8 bits (38), Expect = 2e-11
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 44   ctgacttcaccggtgaaagcaccgcccttcttcacccagcagtgnngagcagcaac 99
            ||||||||||| ||||||||||| |||||||||||||||||||   ||||||||||
Sbjct: 1405 ctgacttcaccagtgaaagcacctcccttcttcacccagcagttctgagcagcaac 1350



 Score = 61.9 bits (31), Expect = 3e-07
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 1    aagaatgacccagggaacgccaaggttggcaagcatctcancactg 46
            |||||||||||||||||| ||||||||| | ||||||||| |||||
Sbjct: 1773 aagaatgacccagggaacaccaaggttgacgagcatctcagcactg 1728
to top
>gb|AY438596.1| Solanum chacoense triose phosphate isomerase cytosolic isoform
           mRNA, complete cds
          Length = 1079

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                       
Query: 4   aatgacccagggaacgccaaggttggcaagcatctcancactgacttcaccggtgaaagc 63
           ||||||||| |||| ||| || ||  ||||||| ||| |||| |||||||||||||||||
Sbjct: 350 aatgacccacggaatgcccagattaacaagcatatcagcactaacttcaccggtgaaagc 291

                             
Query: 64  accgcccttcttcaccca 81
           ||| |||||||| |||||
Sbjct: 290 accccccttcttaaccca 273
to top
>emb|X83227.1|PHRNATIP1 P.hybrida mRNA for triosephosphate isomerase
          Length = 1002

 Score = 65.9 bits (33), Expect = 2e-08
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcaccca 81
           ||||||||||| |||| |||||||||||||||||||| || ||||| |||||
Sbjct: 253 caagcatctcagcactaacttcaccggtgaaagcaccccctttcttaaccca 202
to top
>gb|S46215.1| triose phosphate isomerase [Lactuca sativa=lettuce, mRNA Partial,
          785 nt]
          Length = 785

 Score = 65.9 bits (33), Expect = 2e-08
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                  
Query: 26 ttggcaagcatctcancactgacttcaccggtgaaagcaccgcccttcttcaccca 81
          ||||||||||||||| |||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 80 ttggcaagcatctcagcactaacctcaccggtgaatgcaccacccttcttaaccca 25
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 2e-08
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                          
Query: 44      ctgacttcaccggtgaaagcaccgcccttcttcacccagcagtgnngagcagcaacttg 102
               ||||| |||||||||||||| ||||||||||||||||| || |   |||||||||||||
Sbjct: 2591040 ctgacctcaccggtgaaagccccgcccttcttcacccaacaattctgagcagcaacttg 2591098



 Score = 40.1 bits (20), Expect = 1.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 1       aagaatgacccagggaacgccaaggttggcaagcatctca 40
               |||||| ||||||||||  | ||||||| |||||||||||
Sbjct: 2590643 aagaataacccagggaatactaaggttgacaagcatctca 2590682
to top
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0416D03
          Length = 157112

 Score = 65.9 bits (33), Expect = 2e-08
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                         
Query: 44     ctgacttcaccggtgaaagcaccgcccttcttcacccagcagtgnngagcagcaacttg 102
              ||||| |||||||||||||| ||||||||||||||||| || |   |||||||||||||
Sbjct: 145461 ctgacctcaccggtgaaagccccgcccttcttcacccaacaattctgagcagcaacttg 145519



 Score = 40.1 bits (20), Expect = 1.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 1      aagaatgacccagggaacgccaaggttggcaagcatctca 40
              |||||| ||||||||||  | ||||||| |||||||||||
Sbjct: 145064 aagaataacccagggaatactaaggttgacaagcatctca 145103
to top
>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0434B04
          Length = 167029

 Score = 65.9 bits (33), Expect = 2e-08
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 44    ctgacttcaccggtgaaagcaccgcccttcttcacccagcagtgnngagcagcaacttg 102
             ||||| |||||||||||||| ||||||||||||||||| || |   |||||||||||||
Sbjct: 40815 ctgacctcaccggtgaaagccccgcccttcttcacccaacaattctgagcagcaacttg 40873



 Score = 40.1 bits (20), Expect = 1.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 1     aagaatgacccagggaacgccaaggttggcaagcatctca 40
             |||||| ||||||||||  | ||||||| |||||||||||
Sbjct: 40418 aagaataacccagggaatactaaggttgacaagcatctca 40457
to top
>gb|L04967.1|RICTPI2A Oryza sativa triosephosphate isomerase (Rictipi2) gene, exons 1-9
          Length = 4127

 Score = 65.9 bits (33), Expect = 2e-08
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 44   ctgacttcaccggtgaaagcaccgcccttcttcacccagcagtgnngagcagcaacttg 102
            ||||| |||||||||||||| ||||||||||||||||| || |   |||||||||||||
Sbjct: 1882 ctgacctcaccggtgaaagccccgcccttcttcacccaacaattctgagcagcaacttg 1824



 Score = 40.1 bits (20), Expect = 1.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 1    aagaatgacccagggaacgccaaggttggcaagcatctca 40
            |||||| ||||||||||  | ||||||| |||||||||||
Sbjct: 2279 aagaataacccagggaatactaaggttgacaagcatctca 2240
to top
>gb|S70730.1| triose phosphate isomerase=5.3.1.1 [Stellaria longipes, mRNA, 1064
           nt]
          Length = 1064

 Score = 61.9 bits (31), Expect = 3e-07
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                       
Query: 42  cactgacttcaccggtgaaagcaccgcccttcttcacccagcagtgnngagcagcaactt 101
           ||||||||||||| ||||||||||| || ||||| ||||||||||   ||||||| ||||
Sbjct: 288 cactgacttcaccagtgaaagcaccccctttcttgacccagcagttctgagcagccactt 229

            
Query: 102 g 102
           |
Sbjct: 228 g 228
to top
>gb|DQ222496.1| Solanum tuberosum clone 104F01 triose phosphate isomerase cytosolic
           isoform-like mRNA, complete cds
          Length = 934

 Score = 58.0 bits (29), Expect = 5e-06
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcaccca 81
           ||||||| ||| |||| ||||||||||||||||| || |||||||| |||||
Sbjct: 253 caagcatatcagcactaacttcaccggtgaaagcgccccccttcttaaccca 202
to top
>ref|NM_115402.2| Arabidopsis thaliana ATCTIMC (CYTOSOLIC TRIOSE PHOSPHATE
           ISOMERASE); triose-phosphate isomerase AT3G55440
           (ATCTIMC) mRNA, complete cds
          Length = 1347

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||  |||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 353 caagcatctccgcactcacttcaccagtgaaagcacctcctttcttaacccaacagt 297
to top
>gb|AF375426.1| Arabidopsis thaliana AT3g55440/T22E16_100 mRNA, complete cds
          Length = 1068

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||  |||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 347 caagcatctccgcactcacttcaccagtgaaagcacctcctttcttaacccaacagt 291
to top
>gb|AY074822.1| Arabidopsis thaliana AT3g55440/T22E16_100 gene, complete cds
          Length = 765

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||  |||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 253 caagcatctccgcactcacttcaccagtgaaagcacctcctttcttaacccaacagt 197
to top
>emb|BX823076.1|CNS0A641 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB88ZC01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 978

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||  |||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 329 caagcatctccgcactcacttcaccagtgaaagcacctcctttcttaacccaacagt 273
to top
>emb|BX824151.1|CNS0A5NJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH26ZF04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1043

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||  |||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 336 caagcatctccgcactcacttcaccagtgaaagcacctcctttcttaacccaacagt 280
to top
>emb|BX822471.1|CNS0A5TW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB3ZE09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1020

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||  |||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 343 caagcatctccgcactcacttcaccagtgaaagcacctcctttcttaacccaacagt 287
to top
>emb|BX822560.1|CNS0A4PK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB49ZA03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1005

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||  |||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 343 caagcatctccgcactcacttcaccagtgaaagcacctcctttcttaacccaacagt 287
to top
>gb|AY089077.1| Arabidopsis thaliana clone 28516 mRNA, complete sequence
          Length = 1007

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||  |||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 353 caagcatctccgcactcacttcaccagtgaaagcacctcctttcttaacccaacagt 297
to top
>gb|J04121.1|CSJTRIS Coptis japonica triosphosphate isomerase mRNA, complete cds
          Length = 915

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagaatgacccagggaacgccaaggttggcaagcatctcancactgacttcaccggtgaa 60
           |||||| ||||| |||| ||| |  ||| ||||||||||  |||| || |||||||||||
Sbjct: 282 aagaatcacccaaggaatgcccaaattgacaagcatctccgcactaacctcaccggtgaa 223

                                
Query: 61  agcaccgcccttcttcaccca 81
           |||||| || ||||| |||||
Sbjct: 222 agcaccacctttcttaaccca 202
to top
>gb|U02949.1|ATCTIMC Arabidopsis thaliana Columbia cytosolic triose phosphate isomerase
           (Atctimc) mRNA, complete cds
          Length = 1056

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||  |||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 335 caagcatctccgcactcacttcaccagtgaaagcacctcctttcttaacccaacagt 279
to top
>emb|BX822665.1|CNS0A60L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB57ZC03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1062

 Score = 44.1 bits (22), Expect = 0.075
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||   ||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 343 caagcatctccgaactcacttcaccagtgaaagcacctcctttcttaacccaacagt 287
to top
>emb|BX824684.1|CNS0A5IR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH64ZD04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1198

 Score = 44.1 bits (22), Expect = 0.075
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||   ||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 306 caagcatctccgaactcacttcaccagtgaaagcacctcctttcttaacccaacagt 250
to top
>emb|BX824481.1|CNS0A5J8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH50ZG09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1037

 Score = 44.1 bits (22), Expect = 0.075
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||   ||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 323 caagcatctccgaactcacttcaccagtgaaagcacctcctttcttaacccaacagt 267
to top
>emb|BX824472.1|CNS0A5GX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH50ZD09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1005

 Score = 44.1 bits (22), Expect = 0.075
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 30  caagcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||||   ||| |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 323 caagcatctccgaactcacttcaccagtgaaagcacctcctttcttaacccaacagt 267
to top
>gb|BT016240.1| Zea mays clone Contig73 mRNA sequence
          Length = 1104

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 46/55 (83%)
 Strand = Plus / Minus

                                                                  
Query: 32  agcatctcancactgacttcaccggtgaaagcaccgcccttcttcacccagcagt 86
           ||||||||| ||||||  || |||||||| || ||||||||   |||||||||||
Sbjct: 337 agcatctcagcactgatctcgccggtgaaggcgccgcccttgcgcacccagcagt 283
to top
>ref|XM_746048.1| Aspergillus fumigatus Af293 leucyl-tRNA synthetase (Afu6g12630)
            partial mRNA
          Length = 3384

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   gaacgccaaggttggcaagc 34
            ||||||||||||||||||||
Sbjct: 3063 gaacgccaaggttggcaagc 3082
to top
>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16
          Length = 103240

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 47    acttcaccggtgaaagcaccgcccttcttcacccagcagt 86
             |||||||| ||||||||||| || ||||| ||||| ||||
Sbjct: 37120 acttcaccagtgaaagcacctcctttcttaacccaacagt 37081
to top
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 18      cgccaaggttggcaagcatctca 40
               ||||||||||||| |||||||||
Sbjct: 1302347 cgccaaggttggccagcatctca 1302369
to top
>ref|XM_748216.1| Aspergillus fumigatus Af293 triosephosphate isomerase (Afu5g13450)
           partial mRNA
          Length = 771

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 49  ttcaccggtgaaagcaccg 67
           |||||||||||||||||||
Sbjct: 228 ttcaccggtgaaagcaccg 210
to top
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 18     cgccaaggttggcaagcatctca 40
              ||||||||||||| |||||||||
Sbjct: 269072 cgccaaggttggccagcatctca 269094
to top
>emb|BX294145.1| Pirellula sp. strain 1 complete genome; segment 13/24
          Length = 300350

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 45     tgacttcaccggtgaaagcaccg 67
              |||||||||||||||| ||||||
Sbjct: 131032 tgacttcaccggtgaaggcaccg 131054
to top
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14
          Length = 327650

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 18     cgccaaggttggcaagcatctca 40
              ||||||||||||| |||||||||
Sbjct: 317232 cgccaaggttggccagcatctca 317254
to top
>gb|AF479769.1| Mycobacterium bovis BCG F420 biosynthesis protein FbiC (fbiC) gene,
           complete cds
          Length = 2965

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 18  cgccaaggttggcaagcatctca 40
           ||||||||||||| |||||||||
Sbjct: 149 cgccaaggttggccagcatctca 171
to top
>ref|XM_319809.2| Anopheles gambiae str. PEST ENSANGP00000016530 (ENSANGG00000014041),
            partial mRNA
          Length = 2214

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 66   cgcccttcttcacccagca 84
            |||||||||||||||||||
Sbjct: 1445 cgcccttcttcacccagca 1463
to top
>gb|AD000020.1|MSGY348 Mycobacterium tuberculosis sequence from clone y348
          Length = 40056

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 18    cgccaaggttggcaagcatctca 40
             ||||||||||||| |||||||||
Sbjct: 32396 cgccaaggttggccagcatctca 32418


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 483,609
Number of Sequences: 3902068
Number of extensions: 483609
Number of successful extensions: 32747
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32667
Number of HSP's gapped (non-prelim): 80
length of query: 104
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 83
effective length of database: 17,151,101,840
effective search space: 1423541452720
effective search space used: 1423541452720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top