>SUCP_AGRVI (P33910) Sucrose phosphorylase (EC 2.4.1.7) (Sucrose|
           glucosyltransferase)
          Length = 488

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
 Frame = -1

Query: 431 RVGLWGSIRALARGYEIIMGLLLFTPIAFLAWF-PFV-----SEFQTR-MLFNQAFSRGL 273
           R+G W  +RALA   EI+  L++    A  +WF  F+     SEF    M F +AF RG 
Sbjct: 64  RLGSWDDVRALAGSVEIMADLIVNHVSAQSSWFQDFIAKGSDSEFADMFMTFGKAFPRGA 123

Query: 272 QISRILGGHKKDRAARSKDDR 210
               +L  ++     R +  R
Sbjct: 124 SEQDLLNIYRPRLGCRFQRPR 144

>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system|
           defective) (Homeobox protein NK-2)
          Length = 723

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 252 TQDPRDLQTTAEGLVEEHPSLELRHEREPRQER-DRGEEQQPHD 380
           T  P    T    L    PSLE + ERE R++R DR E Q+ H+
Sbjct: 41  TVSPSSPATPKRPLRTSTPSLERKREREDREDREDRKERQERHE 84

>GLYA2_BURPS (Q63MV1) Serine hydroxymethyltransferase 2 (EC 2.1.2.1) (Serine|
           methylase 2) (SHMT 2)
          Length = 424

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 364 SSSPMMISYPRARARIDPHSPTLMIAGFSA 453
           S   M+I Y +  A    H P+L+IAGFSA
Sbjct: 152 SRDTMLIDYDQVEALAQQHKPSLIIAGFSA 181

>GLYA2_BURP1 (Q3JGP5) Serine hydroxymethyltransferase 2 (EC 2.1.2.1) (Serine|
           methylase 2) (SHMT 2)
          Length = 424

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 364 SSSPMMISYPRARARIDPHSPTLMIAGFSA 453
           S   M+I Y +  A    H P+L+IAGFSA
Sbjct: 152 SRDTMLIDYDQVEALAQQHKPSLIIAGFSA 181

>MAF_RAT (P54844) Transcription factor Maf (Proto-oncogene c-maf)|
          Length = 369

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = -3

Query: 486 ANGMGPAPRGSGTEAGDHEGGAVGVDPGSSSWVRDHHGAAALH 358
           A+G G A  G    AG   GG  G   G+   +  HH A  LH
Sbjct: 210 ASGAGGAGGGGPASAGGGGGGGGGGTAGAGGALHPHHAAGGLH 252

>MAF_HUMAN (O75444) Transcription factor Maf (Proto-oncogene c-maf)|
          Length = 403

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 17/43 (39%), Positives = 19/43 (44%)
 Frame = -3

Query: 486 ANGMGPAPRGSGTEAGDHEGGAVGVDPGSSSWVRDHHGAAALH 358
           A G GPA  G G   G   GG  G   G+   +  HH A  LH
Sbjct: 216 AGGGGPASAGGGGGGGG--GGGGGGAAGAGGALHPHHAAGGLH 256

>GLYA2_RALEJ (Q46RR4) Serine hydroxymethyltransferase 2 (EC 2.1.2.1) (Serine|
           methylase 2) (SHMT 2)
          Length = 424

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 355 GVKSSSPMMISYPRARARIDPHSPTLMIAGFSA 453
           GV   S M+I Y +  A    H P+L+IAGFSA
Sbjct: 150 GVNRES-MLIDYDQVEALAKEHKPSLIIAGFSA 181

>GLYA2_BURMA (Q62DI5) Serine hydroxymethyltransferase 2 (EC 2.1.2.1) (Serine|
           methylase 2) (SHMT 2)
          Length = 424

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 364 SSSPMMISYPRARARIDPHSPTLMIAGFSA 453
           S   M++ Y +  A    H P+L+IAGFSA
Sbjct: 152 SRDTMLLDYDQVEALAQQHKPSLIIAGFSA 181

>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)|
            (SMART/HDAC1-associated repressor protein)
          Length = 3664

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 21/83 (25%), Positives = 33/83 (39%)
 Frame = -3

Query: 468  APRGSGTEAGDHEGGAVGVDPGSSSWVRDHHGAAALHXXXXXXXXXXXXXXXDSDALQPG 289
            +PRG+  +AG+ E G V V P  S   +   G ++                  SD + P 
Sbjct: 2101 SPRGAAAQAGERESGVVAVSPEKSESPQKEDGLSS---------------QLKSDPVDPD 2145

Query: 288  LQPWSADLEDPGWAQEGPGGAEQ 220
             +P   D+   G + E    A+Q
Sbjct: 2146 KEPEKEDVSASGPSPEATQLAKQ 2168

>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)|
          Length = 1117

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
 Frame = +3

Query: 9   KHTLLLLQTRPCIHMIILCTTTTLPMQFAAWNTYIH--------TTDKPQPLQPSSMPT 161
           + T++LL  +   H + L  T    MQFA W T IH        T  +P PLQ    P+
Sbjct: 326 EETIILLPDKS--HFVFLSATIPNAMQFAEWITKIHRQPCHVVYTDFRPTPLQHYLFPS 382

>APX1_CAEEL (P41990) Anterior pharynx in excess protein 1 precursor|
          Length = 515

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 107 CIPGCKLHWQCSSSAQDNHMDAWSG 33
           CI   KLHW+CS+         WSG
Sbjct: 145 CIANAKLHWECSTHGVRRCSAGWSG 169

>TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containing protein 1|
           (RECS1 protein) (Responsive to centrifugal force and
           shear stress gene 1 protein)
          Length = 309

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -2

Query: 151 LDGCSGCGLSVVCMYVFQAANCIGNVVVVHKIIIWMHGLVCSSSSVCLT 5
           +D  S  GL  V   V      + ++V++ K I W+H +  +  ++C T
Sbjct: 212 VDFTSCTGLFCVLGIVLMVTGIVTSIVLIFKYIYWLHMVYAALGAICFT 260

>TWIST_DROVI (Q9TX44) Protein twist|
          Length = 519

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 21/85 (24%), Positives = 36/85 (42%)
 Frame = +3

Query: 267 DLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPTXXXXXXXXXXXXXXXRL 446
           D QT A  +  EH  L L+ +++ +Q++ + ++QQ + D +PT                 
Sbjct: 179 DCQTDALSMQPEHKKL-LQQQQQQQQQQQQQQQQQLYVDYLPTTVDEVAAAQTQAQAPTQ 237

Query: 447 QCLSHEEQAPSRWHEGKDADEYVLD 521
           Q       + S  H    ADE + D
Sbjct: 238 QSACLSPHSHSHSHFDFAADEELQD 262

>LEGA_PEA (P02857) Legumin A precursor [Contains: Legumin A alpha chain|
           (Legumin A acidic chain); Legumin A beta chain (Legumin
           A basic chain)]
          Length = 517

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 306 PSLELRHEREPRQERDRGEEQQP 374
           P  + RH+R  RQE D  EE+QP
Sbjct: 259 PEKQARHQRGSRQEEDEDEEKQP 281

>GLYA1_BURS3 (Q39A26) Serine hydroxymethyltransferase 1 (EC 2.1.2.1) (Serine|
           methylase 1) (SHMT 1)
          Length = 424

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 376 MMISYPRARARIDPHSPTLMIAGFSA 453
           M+I Y +  A    H P L+IAGFSA
Sbjct: 156 MLIDYDQVEALAHEHKPNLIIAGFSA 181

>HEPA_VZVD (P09300) DNA helicase/primase complex-associated protein|
          Length = 771

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
 Frame = +1

Query: 58  SCALL--LHCQCNLQPGIHTYI-----LLTSHNRYSHPA 153
           SCA +  + C  +L+P IHT++     LL +HN +S P+
Sbjct: 717 SCACIPPIDCAAHLKPLIHTFVTIINHLLDAHNDFSSPS 755

>GLYA2_BURTA (Q2T437) Serine hydroxymethyltransferase 2 (EC 2.1.2.1) (Serine|
           methylase 2) (SHMT 2)
          Length = 424

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 364 SSSPMMISYPRARARIDPHSPTLMIAGFSA 453
           S   M+I Y +       H P+L+IAGFSA
Sbjct: 152 SRDTMLIDYDQVEELAQQHKPSLIIAGFSA 181

>MNB_DROME (P49657) Serine/threonine-protein kinase minibrain (EC 2.7.12.1)|
          Length = 908

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 26/97 (26%), Positives = 31/97 (31%), Gaps = 5/97 (5%)
 Frame = -3

Query: 489 HANGMGPAPRGSGTEAGDHEGGAVGVDPGSSSWVRDHHGAA-----ALHXXXXXXXXXXX 325
           +A   G    G+G  +G   GG +G    SS  V     AA     A             
Sbjct: 502 NAGAGGSGSSGAGGSSGGGVGGGLGASNSSSGAVSSSSAAAPTAATAAATAAGSSGSGSS 561

Query: 324 XXXXDSDALQPGLQPWSADLEDPGWAQEGPGGAEQGR 214
                S A Q    P    L  P     GPGGA  G+
Sbjct: 562 VGGGSSAAQQQQAMPLPLPLPLPLPPLAGPGGASDGQ 598


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,489,647
Number of Sequences: 219361
Number of extensions: 1601243
Number of successful extensions: 6467
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6439
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)