>CISY_ASPNG (P51044) Citrate synthase, mitochondrial precursor (EC 2.3.3.1)|
          Length = 475

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 183 RSLAVPLAILSDTPKKLDAQVSAMESTVSAISPGLIVIESENHETAFSPA 332
           R L+   A  SD PK ++  +    ST+  +S   + + +  HE+AF+ A
Sbjct: 144 RDLSAEWAARSDLPKFIEELIDRCPSTLHPMSQFSLAVTALEHESAFAKA 193

>IDI2_LISMO (Q8Y7A5) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP|
           isomerase) (Isopentenyl pyrophosphate isomerase)
          Length = 358

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/74 (22%), Positives = 36/74 (48%)
 Frame = +3

Query: 114 FIALHTRQHTHTYTDNSELTYMYRSLAVPLAILSDTPKKLDAQVSAMESTVSAISPGLIV 293
           +I   T    HT   N+EL  + R +A+P+A+ S +    ++ +    + V  I+P  ++
Sbjct: 66  YINAMTGGSRHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMI 125

Query: 294 IESENHETAFSPAI 335
           + + + E A    +
Sbjct: 126 LANVSPEVAIQDGL 139

>VGLB_RHCM6 (P89053) Glycoprotein B precursor|
          Length = 854

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 268 ETVDSIADTCASSFLGVSERIARGTARDLYMYVSSELS 155
           + V+   +TC  +F   SER  R  A D Y Y SS ++
Sbjct: 308 DIVEEANNTCEYTFWEQSERTIRSEADDTYHYTSSSMT 345

>CISY_EMENI (O00098) Citrate synthase, mitochondrial precursor (EC 2.3.3.1)|
          Length = 474

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +3

Query: 183 RSLAVPLAILSDTPKKLDAQVSAMESTVSAISPGLIVIESENHETAFSPA 332
           R L+   A  SD PK ++  +  + ST+  ++   + + +  HE+AF+ A
Sbjct: 144 RDLSAEWAARSDLPKFIEELIDRVPSTLHPMAQFSLAVTALEHESAFAKA 193

>TRMU_YEAST (Q12093) Probable tRNA|
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           (EC 2.1.1.61)
          Length = 417

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +3

Query: 84  LYLITLSYFRFIALHTRQHT-HTYTDNSELTYMYRSLAVPLAI----LSDTPKKLDAQVS 248
           LY  T+    F +L  R+ T + + +   LT  +RSL VP+ I    L+ +   LD  + 
Sbjct: 320 LYSDTMRIENFSSLGPREDTINAFQNTGALTLQFRSLQVPVQIKSCKLNRSADNLDITIH 379

Query: 249 AMESTVSAISPG 284
            + S   AI+PG
Sbjct: 380 -LASKQRAITPG 390

>IDI2_LISMF (Q71ZT7) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP|
           isomerase) (Isopentenyl pyrophosphate isomerase)
          Length = 358

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/74 (22%), Positives = 35/74 (47%)
 Frame = +3

Query: 114 FIALHTRQHTHTYTDNSELTYMYRSLAVPLAILSDTPKKLDAQVSAMESTVSAISPGLIV 293
           +I   T    HT   N+EL  + R +A+P+A+ S +    ++ +      V  I+P  ++
Sbjct: 66  YINAMTGGSRHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125

Query: 294 IESENHETAFSPAI 335
           + + + E A    +
Sbjct: 126 LANISPEVALQEGL 139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,785,374
Number of Sequences: 219361
Number of extensions: 770271
Number of successful extensions: 1875
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)