ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal41b22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
2dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
3dbj|AK120271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
4dbj|AK104858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
5dbj|AK068466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
6gb|AY374513.1| Oryza sativa (japonica cultivar-group) myosin hea... 101 2e-18
7gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genom... 86 1e-13
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 86 1e-13
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
10emb|AL954688.9| Zebrafish DNA sequence from clone CH211-212L1 in... 46 0.097
11emb|AL356428.11| Human DNA sequence from clone RP11-343F16 on ch... 44 0.38
12emb|AL354798.13| Human DNA sequence from clone RP11-756A22 on ch... 44 0.38
13emb|AL671995.4| Mouse DNA sequence from clone RP23-109E24 on chr... 44 0.38
14gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, comp... 42 1.5
15gb|AC122034.3| Mus musculus BAC clone RP24-403M18 from chromosom... 42 1.5
16gb|AC100263.9| Mus musculus chromosome 19, clone RP23-66K19, com... 42 1.5
17gb|AC103645.6| Mus musculus chromosome 19, clone RP24-510J20, co... 42 1.5
18emb|AL360295.7| Human DNA sequence from clone RP11-378I13 on chr... 42 1.5
19emb|AL663107.13| Mouse DNA sequence from clone RP23-465K20 on ch... 42 1.5
20gb|AC158135.5| Mus musculus chromosome 3, clone RP24-393I15, com... 42 1.5
21gb|AC130842.5| Mus musculus BAC clone RP24-448N19 from chromosom... 42 1.5
22emb|BX004838.8| Zebrafish DNA sequence from clone DKEY-29N1 in l... 42 1.5
23ref|NM_120017.1| Arabidopsis thaliana unknown protein AT4G38560 ... 40 6.0
24ref|XM_641181.1| Dictyostelium discoideum hypothetical protein (... 40 6.0
25gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.0
26gb|AC156561.3| Mus musculus BAC clone RP24-264F22 from chromosom... 40 6.0
27gb|AC165075.3| Mus musculus BAC clone RP24-465N15 from chromosom... 40 6.0
28gb|AC115301.7| Mus musculus BAC clone RP24-83E2 from chromosome ... 40 6.0
29ref|NM_004588.3| Homo sapiens sodium channel, voltage-gated, typ... 40 6.0
30gb|AC183271.3| Pan troglodytes BAC clone CH251-356H14 from chrom... 40 6.0
31gb|AC131099.4| Mus musculus BAC clone RP23-15N12 from chromosome... 40 6.0
32gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome... 40 6.0
33gb|AC079276.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.0
34gb|AC115954.11| Mus musculus chromosome 16, clone RP24-62P21, co... 40 6.0
35gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, comp... 40 6.0
36gb|AC073107.7| Homo sapiens BAC clone RP11-479O9 from 7, complet... 40 6.0
37gb|AC100209.13| Mus musculus chromosome 13, clone RP23-59L9, com... 40 6.0
38gb|AC116484.12| Mus musculus chromosome 16, clone RP23-425F12, c... 40 6.0
39emb|AL445495.5| Human DNA sequence from clone RP11-349P17 on chr... 40 6.0
40emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on ch... 40 6.0
41gb|AC091503.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 6.0
42emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, ... 40 6.0
43emb|AL731817.11| Mouse DNA sequence from clone RP23-3J16 on chro... 40 6.0
44gb|AC108751.10| Homo sapiens 3 BAC RP11-278L15 (Roswell Park Can... 40 6.0
45emb|CR860366.1| Pongo pygmaeus mRNA; cDNA DKFZp459O0412 (from cl... 40 6.0
46gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome ... 40 6.0
47dbj|AB089137.1| Gorilla gorilla gene for CMP-N-acetylneuraminic ... 40 6.0
48gb|AC122707.2| Homo sapiens chromosome 5 clone RP11-158J3, compl... 40 6.0
49emb|CR625871.1| full-length cDNA clone CS0DC001YL16 of Neuroblas... 40 6.0
50dbj|AK094643.1| Homo sapiens cDNA FLJ37324 fis, clone BRAMY2018279 40 6.0
51dbj|AK090729.1| Homo sapiens cDNA FLJ33410 fis, clone BRACE2012653 40 6.0
52gb|AC022163.5| Homo sapiens chromosome 5 clone RP11-454F19, comp... 40 6.0
53gb|AC020939.7| Homo sapiens chromosome 5 clone CTD-2311D2, compl... 40 6.0
54gb|AC154748.2| Mus musculus BAC clone RP23-116P6 from chromosome... 40 6.0
55gb|AC008965.6| Homo sapiens chromosome 5 clone CTD-2364L17, comp... 40 6.0
56gb|AC026440.4|AC026440 Homo sapiens chromosome 5 clone CTD-2269F... 40 6.0
57gb|BT023434.1| Arabidopsis thaliana At4g38560 gene, complete cds 40 6.0
58dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
59gb|AC154320.2| Mus musculus BAC clone RP23-308E16 from chromosom... 40 6.0
60gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana... 40 6.0
61gb|BC059256.1| Mus musculus Notch gene homolog 2 (Drosophila), m... 40 6.0
62emb|AL844482.6| Mouse DNA sequence from clone RP23-81A18 on chro... 40 6.0
63dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
64dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
65dbj|AP002800.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.0
66emb|Z83744.1|CEC06A12 Caenorhabditis elegans Cosmid C06A12, comp... 40 6.0
67emb|AL832780.1|HSM804091 Homo sapiens mRNA; cDNA DKFZp686J037 (f... 40 6.0
68emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, B... 40 6.0
69gb|AC134455.3| Mus musculus BAC clone RP23-294B15 from 14, compl... 40 6.0
70emb|AL954334.4| Mouse DNA sequence from clone RP24-93B5 on chrom... 40 6.0
71emb|AL606987.11| Mouse DNA sequence from clone RP23-383I4 on chr... 40 6.0
72emb|AL606910.14| Mouse DNA sequence from clone RP23-282C23 on ch... 40 6.0 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  109 bits (55), Expect = 8e-21
 Identities = 150/180 (83%), Gaps = 10/180 (5%)
 Strand = Plus / Plus

                                                                            
Query: 18       gatttctttgctgtacacatattagagtcctgctgttgcat---ctctattcgctctcgg 74
                |||||| ||||||||||||||||| ||  ||| ||||||||   ||||||||||||  ||
Sbjct: 22435275 gatttccttgctgtacacatattacagagctggtgttgcattatctctattcgctcatgg 22435334

                                                                            
Query: 75       gcggataatctgtatttaattaccctttcatatttccggttcatcgctctacatacacga 134
                 |||||||||||||||||||||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 22435335 -cggataatctgtatttaattacccttccatatctcaggttcatctctctacatacaaga 22435393

                                                                            
Query: 135      caacatacacatacatacactgacaactcagaactaacatacatgtacagatctcttgct 194
                   ||      ||||||||||||||||  |||||||| |||||||||||||  |||||||
Sbjct: 22435394 tggca------tacatacactgacaacaaagaactaatatacatgtacagacttcttgct 22435447



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 406      ttcacttggagctcttnttnccccaccatcttttccg 442
                ||||||| |||||||| || |||||||||||||||||
Sbjct: 22435691 ttcactttgagctcttcttcccccaccatcttttccg 22435727
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>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0406F06
          Length = 144533

 Score =  109 bits (55), Expect = 8e-21
 Identities = 150/180 (83%), Gaps = 10/180 (5%)
 Strand = Plus / Plus

                                                                         
Query: 18    gatttctttgctgtacacatattagagtcctgctgttgcat---ctctattcgctctcgg 74
             |||||| ||||||||||||||||| ||  ||| ||||||||   ||||||||||||  ||
Sbjct: 96342 gatttccttgctgtacacatattacagagctggtgttgcattatctctattcgctcatgg 96401

                                                                         
Query: 75    gcggataatctgtatttaattaccctttcatatttccggttcatcgctctacatacacga 134
              |||||||||||||||||||||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 96402 -cggataatctgtatttaattacccttccatatctcaggttcatctctctacatacaaga 96460

                                                                         
Query: 135   caacatacacatacatacactgacaactcagaactaacatacatgtacagatctcttgct 194
                ||      ||||||||||||||||  |||||||| |||||||||||||  |||||||
Sbjct: 96461 tggca------tacatacactgacaacaaagaactaatatacatgtacagacttcttgct 96514



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 406   ttcacttggagctcttnttnccccaccatcttttccg 442
             ||||||| |||||||| || |||||||||||||||||
Sbjct: 96758 ttcactttgagctcttcttcccccaccatcttttccg 96794
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>dbj|AK120271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047M22, full
            insert sequence
          Length = 3296

 Score =  109 bits (55), Expect = 8e-21
 Identities = 150/180 (83%), Gaps = 10/180 (5%)
 Strand = Plus / Minus

                                                                        
Query: 18   gatttctttgctgtacacatattagagtcctgctgttgcat---ctctattcgctctcgg 74
            |||||| ||||||||||||||||| ||  ||| ||||||||   ||||||||||||  ||
Sbjct: 3275 gatttccttgctgtacacatattacagagctggtgttgcattatctctattcgctcatgg 3216

                                                                        
Query: 75   gcggataatctgtatttaattaccctttcatatttccggttcatcgctctacatacacga 134
             |||||||||||||||||||||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 3215 -cggataatctgtatttaattacccttccatatctcaggttcatctctctacatacaaga 3157

                                                                        
Query: 135  caacatacacatacatacactgacaactcagaactaacatacatgtacagatctcttgct 194
               ||      ||||||||||||||||  |||||||| |||||||||||||  |||||||
Sbjct: 3156 tggca------tacatacactgacaacaaagaactaatatacatgtacagacttcttgct 3103



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 406  ttcacttggagctcttnttnccccaccatcttttccg 442
            ||||||| |||||||| || |||||||||||||||||
Sbjct: 2859 ttcactttgagctcttcttcccccaccatcttttccg 2823
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>dbj|AK104858.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D03, full
            insert sequence
          Length = 1552

 Score =  109 bits (55), Expect = 8e-21
 Identities = 150/180 (83%), Gaps = 10/180 (5%)
 Strand = Plus / Minus

                                                                        
Query: 18   gatttctttgctgtacacatattagagtcctgctgttgcat---ctctattcgctctcgg 74
            |||||| ||||||||||||||||| ||  ||| ||||||||   ||||||||||||  ||
Sbjct: 1526 gatttccttgctgtacacatattacagagctggtgttgcattatctctattcgctcatgg 1467

                                                                        
Query: 75   gcggataatctgtatttaattaccctttcatatttccggttcatcgctctacatacacga 134
             |||||||||||||||||||||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 1466 -cggataatctgtatttaattacccttccatatctcaggttcatctctctacatacaaga 1408

                                                                        
Query: 135  caacatacacatacatacactgacaactcagaactaacatacatgtacagatctcttgct 194
               ||      ||||||||||||||||  |||||||| |||||||||||||  |||||||
Sbjct: 1407 tggca------tacatacactgacaacaaagaactaatatacatgtacagacttcttgct 1354



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 406  ttcacttggagctcttnttnccccaccatcttttccg 442
            ||||||| |||||||| || |||||||||||||||||
Sbjct: 1110 ttcactttgagctcttcttcccccaccatcttttccg 1074
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>dbj|AK068466.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155K02, full
            insert sequence
          Length = 4236

 Score =  109 bits (55), Expect = 8e-21
 Identities = 150/180 (83%), Gaps = 10/180 (5%)
 Strand = Plus / Minus

                                                                        
Query: 18   gatttctttgctgtacacatattagagtcctgctgttgcat---ctctattcgctctcgg 74
            |||||| ||||||||||||||||| ||  ||| ||||||||   ||||||||||||  ||
Sbjct: 4208 gatttccttgctgtacacatattacagagctggtgttgcattatctctattcgctcatgg 4149

                                                                        
Query: 75   gcggataatctgtatttaattaccctttcatatttccggttcatcgctctacatacacga 134
             |||||||||||||||||||||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 4148 -cggataatctgtatttaattacccttccatatctcaggttcatctctctacatacaaga 4090

                                                                        
Query: 135  caacatacacatacatacactgacaactcagaactaacatacatgtacagatctcttgct 194
               ||      ||||||||||||||||  |||||||| |||||||||||||  |||||||
Sbjct: 4089 tggca------tacatacactgacaacaaagaactaatatacatgtacagacttcttgct 4036



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 406  ttcacttggagctcttnttnccccaccatcttttccg 442
            ||||||| |||||||| || |||||||||||||||||
Sbjct: 3792 ttcactttgagctcttcttcccccaccatcttttccg 3756
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>gb|AY374513.1| Oryza sativa (japonica cultivar-group) myosin heavy chain class VIII
            A1 protein (MyoVIIIA1) mRNA, complete cds
          Length = 4864

 Score =  101 bits (51), Expect = 2e-18
 Identities = 149/180 (82%), Gaps = 10/180 (5%)
 Strand = Plus / Minus

                                                                        
Query: 18   gatttctttgctgtacacatattagagtcctgctgttgcat---ctctattcgctctcgg 74
            |||||| ||||||||||||||||| ||  ||| ||||||||   ||||||||||||  ||
Sbjct: 4811 gatttccttgctgtacacatattacagagctggtgttgcattatctctattcgctcatgg 4752

                                                                        
Query: 75   gcggataatctgtatttaattaccctttcatatttccggttcatcgctctacatacacga 134
             |||||||||||||||||||||||||| |||||  | |||||||| ||||||||||| ||
Sbjct: 4751 -cggataatctgtatttaattacccttccatatcccaggttcatctctctacatacaaga 4693

                                                                        
Query: 135  caacatacacatacatacactgacaactcagaactaacatacatgtacagatctcttgct 194
               ||      ||||||||||||||||  |||||||| |||||||||||||  |||||||
Sbjct: 4692 tggca------tacatacactgacaacaaagaactaatatacatgtacagacttcttgct 4639



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 406  ttcacttggagctcttnttnccccaccatcttttccg 442
            ||||||| |||||||| || |||||||||||||||||
Sbjct: 4395 ttcactttgagctcttcttcccccaccatcttttccg 4359
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>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete
             sequence
          Length = 167239

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 68/75 (90%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                         
Query: 57    atctctattcgctctcgggcggataatctgtatttaattaccctttcatatttccggttc 116
             ||||||||||||||  || |||||||||||||||||||||||||| ||||| || |||||
Sbjct: 78280 atctctattcgctcatgg-cggataatctgtatttaattacccttccatatctcaggttc 78338

                            
Query: 117   atcgctctacataca 131
             ||| |||||||||||
Sbjct: 78339 atctctctacataca 78353



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 406   ttcacttggagctcttnttnccccaccatcttttccg 442
             ||||||| |||||||| || |||| ||||||||||||
Sbjct: 78640 ttcactttgagctcttcttcccccgccatcttttccg 78676
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 68/75 (90%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                            
Query: 57       atctctattcgctctcgggcggataatctgtatttaattaccctttcatatttccggttc 116
                ||||||||||||||  || |||||||||||||||||||||||||| ||||| || |||||
Sbjct: 21006998 atctctattcgctcatgg-cggataatctgtatttaattacccttccatatctcaggttc 21006940

                               
Query: 117      atcgctctacataca 131
                ||| |||||||||||
Sbjct: 21006939 atctctctacataca 21006925



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 406      ttcacttggagctcttnttnccccaccatcttttccg 442
                ||||||| |||||||| || |||| ||||||||||||
Sbjct: 21006638 ttcactttgagctcttcttcccccgccatcttttccg 21006602
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 68/75 (90%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                            
Query: 57       atctctattcgctctcgggcggataatctgtatttaattaccctttcatatttccggttc 116
                ||||||||||||||  || |||||||||||||||||||||||||| ||||| || |||||
Sbjct: 21000027 atctctattcgctcatgg-cggataatctgtatttaattacccttccatatctcaggttc 20999969

                               
Query: 117      atcgctctacataca 131
                ||| |||||||||||
Sbjct: 20999968 atctctctacataca 20999954



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 406      ttcacttggagctcttnttnccccaccatcttttccg 442
                ||||||| |||||||| || |||| ||||||||||||
Sbjct: 20999667 ttcactttgagctcttcttcccccgccatcttttccg 20999631
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>emb|AL954688.9| Zebrafish DNA sequence from clone CH211-212L1 in linkage group 4,
             complete sequence
          Length = 210027

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 137   acatacacatacatacactgaca 159
             |||||||||||||||||||||||
Sbjct: 60195 acatacacatacatacactgaca 60173
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>emb|AL356428.11| Human DNA sequence from clone RP11-343F16 on chromosome 1, complete
              sequence
          Length = 174739

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 136    aacatacacatacatacactga 157
              ||||||||||||||||||||||
Sbjct: 123963 aacatacacatacatacactga 123942
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>emb|AL354798.13| Human DNA sequence from clone RP11-756A22 on chromosome 13 Contains the
             3' end of a novel gene, the CENJP gene for centromere
             protein J (LAP, CPAP, LIP1, BM032), 2 novel genes, a
             pseudogene similar to part of solute carrier family 25
             (mitochondrial carrier; ornithine transporter) member 15
             (SLC25A15), a TPTE and PTEN homologous inositol lipid
             phosphatase (TPIP) pseudogene, a 60S ribisomal protein L34
             (RPL34) pseudogene and 2 CpG islands, complete sequence
          Length = 167319

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 139   atacacatacatacactgacaa 160
             ||||||||||||||||||||||
Sbjct: 70783 atacacatacatacactgacaa 70804
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>emb|AL671995.4| Mouse DNA sequence from clone RP23-109E24 on chromosome X, complete
             sequence
          Length = 155349

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 82    atctgtatttaattaccctttc 103
             ||||||||||||||||||||||
Sbjct: 12773 atctgtatttaattaccctttc 12752
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>gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, complete sequence
          Length = 215326

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 134    acaacatacacatacatacac 154
              |||||||||||||||||||||
Sbjct: 129489 acaacatacacatacatacac 129469
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>gb|AC122034.3| Mus musculus BAC clone RP24-403M18 from chromosome 15, complete sequence
          Length = 182891

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 319    ccttctctcctgccatctgtt 339
              |||||||||||||||||||||
Sbjct: 151601 ccttctctcctgccatctgtt 151581
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>gb|AC100263.9| Mus musculus chromosome 19, clone RP23-66K19, complete sequence
          Length = 188435

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 137    acatacacatacatacactga 157
              |||||||||||||||||||||
Sbjct: 166612 acatacacatacatacactga 166592
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>gb|AC103645.6| Mus musculus chromosome 19, clone RP24-510J20, complete sequence
          Length = 209224

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 137    acatacacatacatacactga 157
              |||||||||||||||||||||
Sbjct: 192565 acatacacatacatacactga 192585
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>emb|AL360295.7| Human DNA sequence from clone RP11-378I13 on chromosome 1 Contains the
             5' end of a novel gene and a novel gene, complete sequence
          Length = 51173

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 125   acatacacgacaacatacaca 145
             |||||||||||||||||||||
Sbjct: 21484 acatacacgacaacatacaca 21464
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>emb|AL663107.13| Mouse DNA sequence from clone RP23-465K20 on chromosome 11 Contains a
              novel gene (2210415F13Rik), an NADH dehydrogenase
              (ubiquinone) Fe-S protein 3 (Ndufs3) pseudogene, a novel
              pseudogene, a novel gene (1810065E05Rik), a novel gene
              similar to rat solute carrier family 11 member 1 (Slc11a1),
              a novel gene, the  Olfr30 gene for olfactory receptor 30,
              an olfactory receptor (MOR284-1P) pseudogene, the gene for
              olfactory receptor MOR284-2 (LOC216774),  a novel gene
              similar to MOR275 (LOC193140), a ribosomal protein L24
              (Rpl24) pseudogene, the gene for olfactory receptor
              MOR275-1, a DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5)
              pseudogene, an olfactory receptor (MOR275-3) pseudogene and
              a CpG island, complete sequence
          Length = 191700

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 398    cttccatgttcacttggagct 418
              |||||||||||||||||||||
Sbjct: 102316 cttccatgttcacttggagct 102336
to top
>gb|AC158135.5| Mus musculus chromosome 3, clone RP24-393I15, complete sequence
          Length = 191562

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   acaacatacacatacatacac 154
             |||||||||||||||||||||
Sbjct: 72407 acaacatacacatacatacac 72427
to top
>gb|AC130842.5| Mus musculus BAC clone RP24-448N19 from chromosome 3, complete sequence
          Length = 184249

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 134    acaacatacacatacatacac 154
              |||||||||||||||||||||
Sbjct: 152266 acaacatacacatacatacac 152246
to top
>emb|BX004838.8| Zebrafish DNA sequence from clone DKEY-29N1 in linkage group 7,
             complete sequence
          Length = 226160

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   acaacatacacatacatacac 154
             |||||||||||||||||||||
Sbjct: 51148 acaacatacacatacatacac 51168
to top
>ref|NM_120017.1| Arabidopsis thaliana unknown protein AT4G38560 mRNA, complete cds
          Length = 1566

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 383  gctctgaccttgtagcttcc 402
            ||||||||||||||||||||
Sbjct: 1037 gctctgaccttgtagcttcc 1018
to top
>ref|XM_641181.1| Dictyostelium discoideum hypothetical protein (DDB0190549), partial
            mRNA
          Length = 3099

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  tctcttcatttgatgcaatt 361
            ||||||||||||||||||||
Sbjct: 2959 tctcttcatttgatgcaatt 2940
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 257     gtccaccgtctccgccatct 276
               ||||||||||||||||||||
Sbjct: 3739002 gtccaccgtctccgccatct 3738983
to top
>gb|AC156561.3| Mus musculus BAC clone RP24-264F22 from chromosome 14, complete
             sequence
          Length = 170677

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   acacatacatacactgacaa 160
             ||||||||||||||||||||
Sbjct: 49919 acacatacatacactgacaa 49938
to top
>gb|AC165075.3| Mus musculus BAC clone RP24-465N15 from chromosome 17, complete
             sequence
          Length = 180635

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   acacatacatacactgacaa 160
             ||||||||||||||||||||
Sbjct: 54791 acacatacatacactgacaa 54810
to top
>gb|AC115301.7| Mus musculus BAC clone RP24-83E2 from chromosome 7, complete sequence
          Length = 175603

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 136   aacatacacatacatacactgaca 159
             |||| |||||||||||||||||||
Sbjct: 98429 aacacacacatacatacactgaca 98406
to top
>ref|NM_004588.3| Homo sapiens sodium channel, voltage-gated, type II, beta (SCN2B),
            mRNA
          Length = 4939

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  tctcttgctgtgcctcttgc 205
            ||||||||||||||||||||
Sbjct: 4480 tctcttgctgtgcctcttgc 4499
to top
>gb|AC183271.3| Pan troglodytes BAC clone CH251-356H14 from chromosome 7, complete
              sequence
          Length = 183934

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    caacatacacatacatacac 154
              ||||||||||||||||||||
Sbjct: 120079 caacatacacatacatacac 120098
to top
>gb|AC131099.4| Mus musculus BAC clone RP23-15N12 from chromosome 13, complete sequence
          Length = 208298

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    atattagagtcctgctgttg 55
             ||||||||||||||||||||
Sbjct: 45441 atattagagtcctgctgttg 45422
to top
>gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome 7, complete sequence
          Length = 230675

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 136   aacatacacatacatacactgaca 159
             |||| |||||||||||||||||||
Sbjct: 12025 aacacacacatacatacactgaca 12002
to top
>gb|AC079276.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-446B13, complete
              sequence
          Length = 205177

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    acatacacatacatacactg 156
              ||||||||||||||||||||
Sbjct: 119741 acatacacatacatacactg 119760
to top
>gb|AC115954.11| Mus musculus chromosome 16, clone RP24-62P21, complete sequence
          Length = 205819

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 136  aacatacacatacatacactgaca 159
            ||||||||||||||||||| ||||
Sbjct: 1042 aacatacacatacatacacagaca 1065
to top
>gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, complete sequence
          Length = 225600

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    tgaggaaatgctctgacctt 393
              ||||||||||||||||||||
Sbjct: 194208 tgaggaaatgctctgacctt 194227
to top
>gb|AC073107.7| Homo sapiens BAC clone RP11-479O9 from 7, complete sequence
          Length = 194178

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    caacatacacatacatacac 154
              ||||||||||||||||||||
Sbjct: 185907 caacatacacatacatacac 185888
to top
>gb|AC100209.13| Mus musculus chromosome 13, clone RP23-59L9, complete sequence
          Length = 215769

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    aacatacacatacatacact 155
              ||||||||||||||||||||
Sbjct: 203097 aacatacacatacatacact 203078
to top
>gb|AC116484.12| Mus musculus chromosome 16, clone RP23-425F12, complete sequence
          Length = 206793

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 136    aacatacacatacatacactgaca 159
              ||||||||||||||||||| ||||
Sbjct: 144018 aacatacacatacatacacagaca 144041
to top
>emb|AL445495.5| Human DNA sequence from clone RP11-349P17 on chromosome 9 Contains part
              of the GPR51 gene for G protein-coupled receptor 51 (HG20,
              GABBR2, GPRC3B, GABABR2) and a CpG island, complete
              sequence
          Length = 155837

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    aacatacacatacatacact 155
              ||||||||||||||||||||
Sbjct: 108499 aacatacacatacatacact 108480
to top
>emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on chromosome 13q22.1-22.3
             Contains a novel gene, complete sequence
          Length = 111350

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   aacatacacatacatacact 155
             ||||||||||||||||||||
Sbjct: 48781 aacatacacatacatacact 48762
to top
>gb|AC091503.2| Rattus norvegicus strain Brown Norway clone RP31-446A15, complete
             sequence
          Length = 178963

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   caacatacacatacatacac 154
             ||||||||||||||||||||
Sbjct: 63452 caacatacacatacatacac 63433
to top
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
          Length = 199789

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 383    gctctgaccttgtagcttcc 402
              ||||||||||||||||||||
Sbjct: 139604 gctctgaccttgtagcttcc 139585
to top
>emb|AL731817.11| Mouse DNA sequence from clone RP23-3J16 on chromosome 11 Contains a
             novel gene and the 3' end of a novel gene, complete
             sequence
          Length = 103582

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   acaacatacacatacataca 153
             ||||||||||||||||||||
Sbjct: 57366 acaacatacacatacataca 57385
to top
>gb|AC108751.10| Homo sapiens 3 BAC RP11-278L15 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 131894

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  aacatacacatacatacact 155
            ||||||||||||||||||||
Sbjct: 2570 aacatacacatacatacact 2551
to top
>emb|CR860366.1| Pongo pygmaeus mRNA; cDNA DKFZp459O0412 (from clone DKFZp459O0412)
          Length = 1757

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  tctcttgctgtgcctcttgc 205
            ||||||||||||||||||||
Sbjct: 1314 tctcttgctgtgcctcttgc 1333
to top
>gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome 14, complete sequence
          Length = 227675

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   acatacacatacatacactgacaa 160
             ||||||||||||||||||| ||||
Sbjct: 77952 acatacacatacatacacttacaa 77975
to top
>dbj|AB089137.1| Gorilla gorilla gene for CMP-N-acetylneuraminic acid hydroxylase,
            partial cds, Alu repeat region
          Length = 8299

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  tttctgacactcccaaaaaa 230
            ||||||||||||||||||||
Sbjct: 6821 tttctgacactcccaaaaaa 6840
to top
>gb|AC122707.2| Homo sapiens chromosome 5 clone RP11-158J3, complete sequence
          Length = 180483

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    aacatacacatacatacact 155
              ||||||||||||||||||||
Sbjct: 161702 aacatacacatacatacact 161683
to top
>emb|CR625871.1| full-length cDNA clone CS0DC001YL16 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 918

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 tctcttgctgtgcctcttgc 205
           ||||||||||||||||||||
Sbjct: 504 tctcttgctgtgcctcttgc 523
to top
>dbj|AK094643.1| Homo sapiens cDNA FLJ37324 fis, clone BRAMY2018279
          Length = 2844

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  tctcttgctgtgcctcttgc 205
            ||||||||||||||||||||
Sbjct: 2403 tctcttgctgtgcctcttgc 2422
to top
>dbj|AK090729.1| Homo sapiens cDNA FLJ33410 fis, clone BRACE2012653
          Length = 2007

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  tctcttgctgtgcctcttgc 205
            ||||||||||||||||||||
Sbjct: 1572 tctcttgctgtgcctcttgc 1591
to top
>gb|AC022163.5| Homo sapiens chromosome 5 clone RP11-454F19, complete sequence
          Length = 165675

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   aacatacacatacatacact 155
             ||||||||||||||||||||
Sbjct: 36188 aacatacacatacatacact 36169
to top
>gb|AC020939.7| Homo sapiens chromosome 5 clone CTD-2311D2, complete sequence
          Length = 112595

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    aacatacacatacatacact 155
              ||||||||||||||||||||
Sbjct: 111226 aacatacacatacatacact 111245
to top
>gb|AC154748.2| Mus musculus BAC clone RP23-116P6 from chromosome 13, complete sequence
          Length = 203908

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   aacatacacatacatacact 155
             ||||||||||||||||||||
Sbjct: 20065 aacatacacatacatacact 20046
to top
>gb|AC008965.6| Homo sapiens chromosome 5 clone CTD-2364L17, complete sequence
          Length = 139939

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   aacatacacatacatacact 155
             ||||||||||||||||||||
Sbjct: 33763 aacatacacatacatacact 33782
to top
>gb|AC026440.4|AC026440 Homo sapiens chromosome 5 clone CTD-2269F5, complete sequence
          Length = 103115

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   acaacatacacatacataca 153
             ||||||||||||||||||||
Sbjct: 22775 acaacatacacatacataca 22756
to top
>gb|BT023434.1| Arabidopsis thaliana At4g38560 gene, complete cds
          Length = 1650

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 383  gctctgaccttgtagcttcc 402
            ||||||||||||||||||||
Sbjct: 1057 gctctgaccttgtagcttcc 1038
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 164      agaactaacatacatgtaca 183
                ||||||||||||||||||||
Sbjct: 22750873 agaactaacatacatgtaca 22750892
to top
>gb|AC154320.2| Mus musculus BAC clone RP23-308E16 from chromosome 13, complete
             sequence
          Length = 202134

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   acaacatacacatacataca 153
             ||||||||||||||||||||
Sbjct: 67745 acaacatacacatacataca 67764
to top
>gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana Clone T5G13 From Chromosome
             IV, complete sequence
          Length = 107740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   gctctgaccttgtagcttcc 402
             ||||||||||||||||||||
Sbjct: 25923 gctctgaccttgtagcttcc 25942
to top
>gb|BC059256.1| Mus musculus Notch gene homolog 2 (Drosophila), mRNA (cDNA clone
           IMAGE:6406444), complete cds
          Length = 4616

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 acatacacatacatacactg 156
           ||||||||||||||||||||
Sbjct: 78  acatacacatacatacactg 59
to top
>emb|AL844482.6| Mouse DNA sequence from clone RP23-81A18 on chromosome X, complete
              sequence
          Length = 141997

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    acacatacatacactgacaa 160
              ||||||||||||||||||||
Sbjct: 113751 acacatacatacactgacaa 113770
to top
>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1116H04
          Length = 140142

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   agaactaacatacatgtaca 183
             ||||||||||||||||||||
Sbjct: 77515 agaactaacatacatgtaca 77534
to top
>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1111C03
          Length = 144879

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    agaactaacatacatgtaca 183
              ||||||||||||||||||||
Sbjct: 119667 agaactaacatacatgtaca 119686
to top
>dbj|AP002800.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-832A4, complete
             sequence
          Length = 215441

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   tctcttgctgtgcctcttgc 205
             ||||||||||||||||||||
Sbjct: 85845 tctcttgctgtgcctcttgc 85826
to top
>emb|Z83744.1|CEC06A12 Caenorhabditis elegans Cosmid C06A12, complete sequence
          Length = 39774

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   tcccaaaaaactggacgcgc 240
             ||||||||||||||||||||
Sbjct: 18216 tcccaaaaaactggacgcgc 18235
to top
>emb|AL832780.1|HSM804091 Homo sapiens mRNA; cDNA DKFZp686J037 (from clone DKFZp686J037)
          Length = 7208

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  aacatacacatacatacact 155
            ||||||||||||||||||||
Sbjct: 1461 aacatacacatacatacact 1480
to top
>emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20M13 (ESSA project)
          Length = 91938

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   gctctgaccttgtagcttcc 402
             ||||||||||||||||||||
Sbjct: 40545 gctctgaccttgtagcttcc 40526
to top
>gb|AC134455.3| Mus musculus BAC clone RP23-294B15 from 14, complete sequence
          Length = 186427

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    acacatacatacactgacaa 160
              ||||||||||||||||||||
Sbjct: 130145 acacatacatacactgacaa 130164
to top
>emb|AL954334.4| Mouse DNA sequence from clone RP24-93B5 on chromosome 4, complete
             sequence
          Length = 125201

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   acacatacatacactgacaa 160
             ||||||||||||||||||||
Sbjct: 60940 acacatacatacactgacaa 60921
to top
>emb|AL606987.11| Mouse DNA sequence from clone RP23-383I4 on chromosome 4, complete
              sequence
          Length = 212647

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    acacatacatacactgacaa 160
              ||||||||||||||||||||
Sbjct: 160694 acacatacatacactgacaa 160713
to top
>emb|AL606910.14| Mouse DNA sequence from clone RP23-282C23 on chromosome 4, complete
             sequence
          Length = 185210

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   acacatacatacactgacaa 160
             ||||||||||||||||||||
Sbjct: 90724 acacatacatacactgacaa 90743


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,198,461
Number of Sequences: 3902068
Number of extensions: 4198461
Number of successful extensions: 130695
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130368
Number of HSP's gapped (non-prelim): 312
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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