ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal40m22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RL36B_ARATH (Q9M352) 60S ribosomal protein L36-2 168 1e-41
2RL36C_ARATH (Q9LZ57) 60S ribosomal protein L36-3 167 2e-41
3RL36A_ARATH (O80929) 60S ribosomal protein L36-1 166 4e-41
4RL36_DAUCA (P52866) 60S ribosomal protein L36 140 3e-33
5RL36_ENTCP (Q9LRB8) 60S ribosomal protein L36 130 3e-30
6RL36A_SCHPO (Q92365) 60S ribosomal protein L36-A 120 3e-27
7RL36_PONPY (Q5RAZ9) 60S ribosomal protein L36 117 2e-26
8RL36_HUMAN (Q9Y3U8) 60S ribosomal protein L36 117 2e-26
9RL36B_SCHPO (O94658) 60S ribosomal protein L36-B 117 2e-26
10RL36_BOVIN (Q3T171) 60S ribosomal protein L36 117 4e-26
11RL36_RAT (P39032) 60S ribosomal protein L36 115 1e-25
12RL36_MOUSE (P47964) 60S ribosomal protein L36 109 8e-24
13RL36_CAEEL (P49181) 60S ribosomal protein L36 107 2e-23
14RL36_TRIHM (Q9HFR7) 60S ribosomal protein L36 (TRP36) 105 1e-22
15RL36_CANAL (P47834) 60S ribosomal protein L36 (L39) 103 3e-22
16RL36_DROME (P49630) 60S ribosomal protein L36 (Protein minute(1)1B) 102 7e-22
17RL36B_YEAST (O14455) 60S ribosomal protein L36-B (L39B) (YL39) 94 4e-19
18RL36A_YEAST (P05745) 60S ribosomal protein L36-A (L39A) (YL39) 93 6e-19
19ORN_PSESM (Q87VI6) Oligoribonuclease (EC 3.1.-.-) 32 1.2
20RS6_ICTPU (Q90YR8) 40S ribosomal protein S6 31 2.7
21MRGX2_BUNHO (Q4QXU6) Mas-related G-protein coupled receptor memb... 31 3.6
22ORN_PASMU (P57885) Oligoribonuclease (EC 3.1.-.-) 31 3.6
23MRGX2_PANTR (Q4QXX9) Mas-related G-protein coupled receptor memb... 30 4.7
24MRGX2_GORGO (Q4QXU0) Mas-related G-protein coupled receptor memb... 30 4.7
25ORN_MANSM (Q65SE1) Oligoribonuclease (EC 3.1.-.-) 30 4.7
26SRP54_AQUAE (O67615) Signal recognition particle protein (Fifty-... 30 4.7
27LMD1_HUMAN (P29536) Leiomodin-1 (Leiomodin, muscle form) (64 kDa... 30 6.1
28IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2 30 6.1
29IF2_BRUAB (Q57AA0) Translation initiation factor IF-2 30 6.1
30IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2 30 6.1

>RL36B_ARATH (Q9M352) 60S ribosomal protein L36-2|
          Length = 112

 Score =  168 bits (425), Expect = 1e-41
 Identities = 85/106 (80%), Positives = 93/106 (87%)
 Frame = -2

Query: 635 MAPSQPKSGLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRI 456
           M   Q K+GLFVG+NKGHVVT+REL PRP  RKGK +KR  F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 455 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSAGTG 318
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMRS G G
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGG 106



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>RL36C_ARATH (Q9LZ57) 60S ribosomal protein L36-3|
          Length = 108

 Score =  167 bits (424), Expect = 2e-41
 Identities = 83/99 (83%), Positives = 92/99 (92%)
 Frame = -2

Query: 614 SGLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVG 435
           +GLFVG+NKGHVVTKRE PPRP++RKGK +KR  F+R+LI+EVAG APYEKRITELLKVG
Sbjct: 4   TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63

Query: 434 KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSAGTG 318
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMRS G G
Sbjct: 64  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAG 102



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>RL36A_ARATH (O80929) 60S ribosomal protein L36-1|
          Length = 113

 Score =  166 bits (421), Expect = 4e-41
 Identities = 83/98 (84%), Positives = 90/98 (91%)
 Frame = -2

Query: 617 KSGLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKV 438
           K+GLFVG+NKGHVVT+REL PRP+ RKGK +KR  F+R LIREVAG APYEKRITELLKV
Sbjct: 7   KTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKV 66

Query: 437 GKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSAG 324
           GKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMRS G
Sbjct: 67  GKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLG 104



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>RL36_DAUCA (P52866) 60S ribosomal protein L36|
          Length = 106

 Score =  140 bits (353), Expect = 3e-33
 Identities = 68/91 (74%), Positives = 78/91 (85%)
 Frame = -2

Query: 635 MAPSQPKSGLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRI 456
           MAP QP +GLFVG+NKGH+VTK+EL PRPSDRKGK +KR HFVR+LIREVAGF PYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRI 60

Query: 455 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 363
           TELLKVGKDKRALKV + K+G H +  K+ E
Sbjct: 61  TELLKVGKDKRALKVRQEKVG-HSQESKEEE 90



 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -1

Query: 408 EAKVGHPQEGQEEERGDVQCPQEDEICWYW 319
           + KVGH QE +EEERGDVQC   DE  W+W
Sbjct: 77  QEKVGHSQESKEEERGDVQCSPPDE-GWWW 105



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>RL36_ENTCP (Q9LRB8) 60S ribosomal protein L36|
          Length = 101

 Score =  130 bits (328), Expect = 3e-30
 Identities = 65/95 (68%), Positives = 79/95 (83%)
 Frame = -2

Query: 602 VGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKR 423
           VG+NKGH VTK+   PRPS RKG  ++RV  VR+++REVAG+APYE+R+ ELLKVGKDKR
Sbjct: 6   VGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKR 65

Query: 422 ALKVAKRKLGTHKRAKKKREEMSSVLRKMRSAGTG 318
           ALK+ KRKLGTH R KKKREEM+ VLRKM++A  G
Sbjct: 66  ALKMCKRKLGTHMRGKKKREEMAGVLRKMQAASKG 100



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>RL36A_SCHPO (Q92365) 60S ribosomal protein L36-A|
          Length = 99

 Score =  120 bits (301), Expect = 3e-27
 Identities = 59/95 (62%), Positives = 78/95 (82%)
 Frame = -2

Query: 611 GLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGK 432
           GL VG+NKG V+TKR+LP RPS RKG+ +KR  FVRS++REVAGFAPYE+R+ EL++  +
Sbjct: 4   GLVVGLNKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQ 63

Query: 431 DKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSA 327
           DKRA K+AK++LGT KRAK K EE++SV++  R A
Sbjct: 64  DKRARKLAKKRLGTLKRAKGKIEELTSVIQSSRLA 98



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>RL36_PONPY (Q5RAZ9) 60S ribosomal protein L36|
          Length = 104

 Score =  117 bits (294), Expect = 2e-26
 Identities = 59/92 (64%), Positives = 70/92 (76%)
 Frame = -2

Query: 602 VGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKR 423
           VG+NKGH VTK    PR S R+G+ TK   FVR +IREV GFAPYE+R  ELLKV KDKR
Sbjct: 8   VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKR 67

Query: 422 ALKVAKRKLGTHKRAKKKREEMSSVLRKMRSA 327
           ALK  K+++GTH RAK+KREE+S+VL  MR A
Sbjct: 68  ALKFIKKRVGTHIRAKRKREELSNVLAAMRKA 99



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>RL36_HUMAN (Q9Y3U8) 60S ribosomal protein L36|
          Length = 104

 Score =  117 bits (294), Expect = 2e-26
 Identities = 59/92 (64%), Positives = 70/92 (76%)
 Frame = -2

Query: 602 VGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKR 423
           VG+NKGH VTK    PR S R+G+ TK   FVR +IREV GFAPYE+R  ELLKV KDKR
Sbjct: 8   VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKR 67

Query: 422 ALKVAKRKLGTHKRAKKKREEMSSVLRKMRSA 327
           ALK  K+++GTH RAK+KREE+S+VL  MR A
Sbjct: 68  ALKFIKKRVGTHIRAKRKREELSNVLAAMRKA 99



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>RL36B_SCHPO (O94658) 60S ribosomal protein L36-B|
          Length = 99

 Score =  117 bits (294), Expect = 2e-26
 Identities = 58/95 (61%), Positives = 76/95 (80%)
 Frame = -2

Query: 611 GLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGK 432
           GL VG+NKG  +TKR+LP RPS RKG  +KR  FVRS++REVAGFAPYE+R+ EL++  +
Sbjct: 4   GLVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQ 63

Query: 431 DKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSA 327
           DKRA K+AK++LGT KRAK K EE++SV++  R A
Sbjct: 64  DKRARKLAKKRLGTLKRAKGKIEELTSVIQSSRLA 98



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>RL36_BOVIN (Q3T171) 60S ribosomal protein L36|
          Length = 104

 Score =  117 bits (292), Expect = 4e-26
 Identities = 59/92 (64%), Positives = 70/92 (76%)
 Frame = -2

Query: 602 VGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKR 423
           VG+NKGH VTK    PR S R+G+ TK   FVR +IREV GFAPYE+R  ELLKV KDKR
Sbjct: 8   VGLNKGHKVTKNVGKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKR 67

Query: 422 ALKVAKRKLGTHKRAKKKREEMSSVLRKMRSA 327
           ALK  K+++GTH RAK+KREE+S+VL  MR A
Sbjct: 68  ALKFIKKRVGTHIRAKRKREELSNVLAAMRKA 99



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>RL36_RAT (P39032) 60S ribosomal protein L36|
          Length = 104

 Score =  115 bits (288), Expect = 1e-25
 Identities = 58/92 (63%), Positives = 69/92 (75%)
 Frame = -2

Query: 602 VGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKR 423
           VG+NKGH VTK    PR S R+G+ TK   FVR +IREV  FAPYE+R  ELLKV KDKR
Sbjct: 8   VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCAFAPYERRAMELLKVSKDKR 67

Query: 422 ALKVAKRKLGTHKRAKKKREEMSSVLRKMRSA 327
           ALK  K+++GTH RAK+KREE+S+VL  MR A
Sbjct: 68  ALKFIKKRVGTHIRAKRKREELSNVLAAMRKA 99



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>RL36_MOUSE (P47964) 60S ribosomal protein L36|
          Length = 104

 Score =  109 bits (272), Expect = 8e-24
 Identities = 55/92 (59%), Positives = 66/92 (71%)
 Frame = -2

Query: 602 VGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKR 423
           VG+NKGH VTK    PR S R+ + T    FVR +IREV GFAPYE+R  ELLKV K KR
Sbjct: 8   VGLNKGHKVTKNVSKPRHSRRRSRLTNHTKFVRDMIREVCGFAPYERRAMELLKVSKSKR 67

Query: 422 ALKVAKRKLGTHKRAKKKREEMSSVLRKMRSA 327
           ALK  K+++GTH RAK+KREE+S+VL  M  A
Sbjct: 68  ALKFIKKRVGTHIRAKRKREELSNVLAAMEEA 99



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>RL36_CAEEL (P49181) 60S ribosomal protein L36|
          Length = 103

 Score =  107 bits (268), Expect = 2e-23
 Identities = 49/95 (51%), Positives = 68/95 (71%)
 Frame = -2

Query: 611 GLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKVGK 432
           GL VG+NKGH  T+  +  R +  KG  +K+   VR L+RE+ GFAPYE+R+ E+L++ K
Sbjct: 7   GLAVGLNKGHAATQLPVKQRQNRHKGVASKKTKIVRELVREITGFAPYERRVLEMLRISK 66

Query: 431 DKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSA 327
           DKRALK  KR++GTH+RAK KREE+ +V+   R A
Sbjct: 67  DKRALKFLKRRIGTHRRAKGKREELQNVIIAQRKA 101



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>RL36_TRIHM (Q9HFR7) 60S ribosomal protein L36 (TRP36)|
          Length = 105

 Score =  105 bits (261), Expect = 1e-22
 Identities = 55/104 (52%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
 Frame = -2

Query: 635 MAPSQP-KSGLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKR 459
           MA   P K+GL VG+NKGH  T R + PR S  KG  +KR  FVR +++EVAG APYE+R
Sbjct: 1   MAKEAPAKTGLAVGLNKGHKTTARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYERR 60

Query: 458 ITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSA 327
           + ELL+  KDKRA K+AK++LGT  RAK+K +E+  V+ + R A
Sbjct: 61  VIELLRNSKDKRARKLAKKRLGTFGRAKRKVDELQRVIAESRRA 104



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>RL36_CANAL (P47834) 60S ribosomal protein L36 (L39)|
          Length = 99

 Score =  103 bits (258), Expect = 3e-22
 Identities = 49/95 (51%), Positives = 71/95 (74%)
 Frame = -2

Query: 617 KSGLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKV 438
           KSG+  G+NKG   T +E+ P+ S RKG  ++R  FVRS+++EVAG APYE+R+ EL++ 
Sbjct: 3   KSGIAAGVNKGRKTTAKEVAPKISYRKGASSQRTVFVRSIVKEVAGLAPYERRLIELIRN 62

Query: 437 GKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 333
             +KRA K+AK++LGTHKRA +K EEM+ V+ + R
Sbjct: 63  AGEKRAKKLAKKRLGTHKRALRKVEEMTQVIAESR 97



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>RL36_DROME (P49630) 60S ribosomal protein L36 (Protein minute(1)1B)|
          Length = 115

 Score =  102 bits (255), Expect = 7e-22
 Identities = 55/106 (51%), Positives = 69/106 (65%), Gaps = 10/106 (9%)
 Frame = -2

Query: 608 LFVGINKGHVVTKRELPPRPSDRKGKG----------TKRVHFVRSLIREVAGFAPYEKR 459
           L +G+NKGH  +K        D+K KG          T+   F+R L+REV G APYEKR
Sbjct: 7   LAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKR 66

Query: 458 ITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSAGT 321
             ELLKV KDKRALK  KR+LGTH RAK+KREE+S++L ++R A T
Sbjct: 67  TMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRKAQT 112



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>RL36B_YEAST (O14455) 60S ribosomal protein L36-B (L39B) (YL39)|
          Length = 99

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 44/95 (46%), Positives = 68/95 (71%)
 Frame = -2

Query: 617 KSGLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKV 438
           K+G+ +G+NKG  VT+    P+ S +KG  + R  FVRSL+RE+AG +PYE+R+ +L++ 
Sbjct: 3   KTGIAIGLNKGKKVTQMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRN 62

Query: 437 GKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 333
             +KRA KVAK++LG+  RAK K EEM++++   R
Sbjct: 63  SGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 97



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>RL36A_YEAST (P05745) 60S ribosomal protein L36-A (L39A) (YL39)|
          Length = 99

 Score = 93.2 bits (230), Expect = 6e-19
 Identities = 44/95 (46%), Positives = 67/95 (70%)
 Frame = -2

Query: 617 KSGLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIREVAGFAPYEKRITELLKV 438
           K+G+ +G+NKG  VT     P+ S +KG  + R  FVRSL+RE+AG +PYE+R+ +L++ 
Sbjct: 3   KTGIAIGLNKGKKVTSMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRN 62

Query: 437 GKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 333
             +KRA KVAK++LG+  RAK K EEM++++   R
Sbjct: 63  SGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 97



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>ORN_PSESM (Q87VI6) Oligoribonuclease (EC 3.1.-.-)|
          Length = 178

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +1

Query: 301 YFFFSVPVPADLIFLRTLDISSLFFLALLWVPNFRFATFRARLSLPTLRSSVIRFSY 471
           + +  +P   +    R LD+S+L  LA  W P  +F      L+L  +R S+    +
Sbjct: 114 FLYRHMPALENYFHYRNLDVSTLKELAARWAPELKFKKGSTHLALDDIRESIAELRF 170



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>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6|
          Length = 249

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -2

Query: 476 APYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS 354
           A Y K + + LK  K+KR  K+AKR+  +  RA + + E S
Sbjct: 207 AEYAKLLAKRLKEAKEKRQEKIAKRRRLSSLRASQSKSESS 247



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>MRGX2_BUNHO (Q4QXU6) Mas-related G-protein coupled receptor member X2|
          Length = 329

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = -2

Query: 170 CEIFDLLCKAWLSPCF-------LGLLFHYLLASCGIHCLWLWLTIGLRVVNF 33
           C+IFD +  AWL   F       L LL   L  S G+    L+LTI L V+ F
Sbjct: 180 CQIFDFITAAWLIFLFVVLCASSLALLVRILCGSRGLPLTRLYLTILLTVLVF 232



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>ORN_PASMU (P57885) Oligoribonuclease (EC 3.1.-.-)|
          Length = 184

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +1

Query: 301 YFFFSVPVPADLIFLRTLDISSLFFLALLWVPNF--RFATFRARLSLPTLRSSVIRFSY 471
           + F  +P  AD    R LD+S+L  LA  W P+    F      L+L  +R S+   +Y
Sbjct: 115 FLFKYMPELADYFHYRHLDVSTLKELASRWKPDVLKGFTKKNTHLALDDIRESIAELAY 173



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>MRGX2_PANTR (Q4QXX9) Mas-related G-protein coupled receptor member X2|
          Length = 329

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = -2

Query: 170 CEIFDLLCKAWLSPCF-------LGLLFHYLLASCGIHCLWLWLTIGLRVVNF 33
           C+ FDL+  AWL   F       L LL   L  S G+    L+LTI L V+ F
Sbjct: 179 CQTFDLITAAWLIFLFMVLCGSSLALLVRILCGSRGLPLTRLYLTILLTVLVF 231



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>MRGX2_GORGO (Q4QXU0) Mas-related G-protein coupled receptor member X2|
          Length = 329

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = -2

Query: 170 CEIFDLLCKAWLSPCF-------LGLLFHYLLASCGIHCLWLWLTIGLRVVNF 33
           C+ FDL+  AWL   F       L LL   L  S G+    L+LTI L V+ F
Sbjct: 179 CQTFDLITAAWLIFLFMVLCGSSLALLVRILCGSRGLPLTRLYLTILLTVLVF 231



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>ORN_MANSM (Q65SE1) Oligoribonuclease (EC 3.1.-.-)|
          Length = 186

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +1

Query: 301 YFFFSVPVPADLIFLRTLDISSLFFLALLWVPNF--RFATFRARLSLPTLRSSVIRFSY 471
           + F  +P  AD    R LD+S+L  LA  W P     F      L+L  +R S+   +Y
Sbjct: 115 FLFKYMPELADYFHYRHLDVSTLKELARRWKPELLNGFEKKNTHLALDDIRESIAELAY 173



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>SRP54_AQUAE (O67615) Signal recognition particle protein (Fifty-four homolog)|
          Length = 454

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 13/55 (23%), Positives = 29/55 (52%)
 Frame = -2

Query: 488 VAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSAG 324
           +    P E+R  +++ + + KR  + +   +    +  K+ EEM  ++RK++ AG
Sbjct: 371 INSMTPEERRNPKIINMSRKKRIARGSGTTVSDVNKLLKRYEEMKKMMRKLQKAG 425



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>LMD1_HUMAN (P29536) Leiomodin-1 (Leiomodin, muscle form) (64 kDa autoantigen|
           D1) (64 kDa autoantigen 1D) (64 kDa autoantigen 1D3)
           (Thyroid-associated ophthalmopathy autoantigen) (Smooth
           muscle leiomodin) (SM-Lmod)
          Length = 572

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 30/117 (25%)
 Frame = -2

Query: 599 GINKGHVVTKRELPPRPSDRKGKGTKRVHFVRSLIRE------VAGFAPYEKRI------ 456
           G  +G   +K+ L PR +   GK  KR    +S  R+       +G  P E++I      
Sbjct: 73  GQERGRDASKKALGPRRNSDLGKEPKRGGLKKSFSRDRDEAGGKSGEKPKEEKIIRGIDK 132

Query: 455 ------TELLKVGKD----KRALKVAK--------RKLGTHKRAKKKREEMSSVLRK 339
                  +  + GKD    +RA+   K        R  G  +   KKREEM  V +K
Sbjct: 133 GRVRAAVDKKEAGKDGRGEERAVATKKEEEKKGGDRNTGLSRDKDKKREEMKEVAKK 189



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>IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2|
          Length = 959

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 10/104 (9%)
 Frame = -2

Query: 641 SPMAPSQPKSGLFVGINKGHVVTKRELP----------PRPSDRKGKGTKRVHFVRSLIR 492
           +P APS P       + K HV  +R +           PRP+DR G        + +L R
Sbjct: 107 APAAPSAP-------VTKPHVAQQRPVHQRPGGQQAQRPRPADRSGM------VLNTLSR 153

Query: 491 EVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREE 360
                        ++ +V +  RA++ AKR+     R  K+REE
Sbjct: 154 SEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEREE 197



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>IF2_BRUAB (Q57AA0) Translation initiation factor IF-2|
          Length = 959

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 10/104 (9%)
 Frame = -2

Query: 641 SPMAPSQPKSGLFVGINKGHVVTKRELP----------PRPSDRKGKGTKRVHFVRSLIR 492
           +P APS P       + K HV  +R +           PRP+DR G        + +L R
Sbjct: 107 APAAPSAP-------VTKPHVAQQRPVHQRPGGQQAQRPRPADRSGM------VLNTLSR 153

Query: 491 EVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREE 360
                        ++ +V +  RA++ AKR+     R  K+REE
Sbjct: 154 SEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEREE 197



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>IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2|
          Length = 959

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 10/104 (9%)
 Frame = -2

Query: 641 SPMAPSQPKSGLFVGINKGHVVTKRELP----------PRPSDRKGKGTKRVHFVRSLIR 492
           +P APS P       + K HV  +R +           PRP+DR G        + +L R
Sbjct: 107 APAAPSAP-------VTKPHVAQQRPVHQRPGGQQAQRPRPADRSGM------VLNTLSR 153

Query: 491 EVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREE 360
                        ++ +V +  RA++ AKR+     R  K+REE
Sbjct: 154 SEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEREE 197


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,866,976
Number of Sequences: 219361
Number of extensions: 1941654
Number of successful extensions: 6034
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6023
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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