>CC14A_MOUSE (Q6GQT0) Dual specificity protein phosphatase CDC14A (EC 3.1.3.48)|
           (EC 3.1.3.16) (CDC14 cell division cycle 14 homolog A)
          Length = 603

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
 Frame = -3

Query: 511 PDPHVPEEYSVSLAEPWMSQNSTVQYIPSASQGGLSYIPGQVQDSHI---LNSAQQGHFP 341
           P  H  +E   SL        S ++  PS S+G ++ I   + D  I   L+  Q     
Sbjct: 319 PQQHFLKEKQASLWVQGDIFRSKLKNRPS-SEGSITKIISTLDDMSIGANLSKLQSTERI 377

Query: 340 PRNPFDE*GLLVKNGADDGQMRRLIRTARNPK-GPSGVLYA*DQKHHSRYLRFHCLTPSS 164
             N F++  + +KN    G   R +++ R+P+  PS    + D K H R +       SS
Sbjct: 378 GENNFEDEDMEIKNNVTQGDKLRALKSQRHPRSSPSCAFRSDDMKGHQRAMAQTFRLSSS 437

Query: 163 P 161
           P
Sbjct: 438 P 438

>RFIP1_RAT (Q3B7T9) Rab11 family-interacting protein 1 (Rab11-FIP1)|
           (Rab-coupling protein)
          Length = 648

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
 Frame = -3

Query: 640 PLQPQLGMAPQPGKSTNPFDMAFESDVEANDMFMDLTSLQATLPDPHVPEEYSVS-LAEP 464
           P +  + +A Q G S NPF+ A  SD+EA+         +  +P P  P+  +V     P
Sbjct: 486 PEKDAVPVASQWGSSQNPFEDAQISDLEAS--VESKCEPKPPVPVPRTPQTRAVKPRPHP 543

Query: 463 WMSQNSTVQYIPSASQGGLSYIPGQVQDSHILNSAQQGHFPPRNP 329
               N+T   I ++S G  + I       +++N A    + P +P
Sbjct: 544 VKPMNTTAPKITNSSLGTATII-----SENLINEALMKKYQPSDP 583

>IE0_NPVLD (O36453) Immediate-early protein IE-0 (Immediate early 0 protein)|
           (Immediate early transactivator 0)
          Length = 258

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -1

Query: 114 ESFHLKQSCCVLQLC--CILRVWRFCSAQFVICP 19
           E F     CC  ++C  C  ++W FC+  + +CP
Sbjct: 201 EQFLKPNVCCGYRVCNACYAKLWEFCTGAYPVCP 234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,905,917
Number of Sequences: 219361
Number of extensions: 2381108
Number of successful extensions: 6191
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6189
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)