ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal41b15 |
|---|---|
| Clone Library Name | barley_pub |
>RL71_ARATH (P60040) 60S ribosomal protein L7-1| Length = 242 Score = 79.7 bits (195), Expect = 2e-15 Identities = 38/58 (65%), Positives = 42/58 (72%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 109 +HEILTVGPHFKEANN KRNHYVEGGDAGNREN+IN+L+RRMN Sbjct: 185 IHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242
>RL72_ARATH (P60039) 60S ribosomal protein L7-2| Length = 242 Score = 79.3 bits (194), Expect = 2e-15 Identities = 38/58 (65%), Positives = 42/58 (72%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 109 +HEI+TVGPHFKEANN KRNHYVEGGDAGNREN+IN+LVRRMN Sbjct: 185 IHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242
>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3| Length = 244 Score = 79.3 bits (194), Expect = 2e-15 Identities = 38/58 (65%), Positives = 42/58 (72%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 109 +HEI+TVGPHFKEANN KRNHYVEGGDAGNREN+IN+LVRRMN Sbjct: 187 IHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244
>RL7_HUMAN (P18124) 60S ribosomal protein L7| Length = 248 Score = 62.0 bits (149), Expect = 4e-10 Identities = 31/58 (53%), Positives = 36/58 (62%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 109 +HEI TVG FKEANN K H+VEGGDAGNRE+ IN+L+RRMN Sbjct: 191 IHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248
>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7| Length = 248 Score = 62.0 bits (149), Expect = 4e-10 Identities = 31/58 (53%), Positives = 36/58 (62%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 109 +HEI TVG FKEANN K H+VEGGDAGNRE+ IN+L+RRMN Sbjct: 191 IHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248
>RL7_MOUSE (P14148) 60S ribosomal protein L7| Length = 270 Score = 62.0 bits (149), Expect = 4e-10 Identities = 31/58 (53%), Positives = 36/58 (62%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 109 +HEI TVG FKEANN K H+VEGGDAGNRE+ IN+L+RRMN Sbjct: 213 IHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270
>RL7_RAT (P05426) 60S ribosomal protein L7| Length = 260 Score = 62.0 bits (149), Expect = 4e-10 Identities = 31/58 (53%), Positives = 36/58 (62%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 109 +HEI TVG FKEANN K H+VEGGDAGNRE+ IN+L+RRMN Sbjct: 203 IHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 260
>RL7_CAEEL (O01802) 60S ribosomal protein L7| Length = 244 Score = 59.7 bits (143), Expect = 2e-09 Identities = 30/56 (53%), Positives = 34/56 (60%) Frame = -3 Query: 279 HEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 112 HEI TVGPHFKEA N K NH+VEGGD GNRE+ IN L+R+M Sbjct: 188 HEIATVGPHFKEATNFLWPFKLNNPTGGWTKKTNHFVEGGDFGNREDQINNLLRKM 243
>RL7_DROME (P32100) 60S ribosomal protein L7| Length = 252 Score = 56.6 bits (135), Expect = 2e-08 Identities = 29/57 (50%), Positives = 35/57 (61%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 112 VHEI TVGP+FK A+N K NHYV GGD GNRE+ IN+L+R+M Sbjct: 195 VHEIFTVGPNFKYASNFLWPFKLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKM 251
>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)| Length = 243 Score = 56.6 bits (135), Expect = 2e-08 Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 2/60 (3%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRN--HYVEGGDAGNRENYINQLVRRMN 109 +HEI+TVGPHFK+ANN R H+++GG GNRE +IN+LV+ MN Sbjct: 184 IHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKAMN 243
>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)| Length = 243 Score = 56.6 bits (135), Expect = 2e-08 Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 2/60 (3%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRN--HYVEGGDAGNRENYINQLVRRMN 109 +HEI+TVGPHFK+ANN R H+++GG GNRE +IN+LV+ MN Sbjct: 184 IHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKSMN 243
>RL7_ASHGO (Q755A7) 60S ribosomal protein L7| Length = 243 Score = 55.8 bits (133), Expect = 3e-08 Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 2/60 (3%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKR--NHYVEGGDAGNRENYINQLVRRMN 109 +HEI+TVGPHFK+ANN R H+++GG GNRE +IN+LV+ MN Sbjct: 184 IHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNREEFINKLVKSMN 243
>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7| Length = 248 Score = 55.5 bits (132), Expect = 4e-08 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRRMN 109 +HEI TVGP+FK+A+N ++ H++EGGD GNRE +IN L+R+MN Sbjct: 190 IHEIYTVGPNFKQASNFLWPFKLSNPTGGFRTRKFKHFIEGGDLGNREEHINALIRQMN 248
>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7| Length = 244 Score = 55.5 bits (132), Expect = 4e-08 Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 2/60 (3%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRN--HYVEGGDAGNRENYINQLVRRMN 109 +HEI+TVGPHFK+ANN R H+++GG GNRE +IN+LV+ MN Sbjct: 185 IHEIVTVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNREQFINKLVKAMN 244
>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7| Length = 241 Score = 54.7 bits (130), Expect = 6e-08 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRN-HYVEGGDAGNRENYINQLVRRMN 109 +HEI TVGP+FK+ANN ++ H+++GGD GNRE +IN LV++MN Sbjct: 183 IHEIYTVGPNFKQANNFLWPFKLSNPNGGFRTRKFFHFIQGGDTGNREEFINALVKQMN 241
>RL7_DICDI (P11874) 60S ribosomal protein L7| Length = 245 Score = 52.4 bits (124), Expect = 3e-07 Identities = 25/58 (43%), Positives = 33/58 (56%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 109 +HEI T G HFK+ NN K+ +++GGDAGNRE+ IN L+ RMN Sbjct: 188 IHEITTCGKHFKQVNNSLWPFKLNCPRGGFNMKKTPFLQGGDAGNREHLINNLIHRMN 245
>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C| Length = 251 Score = 50.8 bits (120), Expect = 9e-07 Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRRM 112 +HEI TVGP+FK+A N ++ H++EGGDAG R+ +IN LVR+M Sbjct: 193 IHEIYTVGPNFKQAANFIWPFQLSSPLGGWRDRKFKHFIEGGDAGKRDEHINSLVRKM 250
>RL7_YARLI (Q6C603) 60S ribosomal protein L7| Length = 250 Score = 48.5 bits (114), Expect = 4e-06 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRN--HYVEGGDAGNRENYINQLVRRMN 109 +HEI TVGP FK+A+N +R HY+EGG GNRE IN L++ N Sbjct: 191 IHEIYTVGPAFKQASNFLWPFKLSNPSGGWGVRRKFKHYIEGGSTGNREENINALIKAQN 250
>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B| Length = 250 Score = 48.5 bits (114), Expect = 4e-06 Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRRM 112 +HEI TVGP+FK+A N ++ H++EGGDAG R+ +IN LV++M Sbjct: 192 IHEIYTVGPNFKQAANFLWPFKLSSPLGGWRERKFKHFIEGGDAGKRDEHINGLVQKM 249
>IDE_MOUSE (Q9JHR7) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1019 Score = 31.2 bits (69), Expect = 0.71 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +2 Query: 20 KRMHVHHPLPNVKQVYPSNTGYYQG 94 + ++V P+P+++Q Y SN GYY G Sbjct: 311 RNLYVTFPIPDLQQYYKSNPGYYLG 335
>RL7A_SCHPO (P17937) 60S ribosomal protein L7-A| Length = 249 Score = 29.6 bits (65), Expect = 2.1 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRR 115 +HEI VG HFKE K+ H+ EG AG IN+L+++ Sbjct: 191 IHEIYNVGSHFKEVTKFLWPFTLTPVKHSLMEKKVKHFNEGRKAGYCGEEINELIKK 247
>IDE_RAT (P35559) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1019 Score = 29.3 bits (64), Expect = 2.7 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +2 Query: 20 KRMHVHHPLPNVKQVYPSNTGYYQG 94 + ++V P+P+++Q Y SN G+Y G Sbjct: 311 RNLYVTFPIPDLQQYYKSNPGHYLG 335
>EGR1_COTJA (O73692) Early growth response protein 1 (EGR-1) (Zinc finger| protein ZENK) (Fragment) Length = 194 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +2 Query: 2 SSSEYKKRMHVHHPLPNVKQVYPSNTGYYQGAHST*F 112 +SS Y H P P++ YPS T +Q +T F Sbjct: 126 ASSSYPSPAHTAFPSPSIATTYPSGTATFQTQVATSF 162
>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1| Length = 246 Score = 28.5 bits (62), Expect = 4.6 Identities = 17/58 (29%), Positives = 24/58 (41%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 109 +HEI G HF+E + + E G G R INQL+R++N Sbjct: 189 IHEIAFPGKHFQEISWFLRPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246
>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1| Length = 246 Score = 28.1 bits (61), Expect = 6.0 Identities = 17/58 (29%), Positives = 24/58 (41%) Frame = -3 Query: 282 VHEILTVGPHFKEANNXXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 109 +HEI G HF+E + + E G G R INQL+R++N Sbjct: 189 IHEIAFPGKHFQEISWFLCPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246
>IDE_HUMAN (P14735) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1018 Score = 27.7 bits (60), Expect = 7.9 Identities = 9/25 (36%), Positives = 18/25 (72%) Frame = +2 Query: 20 KRMHVHHPLPNVKQVYPSNTGYYQG 94 + ++V P+P++++ Y SN G+Y G Sbjct: 310 RNLYVTFPIPDLQKYYKSNPGHYLG 334 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,324,515 Number of Sequences: 219361 Number of extensions: 431756 Number of successful extensions: 888 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 867 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 869 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
