>MIA40_DEBHA (Q6BSK8) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 249

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 19/48 (39%), Positives = 20/48 (41%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 345
           WD  C G    GP GE F + F  FI   S P     CI  F S   C
Sbjct: 144 WDCPCLGGMAHGPCGEEFKEAFACFIYSESEPKGI-ECIKKFESMRNC 190

>MIA40_SCHPO (P87059) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 313

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 345
           WD  C G    GP GE F   F  F+   S P     C+  F +  AC
Sbjct: 197 WDCPCLGGMAHGPCGEEFKAAFSCFVYSKSEPKG-MECLDKFQAMQAC 243

>MIA40_CANAL (O94030) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 252

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIACMLR 354
           WD  C G    GP GE F + F  F+   + P     CI  F +  +C  R
Sbjct: 150 WDCPCLGGMAHGPCGEEFKEAFSCFVFSETEPKGI-DCIKKFENMRSCFKR 199

>ATG2_MAGGR (Q51ZN8) Autophagy-related protein 2|
          Length = 2077

 Score = 33.1 bits (74), Expect = 0.65
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = -1

Query: 608 GLEPSKSPEETNAETVPKKNELPIASANNPPAGPSTTVQGDMHRSGNQNP 459
           GL+ S   E++++   P    +P +S  N  AGP +++QG+ H   +Q+P
Sbjct: 532 GLDASTISEQSDSSPAPI---IPPSSDGNTEAGPESSIQGERHDRKSQSP 578

>MIA40_KLULA (Q6CSA1) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 406

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 345
           WD  C G    GP GE F   F  F+   + P     C+  FS+   C
Sbjct: 280 WDCPCLGGMAYGPCGEEFKSAFSCFVYSEADPKGI-NCVEKFSTMQNC 326

>MIA40_ASPFU (Q4WGL2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 297

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/51 (33%), Positives = 19/51 (37%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIACMLR 354
           WD  C G    GP GE F   F  F+  +  P     CI  F     C  R
Sbjct: 150 WDCPCLGGMAHGPCGEEFKAAFSCFVYSTEEPKG-MDCIDKFKGMQECFRR 199

>MIA40_CRYNE (Q5KGA4) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 242

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 16/48 (33%), Positives = 19/48 (39%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 345
           WD  C G    GP GE F   F  F+   + P     C+ LF     C
Sbjct: 142 WDCPCLGGMATGPCGEQFKAAFSCFVYSEAEPKGV-DCVELFKVMQDC 188

>MIA40_NEUCR (Q7S3S2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 298

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 345
           WD  C G    GP GE F   F  F+  +  P     CI  FS    C
Sbjct: 189 WDCPCLGGMAHGPCGEEFKAAFSCFVYSTEEPKG-MDCIEKFSHMQDC 235

>MIA40_CANGA (Q6FW26) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 404

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 16/51 (31%), Positives = 19/51 (37%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIACMLR 354
           WD  C G    GP GE F   F  F+   + P     C+  F     C  R
Sbjct: 289 WDCPCLGGMAHGPCGEEFKAAFSCFVYSEAEPKGI-DCVEKFQHMQDCFRR 338

>MIA40_GIBZE (Q4IK03) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 391

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 345
           WD  C G   +GP GE F   F  F+     P     CI  F     C
Sbjct: 150 WDCPCLGGMADGPCGEEFKTAFSCFVFSQEEPKG-MDCIDKFQGMQEC 196

>MIA40_YEAST (P36046) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 403

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 15/48 (31%), Positives = 18/48 (37%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 345
           WD  C G    GP GE F   F  F+   + P     C+  F     C
Sbjct: 294 WDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGI-DCVEKFQHMQDC 340

>VGP_EBORS (Q89853) Structural glycoprotein precursor (Virion spike|
           glycoprotein) [Contains: GP1; GP2]
          Length = 677

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
 Frame = -1

Query: 590 SPEETNAETVPKKNELPIASANNPPAGPST-TVQGDMHRSGNQNPYWSERYDRLQTYLEN 414
           SP   + ET+      PI  +NN    P T T          Q+P  +    +L T   +
Sbjct: 414 SPPSASNETIDHSEMNPIQGSNNSAQSPQTKTTPAPTASPMTQDPQETANSSKLGTSPGS 473

Query: 413 CDRSSQEGYMRMLRTLSAAGRSMHAIELEKRAI 315
               SQ G+   + T+S    S+     +KR++
Sbjct: 474 AAEPSQPGF--TINTVSKVADSLSPTRKQKRSV 504

>MUCB1_XENLA (P38565) Integumentary mucin B.1 (FIM-B.1) (Fragment)|
          Length = 398

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -1

Query: 602 EPSKSPEETNAETVPKKNELPIASANNPPAGPSTTVQGDMHRSGNQNPYWSE 447
           E + +P ET  E+ P  +E  + S  + PA   TTV      SG   P  SE
Sbjct: 42  ESTPAPSETTGESTPAPSETTVPSGESTPAPSETTVPS--VPSGESTPAPSE 91

>MIA40_USTMA (Q4P8D2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 247

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 15/48 (31%), Positives = 19/48 (39%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 345
           WD  C G    GP GE F   F  F+   + P     C+  F +   C
Sbjct: 147 WDCPCLGGMAHGPCGEQFKLAFSCFVYSEAEPKGI-DCVDKFKAMQDC 193

>HYUB_PSESN (Q01263) Hydantoin utilization protein B (ORF3)|
          Length = 592

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 162 IFGSTDIASTVSFLGRPLQRILLRRTVWRNFPQNIQSLHPLQL 290
           + G+ DIA  ++     L+ ILL  TV+ NFPQN   + P+++
Sbjct: 301 LLGTVDIAIYLT-----LRSILLDSTVYGNFPQNSGLIRPIKI 338

>CCL1_YEAST (P37366) Cyclin CCL1|
          Length = 393

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
 Frame = -1

Query: 593 KSPEETNAETVPKKNE---LPIASANNPPAGPSTTVQGDMHRSGNQNPYWSERYDRLQ-T 426
           KS  +T + T+  K +   L  A  NN P         D++R  +Q   WS   D+LQ  
Sbjct: 9   KSTLDTPSATMSAKEKEAKLKSADENNKPPNYKRISDDDLYRHSSQYRMWSYTKDQLQEK 68

Query: 425 YLENCDRSSQEGYMRMLRTLSAAGRSMHAIE-LEKRAIHLLVEEGKELQRMKALNV 261
            ++   R+       +L+   A   +   I+ LE +AI L +EE  +L    A  V
Sbjct: 69  RVDTNARAIAYIEENLLKFREAHNLTEEEIKVLEAKAIPLTMEEELDLVNFYAKKV 124

>NCA12_XENLA (P36335) Neural cell adhesion molecule 1-B precursor|
          Length = 1092

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -1

Query: 599  PSKSPEETNAETV---PKKNELPIASANNPPAGPSTTVQGDMHRSGNQNP 459
            PS +P+    ++V   P K E+P AS+  P + P      D+  +   NP
Sbjct: 855  PSTAPDSNTVQSVQATPSKAEVPTASSPPPTSSPKVAPLVDLSDTPTNNP 904

>MIA40_EMENI (P0C1D2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 283

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 345
           WD  C G    GP GE F   F  F+     P     CI  F +   C
Sbjct: 150 WDCPCLGGMAYGPCGEEFRAAFSCFVYSEEEPKG-MDCIDKFKAMQDC 196

>CYSP3_OSTOS (Q06544) Cathepsin B-like cysteine proteinase 3 (EC 3.4.22.-)|
           (Fragment)
          Length = 174

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -1

Query: 467 QNPYWSERYDRLQTYLENCDRSSQEGYMRMLRTLSAAGRSMHAIELEKRAI 315
           + PY+ E YD  +T    C ++ Q GY++  +     G+S + +    +AI
Sbjct: 35  KEPYYGECYDTAKT--PKCQKTCQRGYLKAYKEDKHFGKSAYRLPNNVKAI 83

>YA99_SCHPO (Q09787) Hypothetical protein C13G6.09 in chromosome I|
          Length = 274

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 605 LEPSKSPEETNAETVPKKNELPIASANNPPAGPSTTVQGDM 483
           +E    P+E N + +P+K +       NP A P T  +GD+
Sbjct: 120 IEVDAEPKEENKKEIPEKLKNVKVDTENPSAEPYTKAKGDV 160

>MIA40_ASPOR (Q2USJ2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 187

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 15/42 (35%), Positives = 16/42 (38%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALF 327
           WD  C G    GP GE F   F  F+     P     CI  F
Sbjct: 144 WDCPCLGGMAHGPCGEEFKAAFSCFVYSEEEPKG-MDCIEKF 184

>MIA40_ASHGO (Q757A5) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 266

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 15/48 (31%), Positives = 18/48 (37%)
 Frame = +1

Query: 202 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 345
           WD  C G    GP GE F   F  F+   + P     C+  F     C
Sbjct: 185 WDCPCLGGMAHGPCGEEFKAAFACFVYSEAEPKGI-DCVEKFQVMQDC 231


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,533,891
Number of Sequences: 219361
Number of extensions: 1732212
Number of successful extensions: 5020
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5016
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)