>PETM_SPIOL (P80883) Cytochrome b6-f complex subunit 7 (Cytochrome b6-f complex|
           subunit VII) (Cytochrome b6-f complex subunit petM)
           (Fragment)
          Length = 36

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = -3

Query: 298 NAAGEIFQIAVVMNALTLVGVAVGFVLLR 212
           NAA EIF+IA VMN LTLVGVA+GFVLLR
Sbjct: 1   NAAAEIFRIAAVMNGLTLVGVAIGFVLLR 29

>PETM_CHLRE (Q42496) Cytochrome b6-f complex subunit 7, chloroplast precursor|
           (Cytochrome b6-f complex subunit VII) (Cytochrome b6-f
           complex subunit petM) (Cytochrome b6-f complex 4 kDa
           subunit)
          Length = 99

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 10/56 (17%)
 Frame = -3

Query: 349 SLSPAGKRRGGTFGAQCNAAGEIFQIA----------VVMNALTLVGVAVGFVLLR 212
           SL  AG++   + G    A  E+  IA          + M  +TLVG+A+GFVLLR
Sbjct: 34  SLRTAGQKAAPSRGVATKAVNELAMIAGEAEFIAGTALTMVGMTLVGLAIGFVLLR 89

>PETM_CYAPA (P48366) Cytochrome b6-f complex subunit 7 (Cytochrome b6-f complex|
           subunit VII) (Cytochrome b6-f complex subunit petM)
          Length = 33

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = -3

Query: 286 EIFQIAVVMNALTLVGVAVGFVLLR 212
           +IF  AV+   LTL+G+++GFVLL+
Sbjct: 4   QIFNTAVICFTLTLIGLSLGFVLLK 28

>PETM_GLOVI (Q7NLN8) Cytochrome b6-f complex subunit 7 (Cytochrome b6-f complex|
           subunit VII) (Cytochrome b6-f complex subunit petM)
          Length = 36

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/26 (53%), Positives = 21/26 (80%)
 Frame = -3

Query: 289 GEIFQIAVVMNALTLVGVAVGFVLLR 212
           GEIF +A ++  LTLVG+A+GF +L+
Sbjct: 3   GEIFFVAGLVFVLTLVGMAIGFGVLK 28

>PETM_EMIHU (Q4G3B3) Cytochrome b6-f complex subunit 7 (Cytochrome b6-f complex|
           subunit VII) (Cytochrome b6-f complex subunit petM)
          Length = 32

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = -3

Query: 292 AGEIFQIAVVMNALTLVGVAVGFVLLR 212
           A EIF +A VM AL L G++VGF LL+
Sbjct: 2   AKEIFTVAGVMWALVLTGLSVGFGLLK 28

>PETM_PORPU (P51275) Cytochrome b6-f complex subunit 7 (Cytochrome b6-f complex|
           subunit VII) (Cytochrome b6-f complex subunit petM)
          Length = 32

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = -3

Query: 286 EIFQIAVVMNALTLVGVAVGFVLLR 212
           EI + A++ + L LVG+AVGF+LL+
Sbjct: 4   EIVESAILSSVLVLVGLAVGFLLLK 28

>PETM_SYNEL (Q8DJ15) Cytochrome b6-f complex subunit 7 (Cytochrome b6-f complex|
           subunit VII) (Cytochrome b6-f complex subunit petM)
          Length = 33

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 292 AGEIFQIAVVMNALTLVGVAVGFVLLR 212
           A EIF  AV+   L LVG+  G++LLR
Sbjct: 2   AEEIFNTAVITFTLVLVGLGAGYLLLR 28


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,829,286
Number of Sequences: 219361
Number of extensions: 816253
Number of successful extensions: 2170
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2170
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)