ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal40l23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469900.1| Oryza sativa (japonica cultivar-group), mRNA 236 5e-59
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 236 5e-59
3gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genom... 236 5e-59
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 236 5e-59
5dbj|AK058858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 5e-59
6gb|AY104114.1| Zea mays PCO099391 mRNA sequence 186 4e-44
7gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 46 0.093
8gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete se... 46 0.093
9emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in ... 46 0.093
10gb|AE014825.1| Plasmodium falciparum 3D7 chromosome 14 section 1... 44 0.37
11gb|AC099308.2| Drosophila melanogaster clone BACR11M14, complete... 44 0.37
12emb|CR376827.6| Zebrafish DNA sequence from clone CH211-154C21 i... 44 0.37
13gb|AE003569.4| Drosophila melanogaster chromosome X, section 70 ... 44 0.37
14gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 44 0.37
15gb|AC122357.4| Mus musculus BAC clone RP23-403O8 from chromosome... 42 1.5
16gb|AC124426.4| Mus musculus BAC clone RP24-231B8 from chromosome... 42 1.5
17gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, com... 42 1.5
18emb|AJ586577.1| Xanthomonas albilineans XALB2 region involved in... 42 1.5
19gb|AF191324.1|AF191324 Xanthomonas albilineans phosphopantethein... 42 1.5
20gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
21dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.5
22emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in ... 42 1.5
23emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 i... 42 1.5
24gb|AC007751.3|AC007751 Homo sapiens, clone 5_A_11, complete sequ... 42 1.5
25emb|BX927101.19| Zebrafish DNA sequence from clone CH211-120F16 ... 42 1.5
26emb|CT030240.7| Mouse DNA sequence from clone RP23-26N21 on chro... 42 1.5
27emb|CT030722.6| Mouse DNA sequence from clone RP23-191N15 on chr... 42 1.5
28dbj|AP004288.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.5
29ref|XM_475853.1| Oryza sativa (japonica cultivar-group), predic... 40 5.8
30ref|XM_466377.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
31ref|XM_466376.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
32gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 5.8
33gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
34gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.8
35emb|AL954134.16| Zebrafish DNA sequence from clone CH211-267E7, ... 40 5.8
36gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
37emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.8
38emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 5.8
39emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 40 5.8
40emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 5.8
41emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 40 5.8
42emb|CR354535.11| Zebrafish DNA sequence from clone CH211-199M16 ... 40 5.8
43emb|CR457444.6| Zebrafish DNA sequence from clone CH211-11C3 in ... 40 5.8
44emb|BX546500.7| Zebrafish DNA sequence from clone DKEY-15L19 in ... 40 5.8
45emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in... 40 5.8
46emb|BX957270.8| Zebrafish DNA sequence from clone DKEYP-14F10 in... 40 5.8
47emb|BX247901.12| Zebrafish DNA sequence from clone CH211-206H4 i... 40 5.8
48gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
49emb|BX294110.8| Zebrafish DNA sequence from clone DKEYP-19H3 in ... 40 5.8
50gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.8
51gb|AC159908.3| Pan troglodytes BAC clone CH251-330C3 from chromo... 40 5.8
52gb|AC016870.8| Homo sapiens chromosome 11, clone RP11-15I16, com... 40 5.8
53gb|AC013478.7| Homo sapiens BAC clone RP11-563B23 from 2, comple... 40 5.8
54gb|AF102271.1|AF102271 Streptomyces coelicolor sensor-histidine ... 40 5.8
55gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.8
56emb|BX510306.17| Zebrafish DNA sequence from clone CH211-195F19 ... 40 5.8
57dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
58dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
59dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
60dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
61dbj|AK068280.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
62dbj|AK062463.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
63emb|BX510324.7| Zebrafish DNA sequence from clone DKEY-18C8 in l... 40 5.8
64emb|AL672107.5| Zebrafish DNA sequence from clone BUSM1-84N18 in... 40 5.8
65gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.8
66emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 5.8
67emb|AL844192.12| Zebrafish DNA sequence from clone DKEY-245I2, c... 40 5.8
68emb|AL772220.7| Mouse DNA sequence from clone RP23-409N18 on chr... 40 5.8 
>ref|XM_469900.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 612

 Score =  236 bits (119), Expect = 5e-59
 Identities = 220/253 (86%), Gaps = 3/253 (1%)
 Strand = Plus / Minus

                                                                       
Query: 180 cactcctccgactcctcgtaggccgcctcggcccggagcagcacgaagccgacggcgacg 239
           |||| |||||||||||||  |||||||||  |||||||||||||||||||||||||||||
Sbjct: 414 cactactccgactcctcgacggccgcctccacccggagcagcacgaagccgacggcgacg 355

                                                                       
Query: 240 ccgacgagcgtgagcgcgttcatgacgacggcgatctggaagatctccccggcggcgttg 299
           |||||||||  |||| ||||||||| ||||||||||  ||| ||||| ||||||||||||
Sbjct: 354 ccgacgagcacgagcccgttcatgatgacggcgatcctgaatatctcaccggcggcgttg 295

                                                                       
Query: 300 cactgcgcgccgaacgtgccgccgcgcctcttc---ccggcggggctgagcgacgcgacg 356
           |||||||| ||||||| ||||||||| ||||||   ||||||||||| |||   || || 
Sbjct: 294 cactgcgccccgaacgcgccgccgcggctcttcccgccggcggggctcagcttggccacc 235

                                                                       
Query: 357 accctggcgaacttgtagtcggcgctcttgcgcacgcccagcatggtcaccttgttgagc 416
           ||| ||||||||  |||||||||| ||||||||||||| |||| ||||||||||||||||
Sbjct: 234 accttggcgaacgagtagtcggcggtcttgcgcacgccgagcagggtcaccttgttgagc 175

                        
Query: 417 cccttgaggccgc 429
            ||||||| ||||
Sbjct: 174 gccttgagcccgc 162
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  236 bits (119), Expect = 5e-59
 Identities = 220/253 (86%), Gaps = 3/253 (1%)
 Strand = Plus / Minus

                                                                            
Query: 180      cactcctccgactcctcgtaggccgcctcggcccggagcagcacgaagccgacggcgacg 239
                |||| |||||||||||||  |||||||||  |||||||||||||||||||||||||||||
Sbjct: 31421762 cactactccgactcctcgacggccgcctccacccggagcagcacgaagccgacggcgacg 31421703

                                                                            
Query: 240      ccgacgagcgtgagcgcgttcatgacgacggcgatctggaagatctccccggcggcgttg 299
                |||||||||  |||| ||||||||| ||||||||||  ||| ||||| ||||||||||||
Sbjct: 31421702 ccgacgagcacgagcccgttcatgatgacggcgatcctgaatatctcaccggcggcgttg 31421643

                                                                            
Query: 300      cactgcgcgccgaacgtgccgccgcgcctcttc---ccggcggggctgagcgacgcgacg 356
                |||||||| ||||||| ||||||||| ||||||   ||||||||||| |||   || || 
Sbjct: 31421642 cactgcgccccgaacgcgccgccgcggctcttcccgccggcggggctcagcttggccacc 31421583

                                                                            
Query: 357      accctggcgaacttgtagtcggcgctcttgcgcacgcccagcatggtcaccttgttgagc 416
                ||| ||||||||  |||||||||| ||||||||||||| |||| ||||||||||||||||
Sbjct: 31421582 accttggcgaacgagtagtcggcggtcttgcgcacgccgagcagggtcaccttgttgagc 31421523

                             
Query: 417      cccttgaggccgc 429
                 ||||||| ||||
Sbjct: 31421522 gccttgagcccgc 31421510
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>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete
             sequence
          Length = 159091

 Score =  236 bits (119), Expect = 5e-59
 Identities = 220/253 (86%), Gaps = 3/253 (1%)
 Strand = Plus / Plus

                                                                         
Query: 180   cactcctccgactcctcgtaggccgcctcggcccggagcagcacgaagccgacggcgacg 239
             |||| |||||||||||||  |||||||||  |||||||||||||||||||||||||||||
Sbjct: 74038 cactactccgactcctcgacggccgcctccacccggagcagcacgaagccgacggcgacg 74097

                                                                         
Query: 240   ccgacgagcgtgagcgcgttcatgacgacggcgatctggaagatctccccggcggcgttg 299
             |||||||||  |||| ||||||||| ||||||||||  ||| ||||| ||||||||||||
Sbjct: 74098 ccgacgagcacgagcccgttcatgatgacggcgatcctgaatatctcaccggcggcgttg 74157

                                                                         
Query: 300   cactgcgcgccgaacgtgccgccgcgcctcttc---ccggcggggctgagcgacgcgacg 356
             |||||||| ||||||| ||||||||| ||||||   ||||||||||| |||   || || 
Sbjct: 74158 cactgcgccccgaacgcgccgccgcggctcttcccgccggcggggctcagcttggccacc 74217

                                                                         
Query: 357   accctggcgaacttgtagtcggcgctcttgcgcacgcccagcatggtcaccttgttgagc 416
             ||| ||||||||  |||||||||| ||||||||||||| |||| ||||||||||||||||
Sbjct: 74218 accttggcgaacgagtagtcggcggtcttgcgcacgccgagcagggtcaccttgttgagc 74277

                          
Query: 417   cccttgaggccgc 429
              ||||||| ||||
Sbjct: 74278 gccttgagcccgc 74290
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  236 bits (119), Expect = 5e-59
 Identities = 220/253 (86%), Gaps = 3/253 (1%)
 Strand = Plus / Minus

                                                                            
Query: 180      cactcctccgactcctcgtaggccgcctcggcccggagcagcacgaagccgacggcgacg 239
                |||| |||||||||||||  |||||||||  |||||||||||||||||||||||||||||
Sbjct: 31512278 cactactccgactcctcgacggccgcctccacccggagcagcacgaagccgacggcgacg 31512219

                                                                            
Query: 240      ccgacgagcgtgagcgcgttcatgacgacggcgatctggaagatctccccggcggcgttg 299
                |||||||||  |||| ||||||||| ||||||||||  ||| ||||| ||||||||||||
Sbjct: 31512218 ccgacgagcacgagcccgttcatgatgacggcgatcctgaatatctcaccggcggcgttg 31512159

                                                                            
Query: 300      cactgcgcgccgaacgtgccgccgcgcctcttc---ccggcggggctgagcgacgcgacg 356
                |||||||| ||||||| ||||||||| ||||||   ||||||||||| |||   || || 
Sbjct: 31512158 cactgcgccccgaacgcgccgccgcggctcttcccgccggcggggctcagcttggccacc 31512099

                                                                            
Query: 357      accctggcgaacttgtagtcggcgctcttgcgcacgcccagcatggtcaccttgttgagc 416
                ||| ||||||||  |||||||||| ||||||||||||| |||| ||||||||||||||||
Sbjct: 31512098 accttggcgaacgagtagtcggcggtcttgcgcacgccgagcagggtcaccttgttgagc 31512039

                             
Query: 417      cccttgaggccgc 429
                 ||||||| ||||
Sbjct: 31512038 gccttgagcccgc 31512026
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>dbj|AK058858.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-E04, full
           insert sequence
          Length = 583

 Score =  236 bits (119), Expect = 5e-59
 Identities = 220/253 (86%), Gaps = 3/253 (1%)
 Strand = Plus / Minus

                                                                       
Query: 180 cactcctccgactcctcgtaggccgcctcggcccggagcagcacgaagccgacggcgacg 239
           |||| |||||||||||||  |||||||||  |||||||||||||||||||||||||||||
Sbjct: 411 cactactccgactcctcgacggccgcctccacccggagcagcacgaagccgacggcgacg 352

                                                                       
Query: 240 ccgacgagcgtgagcgcgttcatgacgacggcgatctggaagatctccccggcggcgttg 299
           |||||||||  |||| ||||||||| ||||||||||  ||| ||||| ||||||||||||
Sbjct: 351 ccgacgagcacgagcccgttcatgatgacggcgatcctgaatatctcaccggcggcgttg 292

                                                                       
Query: 300 cactgcgcgccgaacgtgccgccgcgcctcttc---ccggcggggctgagcgacgcgacg 356
           |||||||| ||||||| ||||||||| ||||||   ||||||||||| |||   || || 
Sbjct: 291 cactgcgccccgaacgcgccgccgcggctcttcccgccggcggggctcagcttggccacc 232

                                                                       
Query: 357 accctggcgaacttgtagtcggcgctcttgcgcacgcccagcatggtcaccttgttgagc 416
           ||| ||||||||  |||||||||| ||||||||||||| |||| ||||||||||||||||
Sbjct: 231 accttggcgaacgagtagtcggcggtcttgcgcacgccgagcagggtcaccttgttgagc 172

                        
Query: 417 cccttgaggccgc 429
            ||||||| ||||
Sbjct: 171 gccttgagcccgc 159
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>gb|AY104114.1| Zea mays PCO099391 mRNA sequence
          Length = 781

 Score =  186 bits (94), Expect = 4e-44
 Identities = 207/244 (84%), Gaps = 3/244 (1%)
 Strand = Plus / Minus

                                                                       
Query: 189 gactcctcgtaggccgcctcggcccggagcagcacgaagccgacggcgacgccgacgagc 248
           |||||||||  ||| |||||  |||||||||||||||| |||||||||||||||||||||
Sbjct: 656 gactcctcgacggcggcctccacccggagcagcacgaacccgacggcgacgccgacgagc 597

                                                                       
Query: 249 gtgagcgcgttcatgacgacggcgatctggaagatctccccggcggcgttgcactgcgcg 308
             |||  ||||||||  | ||||||||  |||||||||  ||||| ||||   ||| |||
Sbjct: 596 acgaggccgttcatggtggcggcgatcctgaagatctcggcggcgtcgttcatctgggcg 537

                                                                       
Query: 309 ccgaacgtgccgccgcgcctcttcccg---gcggggctgagcgacgcgacgaccctggcg 365
           ||||||| ||||||||||| ||||| |   ||||||||||||||||| |||||| |||||
Sbjct: 536 ccgaacgcgccgccgcgccgcttcctgcccgcggggctgagcgacgccacgaccttggcg 477

                                                                       
Query: 366 aacttgtagtcggcgctcttgcgcacgcccagcatggtcaccttgttgagccccttgagg 425
           ||   |||||||||| |||||||||| || |||||| |||||||||||||||||||||||
Sbjct: 476 aaggagtagtcggcggtcttgcgcaccccgagcatgttcaccttgttgagccccttgagg 417

               
Query: 426 ccgc 429
           ||||
Sbjct: 416 ccgc 413
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 224    gaagccgacggcgacgccgacgagcgtgagcgcgttcatgacg 266
              ||||||||||| |||| ||||||| ||||| ||| ||||||||
Sbjct: 891977 gaagccgacggggacggcgacgagtgtgagggcgatcatgacg 891935



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    acgccgacgagcgtgagcgc 256
              ||||||||||||||||||||
Sbjct: 738310 acgccgacgagcgtgagcgc 738329
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>gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete sequence
          Length = 42022

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 223   cgaagccgacggcgacgccgacgagcg 249
             ||||||||||| |||||||||||||||
Sbjct: 20406 cgaagccgacgtcgacgccgacgagcg 20432
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>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25,
             complete sequence
          Length = 169168

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 217   gcagcacgaagccgacggcgacg 239
             |||||||||||||||||||||||
Sbjct: 39799 gcagcacgaagccgacggcgacg 39821
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>gb|AE014825.1| Plasmodium falciparum 3D7 chromosome 14 section 10 of 13 of the complete
              sequence
          Length = 250053

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 47     atacaaaaccaaatgtaaaaat 68
              ||||||||||||||||||||||
Sbjct: 180024 atacaaaaccaaatgtaaaaat 180045
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>gb|AC099308.2| Drosophila melanogaster clone BACR11M14, complete sequence
          Length = 173097

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 225    aagccgacggcgacgccgacga 246
              ||||||||||||||||||||||
Sbjct: 109353 aagccgacggcgacgccgacga 109332
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>emb|CR376827.6| Zebrafish DNA sequence from clone CH211-154C21 in linkage group 14,
             complete sequence
          Length = 110290

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 48    tacaaaaccaaatgtaaaaata 69
             ||||||||||||||||||||||
Sbjct: 85506 tacaaaaccaaatgtaaaaata 85485
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>gb|AE003569.4| Drosophila melanogaster chromosome X, section 70 of 74 of the
            complete sequence
          Length = 283558

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 225  aagccgacggcgacgccgacga 246
            ||||||||||||||||||||||
Sbjct: 3351 aagccgacggcgacgccgacga 3372
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 261     atgacgacggcgatctggaaga 282
               ||||||||||||||||||||||
Sbjct: 6273966 atgacgacggcgatctggaaga 6273987
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>gb|AC122357.4| Mus musculus BAC clone RP23-403O8 from chromosome 13, complete
            sequence
          Length = 203039

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 161  tgctgggtctggtttcactca 181
            |||||||||||||||||||||
Sbjct: 5609 tgctgggtctggtttcactca 5589
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>gb|AC124426.4| Mus musculus BAC clone RP24-231B8 from chromosome 13, complete sequence
          Length = 199585

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 161    tgctgggtctggtttcactca 181
              |||||||||||||||||||||
Sbjct: 196765 tgctgggtctggtttcactca 196745



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 161   tgctgggtctggtttcactca 181
             |||||||||||||||||||||
Sbjct: 82228 tgctgggtctggtttcactca 82208
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>gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, complete sequence
          Length = 198636

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 34     caatttgtcattgatacaaaaccaaatgt 62
              |||| ||||||| ||||||||||||||||
Sbjct: 160620 caatgtgtcatttatacaaaaccaaatgt 160648
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>emb|AJ586577.1| Xanthomonas albilineans XALB2 region involved in albicidin
           biosynthesis
          Length = 2986

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 acgaagccgacggcgacgccg 242
           |||||||||||||||||||||
Sbjct: 583 acgaagccgacggcgacgccg 563
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>gb|AF191324.1|AF191324 Xanthomonas albilineans phosphopantetheinyl transferase gene,
           complete cds
          Length = 2989

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 acgaagccgacggcgacgccg 242
           |||||||||||||||||||||
Sbjct: 586 acgaagccgacggcgacgccg 566
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 203     cgcctcggcccggagcagcac 223
               |||||||||||||||||||||
Sbjct: 2703229 cgcctcggcccggagcagcac 2703209



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 193     cctcgtaggccgcctcggcc 212
               ||||||||||||||||||||
Sbjct: 1136534 cctcgtaggccgcctcggcc 1136515
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 143    agggcaggcacaccacggtgc 163
              |||||||||||||||||||||
Sbjct: 227645 agggcaggcacaccacggtgc 227625
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>emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in linkage group 20,
             complete sequence
          Length = 239874

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    tacaaaaccaaatgtaaaaat 68
             |||||||||||||||||||||
Sbjct: 85881 tacaaaaccaaatgtaaaaat 85861
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>emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 in linkage group 20,
              complete sequence
          Length = 189717

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     tacaaaaccaaatgtaaaaat 68
              |||||||||||||||||||||
Sbjct: 117810 tacaaaaccaaatgtaaaaat 117790
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>gb|AC007751.3|AC007751 Homo sapiens, clone 5_A_11, complete sequence
          Length = 158963

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     atcaatttgtcattgatacaa 52
              |||||||||||||||||||||
Sbjct: 124359 atcaatttgtcattgatacaa 124339
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>emb|BX927101.19| Zebrafish DNA sequence from clone CH211-120F16 in linkage group 2,
             complete sequence
          Length = 162145

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    tacaaaaccaaatgtaaaaat 68
             |||||||||||||||||||||
Sbjct: 14323 tacaaaaccaaatgtaaaaat 14343
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>emb|CT030240.7| Mouse DNA sequence from clone RP23-26N21 on chromosome 13, complete
             sequence
          Length = 175209

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 161   tgctgggtctggtttcactca 181
             |||||||||||||||||||||
Sbjct: 69805 tgctgggtctggtttcactca 69825
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>emb|CT030722.6| Mouse DNA sequence from clone RP23-191N15 on chromosome 13, complete
              sequence
          Length = 187837

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 161    tgctgggtctggtttcactca 181
              |||||||||||||||||||||
Sbjct: 135060 tgctgggtctggtttcactca 135080
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>dbj|AP004288.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1735D4
          Length = 212373

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 32     atcaatttgtcattgatacaa 52
              |||||||||||||||||||||
Sbjct: 162825 atcaatttgtcattgatacaa 162845
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>ref|XM_475853.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 285

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 217 gcagcacgaagccgacggcgacgc 240
           ||||||||| ||||||||||||||
Sbjct: 156 gcagcacgacgccgacggcgacgc 133
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>ref|XM_466377.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1842

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 gaagccgacggcgacgccga 243
           ||||||||||||||||||||
Sbjct: 526 gaagccgacggcgacgccga 507
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>ref|XM_466376.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1548

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 gaagccgacggcgacgccga 243
           ||||||||||||||||||||
Sbjct: 462 gaagccgacggcgacgccga 443
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 215     gagcagcacgaagccgacggcgacgccgacga 246
               ||||||| ||||||||||||| | ||||||||
Sbjct: 1212607 gagcagcccgaagccgacggccatgccgacga 1212576
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>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03,
             complete sequence
          Length = 177861

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 217   gcagcacgaagccgacggcgacgc 240
             ||||||||| ||||||||||||||
Sbjct: 42042 gcagcacgacgccgacggcgacgc 42019
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 217     gcagcacgaagccgacggcg 236
               ||||||||||||||||||||
Sbjct: 2600262 gcagcacgaagccgacggcg 2600281
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>emb|AL954134.16| Zebrafish DNA sequence from clone CH211-267E7, complete sequence
          Length = 160551

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     tacaaaaccaaatgtaaaaa 67
              ||||||||||||||||||||
Sbjct: 145676 tacaaaaccaaatgtaaaaa 145695
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>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05,
              complete sequence
          Length = 141715

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 217    gcagcacgaagccgacggcgacgc 240
              ||||||||| ||||||||||||||
Sbjct: 117227 gcagcacgacgccgacggcgacgc 117204
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 265   cgacggcgatctggaagatctccccggc 292
             ||||||||| | ||||||||||||||||
Sbjct: 62223 cgacggcgacccggaagatctccccggc 62196
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 265    cgacggcgatctggaagatctccccggc 292
              ||||||||| | ||||||||||||||||
Sbjct: 318898 cgacggcgacccggaagatctccccggc 318871
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>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 265    cgacggcgatctggaagatctccccggc 292
              ||||||||| | ||||||||||||||||
Sbjct: 183278 cgacggcgacccggaagatctccccggc 183305
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 221    cacgaagccgacggcgacgccgacgagc 248
              ||||| |||||||||||| |||||||||
Sbjct: 167673 cacgacgccgacggcgacaccgacgagc 167700
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>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    gccgacggcgacgccgacga 246
              ||||||||||||||||||||
Sbjct: 192520 gccgacggcgacgccgacga 192501
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>emb|CR354535.11| Zebrafish DNA sequence from clone CH211-199M16 in linkage group 25,
             complete sequence
          Length = 225139

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    tacaaaaccaaatgtaaaaa 67
             ||||||||||||||||||||
Sbjct: 49652 tacaaaaccaaatgtaaaaa 49633
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>emb|CR457444.6| Zebrafish DNA sequence from clone CH211-11C3 in linkage group 11,
             complete sequence
          Length = 170537

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    tacaaaaccaaatgtaaaaa 67
             ||||||||||||||||||||
Sbjct: 24268 tacaaaaccaaatgtaaaaa 24249
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>emb|BX546500.7| Zebrafish DNA sequence from clone DKEY-15L19 in linkage group 23,
              complete sequence
          Length = 237446

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     tacaaaaccaaatgtaaaaa 67
              ||||||||||||||||||||
Sbjct: 115444 tacaaaaccaaatgtaaaaa 115425
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>emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in linkage group 2,
              complete sequence
          Length = 209097

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     tacaaaaccaaatgtaaaaa 67
              ||||||||||||||||||||
Sbjct: 153733 tacaaaaccaaatgtaaaaa 153714
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>emb|BX957270.8| Zebrafish DNA sequence from clone DKEYP-14F10 in linkage group 4
             Contains four CpG islands, complete sequence
          Length = 143792

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    tacaaaaccaaatgtaaaaa 67
             ||||||||||||||||||||
Sbjct: 42464 tacaaaaccaaatgtaaaaa 42483
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>emb|BX247901.12| Zebrafish DNA sequence from clone CH211-206H4 in linkage group 4
             Contains four CpG islands, complete sequence
          Length = 101223

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    tacaaaaccaaatgtaaaaa 67
             ||||||||||||||||||||
Sbjct: 75503 tacaaaaccaaatgtaaaaa 75484
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>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
              complete sequence
          Length = 166218

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 217    gcagcacgaagccgacggcgacgc 240
              ||||||||| ||||||||||||||
Sbjct: 141730 gcagcacgacgccgacggcgacgc 141707
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>emb|BX294110.8| Zebrafish DNA sequence from clone DKEYP-19H3 in linkage group 25,
              complete sequence
          Length = 176023

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     tacaaaaccaaatgtaaaaa 67
              ||||||||||||||||||||
Sbjct: 168764 tacaaaaccaaatgtaaaaa 168783
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 227     gccgacggcgacgccgacga 246
               ||||||||||||||||||||
Sbjct: 2936374 gccgacggcgacgccgacga 2936393
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>gb|AC159908.3| Pan troglodytes BAC clone CH251-330C3 from chromosome unknown, complete
              sequence
          Length = 199237

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     gatacaaaaccaaatgtaaa 65
              ||||||||||||||||||||
Sbjct: 106484 gatacaaaaccaaatgtaaa 106465
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>gb|AC016870.8| Homo sapiens chromosome 11, clone RP11-15I16, complete sequence
          Length = 108922

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   gatacaaaaccaaatgtaaa 65
            ||||||||||||||||||||
Sbjct: 1609 gatacaaaaccaaatgtaaa 1590
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>gb|AC013478.7| Homo sapiens BAC clone RP11-563B23 from 2, complete sequence
          Length = 137610

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    gatacaaaaccaaatgtaaa 65
             ||||||||||||||||||||
Sbjct: 84853 gatacaaaaccaaatgtaaa 84872
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>gb|AF102271.1|AF102271 Streptomyces coelicolor sensor-histidine kinase and
            response-regulator genes, complete cds; and chitinase
            precursor (chi) gene, partial cds
          Length = 3541

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 221  cacgaagccgacggcgacgccgacgagc 248
            ||||| |||||||||||| |||||||||
Sbjct: 1190 cacgacgccgacggcgacaccgacgagc 1163
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 153     caccacggtgctgggtctgg 172
               ||||||||||||||||||||
Sbjct: 5361305 caccacggtgctgggtctgg 5361286
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>emb|BX510306.17| Zebrafish DNA sequence from clone CH211-195F19 in linkage group 13,
             complete sequence
          Length = 194184

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    tacaaaaccaaatgtaaaaa 67
             ||||||||||||||||||||
Sbjct: 94241 tacaaaaccaaatgtaaaaa 94260
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 217      gcagcacgaagccgacggcgacgc 240
                ||||||||| ||||||||||||||
Sbjct: 27110646 gcagcacgacgccgacggcgacgc 27110623
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 224      gaagccgacggcgacgccga 243
                ||||||||||||||||||||
Sbjct: 22035584 gaagccgacggcgacgccga 22035565



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 224      gaagccgacggcgacgccga 243
                ||||||||||||||||||||
Sbjct: 22029879 gaagccgacggcgacgccga 22029860
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>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0046L23
          Length = 100041

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gaagccgacggcgacgccga 243
             ||||||||||||||||||||
Sbjct: 84206 gaagccgacggcgacgccga 84187



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gaagccgacggcgacgccga 243
             ||||||||||||||||||||
Sbjct: 78501 gaagccgacggcgacgccga 78482
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>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0703B01
          Length = 137445

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  gaagccgacggcgacgccga 243
            ||||||||||||||||||||
Sbjct: 9483 gaagccgacggcgacgccga 9464



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  gaagccgacggcgacgccga 243
            ||||||||||||||||||||
Sbjct: 3778 gaagccgacggcgacgccga 3759
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>dbj|AK068280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136H14, full
           insert sequence
          Length = 1842

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 gaagccgacggcgacgccga 243
           ||||||||||||||||||||
Sbjct: 526 gaagccgacggcgacgccga 507
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>dbj|AK062463.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-D11, full
           insert sequence
          Length = 625

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 217 gcagcacgaagccgacggcgacgc 240
           ||||||||| ||||||||||||||
Sbjct: 254 gcagcacgacgccgacggcgacgc 231
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>emb|BX510324.7| Zebrafish DNA sequence from clone DKEY-18C8 in linkage group 20, complete
              sequence
          Length = 164369

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     tacaaaaccaaatgtaaaaa 67
              ||||||||||||||||||||
Sbjct: 158637 tacaaaaccaaatgtaaaaa 158618
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>emb|AL672107.5| Zebrafish DNA sequence from clone BUSM1-84N18 in linkage group 1
             Contains a novel lambda recombinase like pseudogene, a
             putative novel gene and two CpG islands, complete sequence
          Length = 106684

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    tacaaaaccaaatgtaaaaa 67
             ||||||||||||||||||||
Sbjct: 57696 tacaaaaccaaatgtaaaaa 57715
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 300     cactgcgcgccgaacgtgccgccg 323
               ||||||||||||||||| ||||||
Sbjct: 2083863 cactgcgcgccgaacgtcccgccg 2083886
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 229     cgacggcgacgccgacgagc 248
               ||||||||||||||||||||
Sbjct: 2526202 cgacggcgacgccgacgagc 2526183
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>emb|AL844192.12| Zebrafish DNA sequence from clone DKEY-245I2, complete sequence
          Length = 219054

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     tacaaaaccaaatgtaaaaa 67
              ||||||||||||||||||||
Sbjct: 111414 tacaaaaccaaatgtaaaaa 111433
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>emb|AL772220.7| Mouse DNA sequence from clone RP23-409N18 on chromosome 4, complete
              sequence
          Length = 176159

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     acaaaaccaaatgtaaaaat 68
              ||||||||||||||||||||
Sbjct: 164421 acaaaaccaaatgtaaaaat 164402


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,268,644
Number of Sequences: 3902068
Number of extensions: 3268644
Number of successful extensions: 70068
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68644
Number of HSP's gapped (non-prelim): 1418
length of query: 429
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 407
effective length of database: 17,147,199,772
effective search space: 6978910307204
effective search space used: 6978910307204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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