ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal40l22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_531768.2| PREDICTED: Canis familiaris similar to RAN-bind... 44 0.075
2emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on ch... 42 0.30
3gb|AC146704.8| Medicago truncatula clone mth2-107f11, complete s... 40 1.2
4emb|AL583861.9| Human DNA sequence from clone RP11-314E19 on chr... 40 1.2
5emb|AL669816.3| Mouse DNA sequence from clone RP23-266C4 on chro... 40 1.2
6gb|AC097110.1| Homo sapiens BAC clone RP11-51P8 from 4, complete... 40 1.2
7gb|AC159422.1| Trypanosoma brucei chromosome 5 clone RPCI93-26C7... 38 4.6
8gb|AC159419.1| Trypanosoma brucei chromosome 5 clone RPCI93-25P1... 38 4.6
9gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 38 4.6
10gb|AC159453.1| Trypanosoma brucei chromosome 5 clone RPCI93-5M21... 38 4.6
11gb|AY521256.1| Aleuroplatus sp. PB-2004 cytochrome b (CYTB) gene... 38 4.6
12gb|AC124027.2| Mus musculus chromosome X clone RP21-282L18 map q... 38 4.6
13gb|AC124026.2| Mus musculus chromosome X clone RP21-564N13 map q... 38 4.6
14gb|AC124020.2| Mus musculus chromosome X clone RP21-564N13 map q... 38 4.6
15gb|AC125160.3| Mus musculus BAC clone RP24-409P4 from chromosome... 38 4.6
16gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 38 4.6
17gb|AY813060.1| Schistosoma japonicum SJCHGC01385 protein mRNA, c... 38 4.6
18gb|AC134786.6| Mus musculus chromosome 15, clone RP24-502A14, co... 38 4.6
19gb|AC120383.7| Mus musculus chromosome 12, clone RP24-273A7, com... 38 4.6
20gb|AY303241.1| Shuttle vector pMSP3535-RT, complete sequence 38 4.6
21gb|AY303240.1| Shuttle vector pMSP3535-FT, complete sequence 38 4.6
22gb|AY303239.1| Cloning vector pMSP3535, complete sequence 38 4.6
23gb|AY303237.1| Shuttle vector pLEIItd+KR''deltaORF, complete seq... 38 4.6
24gb|AY303236.1| Shuttle vector pLEIItd+KR'', complete sequence 38 4.6
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 4.6
26gb|AC131178.11| Mus musculus chromosome 15, clone RP23-376I10, c... 38 4.6
27gb|AC101542.19| Mus musculus chromosome 19, clone RP23-456B17, c... 38 4.6
28ref|XM_823013.1| Trypanosoma brucei TREU927 variant surface glyc... 38 4.6
29ref|XM_818952.1| Trypanosoma brucei TREU927 clone RPCI93-26C7 va... 38 4.6
30ref|XM_824697.1| Trypanosoma brucei TREU927 variant surface glyc... 38 4.6
31ref|XM_824672.1| Trypanosoma brucei TREU927 variant surface glyc... 38 4.6
32emb|AJ748296.1| Sulfolobus islandicus rudivirus 1 variant XX, co... 38 4.6
33emb|AJ703805.1| Sulfolobus islandicus rod-shaped virus 1 partial... 38 4.6
34gb|AC104920.10| Mus musculus chromosome 10, clone RP23-360H23, c... 38 4.6
35gb|AC098887.4| Mus musculus BAC clone RP23-122N6 from 10, comple... 38 4.6
36gb|AY223321.1| Schistosoma japonicum clone ZZD643 mRNA sequence 38 4.6
37gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, com... 38 4.6
38ref|XM_660521.1| Cryptosporidium hominis TU502 hypothetical prot... 38 4.6
39gb|AY172983.1| Streptococcus viridans strain 1174/97 AtpC, AtpA,... 38 4.6
40gb|AY172982.1| Streptococcus viridans strain 1162/99 AtpC, AtpA,... 38 4.6
41gb|AC146747.7| Medicago truncatula clone mth2-14h5, complete seq... 38 4.6
42gb|U97192.2| Caenorhabditis elegans cosmid C01F4, complete sequence 38 4.6
43emb|AL157366.12| Human DNA sequence from clone RP11-467D10 on ch... 38 4.6
44gb|AC105357.7| Homo sapiens chromosome 11, clone RP11-321F11, co... 38 4.6
45emb|AL138815.6| Human DNA sequence from clone RP11-141F12 on chr... 38 4.6
46gb|AC024073.7| Homo sapiens chromosome 10 clone RP11-394D15, com... 38 4.6
47emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4,... 38 4.6
48gb|AC040166.6| Homo sapiens chromosome 16 clone RP11-44I4, compl... 38 4.6
49dbj|AK016621.1| Mus musculus adult male testis cDNA, RIKEN full-... 38 4.6
50gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H... 38 4.6
51dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
52dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.6
53gb|AC154323.3| Mus musculus BAC clone RP23-307K19 from chromosom... 38 4.6
54gb|AC004255.1|AC004255 Arabidopsis thaliana BAC T1F9 chromosome ... 38 4.6
55emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chr... 38 4.6
56gb|AC154407.2| Mus musculus BAC clone RP24-257B4 from 14, comple... 38 4.6
57gb|AF466203.1| Zea mays clone ZMBBb_0092E12, partial sequence 38 4.6
58emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in ... 38 4.6
59emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in... 38 4.6
60gb|AY814276.1| Schistosoma japonicum clone SJCHGC01386 unknown mRNA 38 4.6
61gb|AC115959.17| Mus musculus chromosome 1, clone RP24-65D16, com... 38 4.6
62emb|CR940305.16| M.truncatula DNA sequence from clone MTH2-28N4 ... 38 4.6
63gb|AC117796.12| Mus musculus chromosome 1, clone RP24-554P6, com... 38 4.6
64gb|AC151602.4| Mus musculus BAC clone RP23-218K15 from chromosom... 38 4.6
65gb|AC161198.5| Mus musculus chromosome 15, clone RP23-34E23, com... 38 4.6
66gb|AF007787.1|AF007787 Enterococcus faecalis plasmid pAM-beta-1 ... 38 4.6
67gb|AC108825.15| Mus musculus chromosome 19, clone RP23-103N22, c... 38 4.6
68gb|AF038666.1|AF038666 Cloning vector pFUN, complete sequence 38 4.6
69emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 ... 38 4.6
70gb|AC145974.4| Gallus gallus BAC clone CH261-3L16 from chromosom... 38 4.6
71gb|AF041239.1| Cloning vector pIL253 replication protein D (repD... 38 4.6
72gb|AF039139.1|AF039139 Cloning vector pIL252 replication protein... 38 4.6
73gb|U82320.1|HSU82320 Homo sapiens unknown protein mRNA, partial cds 38 4.6
74gb|AC166113.3| Mus musculus BAC clone RP23-23E6 from chromosome ... 38 4.6
75emb|AL808110.7| Mouse DNA sequence from clone RP23-62O13 on chro... 38 4.6
76emb|AL671871.4| Mouse DNA sequence from clone RP23-157M14 on chr... 38 4.6
77gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome... 38 4.6 
>ref|XM_531768.2| PREDICTED: Canis familiaris similar to RAN-binding protein 2-like 1
            isoform 1 (LOC474539), mRNA
          Length = 6708

 Score = 44.1 bits (22), Expect = 0.075
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 15   aagctaacagataatgaaaaag 36
            ||||||||||||||||||||||
Sbjct: 5173 aagctaacagataatgaaaaag 5194
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>emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on chromosome 11 Contains two
              novel genes, the 3' end of the Meis1 gene for myeloid
              ecotropic viral integration site 1 and two CpG islands,
              complete sequence
          Length = 190198

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 29     tgaaaaagcaaaccaagaaaa 49
              |||||||||||||||||||||
Sbjct: 168078 tgaaaaagcaaaccaagaaaa 168098
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>gb|AC146704.8| Medicago truncatula clone mth2-107f11, complete sequence
          Length = 116591

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    gaaaaagcaaaccaagaaaa 49
             ||||||||||||||||||||
Sbjct: 58425 gaaaaagcaaaccaagaaaa 58406
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>emb|AL583861.9| Human DNA sequence from clone RP11-314E19 on chromosome 6, complete
             sequence
          Length = 72356

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    aaggtgaaagccaggctttg 70
             ||||||||||||||||||||
Sbjct: 53347 aaggtgaaagccaggctttg 53328
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>emb|AL669816.3| Mouse DNA sequence from clone RP23-266C4 on chromosome 11 Contains the 3'
              end of a novel gene, complete sequence
          Length = 203827

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     acagataatgaaaaagcaaa 40
              ||||||||||||||||||||
Sbjct: 121188 acagataatgaaaaagcaaa 121169
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>gb|AC097110.1| Homo sapiens BAC clone RP11-51P8 from 4, complete sequence
          Length = 153480

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    tgaaaaagcaaaccaagaaaacaa 52
             ||||||| ||||||||||||||||
Sbjct: 91182 tgaaaaaacaaaccaagaaaacaa 91205
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>gb|AC159422.1| Trypanosoma brucei chromosome 5 clone RPCI93-26C7, complete sequence
          Length = 144928

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     gaaaaagcaaaccaagaaa 48
              |||||||||||||||||||
Sbjct: 143070 gaaaaagcaaaccaagaaa 143052
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>gb|AC159419.1| Trypanosoma brucei chromosome 5 clone RPCI93-25P15, complete sequence
          Length = 130539

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    gaaaaagcaaaccaagaaa 48
             |||||||||||||||||||
Sbjct: 91346 gaaaaagcaaaccaagaaa 91328



 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    gaaaaagcaaaccaagaaa 48
             |||||||||||||||||||
Sbjct: 44948 gaaaaagcaaaccaagaaa 44930
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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 30      gaaaaagcaaaccaagaaa 48
               |||||||||||||||||||
Sbjct: 1503068 gaaaaagcaaaccaagaaa 1503050



 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 30      gaaaaagcaaaccaagaaa 48
               |||||||||||||||||||
Sbjct: 1456670 gaaaaagcaaaccaagaaa 1456652
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>gb|AC159453.1| Trypanosoma brucei chromosome 5 clone RPCI93-5M21, complete
           sequence
          Length = 106046

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 30  gaaaaagcaaaccaagaaa 48
           |||||||||||||||||||
Sbjct: 916 gaaaaagcaaaccaagaaa 898
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>gb|AY521256.1| Aleuroplatus sp. PB-2004 cytochrome b (CYTB) gene, partial cds;
           NADH dehydrogenase subunit 1 (ND1) gene, complete cds;
           tRNA-Leu, large subunit ribosomal RNA, small subunit
           ribosomal RNA, and tRNA-Gln genes, complete sequence;
           NADH dehydrogenase subunit 3 (ND3) gene, complete cds;
           tRNA-Gly gene, complete sequence; and cytochrome oxidase
           subunit III (COIII) gene, partial cds; mitochondrial
          Length = 4540

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 22  cagataatgaaaaagcaaaccaagaaa 48
           ||||||| |||||||||||| ||||||
Sbjct: 884 cagataaagaaaaagcaaactaagaaa 910
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>gb|AC124027.2| Mus musculus chromosome X clone RP21-282L18 map qA7.2, complete
             sequence
          Length = 147432

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    agataatgaaaaagcaaac 41
             |||||||||||||||||||
Sbjct: 87757 agataatgaaaaagcaaac 87775
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>gb|AC124026.2| Mus musculus chromosome X clone RP21-564N13 map qA7.2, complete
             sequence
          Length = 178239

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    agataatgaaaaagcaaac 41
             |||||||||||||||||||
Sbjct: 61127 agataatgaaaaagcaaac 61145
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>gb|AC124020.2| Mus musculus chromosome X clone RP21-564N13 map qA7.2, complete
             sequence
          Length = 155466

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    agataatgaaaaagcaaac 41
             |||||||||||||||||||
Sbjct: 53183 agataatgaaaaagcaaac 53201
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>gb|AC125160.3| Mus musculus BAC clone RP24-409P4 from chromosome 7, complete sequence
          Length = 178643

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 30     gaaaaagcaaaccaagaaaacaa 52
              ||||||||||||||| |||||||
Sbjct: 133902 gaaaaagcaaaccaacaaaacaa 133924
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 54     gtgaaagccaggctttgca 72
              |||||||||||||||||||
Sbjct: 696202 gtgaaagccaggctttgca 696220
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>gb|AY813060.1| Schistosoma japonicum SJCHGC01385 protein mRNA, complete cds
          Length = 822

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 32  aaaagcaaaccaagaaaac 50
           |||||||||||||||||||
Sbjct: 485 aaaagcaaaccaagaaaac 467
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>gb|AC134786.6| Mus musculus chromosome 15, clone RP24-502A14, complete sequence
          Length = 179157

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 30     gaaaaagcaaaccaagaaaacaa 52
              ||||||| |||||||||||||||
Sbjct: 167260 gaaaaagaaaaccaagaaaacaa 167238
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>gb|AC120383.7| Mus musculus chromosome 12, clone RP24-273A7, complete sequence
          Length = 216796

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 29    tgaaaaagcaaaccaagaaaaca 51
             ||||||||||||||| |||||||
Sbjct: 41411 tgaaaaagcaaaccatgaaaaca 41433
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>gb|AY303241.1| Shuttle vector pMSP3535-RT, complete sequence
          Length = 8588

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 27   aatgaaaaagcaaaccaag 45
            |||||||||||||||||||
Sbjct: 2319 aatgaaaaagcaaaccaag 2337
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>gb|AY303240.1| Shuttle vector pMSP3535-FT, complete sequence
          Length = 8588

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 27   aatgaaaaagcaaaccaag 45
            |||||||||||||||||||
Sbjct: 2319 aatgaaaaagcaaaccaag 2337
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>gb|AY303239.1| Cloning vector pMSP3535, complete sequence
          Length = 8353

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 27   aatgaaaaagcaaaccaag 45
            |||||||||||||||||||
Sbjct: 2319 aatgaaaaagcaaaccaag 2337
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>gb|AY303237.1| Shuttle vector pLEIItd+KR''deltaORF, complete sequence
          Length = 11925

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 27   aatgaaaaagcaaaccaag 45
            |||||||||||||||||||
Sbjct: 6725 aatgaaaaagcaaaccaag 6707
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>gb|AY303236.1| Shuttle vector pLEIItd+KR'', complete sequence
          Length = 13515

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 27   aatgaaaaagcaaaccaag 45
            |||||||||||||||||||
Sbjct: 8315 aatgaaaaagcaaaccaag 8297
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 53      ggtgaaagccaggctttgc 71
               |||||||||||||||||||
Sbjct: 4685027 ggtgaaagccaggctttgc 4685009
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>gb|AC131178.11| Mus musculus chromosome 15, clone RP23-376I10, complete sequence
          Length = 170753

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 30    gaaaaagcaaaccaagaaaacaa 52
             ||||||| |||||||||||||||
Sbjct: 21071 gaaaaagaaaaccaagaaaacaa 21093
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>gb|AC101542.19| Mus musculus chromosome 19, clone RP23-456B17, complete sequence
          Length = 165781

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 45    gaaaacaaggtgaaagcca 63
             |||||||||||||||||||
Sbjct: 28042 gaaaacaaggtgaaagcca 28060
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>ref|XM_823013.1| Trypanosoma brucei TREU927 variant surface glycoprotein
            (Tb11.51.0005) partial mRNA
          Length = 1437

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 30   gaaaaagcaaaccaagaaa 48
            |||||||||||||||||||
Sbjct: 1318 gaaaaagcaaaccaagaaa 1336
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>ref|XM_818952.1| Trypanosoma brucei TREU927 clone RPCI93-26C7 variant surface
            glycoprotein (Tb927.5.4840) partial mRNA
          Length = 1458

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 30   gaaaaagcaaaccaagaaa 48
            |||||||||||||||||||
Sbjct: 1312 gaaaaagcaaaccaagaaa 1330
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>ref|XM_824697.1| Trypanosoma brucei TREU927 variant surface glycoprotein
            (Tb11.v4.0035) partial mRNA
          Length = 1407

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 30   gaaaaagcaaaccaagaaa 48
            |||||||||||||||||||
Sbjct: 1330 gaaaaagcaaaccaagaaa 1348
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>ref|XM_824672.1| Trypanosoma brucei TREU927 variant surface glycoprotein
            (Tb11.21.0004) partial mRNA
          Length = 1425

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 30   gaaaaagcaaaccaagaaa 48
            |||||||||||||||||||
Sbjct: 1312 gaaaaagcaaaccaagaaa 1330
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>emb|AJ748296.1| Sulfolobus islandicus rudivirus 1 variant XX, complete genome
          Length = 33641

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    taacagataatgaaaaagc 37
             |||||||||||||||||||
Sbjct: 30107 taacagataatgaaaaagc 30089
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>emb|AJ703805.1| Sulfolobus islandicus rod-shaped virus 1 partial ORF51, ORF96, ORF73,
            ORF98, ORF249, ORF100, ORF95 and ORF94
          Length = 3714

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 19   taacagataatgaaaaagc 37
            |||||||||||||||||||
Sbjct: 996  taacagataatgaaaaagc 1014
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>gb|AC104920.10| Mus musculus chromosome 10, clone RP23-360H23, complete sequence
          Length = 212273

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 33     aaagcaaaccaagaaaaca 51
              |||||||||||||||||||
Sbjct: 180068 aaagcaaaccaagaaaaca 180086
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>gb|AC098887.4| Mus musculus BAC clone RP23-122N6 from 10, complete sequence
          Length = 211397

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 33     aaagcaaaccaagaaaaca 51
              |||||||||||||||||||
Sbjct: 188759 aaagcaaaccaagaaaaca 188741
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>gb|AY223321.1| Schistosoma japonicum clone ZZD643 mRNA sequence
          Length = 666

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 32  aaaagcaaaccaagaaaac 50
           |||||||||||||||||||
Sbjct: 308 aaaagcaaaccaagaaaac 290
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>gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, complete sequence
          Length = 193170

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 29    tgaaaaagcaaaccaagaaaaca 51
             ||||||||||||||| |||||||
Sbjct: 12833 tgaaaaagcaaaccatgaaaaca 12811
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>ref|XM_660521.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.40104)
            partial mRNA
          Length = 2463

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 16   agctaacagataatgaaaa 34
            |||||||||||||||||||
Sbjct: 1352 agctaacagataatgaaaa 1370
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>gb|AY172983.1| Streptococcus viridans strain 1174/97 AtpC, AtpA, and AtpB genes,
            complete cds
          Length = 1458

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 30   gaaaaagcaaaccaagaaa 48
            |||||||||||||||||||
Sbjct: 1285 gaaaaagcaaaccaagaaa 1303
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>gb|AY172982.1| Streptococcus viridans strain 1162/99 AtpC, AtpA, and AtpB genes,
            complete cds
          Length = 1460

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 30   gaaaaagcaaaccaagaaa 48
            |||||||||||||||||||
Sbjct: 1287 gaaaaagcaaaccaagaaa 1305
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>gb|AC146747.7| Medicago truncatula clone mth2-14h5, complete sequence
          Length = 129204

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 28    atgaaaaagcaaaccaagaaaacaaggtgaa 58
             |||||||| |||| | |||||||||||||||
Sbjct: 56380 atgaaaaatcaaatctagaaaacaaggtgaa 56410
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>gb|U97192.2| Caenorhabditis elegans cosmid C01F4, complete sequence
          Length = 17773

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 27    aatgaaaaagcaaaccaagaaaacaag 53
             |||| ||||||||| ||||||||||||
Sbjct: 11484 aatggaaaagcaaaacaagaaaacaag 11458
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>emb|AL157366.12| Human DNA sequence from clone RP11-467D10 on chromosome 13 Contains
             part of the ATP8A2 gene for ATPase, aminophospholipid
             transporter-like, Class I, type 8A, member 2 (ML-1 protein
             (IB, ATP, ML-1, ATPIB, DKFZP434B1913)) and a novel
             pseudogene, complete sequence
          Length = 37433

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 31    aaaaagcaaaccaagaaaa 49
             |||||||||||||||||||
Sbjct: 37352 aaaaagcaaaccaagaaaa 37370
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>gb|AC105357.7| Homo sapiens chromosome 11, clone RP11-321F11, complete sequence
          Length = 167772

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    taatgaaaaagcaaaccaa 44
             |||||||||||||||||||
Sbjct: 58389 taatgaaaaagcaaaccaa 58407
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>emb|AL138815.6| Human DNA sequence from clone RP11-141F12 on chromosome 13 Contains part
              of the ATP8A2 gene for ATPase, aminophospholipid
              transporter-like, Class I, type 8A, member 2 (ML-1 protein
              (IB, ATP, ML-1, ATPIB, DKFZP434B1913)), a novel pseudogene
              and a CpG island, complete sequence
          Length = 160210

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 31     aaaaagcaaaccaagaaaa 49
              |||||||||||||||||||
Sbjct: 158292 aaaaagcaaaccaagaaaa 158274
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>gb|AC024073.7| Homo sapiens chromosome 10 clone RP11-394D15, complete sequence
          Length = 172892

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 25     ataatgaaaaagcaaaccaagaa 47
              ||||| |||||||||||||||||
Sbjct: 104052 ataatcaaaaagcaaaccaagaa 104030
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>emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065J09,
             complete sequence
          Length = 117443

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    aagcaaaccaagaaaacaa 52
             |||||||||||||||||||
Sbjct: 33991 aagcaaaccaagaaaacaa 34009
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>gb|AC040166.6| Homo sapiens chromosome 16 clone RP11-44I4, complete sequence
          Length = 136356

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    acagataatgaaaaagcaa 39
             |||||||||||||||||||
Sbjct: 26566 acagataatgaaaaagcaa 26584
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>dbj|AK016621.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4933402J15 product:unclassifiable, full
           insert sequence
          Length = 1671

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  aaagccaggctttgcaaag 75
           |||||||||||||||||||
Sbjct: 697 aaagccaggctttgcaaag 715
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>gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H23, complete sequence
          Length = 159611

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     acagataatgaaaaagcaa 39
              |||||||||||||||||||
Sbjct: 150679 acagataatgaaaaagcaa 150697
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 34       aagcaaaccaagaaaacaa 52
                |||||||||||||||||||
Sbjct: 26146806 aagcaaaccaagaaaacaa 26146824
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 53      ggtgaaagccaggctttgc 71
               |||||||||||||||||||
Sbjct: 4685142 ggtgaaagccaggctttgc 4685124
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>gb|AC154323.3| Mus musculus BAC clone RP23-307K19 from chromosome 14, complete
            sequence
          Length = 191902

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 57   aaagccaggctttgcaaag 75
            |||||||||||||||||||
Sbjct: 6088 aaagccaggctttgcaaag 6070
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>gb|AC004255.1|AC004255 Arabidopsis thaliana BAC T1F9 chromosome 1, complete sequence
          Length = 97789

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 30   gaaaaagcaaaccaagaaaacaa 52
            ||||||| |||||||||||||||
Sbjct: 7985 gaaaaagtaaaccaagaaaacaa 7963
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>emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chromosome 12, complete
            sequence
          Length = 219072

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 29   tgaaaaagcaaaccaagaaaaca 51
            ||||||||||||||| |||||||
Sbjct: 7613 tgaaaaagcaaaccatgaaaaca 7591
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>gb|AC154407.2| Mus musculus BAC clone RP24-257B4 from 14, complete sequence
          Length = 158436

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    aaagccaggctttgcaaag 75
             |||||||||||||||||||
Sbjct: 46519 aaagccaggctttgcaaag 46537
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>gb|AF466203.1| Zea mays clone ZMBBb_0092E12, partial sequence
          Length = 147198

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 68    ttgcaaagtagatcaaaaa 86
             |||||||||||||||||||
Sbjct: 39388 ttgcaaagtagatcaaaaa 39406
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>emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in linkage group 4,
             complete sequence
          Length = 127818

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 19    taacagataatgaaaaagcaaac 41
             |||||||||||||||| ||||||
Sbjct: 36247 taacagataatgaaaaggcaaac 36225
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>emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in linkage group 22,
             complete sequence
          Length = 209223

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    atgaagctaacagataatg 30
             |||||||||||||||||||
Sbjct: 52455 atgaagctaacagataatg 52437
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>gb|AY814276.1| Schistosoma japonicum clone SJCHGC01386 unknown mRNA
          Length = 659

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 32  aaaagcaaaccaagaaaac 50
           |||||||||||||||||||
Sbjct: 304 aaaagcaaaccaagaaaac 286
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>gb|AC115959.17| Mus musculus chromosome 1, clone RP24-65D16, complete sequence
          Length = 187431

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    aaagcaaaccaagaaaaca 51
             |||||||||||||||||||
Sbjct: 20431 aaagcaaaccaagaaaaca 20413
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>emb|CR940305.16| M.truncatula DNA sequence from clone MTH2-28N4 on chromosome 3,
             complete sequence
          Length = 134589

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 31    aaaaagcaaaccaagaaaacaag 53
             ||||||||||| |||||||||||
Sbjct: 19805 aaaaagcaaactaagaaaacaag 19783
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>gb|AC117796.12| Mus musculus chromosome 1, clone RP24-554P6, complete sequence
          Length = 109851

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    aaagcaaaccaagaaaaca 51
             |||||||||||||||||||
Sbjct: 40452 aaagcaaaccaagaaaaca 40470
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>gb|AC151602.4| Mus musculus BAC clone RP23-218K15 from chromosome 7, complete sequence
          Length = 249504

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 47     aaacaaggtgaaagccagg 65
              |||||||||||||||||||
Sbjct: 137121 aaacaaggtgaaagccagg 137103
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>gb|AC161198.5| Mus musculus chromosome 15, clone RP23-34E23, complete sequence
          Length = 237801

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 45     gaaaacaaggtgaaagcca 63
              |||||||||||||||||||
Sbjct: 126633 gaaaacaaggtgaaagcca 126651
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>gb|AF007787.1|AF007787 Enterococcus faecalis plasmid pAM-beta-1 copy number repressor
            (copF),  RepE (repE), resolvase (res beta), and type I
            topoisomerase (top beta) genes, complete cds and unknown
            genes
          Length = 8199

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 27   aatgaaaaagcaaaccaag 45
            |||||||||||||||||||
Sbjct: 3045 aatgaaaaagcaaaccaag 3063
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>gb|AC108825.15| Mus musculus chromosome 19, clone RP23-103N22, complete sequence
          Length = 202768

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 45     gaaaacaaggtgaaagcca 63
              |||||||||||||||||||
Sbjct: 139612 gaaaacaaggtgaaagcca 139594
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>gb|AF038666.1|AF038666 Cloning vector pFUN, complete sequence
          Length = 8072

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 27   aatgaaaaagcaaaccaag 45
            |||||||||||||||||||
Sbjct: 2526 aatgaaaaagcaaaccaag 2544
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>emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 on chromosome 11p13, complete
             sequence
          Length = 111590

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    aaagcaaaccaagaaaacaaggt 55
             |||||||| ||||||||||||||
Sbjct: 92025 aaagcaaaacaagaaaacaaggt 92047
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>gb|AC145974.4| Gallus gallus BAC clone CH261-3L16 from chromosome unknown, complete
            sequence
          Length = 201188

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 31   aaaaagcaaaccaagaaaa 49
            |||||||||||||||||||
Sbjct: 3851 aaaaagcaaaccaagaaaa 3869
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>gb|AF041239.1| Cloning vector pIL253 replication protein D (repD), replication
           protein E (repE), and adenine methylase (ermAM) genes,
           complete cds and complete sequence
          Length = 4963

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 27  aatgaaaaagcaaaccaag 45
           |||||||||||||||||||
Sbjct: 767 aatgaaaaagcaaaccaag 785
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>gb|AF039139.1|AF039139 Cloning vector pIL252 replication protein D (repD), replication
           protein E (repE), and adenine methylase (ermAM) genes,
           complete cds
          Length = 4698

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 27  aatgaaaaagcaaaccaag 45
           |||||||||||||||||||
Sbjct: 767 aatgaaaaagcaaaccaag 785
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>gb|U82320.1|HSU82320 Homo sapiens unknown protein mRNA, partial cds
          Length = 1075

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 31  aaaaagcaaaccaagaaaa 49
           |||||||||||||||||||
Sbjct: 294 aaaaagcaaaccaagaaaa 276
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>gb|AC166113.3| Mus musculus BAC clone RP23-23E6 from chromosome 14, complete sequence
          Length = 252394

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    caagaaaacaaggtgaaag 60
             |||||||||||||||||||
Sbjct: 42511 caagaaaacaaggtgaaag 42529
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>emb|AL808110.7| Mouse DNA sequence from clone RP23-62O13 on chromosome X, complete
             sequence
          Length = 175963

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    agataatgaaaaagcaaac 41
             |||||||||||||||||||
Sbjct: 31059 agataatgaaaaagcaaac 31077
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>emb|AL671871.4| Mouse DNA sequence from clone RP23-157M14 on chromosome 4, complete
              sequence
          Length = 199593

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 26     taatgaaaaagcaaaccaagaaaacaa 52
              |||||||||||||||| || |||||||
Sbjct: 125961 taatgaaaaagcaaacaaacaaaacaa 125935
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>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09,
              complete sequence
          Length = 148894

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 53     ggtgaaagccaggctttgc 71
              |||||||||||||||||||
Sbjct: 125982 ggtgaaagccaggctttgc 125964


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,227,589
Number of Sequences: 3902068
Number of extensions: 1227589
Number of successful extensions: 96495
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96262
Number of HSP's gapped (non-prelim): 233
length of query: 104
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 83
effective length of database: 17,151,101,840
effective search space: 1423541452720
effective search space used: 1423541452720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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