ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal40l21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 242 bits (122), Expect = 1e-60 Identities = 337/406 (83%), Gaps = 2/406 (0%) Strand = Plus / Minus Query: 172 gagcaggcagtaggtggcgccggcgacgaagaaactgacgaaccaggcgttgtcataggc 231 ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| ||||| Sbjct: 27097391 gagcaggcagtagacggcgccggcgacgaaaaaactgacgaaccaagcgttgttgtaggc 27097332 Query: 232 cacgacgagtgccttggacattgtcggcagcacaccgaccttgtgcaagaaccccggcac 291 | | ||||||||| | |||| || || || || ||||||| ||| |||||||| Sbjct: 27097331 tgtctcaaatgccttggagacgctcggtagaactccaacattgtgcaggaatcccggcac 27097272 Query: 292 ga-cggcggcgaatcctgccgccatcgccaccatcgcagcaacgttgaagccgccctgga 350 || ||||| | | ||| |||||||||||| |||| || || |||||||| |||||||||| Sbjct: 27097271 gatcggcg-caactccggccgccatcgccgccatggcggcgacgttgaaaccgccctgga 27097213 Query: 351 agtagtaggggctgtcgtcttcctccgagtaaagcgcgtcgacgtccaacgcagtacgcc 410 | ||||| || | || | ||||||||||| |||||||||||||||| ||| || |||| Sbjct: 27097212 aatagtaaggcccgtggctgtcctccgagtagagcgcgtcgacgtccagcgcggttcgcc 27097153 Query: 411 gcactatatagtgatccgcgagcacgatgcctccgataggccccatgagcgccgcgtttc 470 | || || ||||| || ||||| | ||| |||||||| || |||||||| |||| || | Sbjct: 27097152 ggacgatgtagtggtcggcgaggatgatccctccgatcgggcccatgagagccgagtagc 27097093 Query: 471 cgagcagccaggtgaagacgaagctctcgctggagctgagcagccgccacggctgcaagg 530 |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 27097092 cgagcagccatgtgtagacgaagctctcgctggagctgagcagccgccatggctggaagg 27097033 Query: 531 cgatgccgagcagcgccgtggcgagcgcacccttggcgaacgtgaa 576 |||||||||||| ||| ||| | ||||| ||||||||||||||||| Sbjct: 27097032 cgatgccgagcaacgcggtgaccagcgcccccttggcgaacgtgaa 27096987 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 604 gttcgccggcgcgacgacgttggcggcgatgttggtggtgatg 646 |||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 27096959 gttcgccggcgccaccacgttggcggcaatgttggtcgtgatg 27096917
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 242 bits (122), Expect = 1e-60 Identities = 337/406 (83%), Gaps = 2/406 (0%) Strand = Plus / Minus Query: 172 gagcaggcagtaggtggcgccggcgacgaagaaactgacgaaccaggcgttgtcataggc 231 ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| ||||| Sbjct: 69040 gagcaggcagtagacggcgccggcgacgaaaaaactgacgaaccaagcgttgttgtaggc 68981 Query: 232 cacgacgagtgccttggacattgtcggcagcacaccgaccttgtgcaagaaccccggcac 291 | | ||||||||| | |||| || || || || ||||||| ||| |||||||| Sbjct: 68980 tgtctcaaatgccttggagacgctcggtagaactccaacattgtgcaggaatcccggcac 68921 Query: 292 ga-cggcggcgaatcctgccgccatcgccaccatcgcagcaacgttgaagccgccctgga 350 || ||||| | | ||| |||||||||||| |||| || || |||||||| |||||||||| Sbjct: 68920 gatcggcg-caactccggccgccatcgccgccatggcggcgacgttgaaaccgccctgga 68862 Query: 351 agtagtaggggctgtcgtcttcctccgagtaaagcgcgtcgacgtccaacgcagtacgcc 410 | ||||| || | || | ||||||||||| |||||||||||||||| ||| || |||| Sbjct: 68861 aatagtaaggcccgtggctgtcctccgagtagagcgcgtcgacgtccagcgcggttcgcc 68802 Query: 411 gcactatatagtgatccgcgagcacgatgcctccgataggccccatgagcgccgcgtttc 470 | || || ||||| || ||||| | ||| |||||||| || |||||||| |||| || | Sbjct: 68801 ggacgatgtagtggtcggcgaggatgatccctccgatcgggcccatgagagccgagtagc 68742 Query: 471 cgagcagccaggtgaagacgaagctctcgctggagctgagcagccgccacggctgcaagg 530 |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 68741 cgagcagccatgtgtagacgaagctctcgctggagctgagcagccgccatggctggaagg 68682 Query: 531 cgatgccgagcagcgccgtggcgagcgcacccttggcgaacgtgaa 576 |||||||||||| ||| ||| | ||||| ||||||||||||||||| Sbjct: 68681 cgatgccgagcaacgcggtgaccagcgcccccttggcgaacgtgaa 68636 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 604 gttcgccggcgcgacgacgttggcggcgatgttggtggtgatg 646 |||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 68608 gttcgccggcgccaccacgttggcggcaatgttggtcgtgatg 68566
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 242 bits (122), Expect = 1e-60 Identities = 337/406 (83%), Gaps = 2/406 (0%) Strand = Plus / Minus Query: 172 gagcaggcagtaggtggcgccggcgacgaagaaactgacgaaccaggcgttgtcataggc 231 ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| ||||| Sbjct: 150593 gagcaggcagtagacggcgccggcgacgaaaaaactgacgaaccaagcgttgttgtaggc 150534 Query: 232 cacgacgagtgccttggacattgtcggcagcacaccgaccttgtgcaagaaccccggcac 291 | | ||||||||| | |||| || || || || ||||||| ||| |||||||| Sbjct: 150533 tgtctcaaatgccttggagacgctcggtagaactccaacattgtgcaggaatcccggcac 150474 Query: 292 ga-cggcggcgaatcctgccgccatcgccaccatcgcagcaacgttgaagccgccctgga 350 || ||||| | | ||| |||||||||||| |||| || || |||||||| |||||||||| Sbjct: 150473 gatcggcg-caactccggccgccatcgccgccatggcggcgacgttgaaaccgccctgga 150415 Query: 351 agtagtaggggctgtcgtcttcctccgagtaaagcgcgtcgacgtccaacgcagtacgcc 410 | ||||| || | || | ||||||||||| |||||||||||||||| ||| || |||| Sbjct: 150414 aatagtaaggcccgtggctgtcctccgagtagagcgcgtcgacgtccagcgcggttcgcc 150355 Query: 411 gcactatatagtgatccgcgagcacgatgcctccgataggccccatgagcgccgcgtttc 470 | || || ||||| || ||||| | ||| |||||||| || |||||||| |||| || | Sbjct: 150354 ggacgatgtagtggtcggcgaggatgatccctccgatcgggcccatgagagccgagtagc 150295 Query: 471 cgagcagccaggtgaagacgaagctctcgctggagctgagcagccgccacggctgcaagg 530 |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 150294 cgagcagccatgtgtagacgaagctctcgctggagctgagcagccgccatggctggaagg 150235 Query: 531 cgatgccgagcagcgccgtggcgagcgcacccttggcgaacgtgaa 576 |||||||||||| ||| ||| | ||||| ||||||||||||||||| Sbjct: 150234 cgatgccgagcaacgcggtgaccagcgcccccttggcgaacgtgaa 150189 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 604 gttcgccggcgcgacgacgttggcggcgatgttggtggtgatg 646 |||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 150161 gttcgccggcgccaccacgttggcggcaatgttggtcgtgatg 150119
>dbj|AK106879.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-E09, full insert sequence Length = 1724 Score = 234 bits (118), Expect = 3e-58 Identities = 336/406 (82%), Gaps = 2/406 (0%) Strand = Plus / Minus Query: 172 gagcaggcagtaggtggcgccggcgacgaagaaactgacgaaccaggcgttgtcataggc 231 ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| ||||| Sbjct: 1619 gagcaggcagtagacggcgccggcgacgaaaaaactgacgaaccaagcgttgttgtaggc 1560 Query: 232 cacgacgagtgccttggacattgtcggcagcacaccgaccttgtgcaagaaccccggcac 291 | | ||||||||| | |||| || || || || ||||||| ||| |||||||| Sbjct: 1559 tgtctcaaatgccttggagacgctcggtagaactccaacattgtgcaggaatcccggcac 1500 Query: 292 ga-cggcggcgaatcctgccgccatcgccaccatcgcagcaacgttgaagccgccctgga 350 || ||||| | | ||| |||||||||||| |||| || || |||||||| |||||||||| Sbjct: 1499 gatcggcg-caactccggccgccatcgccgccatggcggcgacgttgaaaccgccctgga 1441 Query: 351 agtagtaggggctgtcgtcttcctccgagtaaagcgcgtcgacgtccaacgcagtacgcc 410 | ||||| || | || | ||||||||||| |||||||||||||||| ||| || |||| Sbjct: 1440 aatagtaaggcccgtggctgtcctccgagtagagcgcgtcgacgtccagcgcggttcgcc 1381 Query: 411 gcactatatagtgatccgcgagcacgatgcctccgataggccccatgagcgccgcgtttc 470 | || || ||||| || ||||| | ||| |||||||| || |||||||| |||| || | Sbjct: 1380 ggacgatgtagtggtcggcgaggatgatccctccgatcgggcccatgagagccgagtagc 1321 Query: 471 cgagcagccaggtgaagacgaagctctcgctggagctgagcagccgccacggctgcaagg 530 |||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||| |||| Sbjct: 1320 cgagcagccatgtgtagacgaagctctcgctggggctgagcagccgccatggctggaagg 1261 Query: 531 cgatgccgagcagcgccgtggcgagcgcacccttggcgaacgtgaa 576 |||||||||||| ||| ||| | ||||| ||||||||||||||||| Sbjct: 1260 cgatgccgagcaacgcggtgaccagcgcccccttggcgaacgtgaa 1215 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 604 gttcgccggcgcgacgacgttggcggcgatgttggtggtgatg 646 |||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 1187 gttcgccggcgccaccacgttggcggcaatgttggtcgtgatg 1145
>ref|NM_186558.1| Oryza sativa (japonica cultivar-group), mRNA Length = 441 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 477 gccaggtgaagacgaagctctcgctggagctgagcagccgccacggctgcaaggcgatgc 536 |||| ||| ||||||||||||||| |||||||||||||||||| ||||| |||||||||| Sbjct: 145 gccatgtgtagacgaagctctcgcaggagctgagcagccgccatggctggaaggcgatgc 86 Query: 537 cgagcagcgccgtggcgagcgcacccttggcgaacgtgaa 576 | |||| ||| ||| | ||||| ||||||||||||||||| Sbjct: 85 caagcaacgcagtgaccagcgcccccttggcgaacgtgaa 46
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 477 gccaggtgaagacgaagctctcgctggagctgagcagccgccacggctgcaaggcgatgc 536 |||| ||| ||||||||||||||| |||||||||||||||||| ||||| |||||||||| Sbjct: 6511549 gccatgtgtagacgaagctctcgcaggagctgagcagccgccatggctggaaggcgatgc 6511608 Query: 537 cgagcagcgccgtggcgagcgcacccttggcgaacgtgaa 576 | |||| ||| ||| | ||||| ||||||||||||||||| Sbjct: 6511609 caagcaacgcagtgaccagcgcccccttggcgaacgtgaa 6511648 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 477 gccaggtgaagacgaagctctcgctggagctgagcagccgccacggctgcaaggcgatgc 536 |||| ||| ||| ||||||||||||||||| || ||||||||| ||||| |||||||||| Sbjct: 24345616 gccatgtgtagatgaagctctcgctggagccgaacagccgccatggctggaaggcgatgc 24345557 Query: 537 cgagcagcgccgtggcgagcgcacccttggcgaacgtgaa 576 |||||| ||| ||| | ||||| |||||||||||||||| Sbjct: 24345556 cgagcaacgcagtgaccagcgccaccttggcgaacgtgaa 24345517
>dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0031C24 Length = 194111 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 477 gccaggtgaagacgaagctctcgctggagctgagcagccgccacggctgcaaggcgatgc 536 |||| ||| ||||||||||||||| |||||||||||||||||| ||||| |||||||||| Sbjct: 23643 gccatgtgtagacgaagctctcgcaggagctgagcagccgccatggctggaaggcgatgc 23702 Query: 537 cgagcagcgccgtggcgagcgcacccttggcgaacgtgaa 576 | |||| ||| ||| | ||||| ||||||||||||||||| Sbjct: 23703 caagcaacgcagtgaccagcgcccccttggcgaacgtgaa 23742
>dbj|AP003805.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1080_F08 Length = 94139 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 477 gccaggtgaagacgaagctctcgctggagctgagcagccgccacggctgcaaggcgatgc 536 |||| ||| ||||||||||||||| |||||||||||||||||| ||||| |||||||||| Sbjct: 68638 gccatgtgtagacgaagctctcgcaggagctgagcagccgccatggctggaaggcgatgc 68697 Query: 537 cgagcagcgccgtggcgagcgcacccttggcgaacgtgaa 576 | |||| ||| ||| | ||||| ||||||||||||||||| Sbjct: 68698 caagcaacgcagtgaccagcgcccccttggcgaacgtgaa 68737
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1579_C03 Length = 122851 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 477 gccaggtgaagacgaagctctcgctggagctgagcagccgccacggctgcaaggcgatgc 536 |||| ||| ||| ||||||||||||||||| || ||||||||| ||||| |||||||||| Sbjct: 78809 gccatgtgtagatgaagctctcgctggagccgaacagccgccatggctggaaggcgatgc 78750 Query: 537 cgagcagcgccgtggcgagcgcacccttggcgaacgtgaa 576 |||||| ||| ||| | ||||| |||||||||||||||| Sbjct: 78749 cgagcaacgcagtgaccagcgccaccttggcgaacgtgaa 78710
>ref|XM_475645.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 624 tggcggcgatgttggtggtgatg 646 ||||||||||||||||||||||| Sbjct: 32 tggcggcgatgttggtggtgatg 54
>gb|AC153974.9| Mus musculus 10 BAC RP24-462I5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162977 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 46 tactgtcttgtttacttatttgt 68 ||||||||||||||||||||||| Sbjct: 101508 tactgtcttgtttacttatttgt 101530
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 624 tggcggcgatgttggtggtgatg 646 ||||||||||||||||||||||| Sbjct: 78749 tggcggcgatgttggtggtgatg 78727
>gb|AC119158.10| Mus musculus chromosome 19, clone RP23-434C14, complete sequence Length = 209459 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 61 ttatttgttttgttagtattgct 83 ||||||||||||||||||||||| Sbjct: 167231 ttatttgttttgttagtattgct 167253
>gb|AC153549.5| Mus musculus 10 BAC RP23-222O23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217249 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 46 tactgtcttgtttacttatttgt 68 ||||||||||||||||||||||| Sbjct: 202438 tactgtcttgtttacttatttgt 202416
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 624 tggcggcgatgttggtggtgatg 646 ||||||||||||||||||||||| Sbjct: 3656402 tggcggcgatgttggtggtgatg 3656380
>dbj|AK105598.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A03, full insert sequence Length = 1114 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 624 tggcggcgatgttggtggtgatg 646 ||||||||||||||||||||||| Sbjct: 95 tggcggcgatgttggtggtgatg 117
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 175 caggcagtaggtggcgccggcga 197 ||||||||||||||||||||||| Sbjct: 2502526 caggcagtaggtggcgccggcga 2502504
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 527 aaggcgatgccgagcagcgccg 548 |||||||||||||||||||||| Sbjct: 3729096 aaggcgatgccgagcagcgccg 3729075
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 526 caaggcgatgccgagcagcgcc 547 |||||||||||||||||||||| Sbjct: 323410 caaggcgatgccgagcagcgcc 323389
>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence Length = 95814 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 624 tggcggcgatgttggtggtgatgatg 649 ||||||||||| |||||||||||||| Sbjct: 91908 tggcggcgatgatggtggtgatgatg 91883
>gb|AC140489.2| Mus musculus BAC clone RP24-144C10 from chromosome 1, complete sequence Length = 194368 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ttgtttacttatttgttttgtt 74 |||||||||||||||||||||| Sbjct: 135285 ttgtttacttatttgttttgtt 135306
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 acgttgaagccgccctggaagt 353 |||||||||||||||||||||| Sbjct: 2647796 acgttgaagccgccctggaagt 2647775
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 529 ggcgatgccgagcagcgccgtggcgagcgc 558 ||||||||||||||||| ||| |||||||| Sbjct: 1897688 ggcgatgccgagcagcgacgtcgcgagcgc 1897717
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 529 ggcgatgccgagcagcgccgtggcgagcg 557 ||||||||||||||||| || |||||||| Sbjct: 1140379 ggcgatgccgagcagcgacgcggcgagcg 1140407
>emb|BX936442.10| Zebrafish DNA sequence from clone DKEY-101D4 in linkage group 21, complete sequence Length = 229721 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 ttgtttacttatttgttttgttagt 77 |||||||||||||||||||| |||| Sbjct: 214082 ttgtttacttatttgttttgctagt 214106
>gb|AF312031.1| Burkholderia vietnamiensis multi-drug efflux transporter (norM) gene, complete cds Length = 1389 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 529 ggcgatgccgagcagcgccgtggcgagcg 557 ||||||||||||||||| || |||||||| Sbjct: 1125 ggcgatgccgagcagcgacgcggcgagcg 1097
>gb|AC018688.9| Homo sapiens BAC clone RP11-462H3 from UL, complete sequence Length = 170204 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 631 gatgttggtggtgatgatggc 651 ||||||||||||||||||||| Sbjct: 24121 gatgttggtggtgatgatggc 24141
>gb|DQ127597.1| Emiliania huxleyi virus 163 clone combi101+81.seq partial sequence Length = 1892 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 614 gcgacgacgttggcggcgatgttggtggtgatg 646 ||||||||| ||||||||||| |||||| |||| Sbjct: 321 gcgacgacggtggcggcgatggtggtggcgatg 353
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5 Length = 349418 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 attaataaatgtatacatattttac 26 ||||||| ||||||||||||||||| Sbjct: 269856 attaatatatgtatacatattttac 269880
>gb|AC093015.5| Homo sapiens 12q BAC RP11-534K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115294 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aataaatgtatacatatttta 25 ||||||||||||||||||||| Sbjct: 50095 aataaatgtatacatatttta 50075
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 aactgacgaaccaggcgttgt 224 ||||||||||||||||||||| Sbjct: 3303965 aactgacgaaccaggcgttgt 3303985
>gb|AC020704.5| Homo sapiens BAC clone RP11-315L6 from 15, complete sequence Length = 191031 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 cttgtttacttatttgttttg 72 ||||||||||||||||||||| Sbjct: 55549 cttgtttacttatttgttttg 55569
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tactgtcttgtttacttattt 66 ||||||||||||||||||||| Sbjct: 26648348 tactgtcttgtttacttattt 26648328 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 cgagcagcgccgtggcgagc 556 |||||||||||||||||||| Sbjct: 10883158 cgagcagcgccgtggcgagc 10883139
>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1047G05 Length = 145431 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tactgtcttgtttacttattt 66 ||||||||||||||||||||| Sbjct: 5811 tactgtcttgtttacttattt 5791
>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0677B10 Length = 134423 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tactgtcttgtttacttattt 66 ||||||||||||||||||||| Sbjct: 64778 tactgtcttgtttacttattt 64758
>emb|CR848742.8| Zebrafish DNA sequence from clone DKEY-181C1 in linkage group 16, complete sequence Length = 177769 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 taataaatgtatacatatttt 24 ||||||||||||||||||||| Sbjct: 115517 taataaatgtatacatatttt 115537
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 529 ggcgatgccgagcagcgccgtggcgagc 556 ||||||||||||||||| ||| |||||| Sbjct: 530069 ggcgatgccgagcagcgacgtcgcgagc 530096
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 534 tgccgagcagcgccgtggcgagcgcacc 561 |||||||||||||| |||||||||||| Sbjct: 2563851 tgccgagcagcgccagggcgagcgcacc 2563878
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 gccgccatcgccaccatcgc 327 |||||||||||||||||||| Sbjct: 110884 gccgccatcgccaccatcgc 110865
>ref|XM_362108.1| Magnaporthe grisea 70-15 predicted protein (MG04553.4) partial cds Length = 696 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 624 tggcggcgatgttggtggtgatgatggc 651 |||||| |||| |||||||||||||||| Sbjct: 639 tggcggtgatgatggtggtgatgatggc 666
>gb|AC116461.13| Mus musculus chromosome 10, clone RP23-463P8, complete sequence Length = 203737 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gtttacttatttgttttgtt 74 |||||||||||||||||||| Sbjct: 35219 gtttacttatttgttttgtt 35238
>ref|XM_959135.1| Neurospora crassa OR74A hypothetical protein (NCU01944.1) partial mRNA Length = 1824 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 tgagcagccgccacggctgcaagg 530 ||||||||||||| |||||||||| Sbjct: 821 tgagcagccgccaaggctgcaagg 798
>ref|XM_329133.1| Neurospora crassa OR74A hypothetical protein (NCU01944.1) partial mRNA Length = 1824 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 tgagcagccgccacggctgcaagg 530 ||||||||||||| |||||||||| Sbjct: 821 tgagcagccgccaaggctgcaagg 798
>gb|AY640177.1| Homo sapiens interleukin 12 receptor, beta 2 (IL12RB2) gene, complete cds Length = 93156 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cttgtttacttatttgtttt 71 |||||||||||||||||||| Sbjct: 14090 cttgtttacttatttgtttt 14071
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 529 ggcgatgccgagcagcgccgtggcgagc 556 ||||||||||||||||| ||| |||||| Sbjct: 3245009 ggcgatgccgagcagcgacgtcgcgagc 3244982
>gb|AC121906.3| Mus musculus BAC clone RP24-176E21 from chromosome 3, complete sequence Length = 171059 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 tcttgtttacttatttgttttgtt 74 |||| ||||||||||||||||||| Sbjct: 135503 tcttctttacttatttgttttgtt 135526
>gb|AY266451.1| Plasmodium falciparum isolate 3D7 COPI protein (Sec27) mRNA, complete cds Length = 3033 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 attaataaatgtatacatat 21 |||||||||||||||||||| Sbjct: 2341 attaataaatgtatacatat 2360
>ref|XM_755836.1| Ustilago maydis 521 hypothetical protein (UM04782.1) partial mRNA Length = 2529 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 631 gatgttggtggtgatgatgg 650 |||||||||||||||||||| Sbjct: 2481 gatgttggtggtgatgatgg 2462
>ref|XM_747832.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g15580) partial mRNA Length = 819 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cgccatcgccaccatcgcag 329 |||||||||||||||||||| Sbjct: 504 cgccatcgccaccatcgcag 485
>gb|AC125374.4| Mus musculus BAC clone RP23-438P19 from chromosome 9, complete sequence Length = 175440 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 taagatgtatggatgtactg 50 |||||||||||||||||||| Sbjct: 117976 taagatgtatggatgtactg 117957
>emb|X61930.1|PFMSAMSA1 P. falciparum gene for major surface antigen (MSA-1) Length = 3395 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aataaatgtatacatatttt 24 |||||||||||||||||||| Sbjct: 31 aataaatgtatacatatttt 50
>gb|AC079316.15| Homo sapiens 12 BAC RP11-43D4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178905 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 gatgttggtggtgatgatgg 650 |||||||||||||||||||| Sbjct: 174665 gatgttggtggtgatgatgg 174684
>emb|CR729658.2|CNS0GPY8 Tetraodon nigroviridis full-length cDNA Length = 1152 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 gccgccatcgccaccatcgc 327 |||||||||||||||||||| Sbjct: 387 gccgccatcgccaccatcgc 368
>gb|AC144713.2| Danio rerio clone CH211-6O1, complete sequence Length = 153992 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 taaatgtatacatattttac 26 |||||||||||||||||||| Sbjct: 109201 taaatgtatacatattttac 109182
>gb|AC104866.10| Mus musculus chromosome 17, clone RP23-268C14, complete sequence Length = 176240 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 attaataaatgtatacatat 21 |||||||||||||||||||| Sbjct: 167646 attaataaatgtatacatat 167627
>emb|AL389925.10| Human DNA sequence from clone RP11-131O15 on chromosome 1 Contains the 3' end of the gene for interleukin-23 receptor (IL23R), a DnaJ (Hsp40) homolog subfamily B member 6 (DNAJB6) pseudogene and the 5' end of the gene for interleukin 12 receptor, beta 2 (IL12RB2), complete sequence Length = 122289 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cttgtttacttatttgtttt 71 |||||||||||||||||||| Sbjct: 72441 cttgtttacttatttgtttt 72422
>emb|AL772392.4| Human DNA sequence from clone RP11-450P7 on chromosome X Contains the 3' end of the CNK2 gene for connector enhancer of KSR2 (KIAA0902), gene FLJ34960, 3' end of the SMPX gene for X-linked small muscle protein and a CpG island, complete sequence Length = 124186 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gtttacttatttgttttgtt 74 |||||||||||||||||||| Sbjct: 38638 gtttacttatttgttttgtt 38657
>emb|Z47726.1|DMDRPB6 D.melanogaster mRNA for RNA polymerase subunit Length = 534 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 cgacgacgttggcggcgatg 634 |||||||||||||||||||| Sbjct: 109 cgacgacgttggcggcgatg 128
>emb|Z35327.1|PFMEZSA1B P.falciparum gp190 (MSA1, MSP1, PMMSA) for precursor of major merozoite surface antigens Length = 5312 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aataaatgtatacatatttt 24 |||||||||||||||||||| Sbjct: 4 aataaatgtatacatatttt 23
>emb|Y10438.1|SPFKBAD Streptomyces sp. MA6548 fkbA gene and partial fkbD gene encoding FK506 polyketide synthase and cytochrome P-450-9-deoxo-FK506 hydroxylase, respectively Length = 19791 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 ggcgatgccgagcagcgccg 548 |||||||||||||||||||| Sbjct: 18975 ggcgatgccgagcagcgccg 18956
>emb|Y00087.1|PFP190G Plasmodium falciparum surface antigen P190 gene fragment Length = 3518 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aataaatgtatacatatttt 24 |||||||||||||||||||| Sbjct: 233 aataaatgtatacatatttt 252
>emb|X05624.2|PFP190G1 Plasmodium falciparum p190 gene for p190 surface antigen precursor Length = 5392 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aataaatgtatacatatttt 24 |||||||||||||||||||| Sbjct: 31 aataaatgtatacatatttt 50
>emb|X03831.1|PFGP195 P.falciparum (CAMP strain) gp195 gene for major merozoite surface antigen Length = 5541 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aataaatgtatacatatttt 24 |||||||||||||||||||| Sbjct: 178 aataaatgtatacatatttt 197
>emb|BX927155.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 8/10 Length = 349136 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 628 ggcgatgttggtggtgatgatggc 651 ||||||||||||||||||| |||| Sbjct: 90916 ggcgatgttggtggtgatgctggc 90939
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 529 ggcgatgccgagcagcgccgtggcgagc 556 ||||||||||||||||| ||| |||||| Sbjct: 2974832 ggcgatgccgagcagcgacgtcgcgagc 2974805
>emb|AL929358.1|PFA929358 Plasmodium falciparum strain 3D7, chromosome 9; segment 4/5 Length = 254050 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aataaatgtatacatatttt 24 |||||||||||||||||||| Sbjct: 195697 aataaatgtatacatatttt 195716
>emb|AL929355.1|PFA929355 Plasmodium falciparum strain 3D7, chromosome 9; segment 1/5 Length = 330050 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 attaataaatgtatacatat 21 |||||||||||||||||||| Sbjct: 294274 attaataaatgtatacatat 294255
>emb|AL646044.13| Mouse DNA sequence from clone RP23-269O5 on chromosome 11, complete sequence Length = 197473 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 attaataaatgtatacatat 21 |||||||||||||||||||| Sbjct: 109008 attaataaatgtatacatat 108989
>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17, complete sequence Length = 153540 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 taataaatgtatacatattttact 27 |||| ||||||||||||||||||| Sbjct: 10105 taattaatgtatacatattttact 10082
>emb|X15063.1|PFGP195A Plasmodium falciparum mRNA for major merozoite surface antigen gp195 Length = 7038 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aataaatgtatacatatttt 24 |||||||||||||||||||| Sbjct: 1487 aataaatgtatacatatttt 1506
>emb|BX649634.8| Zebrafish DNA sequence from clone CH211-284G18 in linkage group 2, complete sequence Length = 154030 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ttttactgtttaagatgtat 40 |||||||||||||||||||| Sbjct: 35531 ttttactgtttaagatgtat 35550
>ref|NM_080171.2| Drosophila melanogaster RNA polymerase II 18kD subunit CG1163-RA (RpII18), mRNA Length = 544 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 cgacgacgttggcggcgatg 634 |||||||||||||||||||| Sbjct: 113 cgacgacgttggcggcgatg 132
>gb|DQ387872.1| Neurospora crassa strain Adiopodoume-1 Srp interval sequence Length = 33499 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 tgagcagccgccacggctgcaagg 530 ||||||||||||| |||||||||| Sbjct: 12201 tgagcagccgccaaggctgcaagg 12178
>gb|AC155709.5| Mus musculus 10 BAC RP24-200F4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176109 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcttgtttacttatttgttt 70 |||||||||||||||||||| Sbjct: 19766 tcttgtttacttatttgttt 19747
>gb|AC154108.3| Mus musculus BAC clone RP23-74K24 from chromosome 7, complete sequence Length = 222515 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ttgtttacttatttgttttgttag 76 |||||||||| ||||||||||||| Sbjct: 5155 ttgtttacttgtttgttttgttag 5132
>emb|BX004831.16| Zebrafish DNA sequence from clone BUSM1-143H6 in linkage group 7, complete sequence Length = 119156 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 taaatgtatacatattttac 26 |||||||||||||||||||| Sbjct: 91301 taaatgtatacatattttac 91282
>gb|AC151989.4| Mus musculus BAC clone RP23-298C3 from chromosome 7, complete sequence Length = 217239 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ttgtttacttatttgttttgttag 76 |||||||||| ||||||||||||| Sbjct: 178403 ttgtttacttgtttgttttgttag 178380
>gb|AC018377.6|AC018377 Homo sapiens, clone RP11-4C16, complete sequence Length = 163644 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 632 atgttggtggtgatgatggc 651 |||||||||||||||||||| Sbjct: 102535 atgttggtggtgatgatggc 102554
>gb|AC153952.4| Mus musculus 10 BAC RP24-82M14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183398 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 gtttacttatttgttttgtt 74 |||||||||||||||||||| Sbjct: 13331 gtttacttatttgttttgtt 13312
>gb|AC158636.5| Mus musculus 10 BAC RP23-402A24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191887 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcttgtttacttatttgttt 70 |||||||||||||||||||| Sbjct: 88421 tcttgtttacttatttgttt 88402
>gb|AC155949.8| Mus musculus 6 BAC RP24-407P20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179931 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 631 gatgttggtggtgatgatgg 650 |||||||||||||||||||| Sbjct: 70429 gatgttggtggtgatgatgg 70410
>emb|AL935130.10| Mouse DNA sequence from clone RP23-452B16 on chromosome 2, complete sequence Length = 149810 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ataaatgtatacatatttta 25 |||||||||||||||||||| Sbjct: 133640 ataaatgtatacatatttta 133621
>gb|AC110758.3| Homo sapiens BAC clone RP11-24D11 from 4, complete sequence Length = 165028 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcttgtttacttatttgttt 70 |||||||||||||||||||| Sbjct: 116264 tcttgtttacttatttgttt 116245
>gb|AC027687.7| Homo sapiens chromosome 16 clone RP11-61L4, complete sequence Length = 169166 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ctgccgccatcgccaccatc 325 |||||||||||||||||||| Sbjct: 24845 ctgccgccatcgccaccatc 24864
>gb|AC106894.4| Homo sapiens BAC clone RP11-141E13 from 4, complete sequence Length = 183176 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcttgtttacttatttgttt 70 |||||||||||||||||||| Sbjct: 18842 tcttgtttacttatttgttt 18861
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 628 ggcgatgttggtggtgatgatggc 651 ||||||||||||||||||| |||| Sbjct: 2563741 ggcgatgttggtggtgatgctggc 2563764
>gb|AC018735.12| Homo sapiens BAC clone RP11-372A6 from 2, complete sequence Length = 208924 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ataaatgtatacatatttta 25 |||||||||||||||||||| Sbjct: 69970 ataaatgtatacatatttta 69951
>gb|AC012455.8| Homo sapiens BAC clone RP11-442O5 from 2, complete sequence Length = 97239 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 attaataaatgtatacatat 21 |||||||||||||||||||| Sbjct: 51594 attaataaatgtatacatat 51575
>gb|AF521895.1|AF521896S2 Streptomyces hygroscopicus ansamycin biosynthesis gene cluster, partial sequence Length = 12420 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 ggcgatgccgagcagcgccg 548 |||||||||||||||||||| Sbjct: 1427 ggcgatgccgagcagcgccg 1446
>gb|AE004708.1| Pseudomonas aeruginosa PAO1, section 269 of 529 of the complete genome Length = 12542 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 535 gccgagcagcgccgtggcgagcgc 558 |||||||||||||||||| ||||| Sbjct: 2370 gccgagcagcgccgtggccagcgc 2347
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 621 cgttggcggcgatgttggtg 640 |||||||||||||||||||| Sbjct: 2385269 cgttggcggcgatgttggtg 2385288
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 cgttgaagccgccctggaag 352 |||||||||||||||||||| Sbjct: 1421351 cgttgaagccgccctggaag 1421332
>dbj|AP005413.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0055N24 Length = 142702 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 cgagcagcgccgtggcgagc 556 |||||||||||||||||||| Sbjct: 109524 cgagcagcgccgtggcgagc 109505
>emb|BX005002.9| Zebrafish DNA sequence from clone CH211-130M12, complete sequence Length = 170274 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tgtcttgtttacttatttgt 68 |||||||||||||||||||| Sbjct: 63253 tgtcttgtttacttatttgt 63234
>dbj|BS000102.1| Pan troglodytes chromosome 22 clone:RP43-107D21, map 22, complete sequences Length = 65478 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cttgtttacttatttgtttt 71 |||||||||||||||||||| Sbjct: 41489 cttgtttacttatttgtttt 41470
>gb|AC020663.1|AC020663 Homo sapiens chromosome 16 clone RPCI-11_127I20, complete sequence Length = 154218 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ctgccgccatcgccaccatc 325 |||||||||||||||||||| Sbjct: 125025 ctgccgccatcgccaccatc 125044
>emb|BX001033.6| Zebrafish DNA sequence from clone CH211-286F4 in linkage group 7, complete sequence Length = 144689 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 taaatgtatacatattttac 26 |||||||||||||||||||| Sbjct: 37115 taaatgtatacatattttac 37096
>emb|BX321885.11| Zebrafish DNA sequence from clone CH211-240L19 in linkage group 4, complete sequence Length = 155649 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 attaataaatgtatacatatttta 25 ||||||||||||| |||||||||| Sbjct: 67641 attaataaatgtaaacatatttta 67664
>gb|BT001786.1| Drosophila melanogaster RH21608 full insert cDNA Length = 553 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 cgacgacgttggcggcgatg 634 |||||||||||||||||||| Sbjct: 112 cgacgacgttggcggcgatg 131
>gb|AC152721.3| Mus musculus BAC clone RP23-425F13 from chromosome 5, complete sequence Length = 221637 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 gatgttggtggtgatgatgg 650 |||||||||||||||||||| Sbjct: 146145 gatgttggtggtgatgatgg 146164
>gb|AC174763.1| Gasterosteus aculeatus clone VMRC28-119C03, complete sequence Length = 138567 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 626 gcggcgatgttggtggtgatgatg 649 ||||||||| |||||||||||||| Sbjct: 91275 gcggcgatgatggtggtgatgatg 91252
>emb|AL928967.9| Zebrafish DNA sequence from clone CH211-153A8, complete sequence Length = 186487 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tgtcttgtttacttatttgt 68 |||||||||||||||||||| Sbjct: 19574 tgtcttgtttacttatttgt 19555
>gb|AF037441.1|AF037441 Edwardsiella ictaluri putative 18.8 kDa protein (eip19), putative 17.8 kDa protein (eip18), putative 54.5 kDa protein (eip55), and putative 19.5 kDa protein (eip20) genes, complete cds Length = 5727 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ccgccatcgccaccatcgca 328 |||||||||||||||||||| Sbjct: 1095 ccgccatcgccaccatcgca 1076
>gb|M14632.1|PFAGP185 Plasmodium falciparum GP185 mRNA encoding antigenically diverse glycoprotein, complete cds Length = 1030 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aataaatgtatacatatttt 24 |||||||||||||||||||| Sbjct: 151 aataaatgtatacatatttt 170
>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C) Length = 158230 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 gccgagcagcgccgtggcgagcgc 558 |||||||||||||||||| ||||| Sbjct: 146832 gccgagcagcgccgtggccagcgc 146855
>emb|AL691509.6| Mouse DNA sequence from clone RP23-222A18 on chromosome 4, complete sequence Length = 217607 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 tcttgtttacttatttgttttgtt 74 ||||||||| |||||||||||||| Sbjct: 155706 tcttgtttatttatttgttttgtt 155729
>emb|AL645468.11| Mouse DNA sequence from clone RP23-246F18 on chromosome 4, complete sequence Length = 209764 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttgtttacttatttgttttg 72 |||||||||||||||||||| Sbjct: 192447 ttgtttacttatttgttttg 192428
>emb|X02919.1|PFANT195 Plasmodium falciparum mRNA for major surface antigens precursor (P195) Length = 5917 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aataaatgtatacatatttt 24 |||||||||||||||||||| Sbjct: 313 aataaatgtatacatatttt 332
>emb|X73968.1|HSWG0E7RP H.sapiens (clone wg0e7) repeat region DNA Length = 377 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 gatgttggtggtgatgatgg 650 |||||||||||||||||||| Sbjct: 118 gatgttggtggtgatgatgg 137
>gb|M35727.1|PFAP190A P.falciparum merozoite 190 kD precursor protein (p190) mRNA, 5' end Length = 3518 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aataaatgtatacatatttt 24 |||||||||||||||||||| Sbjct: 233 aataaatgtatacatatttt 252
>gb|M19143.1|PFAMMSAA P.falciparum major merozoite surface antigen (PMMSA) mRNA, complete cds, isolate FC27 Length = 5754 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aataaatgtatacatatttt 24 |||||||||||||||||||| Sbjct: 16 aataaatgtatacatatttt 35 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,647,826 Number of Sequences: 3902068 Number of extensions: 5647826 Number of successful extensions: 130810 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 128252 Number of HSP's gapped (non-prelim): 2554 length of query: 651 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 628 effective length of database: 17,143,297,704 effective search space: 10765990958112 effective search space used: 10765990958112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
