ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal41a17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 68 2e-08
2gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspa... 52 0.001
3gb|AC107230.8| Mus musculus chromosome 18, clone RP23-238L23, co... 48 0.022
4gb|AC098720.2| Mus musculus BAC clone RP23-2N16 from 5, complete... 48 0.022
5gb|AC109179.7| Mus musculus chromosome 18, clone RP23-382N7, com... 48 0.022
6gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, com... 48 0.022
7gb|AC161602.4| Mus musculus BAC clone RP23-336I5 from chromosome... 48 0.022
8gb|AC138620.4| Mus musculus BAC clone RP23-250E1 from 6, complet... 48 0.022
9ref|XM_472665.1| Oryza sativa (japonica cultivar-group), predic... 46 0.089
10emb|AM180150.1| Kerivoula papillosa microsatellite DNA, locus Kp... 46 0.089
11gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
12gb|AC141477.4| Mus musculus BAC clone RP23-386J14 from chromosom... 44 0.35
13gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
14gb|AC135254.2| Homo sapiens X BAC RP11-98L4 (Roswell Park Cancer... 44 0.35
15gb|AC118681.6| Mus musculus chromosome 16, clone RP23-473M11, co... 44 0.35
16gb|AC006507.21| Mus musculus strain 129S6/SvEvTac clone rp21-580... 44 0.35
17gb|AC140851.12| Mus musculus strain C57BL/6J clone rp23-358m4, c... 44 0.35
18gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
19gb|AC092948.6| Homo sapiens 3 BAC RP11-536F13 (Roswell Park Canc... 44 0.35
20tpg|BK000817.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M228,... 44 0.35
21tpg|BK000313.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M33, ... 44 0.35
22dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
23dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
24dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
25gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein... 44 0.35
26dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
27dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
28emb|CR626961.6| Zebrafish DNA sequence from clone CH211-160F13 i... 44 0.35
29emb|AL032628.1|CEY38H6A Caenorhabditis elegans YAC Y38H6A, compl... 44 0.35
30gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosom... 44 0.35
31gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
32emb|AL662966.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 0.35
33emb|CR394538.6| Zebrafish DNA sequence from clone DKEY-189I22 in... 44 0.35
34emb|AL691501.15| Mouse DNA sequence from clone RP23-220M11 on ch... 44 0.35
35gb|AC166834.2| Mus musculus BAC clone RP23-158D24 from chromosom... 44 0.35
36emb|AL731703.16| Mouse DNA sequence from clone RP23-100O16 on ch... 44 0.35
37gb|AC091981.4| Homo sapiens chromosome 5 clone RP11-549L3, compl... 44 0.35
38gb|AC135252.2| Homo sapiens X BAC RP11-196I10 (Roswell Park Canc... 44 0.35
39gb|AC122829.4| Mus musculus BAC clone RP23-224F12 from 10, compl... 42 1.4
40emb|AL683807.22| Human DNA sequence from clone RP13-297E16 on ch... 42 1.4
41emb|AL611922.7| Human DNA sequence from clone RP11-633N4 on chro... 42 1.4
42emb|AL445585.8| Human DNA sequence from clone RP11-54A3 on chrom... 42 1.4
43emb|AL732632.4| Zebrafish DNA sequence from clone CH211-140K5 in... 42 1.4
44gb|AE010214.1| Pyrococcus furiosus DSM 3638, section 89 of 173 o... 42 1.4
45gb|AC154732.3| Mus musculus BAC clone RP24-380F18 from chromosom... 42 1.4
46gb|AC092645.2| Homo sapiens BAC clone RP11-399B17 from 2, comple... 42 1.4
47gb|AC157689.2| Xenopus tropicalis clone ISB1-171O22, complete se... 42 1.4
48emb|CT030142.10| Mouse DNA sequence from clone RP23-422H22 on ch... 42 1.4
49gb|AF393505.1| Mus musculus potential meiotic DNA repair locus 40 5.5
50gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
51gb|AC166643.7| Mus musculus chromosome 18, clone RP24-241J8, com... 40 5.5
52gb|AC160962.2| Mus musculus BAC clone RP24-308N16 from chromosom... 40 5.5
53ref|XM_462070.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 5.5
54gb|AC182722.2| Populus trichocarpa clone Pop1-92L17, complete se... 40 5.5
55gb|AC132322.3| Mus musculus BAC clone RP24-262F3 from chromosome... 40 5.5
56gb|AC133954.3| Mus musculus BAC clone RP23-154C17 from chromosom... 40 5.5
57gb|AC134786.6| Mus musculus chromosome 15, clone RP24-502A14, co... 40 5.5
58gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.5
59gb|AC131178.11| Mus musculus chromosome 15, clone RP23-376I10, c... 40 5.5
60emb|CR931798.8| Mouse DNA sequence from clone RP23-89A4 on chrom... 40 5.5
61gb|AC132392.3| Mus musculus BAC clone RP23-386F15 from chromosom... 40 5.5
62gb|AC091611.5| Homo sapiens chromosome 1 clone RP11-369L17, comp... 40 5.5
63gb|AC129313.4| Mus musculus BAC clone RP23-342K4 from chromosome... 40 5.5
64gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, comple... 40 5.5
65gb|AC116323.6| Mus musculus BAC clone RP23-281F3 from 8, complet... 40 5.5
66gb|AC164955.2| Mus musculus BAC clone RP24-233H9 from chromosome... 40 5.5
67emb|BX664735.7| Human DNA sequence from clone RP11-665E4 on chro... 40 5.5
68emb|BX649569.5| Human DNA sequence from clone RP11-204I2 on chro... 40 5.5
69emb|BX088645.7| Human DNA sequence from clone RP11-74L19 on chro... 40 5.5
70emb|BX119321.4| Human DNA sequence from clone RP5-908D6 on chrom... 40 5.5
71emb|AL365192.22| Human DNA sequence from clone RP3-421H19 on chr... 40 5.5
72emb|AL162501.11| Human DNA sequence from clone RP11-138L21 on ch... 40 5.5
73emb|AL162233.14| Human DNA sequence from clone RP11-292B8 on chr... 40 5.5
74emb|AL021326.1|HS124C6 Human DNA sequence from clone RP1-124C6 o... 40 5.5
75emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 40 5.5
76emb|AL929353.1|PFA929353 Plasmodium falciparum strain 3D7, chrom... 40 5.5
77emb|AL596084.13| Mouse DNA sequence from clone RP23-196B5 on chr... 40 5.5
78emb|AL161551.2|ATCHRIV51 Arabidopsis thaliana DNA chromosome 4, ... 40 5.5
79emb|AL024486.1|ATT16H5 Arabidopsis thaliana DNA chromosome 4, BA... 40 5.5
80emb|AL021637.2|ATF18F4 Arabidopsis thaliana DNA chromosome 4, BA... 40 5.5
81emb|BX629348.9| Zebrafish DNA sequence from clone DKEY-4E7 in li... 40 5.5
82gb|AY093062.1| Arabidopsis thaliana putative serine carboxypepti... 40 5.5
83gb|AC004786.3| Arabidopsis thaliana chromosome 2 clone T20K9 map... 40 5.5
84gb|AC004401.3| Arabidopsis thaliana chromosome 2 clone F21P24 ma... 40 5.5
85gb|AC027141.7| Homo sapiens chromosome 18, clone RP11-29E21, com... 40 5.5
86emb|BX470198.7| Zebrafish DNA sequence from clone DKEY-18G6 in l... 40 5.5
87gb|AC010374.6| Homo sapiens chromosome 5 clone CTD-2057J6, compl... 40 5.5
88gb|AC154358.2| Mus musculus BAC clone RP23-173M16 from chromosom... 40 5.5
89gb|AC117725.23| Mus musculus chromosome 5, clone RP24-439K18, co... 40 5.5
90dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
91gb|AC160227.3| Loxodonta africana clone VMRC15-528D5, complete s... 40 5.5
92gb|AC148038.3| Ovis aries clone CH243-361I2, complete sequence 40 5.5
93gb|AC080014.13| Homo sapiens 3 BAC RP11-301G23 (Roswell Park Can... 40 5.5
94gb|AC069410.10| Homo sapiens 3 BAC RP11-32M21 (Roswell Park Canc... 40 5.5
95gb|AC112512.6| Homo sapiens 3 BAC RP11-717D12 (Roswell Park Canc... 40 5.5
96dbj|AB075955.1| Ixodes holocyclus mitochondrial DNA, complete se... 40 5.5
97gb|AC155075.10| Mus musculus chromosome 5, clone RP24-82B9, comp... 40 5.5
98emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 40 5.5
99gb|AC162375.2| Mus musculus BAC clone RP24-466F1 from chromosome... 40 5.5
100emb|BX295537.1| Platypus DNA sequence from clone XX-200B24, comp... 40 5.5
101gb|AC124527.5| Mus musculus BAC clone RP23-411B11 from 1, comple... 40 5.5
102emb|BX005035.9| Human DNA sequence from clone RP11-133G22 on chr... 40 5.5
103emb|AL355818.13| Human DNA sequence from clone RP4-667C9 on chro... 40 5.5
104emb|AL671975.12| Mouse DNA sequence from clone RP23-25O15 on chr... 40 5.5
105gb|AC130472.2| Homo sapiens chromosome 3 clone RP11-395P16, comp... 40 5.5 
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                    
Query: 1      tgtactcctatatatatgcccatgagactcaagcaata 38
              |||||||||||||||||||||||||| |||||||||||
Sbjct: 357876 tgtactcctatatatatgcccatgaggctcaagcaata 357913



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                    
Query: 1      tgtactcctatatatatgcccatgagactcaagcaata 38
              |||||||||||||||||||||| ||| |||||||||||
Sbjct: 372690 tgtactcctatatatatgcccacgaggctcaagcaata 372727
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>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete
              sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12
              (WM1.12) genes, complete cds; transposons Ophelia2,
              Angela3s, and XJ3, complete sequence; LRR protein WM1.3
              (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1,
              Jody, Angela, and XJ and Stowaway MITE, complete sequence;
              LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1)
              genes, complete cds; transposons XJ, XA, Angela, and Fred
              and WM1.11 gene, complete sequence; RPM1-like sequence and
              LRR protein WM1.10 (WM1.10) genes, complete cds; and
              transposon XJ, complete sequence
          Length = 198649

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 1      tgtactcctatatatatgcccatgagactcaagcaata 38
              |||||||||||||||||||| | ||| |||||||||||
Sbjct: 125536 tgtactcctatatatatgccgacgagtctcaagcaata 125573



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 9      tatatatatgcccatgagactcaagcaata 38
              |||||||||||||| ||| |||||||||||
Sbjct: 123319 tatatatatgcccacgaggctcaagcaata 123348
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>gb|AC107230.8| Mus musculus chromosome 18, clone RP23-238L23, complete sequence
          Length = 192286

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 310    actcctcctctttctcccttctccttca 337
              |||||||||||||| |||||||||||||
Sbjct: 100325 actcctcctctttcccccttctccttca 100352
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>gb|AC098720.2| Mus musculus BAC clone RP23-2N16 from 5, complete sequence
          Length = 214995

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 312   tcctcctctttctcccttctcctt 335
             ||||||||||||||||||||||||
Sbjct: 77972 tcctcctctttctcccttctcctt 77995
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>gb|AC109179.7| Mus musculus chromosome 18, clone RP23-382N7, complete sequence
          Length = 241644

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 310  actcctcctctttctcccttctccttca 337
            |||||||||||||| |||||||||||||
Sbjct: 6140 actcctcctctttcccccttctccttca 6167
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>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence
          Length = 198281

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 312   tcctcctctttctcccttctcctt 335
             ||||||||||||||||||||||||
Sbjct: 15627 tcctcctctttctcccttctcctt 15604
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>gb|AC161602.4| Mus musculus BAC clone RP23-336I5 from chromosome 6, complete sequence
          Length = 224158

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 311    ctcctcctctttctcccttctcct 334
              ||||||||||||||||||||||||
Sbjct: 174727 ctcctcctctttctcccttctcct 174750
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>gb|AC138620.4| Mus musculus BAC clone RP23-250E1 from 6, complete sequence
          Length = 209846

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 311    ctcctcctctttctcccttctcct 334
              ||||||||||||||||||||||||
Sbjct: 149815 ctcctcctctttctcccttctcct 149792
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>ref|XM_472665.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 654

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 369 atccacctttttcgttatctcatcaaccttatggattag 407
           ||||| || |||| |||||||||||||||| ||||||||
Sbjct: 606 atccaactctttctttatctcatcaaccttctggattag 568
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>emb|AM180150.1| Kerivoula papillosa microsatellite DNA, locus Kpa33, clone
           KpaN1f09A
          Length = 606

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 312 tcctcctctttctcccttctccttcat 338
           ||||||||| |||||||||||||||||
Sbjct: 268 tcctcctctctctcccttctccttcat 242
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>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0096A19 map near 50283S, complete sequence
          Length = 139969

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 311   ctcctcctctttctcccttctccttc 336
             ||||||||||||||| ||||||||||
Sbjct: 90829 ctcctcctctttctcacttctccttc 90854



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 311   ctcctcctctttctcccttctccttc 336
             ||||||||||||||| ||||||||||
Sbjct: 54344 ctcctcctctttctcacttctccttc 54369
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>gb|AC141477.4| Mus musculus BAC clone RP23-386J14 from chromosome 10, complete
             sequence
          Length = 213720

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 305   ctacgactcctcctctttctcccttc 330
             ||||| ||||||||||||||||||||
Sbjct: 54618 ctacgtctcctcctctttctcccttc 54643
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>gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0030I07, complete sequence
          Length = 122733

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 311   ctcctcctctttctcccttctccttc 336
             ||||||||||||||| ||||||||||
Sbjct: 50160 ctcctcctctttctcacttctccttc 50185
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>gb|AC135254.2| Homo sapiens X BAC RP11-98L4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 62121

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 311   ctcctcctctttctcccttctccttc 336
             ||||||||| ||||||||||||||||
Sbjct: 35569 ctcctcctccttctcccttctccttc 35544
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>gb|AC118681.6| Mus musculus chromosome 16, clone RP23-473M11, complete sequence
          Length = 279112

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 182    catcattgtatatattgttata 203
              ||||||||||||||||||||||
Sbjct: 171255 catcattgtatatattgttata 171276
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>gb|AC006507.21| Mus musculus strain 129S6/SvEvTac clone rp21-580p20 map 10, complete
             sequence
          Length = 185664

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 305   ctacgactcctcctctttctcccttc 330
             ||||| ||||||||||||||||||||
Sbjct: 29441 ctacgtctcctcctctttctcccttc 29416
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>gb|AC140851.12| Mus musculus strain C57BL/6J clone rp23-358m4, complete sequence
          Length = 214913

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 305   ctacgactcctcctctttctcccttc 330
             ||||| ||||||||||||||||||||
Sbjct: 16867 ctacgtctcctcctctttctcccttc 16842
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>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBa0023F01, complete sequence
          Length = 145009

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 311  ctcctcctctttctcccttctccttc 336
            ||||||||||||||| ||||||||||
Sbjct: 1818 ctcctcctctttctcacttctccttc 1793
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>gb|AC092948.6| Homo sapiens 3 BAC RP11-536F13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 144578

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 21    catgagactcaagcaatataat 42
             ||||||||||||||||||||||
Sbjct: 72397 catgagactcaagcaatataat 72376
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>tpg|BK000817.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M228, complete sequence
          Length = 1295

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 311 ctcctcctctttctcccttctccttc 336
           ||||||||||||||| ||||||||||
Sbjct: 366 ctcctcctctttctcacttctccttc 391
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>tpg|BK000313.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M33, complete sequence
          Length = 1233

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 311 ctcctcctctttctcccttctccttc 336
           ||||||||||||||| ||||||||||
Sbjct: 369 ctcctcctctttctcacttctccttc 394
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 311      ctcctcctctttctcccttctccttc 336
                ||||||||||||||| ||||||||||
Sbjct: 13292795 ctcctcctctttctcacttctccttc 13292820
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 311      ctcctcctctttctcccttctccttc 336
                ||||||||||||||| ||||||||||
Sbjct: 26587902 ctcctcctctttctcacttctccttc 26587927



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 311      ctcctcctctttctcccttctccttc 336
                ||||||||||||||| ||||||||||
Sbjct: 13853270 ctcctcctctttctcacttctccttc 13853295



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 311      ctcctcctctttctcccttctccttc 336
                ||||||||||||||| ||||||||||
Sbjct: 13816785 ctcctcctctttctcacttctccttc 13816810
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 311     ctcctcctctttctcccttctccttc 336
               ||||||||||||||| ||||||||||
Sbjct: 7619503 ctcctcctctttctcacttctccttc 7619528
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>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene,
             complete cds
          Length = 25080

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 1     tgtactcctatatatatgcccatgag 26
             |||||||||||||| |||||||||||
Sbjct: 11166 tgtactcctatatacatgcccatgag 11191
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>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0086P08
          Length = 145312

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 311   ctcctcctctttctcccttctccttc 336
             ||||||||||||||| ||||||||||
Sbjct: 30079 ctcctcctctttctcacttctccttc 30104
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>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0708G02
          Length = 168976

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 311    ctcctcctctttctcccttctccttc 336
              ||||||||||||||| ||||||||||
Sbjct: 168295 ctcctcctctttctcacttctccttc 168320
to top
>emb|CR626961.6| Zebrafish DNA sequence from clone CH211-160F13 in linkage group 10,
             complete sequence
          Length = 167229

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 311   ctcctcctctttctcccttctccttc 336
             ||||||||||||||| ||||||||||
Sbjct: 62795 ctcctcctctttctctcttctccttc 62820
to top
>emb|AL032628.1|CEY38H6A Caenorhabditis elegans YAC Y38H6A, complete sequence
          Length = 24222

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 87    acgttttccaaaattttgtaac 108
             ||||||||||||||||||||||
Sbjct: 14812 acgttttccaaaattttgtaac 14791
to top
>gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosome 7, complete sequence
          Length = 228892

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 311    ctcctcctctttctcccttctc 332
              ||||||||||||||||||||||
Sbjct: 172116 ctcctcctctttctcccttctc 172137
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 311      ctcctcctctttctcccttctccttc 336
                ||||||||||||||| ||||||||||
Sbjct: 26913166 ctcctcctctttctcacttctccttc 26913191



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 311      ctcctcctctttctcccttctccttc 336
                ||||||||||||||| ||||||||||
Sbjct: 13935272 ctcctcctctttctcacttctccttc 13935297



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 311      ctcctcctctttctcccttctccttc 336
                ||||||||||||||| ||||||||||
Sbjct: 13898787 ctcctcctctttctcacttctccttc 13898812
to top
>emb|AL662966.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035B13,
             complete sequence
          Length = 145234

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 311   ctcctcctctttctcccttctccttc 336
             ||||||||||||||| ||||||||||
Sbjct: 64894 ctcctcctctttctcacttctccttc 64919
to top
>emb|CR394538.6| Zebrafish DNA sequence from clone DKEY-189I22 in linkage group 10,
             complete sequence
          Length = 155394

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 311   ctcctcctctttctcccttctccttc 336
             ||||||||||||||| ||||||||||
Sbjct: 70205 ctcctcctctttctctcttctccttc 70180
to top
>emb|AL691501.15| Mouse DNA sequence from clone RP23-220M11 on chromosome 4, complete
             sequence
          Length = 176069

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 136   agagccaaatgataatgacaaa 157
             ||||||||||||||||||||||
Sbjct: 21368 agagccaaatgataatgacaaa 21347
to top
>gb|AC166834.2| Mus musculus BAC clone RP23-158D24 from chromosome 7, complete sequence
          Length = 212016

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 311    ctcctcctctttctcccttctc 332
              ||||||||||||||||||||||
Sbjct: 139120 ctcctcctctttctcccttctc 139099
to top
>emb|AL731703.16| Mouse DNA sequence from clone RP23-100O16 on chromosome 2, complete
             sequence
          Length = 187541

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 311   ctcctcctctttctcccttctc 332
             ||||||||||||||||||||||
Sbjct: 54022 ctcctcctctttctcccttctc 54001
to top
>gb|AC091981.4| Homo sapiens chromosome 5 clone RP11-549L3, complete sequence
          Length = 187685

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 311    ctcctcctctttctcccttctccttc 336
              ||||||||| ||||||||||||||||
Sbjct: 128960 ctcctcctccttctcccttctccttc 128985
to top
>gb|AC135252.2| Homo sapiens X BAC RP11-196I10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 62101

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 311   ctcctcctctttctcccttctccttc 336
             ||||||||| ||||||||||||||||
Sbjct: 26557 ctcctcctccttctcccttctccttc 26582
to top
>gb|AC122829.4| Mus musculus BAC clone RP23-224F12 from 10, complete sequence
          Length = 155915

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   agagccaaatgataatgacaa 156
             |||||||||||||||||||||
Sbjct: 24611 agagccaaatgataatgacaa 24591
to top
>emb|AL683807.22| Human DNA sequence from clone RP13-297E16 on chromosome X Contains the
              DXYS155E gene for DNA segment on chromosome X and Y
              (unique) 155 expressed sequence (XE7, XE7Y), the ASMT gene
              for acetylserotonin O-methyltransferase (ASMTY, HIOMT,
              HIOMTY), three novel genes and three CpG islands, complete
              sequence
          Length = 189825

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 311    ctcctcctctttctcccttctcctt 335
              |||||||||||||||||| ||||||
Sbjct: 153241 ctcctcctctttctccctcctcctt 153265



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 311    ctcctcctctttctcccttctcct 334
              |||||||||||||||||| |||||
Sbjct: 153225 ctcctcctctttctccctcctcct 153248
to top
>emb|AL611922.7| Human DNA sequence from clone RP11-633N4 on chromosome 9, complete
              sequence
          Length = 176612

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 312    tcctcctctttctcccttctccttc 336
              ||||||||||||| |||||||||||
Sbjct: 167277 tcctcctctttcttccttctccttc 167301
to top
>emb|AL445585.8| Human DNA sequence from clone RP11-54A3 on chromosome 13, complete
             sequence
          Length = 161310

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    tttccaaaattttgtaacaaa 111
             |||||||||||||||||||||
Sbjct: 74098 tttccaaaattttgtaacaaa 74118
to top
>emb|AL732632.4| Zebrafish DNA sequence from clone CH211-140K5 in linkage group 14
            Contains two novel retroelements, the 5' part of a novel
            gene similar to GRIN3A (ionotropic glutamate receptor,
            N-methyl-D-aspartate 3A (GRIN3A) and four CpG islands,
            complete sequence
          Length = 159482

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 312  tcctcctctttctcccttctccttc 336
            |||||||||||||| ||||||||||
Sbjct: 7045 tcctcctctttctctcttctccttc 7069
to top
>gb|AE010214.1| Pyrococcus furiosus DSM 3638, section 89 of 173 of the complete genome
          Length = 11615

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 374   cctttttcgttatctcatcaacctt 398
             |||||||| ||||||||||||||||
Sbjct: 10181 cctttttcattatctcatcaacctt 10205
to top
>gb|AC154732.3| Mus musculus BAC clone RP24-380F18 from chromosome 12, complete sequence
          Length = 172458

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 311    ctcctcctctttctcccttctcctt 335
              |||||||||||||||||| ||||||
Sbjct: 152324 ctcctcctctttctccctcctcctt 152348
to top
>gb|AC092645.2| Homo sapiens BAC clone RP11-399B17 from 2, complete sequence
          Length = 147390

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 316   cctctttctcccttctccttc 336
             |||||||||||||||||||||
Sbjct: 17066 cctctttctcccttctccttc 17046
to top
>gb|AC157689.2| Xenopus tropicalis clone ISB1-171O22, complete sequence
          Length = 80070

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 315   tcctctttctcccttctcctt 335
             |||||||||||||||||||||
Sbjct: 41563 tcctctttctcccttctcctt 41583
to top
>emb|CT030142.10| Mouse DNA sequence from clone RP23-422H22 on chromosome 12, complete
              sequence
          Length = 203796

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 311    ctcctcctctttctcccttctcctt 335
              |||||||||||||||||| ||||||
Sbjct: 118399 ctcctcctctttctccctcctcctt 118375
to top
>gb|AF393505.1| Mus musculus potential meiotic DNA repair locus
          Length = 17157

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 312  tcctcctctttctcccttct 331
            ||||||||||||||||||||
Sbjct: 2920 tcctcctctttctcccttct 2939
to top
>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19
              map E30331S, complete sequence
          Length = 164820

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 311    ctcctcctctttctcccttctcct 334
              ||||||||||||||| ||||||||
Sbjct: 116122 ctcctcctctttctcacttctcct 116099
to top
>gb|AC166643.7| Mus musculus chromosome 18, clone RP24-241J8, complete sequence
          Length = 173501

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    aaatatatatacgttttcca 96
             ||||||||||||||||||||
Sbjct: 69343 aaatatatatacgttttcca 69362
to top
>gb|AC160962.2| Mus musculus BAC clone RP24-308N16 from chromosome 13, complete
             sequence
          Length = 147866

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   caagagccaaatgataatga 153
             ||||||||||||||||||||
Sbjct: 34527 caagagccaaatgataatga 34508
to top
>ref|XM_462070.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G13134g)
           partial mRNA
          Length = 1599

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 138 agccaaatgataatgacaaa 157
           ||||||||||||||||||||
Sbjct: 146 agccaaatgataatgacaaa 165
to top
>gb|AC182722.2| Populus trichocarpa clone Pop1-92L17, complete sequence
          Length = 97881

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   tcctcctctttctcccttct 331
             ||||||||||||||||||||
Sbjct: 84767 tcctcctctttctcccttct 84748
to top
>gb|AC132322.3| Mus musculus BAC clone RP24-262F3 from chromosome 13, complete sequence
          Length = 155179

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    ctcctcctctttctcccttc 330
              ||||||||||||||||||||
Sbjct: 120756 ctcctcctctttctcccttc 120775



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    ctcctcctctttctcccttc 330
              ||||||||||||||||||||
Sbjct: 120511 ctcctcctctttctcccttc 120530
to top
>gb|AC133954.3| Mus musculus BAC clone RP23-154C17 from chromosome 5, complete
           sequence
          Length = 199991

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 attgtatatattgttatata 205
           ||||||||||||||||||||
Sbjct: 883 attgtatatattgttatata 864
to top
>gb|AC134786.6| Mus musculus chromosome 15, clone RP24-502A14, complete sequence
          Length = 179157

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 311   ctcctcctctttctcccttctcct 334
             ||||||||||| ||||||||||||
Sbjct: 94933 ctcctcctcttcctcccttctcct 94910
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 311      ctcctcctctttctcccttctcct 334
                ||||||||||||||| ||||||||
Sbjct: 17447621 ctcctcctctttctcacttctcct 17447644
to top
>gb|AC131178.11| Mus musculus chromosome 15, clone RP23-376I10, complete sequence
          Length = 170753

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 311   ctcctcctctttctcccttctcct 334
             ||||||||||| ||||||||||||
Sbjct: 93398 ctcctcctcttcctcccttctcct 93421
to top
>emb|CR931798.8| Mouse DNA sequence from clone RP23-89A4 on chromosome 4, complete
             sequence
          Length = 83980

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 311   ctcctcctctttctcccttctcct 334
             ||||||||||||||||||| ||||
Sbjct: 64761 ctcctcctctttctcccttttcct 64784
to top
>gb|AC132392.3| Mus musculus BAC clone RP23-386F15 from chromosome 7, complete sequence
          Length = 208499

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   cctcctctttctcccttctc 332
             ||||||||||||||||||||
Sbjct: 85638 cctcctctttctcccttctc 85619
to top
>gb|AC091611.5| Homo sapiens chromosome 1 clone RP11-369L17, complete sequence
          Length = 198486

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   attgtatatattgttatata 205
             ||||||||||||||||||||
Sbjct: 92007 attgtatatattgttatata 92026
to top
>gb|AC129313.4| Mus musculus BAC clone RP23-342K4 from chromosome 8, complete sequence
          Length = 215576

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    aacaaaaccaaaactcatga 125
              ||||||||||||||||||||
Sbjct: 160097 aacaaaaccaaaactcatga 160116
to top
>gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, complete sequence
          Length = 257003

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    tcctcctctttctcccttct 331
              ||||||||||||||||||||
Sbjct: 198053 tcctcctctttctcccttct 198072
to top
>gb|AC116323.6| Mus musculus BAC clone RP23-281F3 from 8, complete sequence
          Length = 182204

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 312    tcctcctctttctcccttct 331
              ||||||||||||||||||||
Sbjct: 139595 tcctcctctttctcccttct 139576
to top
>gb|AC164955.2| Mus musculus BAC clone RP24-233H9 from chromosome 9, complete sequence
          Length = 221907

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    tcattgtatatattgttata 203
              ||||||||||||||||||||
Sbjct: 167622 tcattgtatatattgttata 167603
to top
>emb|BX664735.7| Human DNA sequence from clone RP11-665E4 on chromosome 9 Contains the 5'
              end of the gene for a novel protein similar to contactin
              associated protein-like 3 (CNTNAP3) and a CpG island,
              complete sequence
          Length = 187005

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 185    cattgtatatattgttatatacactctg 212
              |||| |||| ||||||||||||||||||
Sbjct: 183152 cattttataaattgttatatacactctg 183179
to top
>emb|BX649569.5| Human DNA sequence from clone RP11-204I2 on chromosome 9 Contains part
             of the gene for a novel protein similar to contactin
             associated protein-like 3 (CNTNAP3), complete sequence
          Length = 162657

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 185   cattgtatatattgttatatacactctg 212
             |||| |||| ||||||||||||||||||
Sbjct: 74857 cattttataaattgttatatacactctg 74830
to top
>emb|BX088645.7| Human DNA sequence from clone RP11-74L19 on chromosome 9 Contains a
             pseudogene similar to part of contactin associated protein
             family, a novel pseudogene and a CpG island, complete
             sequence
          Length = 152623

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 185   cattgtatatattgttatatacactctg 212
             |||| |||| ||||||||||||||||||
Sbjct: 60421 cattttataaattgttatatacactctg 60394
to top
>emb|BX119321.4| Human DNA sequence from clone RP5-908D6 on chromosome 1 Contains the 5'
             end of a novel pseudogene and a guanylate binding protein
             pseudogene, complete sequence
          Length = 68235

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 312   tcctcctctttctcccttctcctt 335
             ||||||||||||| ||||||||||
Sbjct: 62649 tcctcctctttcttccttctcctt 62672
to top
>emb|AL365192.22| Human DNA sequence from clone RP3-421H19 on chromosome 6 Contains the
             5' part of a novel protein similar to ribosomal protein
             L14 (L14p/L23e), a novel gene, the CAPN11 gene for calpain
             11 and one CpG island, complete sequence
          Length = 89351

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   ctctttctcccttctccttc 336
             ||||||||||||||||||||
Sbjct: 52910 ctctttctcccttctccttc 52929
to top
>emb|AL162501.11| Human DNA sequence from clone RP11-138L21 on chromosome 9 Contains the
             5' end of the CNTNAP3 gene for a contactin associated
             protein-like 3 and two CpG islands, complete sequence
          Length = 118564

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 185   cattgtatatattgttatatacactctg 212
             |||| |||| ||||||||||||||||||
Sbjct: 59318 cattttataaattgttatatacactctg 59345
to top
>emb|AL162233.14| Human DNA sequence from clone RP11-292B8 on chromosome 9 Contains a
             pseudogene similar to part of contactin associated
             protein-like 3 (CNTNAP3), an RNA binding motif protein 17
             (RBM17) pseudogene and a CpG island, complete sequence
          Length = 179833

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 185   cattgtatatattgttatatacactctg 212
             |||| |||| ||||||||||||||||||
Sbjct: 67547 cattttataaattgttatatacactctg 67574
to top
>emb|AL021326.1|HS124C6 Human DNA sequence from clone RP1-124C6 on chromosome 6q21 Contains a
             putative novel gene, complete sequence
          Length = 103567

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   cctctttctcccttctcctt 335
             ||||||||||||||||||||
Sbjct: 78955 cctctttctcccttctcctt 78974
to top
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
               hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     agccaaatgataatgacaaa 157
               ||||||||||||||||||||
Sbjct: 1008308 agccaaatgataatgacaaa 1008289
to top
>emb|AL929353.1|PFA929353 Plasmodium falciparum strain 3D7, chromosome 5, segment 3/4
          Length = 343050

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   attgtatatattgttatata 205
             ||||||||||||||||||||
Sbjct: 57324 attgtatatattgttatata 57305
to top
>emb|AL596084.13| Mouse DNA sequence from clone RP23-196B5 on chromosome 11 Contains the
             Pank3 gene for pantothenate kinase 3, a pseudogene similar
             to part of ribosomal protein L7a (Rpl7a), a pseudogene
             similar to part of fibrillarin (Fbl), the Rars gene for
             arginyl-tRNA synthetase, the 3' end of the gene for a
             novel protein similar to human KIBRA and two CpG islands,
             complete sequence
          Length = 181103

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 311   ctcctcctctttctcccttctcct 334
             ||||||||||||||||| ||||||
Sbjct: 81975 ctcctcctctttctcccctctcct 81998
to top
>emb|AL161551.2|ATCHRIV51 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 51
          Length = 197114

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    aaaaccaaaactcatgacta 128
              ||||||||||||||||||||
Sbjct: 175134 aaaaccaaaactcatgacta 175153
to top
>emb|AL024486.1|ATT16H5 Arabidopsis thaliana DNA chromosome 4, BAC clone T16H5 (ESSAII project)
          Length = 95417

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   aaaaccaaaactcatgacta 128
             ||||||||||||||||||||
Sbjct: 95052 aaaaccaaaactcatgacta 95071
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>emb|AL021637.2|ATF18F4 Arabidopsis thaliana DNA chromosome 4, BAC clone F18F4 (ESSA
           project)
          Length = 99725

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 109 aaaaccaaaactcatgacta 128
           ||||||||||||||||||||
Sbjct: 42  aaaaccaaaactcatgacta 61
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>emb|BX629348.9| Zebrafish DNA sequence from clone DKEY-4E7 in linkage group 9, complete
              sequence
          Length = 134366

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    tgtatatattgttatataca 207
              ||||||||||||||||||||
Sbjct: 117911 tgtatatattgttatataca 117930
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>gb|AY093062.1| Arabidopsis thaliana putative serine carboxypeptidase I (At2g22980)
           mRNA, complete cds
          Length = 1851

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 catcattgtatatattgtta 201
           ||||||||||||||||||||
Sbjct: 852 catcattgtatatattgtta 833
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>gb|AC004786.3| Arabidopsis thaliana chromosome 2 clone T20K9 map CIC06C07, complete
             sequence
          Length = 86686

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   catcattgtatatattgtta 201
             ||||||||||||||||||||
Sbjct: 75944 catcattgtatatattgtta 75925
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>gb|AC004401.3| Arabidopsis thaliana chromosome 2 clone F21P24 map CIC06C07, complete
             sequence
          Length = 94038

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   catcattgtatatattgtta 201
             ||||||||||||||||||||
Sbjct: 11802 catcattgtatatattgtta 11783
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>gb|AC027141.7| Homo sapiens chromosome 18, clone RP11-29E21, complete sequence
          Length = 146286

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   actcctcctctttctccctt 329
             ||||||||||||||||||||
Sbjct: 80490 actcctcctctttctccctt 80471
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>emb|BX470198.7| Zebrafish DNA sequence from clone DKEY-18G6 in linkage group 5,
            complete sequence
          Length = 217036

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 181  tcatcattgtatatattgttatat 204
            ||||||||||||||||||| ||||
Sbjct: 7480 tcatcattgtatatattgtaatat 7457
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>gb|AC010374.6| Homo sapiens chromosome 5 clone CTD-2057J6, complete sequence
          Length = 117372

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   attgtatatattgttatata 205
             ||||||||||||||||||||
Sbjct: 83282 attgtatatattgttatata 83301
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>gb|AC154358.2| Mus musculus BAC clone RP23-173M16 from chromosome 13, complete sequence
          Length = 193594

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 317    ctctttctcccttctccttc 336
              ||||||||||||||||||||
Sbjct: 135466 ctctttctcccttctccttc 135485
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>gb|AC117725.23| Mus musculus chromosome 5, clone RP24-439K18, complete sequence
          Length = 180960

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   attgtatatattgttatata 205
             ||||||||||||||||||||
Sbjct: 61579 attgtatatattgttatata 61598
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 311      ctcctcctctttctcccttctcct 334
                ||||||||||||||| ||||||||
Sbjct: 17441162 ctcctcctctttctcacttctcct 17441185
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>gb|AC160227.3| Loxodonta africana clone VMRC15-528D5, complete sequence
          Length = 106354

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     actcctatatatatgcccatgaga 27
             ||||||||||||||||||| ||||
Sbjct: 24582 actcctatatatatgcccaagaga 24605
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>gb|AC148038.3| Ovis aries clone CH243-361I2, complete sequence
          Length = 198973

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 176   acttatcatcattgtatatattgt 199
             |||| |||||||||||||||||||
Sbjct: 85713 acttttcatcattgtatatattgt 85690
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>gb|AC080014.13| Homo sapiens 3 BAC RP11-301G23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163111

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   cctcctctttctcccttctc 332
             ||||||||||||||||||||
Sbjct: 86883 cctcctctttctcccttctc 86864
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>gb|AC069410.10| Homo sapiens 3 BAC RP11-32M21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 176924

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     attttgtaacaaaaccaaaa 118
              ||||||||||||||||||||
Sbjct: 141333 attttgtaacaaaaccaaaa 141314
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>gb|AC112512.6| Homo sapiens 3 BAC RP11-717D12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 176910

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     atatatacgttttccaaaat 100
              ||||||||||||||||||||
Sbjct: 167515 atatatacgttttccaaaat 167496
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>dbj|AB075955.1| Ixodes holocyclus mitochondrial DNA, complete sequence
          Length = 15007

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 188  tgtatatattgttatataca 207
            ||||||||||||||||||||
Sbjct: 8574 tgtatatattgttatataca 8555
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>gb|AC155075.10| Mus musculus chromosome 5, clone RP24-82B9, complete sequence
          Length = 236335

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     atgagactcaagcaatataa 41
              ||||||||||||||||||||
Sbjct: 192592 atgagactcaagcaatataa 192611
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    gaatccacctttttcgttat 386
              ||||||||||||||||||||
Sbjct: 236946 gaatccacctttttcgttat 236965
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>gb|AC162375.2| Mus musculus BAC clone RP24-466F1 from chromosome 9, complete sequence
          Length = 164119

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 311    ctcctcctctttctcccttctcct 334
              ||||||||| ||||||||||||||
Sbjct: 131627 ctcctcctccttctcccttctcct 131604



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 311    ctcctcctctttctcccttctcct 334
              ||||||||| ||||||||||||||
Sbjct: 131596 ctcctcctccttctcccttctcct 131573
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>emb|BX295537.1| Platypus DNA sequence from clone XX-200B24, complete sequence
          Length = 137155

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 311   ctcctcctctttctcccttctcct 334
             |||||||||||||||||| |||||
Sbjct: 13227 ctcctcctctttctccctcctcct 13250
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>gb|AC124527.5| Mus musculus BAC clone RP23-411B11 from 1, complete sequence
          Length = 189288

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    attgtatatattgttatata 205
              ||||||||||||||||||||
Sbjct: 118167 attgtatatattgttatata 118148
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>emb|BX005035.9| Human DNA sequence from clone RP11-133G22 on chromosome 9, complete
             sequence
          Length = 146143

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 185   cattgtatatattgttatatacactctg 212
             |||| |||| ||||||||||||||||||
Sbjct: 71358 cattttataaattgttatatacactctg 71385
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>emb|AL355818.13| Human DNA sequence from clone RP4-667C9 on chromosome 1, complete
             sequence
          Length = 101854

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 312   tcctcctctttctcccttctcctt 335
             ||||||||||||| ||||||||||
Sbjct: 47317 tcctcctctttcttccttctcctt 47294
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>emb|AL671975.12| Mouse DNA sequence from clone RP23-25O15 on chromosome X, complete
              sequence
          Length = 231530

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 311    ctcctcctctttctcccttctcct 334
              |||||||||||||| |||||||||
Sbjct: 176303 ctcctcctctttcttccttctcct 176280
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>gb|AC130472.2| Homo sapiens chromosome 3 clone RP11-395P16, complete sequence
          Length = 194160

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    atatatacgttttccaaaat 100
             ||||||||||||||||||||
Sbjct: 63065 atatatacgttttccaaaat 63046


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,107,886
Number of Sequences: 3902068
Number of extensions: 5107886
Number of successful extensions: 121967
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121324
Number of HSP's gapped (non-prelim): 643
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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