ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal41a14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GA2L1_MOUSE (Q8JZP9) GAS2-like protein 1 (Growth arrest-specific... 33 0.53
2NFAT5_HUMAN (O94916) Nuclear factor of activated T-cells 5 (T-ce... 31 2.6
3HAP5_YEAST (Q02516) Transcriptional activator HAP5 31 2.6
4FIT3_YEAST (Q08907) Facilitator of iron transport 3 precursor 31 3.4
5ASCL2_HUMAN (Q99929) Achaete-scute homolog 2 (HASH2) 30 5.8
6PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presy... 30 7.6
7PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presyna... 30 7.6
8KLKB1_RAT (P14272) Plasma kallikrein precursor (EC 3.4.21.34) (P... 29 10.0

>GA2L1_MOUSE (Q8JZP9) GAS2-like protein 1 (Growth arrest-specific 2-like 1)|
          Length = 678

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 450 DSDHSWRDRNSWRGSGGAPGWSRPESPRTSTKLAPTSSK 334
           D  HSW  R    G  G  G S P++PR  +  AP  S+
Sbjct: 452 DGQHSWVARGRGGGGSGGSGRSTPQTPRALSPAAPRPSR 490



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>NFAT5_HUMAN (O94916) Nuclear factor of activated T-cells 5 (T-cell transcription|
            factor NFAT5) (NF-AT5) (Tonicity-responsive
            enhancer-binding protein) (TonE-binding protein) (TonEBP)
          Length = 1531

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
 Frame = +2

Query: 29   VLFSNHPTTGSRFSSNGEETPHPVSHLHNRTPMFP*MAEIKQVYSKRNSFSTTPQEIAPM 208
            +LFSN  T  +  S   ++ P  +    N+ PM     + + ++ ++++ +   QE  PM
Sbjct: 1268 ILFSNQNTMATMASP--KQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPM 1325

Query: 209  HFSLDAYGRVLQLPGSEMDSRPRSPL--------LLLGWPSVRRKYV 325
             F   +    LQ PG       ++PL        L+ G PS + + V
Sbjct: 1326 QFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQV 1372



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>HAP5_YEAST (Q02516) Transcriptional activator HAP5|
          Length = 242

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = -2

Query: 429 DRNSWRGSGGAPGWSRPESPRTSTKLAPTSSKTWRTYFRRTDGHPSSSSGERGRLSISE 253
           DRN     G  P  S PE P+ ST +        R Y  +     +   GE  RL +SE
Sbjct: 3   DRNFSPQQGQGPQESLPEGPQPSTMIQREEMNMPRQYSEQQQLQENEGEGENTRLPVSE 61



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>FIT3_YEAST (Q08907) Facilitator of iron transport 3 precursor|
          Length = 204

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 417 WRGSGGAPGWSRPESPRTSTKLAPTSSKTWRTYFRRTDGHPSSSS 283
           W G G +  WS P S  TS++ A +S+ T  T    T    +SSS
Sbjct: 130 WTGEGSSNTWS-PSSTSTSSEAATSSASTTATTTAETSSSATSSS 173



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>ASCL2_HUMAN (Q99929) Achaete-scute homolog 2 (HASH2)|
          Length = 193

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 25/78 (32%), Positives = 33/78 (42%)
 Frame = -2

Query: 426 RNSWRGSGGAPGWSRPESPRTSTKLAPTSSKTWRTYFRRTDGHPSSSSGERGRLSISEPG 247
           RN+  G G  P   RP +PR      P ++             PS +S   GR   SEPG
Sbjct: 113 RNALAG-GLRPQAVRPSAPRGPPGTTPVAAS------------PSRASSSPGRGGSSEPG 159

Query: 246 S*RTLP*ASREKCMGAIS 193
           S R+   +    C GA+S
Sbjct: 160 SPRSAYSSDDSGCEGALS 177



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>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = +3

Query: 45   TQRPDHV---SPPTEKKRPIPFLIYIIGPRCFHKWQKSSKYTAKGIHSVPRPRKSPPCIF 215
            TQ P ++   SPP +KKRP P  I          +  S       +   P P KSP  ++
Sbjct: 3474 TQSPPYMGATSPPKDKKRPTPLEI---------GYSSSHLRADPTVQLAPSPPKSPKVLY 3524

Query: 216  -PLTPMA 233
             P++P++
Sbjct: 3525 SPISPLS 3531



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>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein)
          Length = 5085

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = +3

Query: 45   TQRPDHV---SPPTEKKRPIPFLIYIIGPRCFHKWQKSSKYTAKGIHSVPRPRKSPPCIF 215
            TQ P ++   SPP +KKRP P  I          +  S       +   P P KSP  ++
Sbjct: 3520 TQSPPYLGATSPPKDKKRPTPLEI---------GYSSSHLRADPTVQLAPSPPKSPKVLY 3570

Query: 216  -PLTPMA 233
             P++P++
Sbjct: 3571 SPISPLS 3577



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>KLKB1_RAT (P14272) Plasma kallikrein precursor (EC 3.4.21.34) (Plasma|
           prekallikrein) (Kininogenin) (Fletcher factor)
           [Contains: Plasma kallikrein heavy chain; Plasma
           kallikrein light chain]
          Length = 638

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = +3

Query: 132 HKWQKSSKYTAKGIHSVPRPRKSPPCIFPLTPMAGFFSFPARKWTADPAHRCYCLGGRRS 311
           ++W+  S+     + +    R SPP I     ++G+  F  RK   +P H     G    
Sbjct: 245 NEWETESQRNVCFLKTSKSGRPSPP-IIQENAVSGYSLFTCRKARPEPCHFKIYSGVAFE 303

Query: 312 GENMSSTF 335
           GE +++TF
Sbjct: 304 GEELNATF 311


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,232,849
Number of Sequences: 219361
Number of extensions: 2201927
Number of successful extensions: 7390
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7385
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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