Clone Information

BLAST Search Result

Clone Name	rbaal41a12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_481744.1\| Oryza sativa (japonica cultivar-group), mRNA	646	0.0
2	dbj\|AK100576.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	646	0.0
3	gb\|AY112349.1\| Zea mays CL33377_1 mRNA sequence	422	e-115
4	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	212	9e-52
5	dbj\|AP004574.3\| Oryza sativa (japonica cultivar-group) genomic D...	212	9e-52
6	dbj\|AP004706.3\| Oryza sativa (japonica cultivar-group) genomic D...	212	9e-52
7	ref\|NM_111668.2\| Arabidopsis thaliana unknown protein AT3G07890 ...	109	1e-20
8	gb\|BT025552.1\| Arabidopsis thaliana At3g07890 mRNA, complete cds	109	1e-20
9	gb\|AY084232.1\| Arabidopsis thaliana clone 100460 mRNA, complete ...	109	1e-20
10	gb\|AC013483.7\|ATAC013483 Arabidopsis thaliana chromosome III BAC...	64	5e-07
11	emb\|BX682234.9\| Zebrafish DNA sequence from clone CH211-193E13, ...	46	0.13
12	gb\|AC135585.2\| Homo sapiens 12 BAC RP13-646J16 (Roswell Park Can...	42	2.0
13	emb\|AL591070.19\| Mouse DNA sequence from clone RP23-185A18 on ch...	42	2.0
14	emb\|AL669840.5\| Mouse DNA sequence from clone RP23-43J1 on chrom...	42	2.0
15	gb\|AC137627.10\| Homo sapiens 12 BAC RP11-592H6 (Roswell Park Can...	42	2.0
16	gb\|AE015925.1\| Chlamydophila caviae GPIC, complete genome	42	2.0
17	gb\|CP000150.1\| Burkholderia sp. 383 chromosome 3, complete sequence	40	7.8
18	gb\|AC116409.9\| Mus musculus chromosome 3, clone RP24-337P23, com...	40	7.8
19	gb\|BT016038.1\| Drosophila melanogaster RE01051 full insert cDNA	40	7.8
20	gb\|AC160987.4\| Mus musculus BAC clone RP23-248O24 from chromosom...	40	7.8
21	gb\|BC073482.1\| Xenopus laevis hypothetical protein LOC443650, mR...	40	7.8
22	gb\|AC159638.2\| Mus musculus BAC clone RP24-78C16 from chromosome...	40	7.8
23	gb\|AC123957.4\| Mus musculus BAC clone RP23-302N2 from 12, comple...	40	7.8
24	gb\|AC116592.5\| Mus musculus BAC clone RP24-90K3 from 2, complete...	40	7.8
25	emb\|AL590453.10\| Human DNA sequence from clone RP11-294K17 on ch...	40	7.8
26	gb\|AC123517.2\| Oryza sativa japonica cultivar-group chromosome 1...	40	7.8
27	emb\|AL356141.9\| Human DNA sequence from clone RP11-269L3 on chro...	40	7.8
28	emb\|AL031726.23\|HS1018K9 Human DNA sequence from clone RP5-1018K...	40	7.8
29	ref\|XM_796855.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	7.8
30	ref\|XM_775105.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	7.8
31	emb\|BX470090.3\| Mouse DNA sequence from clone RP23-261B11 on chr...	40	7.8
32	emb\|BX537285.6\| Zebrafish DNA sequence from clone DKEY-225N3 in ...	40	7.8
33	ref\|XM_395011.2\| PREDICTED: Apis mellifera similar to ENSANGP000...	40	7.8
34	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	7.8
35	dbj\|AB009048.1\| Arabidopsis thaliana genomic DNA, chromosome 5, ...	40	7.8
36	dbj\|AK067129.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	7.8
37	dbj\|AK062044.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	7.8
38	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	40	7.8
39	emb\|BX004887.2\| Zebrafish DNA sequence from clone CH211-150E4, c...	40	7.8
40	emb\|AL845529.10\| Mouse DNA sequence from clone RP23-276D17 on ch...	40	7.8
41	gb\|AC023481.6\| Homo sapiens chromosome 3 clone RP11-424H6 map 3p...	40	7.8

>ref|XM_481744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2208

 Score =  646 bits (326), Expect = 0.0
 Identities = 485/538 (90%)
 Strand = Plus / Minus

                                                                        
Query: 37   aacgtgagcagctcatcaggctcgtataggtggtgtgcagttgtctgcagaacatcaatt 96
            |||||||| || |||||||| |||||||| || || ||||||||||||| || |||||||
Sbjct: 1756 aacgtgaggagttcatcagggtcgtatagatgatgagcagttgtctgcaaaatatcaatt 1697

                                                                        
Query: 97   acatcaccaatatgttggatgcgtagaagatcgtcttctctcatcttgaaaattgcaaga 156
            ||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 1696 acatcaccaatatgttgaatacgtagtagatcatcttctctcatcttgaaaattgccaga 1637

                                                                        
Query: 157  gcgacatggaacaagacctttgccccttcattgaataaaacatcccacacccgaagtgtt 216
            || ||||||||||| || ||||| ||||||||||||| ||||||||| ||||| || |||
Sbjct: 1636 gcaacatggaacaatacttttgctccttcattgaatagaacatcccatacccggagggtt 1577

                                                                        
Query: 217  gtctccgaaggcaacgttttggagaagagacataagaaccattctgtggcaacaagtgaa 276
            ||||| |||||||| || ||||||||||| || ||||||||||||||||||||||| |||
Sbjct: 1576 gtctctgaaggcaaggtcttggagaagaggcacaagaaccattctgtggcaacaagagaa 1517

                                                                        
Query: 277  acatcaaatcccattgcttcaagatgagcagcaatcctggggcattttttagctagaaga 336
            |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| || 
Sbjct: 1516 acatcaaaccccattgcttcaagatgagcagcaatcctggggcactttttagctaggagg 1457

                                                                        
Query: 337  tctttgaatactctctgctcaacatggcatccagaaagagtatcggtataacaatcactg 396
            |||||||| ||||||||||| |||||||||||||||||| |||| ||||| |||||| ||
Sbjct: 1456 tctttgaaaactctctgctcgacatggcatccagaaagattatcagtatagcaatcattg 1397

                                                                        
Query: 397  acaagaacattctccaagagtacagccagcatccaaaatgcatcttcctctgtcttcata 456
            ||||| ||||| ||||  |||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1396 acaagtacattttccagtagtacagcaagcatccagaatgcatcttcctctgtcttcata 1337

                                                                        
Query: 457  acgagcaataacagagcagctacataatttaaaccctggcaatatccaacttctgaatca 516
            || ||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1336 acaagcaacaacaatgcagctacataatttaaaccctggcaatatccaacttctgagtca 1277

                                                                      
Query: 517  cggaatgagtacccaacaagtacacgtcgaagagatgcctgaccttcctcgctgttca 574
            || |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 1276 cgaaatgagtaaccaacaagcacacgccgaagagatgcctgaccttcctcactgttca 1219

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>dbj|AK100576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105H06, full
            insert sequence
          Length = 2207

 Score =  646 bits (326), Expect = 0.0
 Identities = 485/538 (90%)
 Strand = Plus / Minus

                                                                        
Query: 37   aacgtgagcagctcatcaggctcgtataggtggtgtgcagttgtctgcagaacatcaatt 96
            |||||||| || |||||||| |||||||| || || ||||||||||||| || |||||||
Sbjct: 1755 aacgtgaggagttcatcagggtcgtatagatgatgagcagttgtctgcaaaatatcaatt 1696

                                                                        
Query: 97   acatcaccaatatgttggatgcgtagaagatcgtcttctctcatcttgaaaattgcaaga 156
            ||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 1695 acatcaccaatatgttgaatacgtagtagatcatcttctctcatcttgaaaattgccaga 1636

                                                                        
Query: 157  gcgacatggaacaagacctttgccccttcattgaataaaacatcccacacccgaagtgtt 216
            || ||||||||||| || ||||| ||||||||||||| ||||||||| ||||| || |||
Sbjct: 1635 gcaacatggaacaatacttttgctccttcattgaatagaacatcccatacccggagggtt 1576

                                                                        
Query: 217  gtctccgaaggcaacgttttggagaagagacataagaaccattctgtggcaacaagtgaa 276
            ||||| |||||||| || ||||||||||| || ||||||||||||||||||||||| |||
Sbjct: 1575 gtctctgaaggcaaggtcttggagaagaggcacaagaaccattctgtggcaacaagagaa 1516

                                                                        
Query: 277  acatcaaatcccattgcttcaagatgagcagcaatcctggggcattttttagctagaaga 336
            |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || 
Sbjct: 1515 acatcaaatcccattgcttcaagatgagcagcaatcctggggcactttttagctaggagg 1456

                                                                        
Query: 337  tctttgaatactctctgctcaacatggcatccagaaagagtatcggtataacaatcactg 396
            |||||||| ||||||||||| |||||||||||||||||| |||| ||||| |||||| ||
Sbjct: 1455 tctttgaaaactctctgctcgacatggcatccagaaagattatcagtatagcaatcattg 1396

                                                                        
Query: 397  acaagaacattctccaagagtacagccagcatccaaaatgcatcttcctctgtcttcata 456
            ||||| ||||| ||||  |||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1395 acaagtacattttccagtagtacagcaagcatccagaatgcatcttcctctgtcttcata 1336

                                                                        
Query: 457  acgagcaataacagagcagctacataatttaaaccctggcaatatccaacttctgaatca 516
            || ||||| ||||  ||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1335 acaagcaacaacaatgcaactacataatttaaaccctggcaatatccaacttctgagtca 1276

                                                                      
Query: 517  cggaatgagtacccaacaagtacacgtcgaagagatgcctgaccttcctcgctgttca 574
            || |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 1275 cgaaatgagtaaccaacaagcacacgccgaagagatgcctgaccttcctcactgttca 1218

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>gb|AY112349.1| Zea mays CL33377_1 mRNA sequence
          Length = 934

 Score =  422 bits (213), Expect = e-115
 Identities = 378/433 (87%)
 Strand = Plus / Plus

                                                                       
Query: 98  catcaccaatatgttggatgcgtagaagatcgtcttctctcatcttgaaaattgcaagag 157
           ||||||| |||||||||||||| || ||||| ||||||| ||||||||||||||| ||||
Sbjct: 495 catcaccgatatgttggatgcgcagtagatcatcttctcgcatcttgaaaattgcgagag 554

                                                                       
Query: 158 cgacatggaacaagacctttgccccttcattgaataaaacatcccacacccgaagtgttg 217
           | ||| ||||||| || || || |||||||||||||| | |||||| |||||||||||||
Sbjct: 555 caacacggaacaaaacattggctccttcattgaataatatatcccatacccgaagtgttg 614

                                                                       
Query: 218 tctccgaaggcaacgttttggagaagagacataagaaccattctgtggcaacaagtgaaa 277
           |||| |||||||   | || |||||||| || || | ||||||||| |||||||||||||
Sbjct: 615 tctctgaaggcaggctctttgagaagaggcacaaaacccattctgtagcaacaagtgaaa 674

                                                                       
Query: 278 catcaaatcccattgcttcaagatgagcagcaatcctggggcattttttagctagaagat 337
           ||||||| |||||||||||||| |||||||||||||| || || || ||||| || ||||
Sbjct: 675 catcaaaccccattgcttcaaggtgagcagcaatccttggacacttcttagccaggagat 734

                                                                       
Query: 338 ctttgaatactctctgctcaacatggcatccagaaagagtatcggtataacaatcactga 397
           ||||||| || |||||||| ||||| |||||||||||||| || ||||| ||||||||||
Sbjct: 735 ctttgaacaccctctgctcgacatgacatccagaaagagtgtcagtatagcaatcactga 794

                                                                       
Query: 398 caagaacattctccaagagtacagccagcatccaaaatgcatcttcctctgtcttcataa 457
           |||| |||||||| | ||||||||| ||||||||||||||||| |||||||||||||| |
Sbjct: 795 caagtacattctcaaggagtacagcaagcatccaaaatgcatcctcctctgtcttcatca 854

                                                                       
Query: 458 cgagcaataacagagcagctacataatttaaaccctggcaatatccaacttctgaatcac 517
           | ||||| || || ||||||||||| |||| ||||||||| || ||||||||||||||||
Sbjct: 855 caagcaacaagagtgcagctacatagtttagaccctggcagtacccaacttctgaatcac 914

                        
Query: 518 ggaatgagtaccc 530
           |||||||||||||
Sbjct: 915 ggaatgagtaccc 927

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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  212 bits (107), Expect = 9e-52
 Identities = 164/183 (89%)
 Strand = Plus / Plus

                                                                            
Query: 312      cctggggcattttttagctagaagatctttgaatactctctgctcaacatggcatccaga 371
                ||||||||| ||||||||||| || |||||||| ||||||||||| ||||||||||||||
Sbjct: 15157735 cctggggcactttttagctaggaggtctttgaaaactctctgctcgacatggcatccaga 15157794

                                                                            
Query: 372      aagagtatcggtataacaatcactgacaagaacattctccaagagtacagccagcatcca 431
                |||| |||| ||||| |||||| ||||||| ||||| ||||  |||||||| ||||||||
Sbjct: 15157795 aagattatcagtatagcaatcattgacaagtacattttccagtagtacagcaagcatcca 15157854

                                                                            
Query: 432      aaatgcatcttcctctgtcttcataacgagcaataacagagcagctacataatttaaacc 491
                 |||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||
Sbjct: 15157855 gaatgcatcttcctctgtcttcataacaagcaacaacaatgcagctacataatttaaacc 15157914

                   
Query: 492      ctg 494
                |||
Sbjct: 15157915 ctg 15157917



 Score =  137 bits (69), Expect = 4e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                            
Query: 223      gaaggcaacgttttggagaagagacataagaaccattctgtggcaacaagtgaaacatca 282
                |||||||| || ||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 15157527 gaaggcaaggtcttggagaagaggcacaagaaccattctgtggcaacaagagaaacatca 15157586

                                                 
Query: 283      aatcccattgcttcaagatgagcagcaatcctg 315
                || ||||||||||||||||||||||||||||||
Sbjct: 15157587 aaccccattgcttcaagatgagcagcaatcctg 15157619



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                            
Query: 491      cctggcaatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagag 550
                |||||||||||||||||||||| ||||| |||||||| |||||||| ||||| |||||||
Sbjct: 15157988 cctggcaatatccaacttctgagtcacgaaatgagtaaccaacaagcacacgccgaagag 15158047

                                        
Query: 551      atgcctgaccttcctcgctgttca 574
                |||||||||||||||| |||||||
Sbjct: 15158048 atgcctgaccttcctcactgttca 15158071



 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                            
Query: 39       cgtgagcagctcatcaggctcgtataggtggtgtgcagttgtctgcagaacatcaattac 98
                |||||| || |||||||| |||||||| || || ||||||||||||| || |||||||||
Sbjct: 15157134 cgtgaggagttcatcagggtcgtatagatgatgagcagttgtctgcaaaatatcaattac 15157193

                                                            
Query: 99       atcaccaatatgttggatgcgtagaagatcgtcttctctcatct 142
                ||||||||||||||| || ||||| ||||| |||||||||||||
Sbjct: 15157194 atcaccaatatgttgaatacgtagtagatcatcttctctcatct 15157237



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                            
Query: 141      cttgaaaattgcaagagcgacatggaacaagacctttgccccttcattgaataaaacatc 200
                |||||||||||| ||||| ||||||||||| || ||||| ||||||||||||| ||||||
Sbjct: 15157342 cttgaaaattgccagagcaacatggaacaatacttttgctccttcattgaatagaacatc 15157401

                                    
Query: 201      ccacacccgaagtgttgtct 220
                ||| ||||| || |||||||
Sbjct: 15157402 ccatacccggagggttgtct 15157421

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>dbj|AP004574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0702G08
          Length = 144596

 Score =  212 bits (107), Expect = 9e-52
 Identities = 164/183 (89%)
 Strand = Plus / Plus

                                                                        
Query: 312  cctggggcattttttagctagaagatctttgaatactctctgctcaacatggcatccaga 371
            ||||||||| ||||||||||| || |||||||| ||||||||||| ||||||||||||||
Sbjct: 5560 cctggggcactttttagctaggaggtctttgaaaactctctgctcgacatggcatccaga 5619

                                                                        
Query: 372  aagagtatcggtataacaatcactgacaagaacattctccaagagtacagccagcatcca 431
            |||| |||| ||||| |||||| ||||||| ||||| ||||  |||||||| ||||||||
Sbjct: 5620 aagattatcagtatagcaatcattgacaagtacattttccagtagtacagcaagcatcca 5679

                                                                        
Query: 432  aaatgcatcttcctctgtcttcataacgagcaataacagagcagctacataatttaaacc 491
             |||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||
Sbjct: 5680 gaatgcatcttcctctgtcttcataacaagcaacaacaatgcagctacataatttaaacc 5739

               
Query: 492  ctg 494
            |||
Sbjct: 5740 ctg 5742



 Score =  137 bits (69), Expect = 4e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                        
Query: 223  gaaggcaacgttttggagaagagacataagaaccattctgtggcaacaagtgaaacatca 282
            |||||||| || ||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 5352 gaaggcaaggtcttggagaagaggcacaagaaccattctgtggcaacaagagaaacatca 5411

                                             
Query: 283  aatcccattgcttcaagatgagcagcaatcctg 315
            || ||||||||||||||||||||||||||||||
Sbjct: 5412 aaccccattgcttcaagatgagcagcaatcctg 5444



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                        
Query: 491  cctggcaatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagag 550
            |||||||||||||||||||||| ||||| |||||||| |||||||| ||||| |||||||
Sbjct: 5813 cctggcaatatccaacttctgagtcacgaaatgagtaaccaacaagcacacgccgaagag 5872

                                    
Query: 551  atgcctgaccttcctcgctgttca 574
            |||||||||||||||| |||||||
Sbjct: 5873 atgcctgaccttcctcactgttca 5896



 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                        
Query: 39   cgtgagcagctcatcaggctcgtataggtggtgtgcagttgtctgcagaacatcaattac 98
            |||||| || |||||||| |||||||| || || ||||||||||||| || |||||||||
Sbjct: 4959 cgtgaggagttcatcagggtcgtatagatgatgagcagttgtctgcaaaatatcaattac 5018

                                                        
Query: 99   atcaccaatatgttggatgcgtagaagatcgtcttctctcatct 142
            ||||||||||||||| || ||||| ||||| |||||||||||||
Sbjct: 5019 atcaccaatatgttgaatacgtagtagatcatcttctctcatct 5062



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                        
Query: 141  cttgaaaattgcaagagcgacatggaacaagacctttgccccttcattgaataaaacatc 200
            |||||||||||| ||||| ||||||||||| || ||||| ||||||||||||| ||||||
Sbjct: 5167 cttgaaaattgccagagcaacatggaacaatacttttgctccttcattgaatagaacatc 5226

                                
Query: 201  ccacacccgaagtgttgtct 220
            ||| ||||| || |||||||
Sbjct: 5227 ccatacccggagggttgtct 5246

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>dbj|AP004706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0683E12
          Length = 165766

 Score =  212 bits (107), Expect = 9e-52
 Identities = 164/183 (89%)
 Strand = Plus / Plus

                                                                          
Query: 312    cctggggcattttttagctagaagatctttgaatactctctgctcaacatggcatccaga 371
              ||||||||| ||||||||||| || |||||||| ||||||||||| ||||||||||||||
Sbjct: 147987 cctggggcactttttagctaggaggtctttgaaaactctctgctcgacatggcatccaga 148046

                                                                          
Query: 372    aagagtatcggtataacaatcactgacaagaacattctccaagagtacagccagcatcca 431
              |||| |||| ||||| |||||| ||||||| ||||| ||||  |||||||| ||||||||
Sbjct: 148047 aagattatcagtatagcaatcattgacaagtacattttccagtagtacagcaagcatcca 148106

                                                                          
Query: 432    aaatgcatcttcctctgtcttcataacgagcaataacagagcagctacataatttaaacc 491
               |||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||
Sbjct: 148107 gaatgcatcttcctctgtcttcataacaagcaacaacaatgcagctacataatttaaacc 148166

                 
Query: 492    ctg 494
              |||
Sbjct: 148167 ctg 148169



 Score =  137 bits (69), Expect = 4e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                          
Query: 223    gaaggcaacgttttggagaagagacataagaaccattctgtggcaacaagtgaaacatca 282
              |||||||| || ||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 147779 gaaggcaaggtcttggagaagaggcacaagaaccattctgtggcaacaagagaaacatca 147838

                                               
Query: 283    aatcccattgcttcaagatgagcagcaatcctg 315
              || ||||||||||||||||||||||||||||||
Sbjct: 147839 aaccccattgcttcaagatgagcagcaatcctg 147871



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                          
Query: 491    cctggcaatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagag 550
              |||||||||||||||||||||| ||||| |||||||| |||||||| ||||| |||||||
Sbjct: 148240 cctggcaatatccaacttctgagtcacgaaatgagtaaccaacaagcacacgccgaagag 148299

                                      
Query: 551    atgcctgaccttcctcgctgttca 574
              |||||||||||||||| |||||||
Sbjct: 148300 atgcctgaccttcctcactgttca 148323



 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                          
Query: 39     cgtgagcagctcatcaggctcgtataggtggtgtgcagttgtctgcagaacatcaattac 98
              |||||| || |||||||| |||||||| || || ||||||||||||| || |||||||||
Sbjct: 147386 cgtgaggagttcatcagggtcgtatagatgatgagcagttgtctgcaaaatatcaattac 147445

                                                          
Query: 99     atcaccaatatgttggatgcgtagaagatcgtcttctctcatct 142
              ||||||||||||||| || ||||| ||||| |||||||||||||
Sbjct: 147446 atcaccaatatgttgaatacgtagtagatcatcttctctcatct 147489



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                          
Query: 141    cttgaaaattgcaagagcgacatggaacaagacctttgccccttcattgaataaaacatc 200
              |||||||||||| ||||| ||||||||||| || ||||| ||||||||||||| ||||||
Sbjct: 147594 cttgaaaattgccagagcaacatggaacaatacttttgctccttcattgaatagaacatc 147653

                                  
Query: 201    ccacacccgaagtgttgtct 220
              ||| ||||| || |||||||
Sbjct: 147654 ccatacccggagggttgtct 147673

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>ref|NM_111668.2| Arabidopsis thaliana unknown protein AT3G07890 mRNA, complete cds
          Length = 1665

 Score =  109 bits (55), Expect = 1e-20
 Identities = 334/427 (78%)
 Strand = Plus / Minus

                                                                        
Query: 137  tcatcttgaaaattgcaagagcgacatggaacaagacctttgccccttcattgaataaaa 196
            |||||||||| ||||| | |||  ||||||| |  ||||| || ||||||| ||| |  |
Sbjct: 1091 tcatcttgaatattgctaaagctgcatggaatagaaccttcgctccttcatagaaaagta 1032

                                                                        
Query: 197  catcccacacccgaagtgttgtctccgaaggcaacgttttggagaagagacataagaacc 256
            ||||||||||||  || |||||||| ||||| |   |||| |||||||| ||||  ||||
Sbjct: 1031 catcccacacccttagagttgtctctgaaggaaggcttttagagaagaggcatagaaacc 972

                                                                        
Query: 257  attctgtggcaacaagtgaaacatcaaatcccattgcttcaagatgagcagcaatcctgg 316
            |||| ||||| ||||| ||||||||||| |||||  |||||||||||| ||| || |  |
Sbjct: 971  attcagtggctacaagggaaacatcaaagcccatatcttcaagatgagtagctattcgag 912

                                                                        
Query: 317  ggcattttttagctagaagatctttgaatactctctgctcaacatggcatccagaaagag 376
              |||||||  || || | ||||||||| || | |||||||||||| |||||||| |   
Sbjct: 911  aacatttttgggcaagcaaatctttgaaaacccgctgctcaacatgacatccagataagt 852

                                                                        
Query: 377  tatcggtataacaatcactgacaagaacattctccaagagtacagccagcatccaaaatg 436
            |    || |||||||||| ||| |  || || ||||| || || || |||||||| ||||
Sbjct: 851  tggttgtgtaacaatcacggactaatacgttttccaaaaggaccgctagcatccagaatg 792

                                                                        
Query: 437  catcttcctctgtcttcataacgagcaataacagagcagctacataatttaaaccctggc 496
            | ||||| ||||||||||| || || ||||  |  || || || || |||| |||||| |
Sbjct: 791  cgtcttcttctgtcttcatgacaagtaatagtaacgctgcaacgtagtttagaccctgac 732

                                                                        
Query: 497  aatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagagatgcct 556
            |||| ||||| ||||||||||| || || ||||||||||| |||||||| ||||  || |
Sbjct: 731  aatagccaacatctgaatcacgaaaggaatacccaacaagcacacgtcgtagagcagcat 672

                   
Query: 557  gaccttc 563
            |||||||
Sbjct: 671  gaccttc 665

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>gb|BT025552.1| Arabidopsis thaliana At3g07890 mRNA, complete cds
          Length = 1203

 Score =  109 bits (55), Expect = 1e-20
 Identities = 334/427 (78%)
 Strand = Plus / Minus

                                                                       
Query: 137 tcatcttgaaaattgcaagagcgacatggaacaagacctttgccccttcattgaataaaa 196
           |||||||||| ||||| | |||  ||||||| |  ||||| || ||||||| ||| |  |
Sbjct: 964 tcatcttgaatattgctaaagctgcatggaatagaaccttcgctccttcatagaaaagta 905

                                                                       
Query: 197 catcccacacccgaagtgttgtctccgaaggcaacgttttggagaagagacataagaacc 256
           ||||||||||||  || |||||||| ||||| |   |||| |||||||| ||||  ||||
Sbjct: 904 catcccacacccttagagttgtctctgaaggaaggcttttagagaagaggcatagaaacc 845

                                                                       
Query: 257 attctgtggcaacaagtgaaacatcaaatcccattgcttcaagatgagcagcaatcctgg 316
           |||| ||||| ||||| ||||||||||| |||||  |||||||||||| ||| || |  |
Sbjct: 844 attcagtggctacaagggaaacatcaaagcccatatcttcaagatgagtagctattcgag 785

                                                                       
Query: 317 ggcattttttagctagaagatctttgaatactctctgctcaacatggcatccagaaagag 376
             |||||||  || || | ||||||||| || | |||||||||||| |||||||| |   
Sbjct: 784 aacatttttgggcaagcaaatctttgaaaacccgctgctcaacatgacatccagataagt 725

                                                                       
Query: 377 tatcggtataacaatcactgacaagaacattctccaagagtacagccagcatccaaaatg 436
           |    || |||||||||| ||| |  || || ||||| || || || |||||||| ||||
Sbjct: 724 tggttgtgtaacaatcacggactaatacgttttccaaaaggaccgctagcatccagaatg 665

                                                                       
Query: 437 catcttcctctgtcttcataacgagcaataacagagcagctacataatttaaaccctggc 496
           | ||||| ||||||||||| || || ||||  |  || || || || |||| |||||| |
Sbjct: 664 cgtcttcttctgtcttcatgacaagtaatagtaacgctgcaacgtagtttagaccctgac 605

                                                                       
Query: 497 aatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagagatgcct 556
           |||| ||||| ||||||||||| || || ||||||||||| |||||||| ||||  || |
Sbjct: 604 aatagccaacatctgaatcacgaaaggaatacccaacaagcacacgtcgtagagcagcat 545

                  
Query: 557 gaccttc 563
           |||||||
Sbjct: 544 gaccttc 538

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>gb|AY084232.1| Arabidopsis thaliana clone 100460 mRNA, complete sequence
          Length = 1456

 Score =  109 bits (55), Expect = 1e-20
 Identities = 334/427 (78%)
 Strand = Plus / Minus

                                                                        
Query: 137  tcatcttgaaaattgcaagagcgacatggaacaagacctttgccccttcattgaataaaa 196
            |||||||||| ||||| | |||  ||||||| |  ||||| || ||||||| ||| |  |
Sbjct: 1008 tcatcttgaatattgctaaagctgcatggaatagaaccttcgctccttcatagaaaagta 949

                                                                        
Query: 197  catcccacacccgaagtgttgtctccgaaggcaacgttttggagaagagacataagaacc 256
            ||||||||||||  || |||||||| ||||| |   |||| |||||||| ||||  ||||
Sbjct: 948  catcccacacccttagagttgtctctgaaggaaggcttttagagaagaggcatagaaacc 889

                                                                        
Query: 257  attctgtggcaacaagtgaaacatcaaatcccattgcttcaagatgagcagcaatcctgg 316
            |||| ||||| ||||| ||||||||||| |||||  |||||||||||| ||| || |  |
Sbjct: 888  attcagtggctacaagggaaacatcaaagcccatatcttcaagatgagtagctattcgag 829

                                                                        
Query: 317  ggcattttttagctagaagatctttgaatactctctgctcaacatggcatccagaaagag 376
              |||||||  || || | ||||||||| || | |||||||||||| |||||||| |   
Sbjct: 828  aacatttttgggcaagcaaatctttgaaaacccgctgctcaacatgacatccagataagt 769

                                                                        
Query: 377  tatcggtataacaatcactgacaagaacattctccaagagtacagccagcatccaaaatg 436
            |    || |||||||||| ||| |  || || ||||| || || || |||||||| ||||
Sbjct: 768  tggttgtgtaacaatcacggactaatacgttttccaaaaggaccgctagcatccagaatg 709

                                                                        
Query: 437  catcttcctctgtcttcataacgagcaataacagagcagctacataatttaaaccctggc 496
            | ||||| ||||||||||| || || ||||  |  || || || || |||| |||||| |
Sbjct: 708  cgtcttcttctgtcttcatgacaagtaatagtaacgctgcaacgtagtttagaccctgac 649

                                                                        
Query: 497  aatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagagatgcct 556
            |||| ||||| ||||||||||| || || ||||||||||| |||||||| ||||  || |
Sbjct: 648  aatagccaacatctgaatcacgaaaggaatacccaacaagcacacgtcgtagagcagcat 589

                   
Query: 557  gaccttc 563
            |||||||
Sbjct: 588  gaccttc 582

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>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence,
             complete sequence
          Length = 121054

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                         
Query: 233   ttttggagaagagacataagaaccattctgtggcaacaagtgaaacatcaaatcccattg 292
             |||| |||||||| ||||  |||||||| ||||| ||||| ||||||||||| |||||  
Sbjct: 68266 ttttagagaagaggcatagaaaccattcagtggctacaagggaaacatcaaagcccatat 68325

                         
Query: 293   cttcaagatgag 304
             ||||||||||||
Sbjct: 68326 cttcaagatgag 68337



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                         
Query: 491   cctggcaatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagag 550
             |||| ||||| ||||| ||||||||||| || || ||||||||||| |||||||| ||||
Sbjct: 68691 cctgacaatagccaacatctgaatcacgaaaggaatacccaacaagcacacgtcgtagag 68750

                          
Query: 551   atgcctgaccttc 563
               || ||||||||
Sbjct: 68751 cagcatgaccttc 68763



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 424   agcatccaaaatgcatcttcctctgtcttcat 455
             |||||||| ||||| ||||| |||||||||||
Sbjct: 68540 agcatccagaatgcgtcttcttctgtcttcat 68571



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 336   atctttgaatactctctgctcaacatggcatccaga 371
             ||||||||| || | |||||||||||| ||||||||
Sbjct: 68452 atctttgaaaacccgctgctcaacatgacatccaga 68487

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>emb|BX682234.9| Zebrafish DNA sequence from clone CH211-193E13, complete sequence
          Length = 165319

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 241    aagagacataagaaccattctgt 263
              |||||||||||||||||||||||
Sbjct: 121976 aagagacataagaaccattctgt 121954

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>gb|AC135585.2| Homo sapiens 12 BAC RP13-646J16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 35700

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 276   aacatcaaatcccattgcttc 296
             |||||||||||||||||||||
Sbjct: 29158 aacatcaaatcccattgcttc 29178

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>emb|AL591070.19| Mouse DNA sequence from clone RP23-185A18 on chromosome 11 Contains the
              3' end of a novel gene, Traf4 gene for Tnf receptor
              associated factor 4, the Nek8 gene for NIMA (never in
              mitosis gene a)-related expressed kinase 8, six novel
              genes, the Rpl23a gene for ribosomal protein L23a, the
              Rab34 gene for RAB34 member of RAS oncogene family, the
              Supt6h gene for suppressor of Ty 6 homolog (S. cerevisiae),
              the Sdf2 gene for stromal cell derived factor 2, the Spag5
              gene for sperm associated antigen 5, the Aldo3 gene for
              aldolase 3 C isoform, the Pigs gene for
              phosphatidylinositol glycan class S and the Unc119 gene for
              unc-119 homolog (C. elegans), complete sequence
          Length = 233242

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     ctgcagaacatcaattacatc 101
              |||||||||||||||||||||
Sbjct: 232652 ctgcagaacatcaattacatc 232672

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>emb|AL669840.5| Mouse DNA sequence from clone RP23-43J1 on chromosome 11, complete
              sequence
          Length = 103555

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 81     ctgcagaacatcaattacatc 101
              |||||||||||||||||||||
Sbjct: 102146 ctgcagaacatcaattacatc 102126

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>gb|AC137627.10| Homo sapiens 12 BAC RP11-592H6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 155345

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 276    aacatcaaatcccattgcttc 296
              |||||||||||||||||||||
Sbjct: 106381 aacatcaaatcccattgcttc 106361

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>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 179    ccccttcattgaataaaacat 199
              |||||||||||||||||||||
Sbjct: 116308 ccccttcattgaataaaacat 116288

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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    gagcagcaatcctggggcat 321
              ||||||||||||||||||||
Sbjct: 711229 gagcagcaatcctggggcat 711210

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>gb|AC116409.9| Mus musculus chromosome 3, clone RP24-337P23, complete sequence
          Length = 162232

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    tttggagaagagacataaga 253
              ||||||||||||||||||||
Sbjct: 128000 tttggagaagagacataaga 127981

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>gb|BT016038.1| Drosophila melanogaster RE01051 full insert cDNA
          Length = 3932

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 gcaacaagtgaaacatcaaa 284
           ||||||||||||||||||||
Sbjct: 705 gcaacaagtgaaacatcaaa 724

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>gb|AC160987.4| Mus musculus BAC clone RP23-248O24 from chromosome 16, complete
             sequence
          Length = 202729

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   tacagccagcatccaaaatg 436
             ||||||||||||||||||||
Sbjct: 86558 tacagccagcatccaaaatg 86539

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>gb|BC073482.1| Xenopus laevis hypothetical protein LOC443650, mRNA (cDNA clone
            IMAGE:5569991), partial cds
          Length = 3201

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 229  aacgttttggagaagagaca 248
            ||||||||||||||||||||
Sbjct: 3075 aacgttttggagaagagaca 3094

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>gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome 12, complete sequence
          Length = 190196

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 136    ctcatcttgaaaattgcaagagcgacat 163
              ||||||||||||||| ||||||| ||||
Sbjct: 185317 ctcatcttgaaaatttcaagagctacat 185290

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>gb|AC123957.4| Mus musculus BAC clone RP23-302N2 from 12, complete sequence
          Length = 206661

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 136    ctcatcttgaaaattgcaagagcgacat 163
              ||||||||||||||| ||||||| ||||
Sbjct: 195714 ctcatcttgaaaatttcaagagctacat 195741

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>gb|AC116592.5| Mus musculus BAC clone RP24-90K3 from 2, complete sequence
          Length = 238657

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   agagtacagccagcatccaa 432
             ||||||||||||||||||||
Sbjct: 78714 agagtacagccagcatccaa 78733

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>emb|AL590453.10| Human DNA sequence from clone RP11-294K17 on chromosome 1 Contains the
             3' end of a novel gene, complete sequence
          Length = 187461

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   gtcttctctcatcttgaaaa 148
             ||||||||||||||||||||
Sbjct: 77928 gtcttctctcatcttgaaaa 77909

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>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09,
             complete sequence
          Length = 135363

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   caagatgagcagcaatcctg 315
             ||||||||||||||||||||
Sbjct: 47441 caagatgagcagcaatcctg 47422

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>emb|AL356141.9| Human DNA sequence from clone RP11-269L3 on chromosome 10, complete
             sequence
          Length = 87871

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   agaagagacataagaaccat 258
             ||||||||||||||||||||
Sbjct: 82305 agaagagacataagaaccat 82324

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>emb|AL031726.23|HS1018K9 Human DNA sequence from clone RP5-1018K9 on chromosome 1q23.2-24.3
              Contains the 5' end of a novel gene, a novel gene, the
              ATP1B1 gene for Na+/K+ transporting ATPase beta 1
              polypeptide, the 3' end of the NME7 gene for protein
              expressed in non-metastatic cells 7 (nucleoside-diphosphate
              kinase) and a CpG island, complete sequence
          Length = 153624

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    aaccattctgtggcaacaag 272
              ||||||||||||||||||||
Sbjct: 118996 aaccattctgtggcaacaag 119015

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>ref|XM_796855.1| PREDICTED: Strongylocentrotus purpuratus similar to DNA replication
            licensing factor MCM5 (CDC46 homolog) (P1-CDC46),
            transcript variant 2 (LOC578688), mRNA
          Length = 2252

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  gatcgtcttctctcatcttg 144
            ||||||||||||||||||||
Sbjct: 1404 gatcgtcttctctcatcttg 1385

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>ref|XM_775105.1| PREDICTED: Strongylocentrotus purpuratus similar to DNA replication
            licensing factor MCM5 (CDC46 homolog) (P1-CDC46),
            transcript variant 1 (LOC578688), mRNA
          Length = 2249

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  gatcgtcttctctcatcttg 144
            ||||||||||||||||||||
Sbjct: 1401 gatcgtcttctctcatcttg 1382

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>emb|BX470090.3| Mouse DNA sequence from clone RP23-261B11 on chromosome 11, complete
            sequence
          Length = 25819

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  tgctcaacatggcatccaga 371
            ||||||||||||||||||||
Sbjct: 2847 tgctcaacatggcatccaga 2866

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>emb|BX537285.6| Zebrafish DNA sequence from clone DKEY-225N3 in linkage group 24,
             complete sequence
          Length = 150691

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     gttgtctggagccatcttgt 28
             ||||||||||||||||||||
Sbjct: 46469 gttgtctggagccatcttgt 46488

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>ref|XM_395011.2| PREDICTED: Apis mellifera similar to ENSANGP00000017555
           (LOC411540), mRNA
          Length = 3408

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 420 agccagcatccaaaatgcatcttcctct 447
           ||||| ||||||||| ||||||||||||
Sbjct: 978 agccatcatccaaaaagcatcttcctct 951

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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 296     caagatgagcagcaatcctg 315
               ||||||||||||||||||||
Sbjct: 5991358 caagatgagcagcaatcctg 5991339

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>dbj|AB009048.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15E6
          Length = 71736

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   ttctctcatcttgaaaattg 151
             ||||||||||||||||||||
Sbjct: 52368 ttctctcatcttgaaaattg 52387

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>dbj|AK067129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095E13, full
            insert sequence
          Length = 2549

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 296  caagatgagcagcaatcctg 315
            ||||||||||||||||||||
Sbjct: 1881 caagatgagcagcaatcctg 1900

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>dbj|AK062044.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A08, full
            insert sequence
          Length = 1791

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 296  caagatgagcagcaatcctg 315
            ||||||||||||||||||||
Sbjct: 1123 caagatgagcagcaatcctg 1142

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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 296     caagatgagcagcaatcctg 315
               ||||||||||||||||||||
Sbjct: 6057835 caagatgagcagcaatcctg 6057816

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>emb|BX004887.2| Zebrafish DNA sequence from clone CH211-150E4, complete sequence
          Length = 186834

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     gttgtctggagccatcttgt 28
             ||||||||||||||||||||
Sbjct: 43449 gttgtctggagccatcttgt 43468

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>emb|AL845529.10| Mouse DNA sequence from clone RP23-276D17 on chromosome 2, complete
              sequence
          Length = 166971

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    agagtacagccagcatccaa 432
              ||||||||||||||||||||
Sbjct: 141334 agagtacagccagcatccaa 141315

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>gb|AC023481.6| Homo sapiens chromosome 3 clone RP11-424H6 map 3p, complete sequence
          Length = 184065

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 434   atgcatcttcctctgtcttcataa 457
             ||||||||| ||||||||||||||
Sbjct: 58722 atgcatctttctctgtcttcataa 58745


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,160,710
Number of Sequences: 3902068
Number of extensions: 5160710
Number of successful extensions: 92582
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92421
Number of HSP's gapped (non-prelim): 160
length of query: 576
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 553
effective length of database: 17,143,297,704
effective search space: 9480243630312
effective search space used: 9480243630312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result