>dbj|AK070682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B02, full
            insert sequence
          Length = 1913

 Score =  101 bits (51), Expect = 1e-18
 Identities = 102/119 (85%)
 Strand = Plus / Minus

                                                                        
Query: 189  aggtacgtccacaggaagatcaccgagcactcctcctgcccgacgtcgaacagctgcgcc 248
            ||||| ||||||| ||||||||| ||||| ||||| || || || || |||||||| |||
Sbjct: 1310 aggtaagtccacaagaagatcactgagcattcctcttgaccaacatcaaacagctgagcc 1251

                                                                       
Query: 249  atggtcccgatgttcatggcgggcggcagcgcaaactgcaacatcagcacgtaccggta 307
            ||||| ||||||||||| || || |||||||| ||||||| |||||||||||| |||||
Sbjct: 1250 atggttccgatgttcattgcaggtggcagcgcgaactgcatcatcagcacgtagcggta 1192

>ref|XM_477614.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 861

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 97/119 (81%)
 Strand = Plus / Minus

                                                                       
Query: 189 aggtacgtccacaggaagatcaccgagcactcctcctgcccgacgtcgaacagctgcgcc 248
           ||||| |||||||| || ||||| ||||| ||||||||  | || || ||||| || |||
Sbjct: 710 aggtaagtccacagaaatatcactgagcattcctcctgggcaacatcaaacagttgagcc 651

                                                                      
Query: 249 atggtcccgatgttcatggcgggcggcagcgcaaactgcaacatcagcacgtaccggta 307
           ||||| || ||  |||| || || |||||||| ||||||| |||||||||||| |||||
Sbjct: 650 atggttccaatagtcattgcaggtggcagcgcgaactgcatcatcagcacgtagcggta 592

>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0043I04, complete sequence
          Length = 145191

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 255   ccgatgttcatggcgggcggcagcgcaaactgcaacatcagcacgtaccggta 307
             ||||||||||| || || |||||||| ||||||| |||||||||||| |||||
Sbjct: 12057 ccgatgttcattgcaggtggcagcgcgaactgcatcatcagcacgtagcggta 12005



 Score = 46.1 bits (23), Expect = 0.070
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 273   ggcagcgcaaactgcaacatcagcacgtaccggta 307
             |||||||| ||||||| |||||||||||| |||||
Sbjct: 54160 ggcagcgcgaactgcatcatcagcacgtagcggta 54126



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 255   ccgatgttcatggcgggcggcagcgcaaactgcaacatcagcacgtaccggta 307
             ||||||||||| || || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 19582 ccgatgttcattgcaggtggcagtgcgaacagcatcatcagcacgtagcggta 19530

>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05,
              complete sequence
          Length = 141200

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                   
Query: 255    ccgatgttcatggcgggcggcagcgcaaactgcaacatcagcacgtaccggta 307
              ||||||||||| || || |||||||| ||||||| |||||||||||| |||||
Sbjct: 122663 ccgatgttcattgcaggtggcagcgcgaactgcatcatcagcacgtagcggta 122611



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                   
Query: 255    ccgatgttcatggcgggcggcagcgcaaactgcaacatcagcacgtaccggta 307
              ||||||||||| || || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 130188 ccgatgttcattgcaggtggcagtgcgaacagcatcatcagcacgtagcggta 130136

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 255      ccgatgttcatggcgggcggcagcgcaaactgcaacatcagcacgtaccggta 307
                ||||||||||| || || |||||||| ||||||| |||||||||||| |||||
Sbjct: 21666037 ccgatgttcattgcaggtggcagcgcgaactgcatcatcagcacgtagcggta 21665985



 Score = 46.1 bits (23), Expect = 0.070
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 273      ggcagcgcaaactgcaacatcagcacgtaccggta 307
                |||||||| ||||||| |||||||||||| |||||
Sbjct: 21708140 ggcagcgcgaactgcatcatcagcacgtagcggta 21708106



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                     
Query: 255      ccgatgttcatggcgggcggcagcgcaaactgcaacatcagcacgtaccggta 307
                ||||||||||| || || ||||| || ||| ||| |||||||||||| |||||
Sbjct: 21673562 ccgatgttcattgcaggtggcagtgcgaacagcatcatcagcacgtagcggta 21673510

>gb|AC164418.10| Mus musculus chromosome 1, clone RP23-431J24, complete sequence
          Length = 189965

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 51    gaacactttacaaatggaatcta 73
             |||||||||||||||||||||||
Sbjct: 97730 gaacactttacaaatggaatcta 97752

>gb|AC119842.9| Mus musculus chromosome 1, clone RP23-277F23, complete sequence
          Length = 175179

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 51     gaacactttacaaatggaatcta 73
              |||||||||||||||||||||||
Sbjct: 137866 gaacactttacaaatggaatcta 137888

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 273      ggcagcgcaaactgcaacatcagcacgtaccggta 307
                |||||||| ||||||| |||||||||||| |||||
Sbjct: 11882252 ggcagcgcgaactgcatcatcagcacgtagcggta 11882218

>dbj|AP006343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1032F05
          Length = 151412

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 273    ggcagcgcaaactgcaacatcagcacgtaccggta 307
              |||||||| ||||||| |||||||||||| |||||
Sbjct: 114552 ggcagcgcgaactgcatcatcagcacgtagcggta 114518

>dbj|AP006529.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1114D08
          Length = 148354

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 273   ggcagcgcaaactgcaacatcagcacgtaccggta 307
             |||||||| ||||||| |||||||||||| |||||
Sbjct: 13293 ggcagcgcgaactgcatcatcagcacgtagcggta 13259

>ref|NM_125995.1| Arabidopsis thaliana auxin:hydrogen symporter AT5G65980 mRNA,
            complete cds
          Length = 1188

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 189  aggtacgtccacaggaagatcaccgagcactcctcctgcccgacgtcgaacagctgcgcc 248
            ||||| ||||||| |||||| ||||||||||| || ||  | ||||||||||| || |||
Sbjct: 1130 aggtaggtccacaagaagatgaccgagcactcatcttgagccacgtcgaacagttgtgcc 1071

              
Query: 249  at 250
            ||
Sbjct: 1070 at 1069

>gb|AC124408.4| Mus musculus BAC clone RP24-262E22 from chromosome 14, complete
             sequence
          Length = 159082

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 124   gcctgcttcaggagaggatggacatg 149
             ||||||||||||||||||||| ||||
Sbjct: 64991 gcctgcttcaggagaggatgggcatg 65016

>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 170     gagcgcgaccgcggcgacgagg 191
               ||||||||||||||||||||||
Sbjct: 2606036 gagcgcgaccgcggcgacgagg 2606015

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 223     cctgcccgacgtcgaacagctgcgcc 248
               ||||||||||||||||| ||||||||
Sbjct: 3107077 cctgcccgacgtcgaactgctgcgcc 3107102

>dbj|AB011474.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2A18
          Length = 79899

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 189   aggtacgtccacaggaagatcaccgagcactcctcctgcccgacgtcgaacagctgcgcc 248
             ||||| ||||||| |||||| ||||||||||| || ||  | ||||||||||| || |||
Sbjct: 10654 aggtaggtccacaagaagatgaccgagcactcatcttgagccacgtcgaacagttgtgcc 10595

               
Query: 249   at 250
             ||
Sbjct: 10594 at 10593

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 223     cctgcccgacgtcgaacagctgcgcc 248
               ||||||||||||||||| ||||||||
Sbjct: 3114304 cctgcccgacgtcgaactgctgcgcc 3114329

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 226    gcccgacgtcgaacagctgcg 246
              |||||||||||||||||||||
Sbjct: 725271 gcccgacgtcgaacagctgcg 725251

>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 98      aaaattgaactgtaaagttca 118
               |||||||||||||||||||||
Sbjct: 1298219 aaaattgaactgtaaagttca 1298239

>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 98      aaaattgaactgtaaagttca 118
               |||||||||||||||||||||
Sbjct: 2927913 aaaattgaactgtaaagttca 2927893

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 169     tgagcgcgaccgcggcgacg 188
               ||||||||||||||||||||
Sbjct: 2338031 tgagcgcgaccgcggcgacg 2338050

>ref|XM_964099.1| PREDICTED: Tribolium castaneum similar to Neural-cadherin precursor
            (Cadherin-N protein) (DN-cadherin) (LOC657652), mRNA
          Length = 9141

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 260  gttcatggcgggcggcagcg 279
            ||||||||||||||||||||
Sbjct: 8262 gttcatggcgggcggcagcg 8243

>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    gtgagcgcgaccgcggcgac 187
              ||||||||||||||||||||
Sbjct: 684888 gtgagcgcgaccgcggcgac 684869

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 169     tgagcgcgaccgcggcgacg 188
               ||||||||||||||||||||
Sbjct: 3838891 tgagcgcgaccgcggcgacg 3838872

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 233     gtcgaacagctgcgccatgg 252
               ||||||||||||||||||||
Sbjct: 4223892 gtcgaacagctgcgccatgg 4223873


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,656,788
Number of Sequences: 3902068
Number of extensions: 2656788
Number of successful extensions: 51136
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50656
Number of HSP's gapped (non-prelim): 480
length of query: 325
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 303
effective length of database: 17,147,199,772
effective search space: 5195601530916
effective search space used: 5195601530916
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)