| Clone Name | rbaal40k24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | KAPP_ARATH (P46014) Kinase-associated protein phosphatase (EC 3.... | 71 | 3e-12 | 2 | DMA1_SCHPO (Q10322) Protein dma1 | 31 | 3.0 | 3 | Y4449_ARATH (O23305) FHA domain-containing protein At4g14490 | 31 | 3.9 | 4 | EPOR_PIG (Q9MYZ9) Erythropoietin receptor precursor (EPO-R) | 30 | 5.1 | 5 | URED_SYNPV (O87399) Urease accessory protein ureD | 30 | 8.7 |
|---|
>KAPP_ARATH (P46014) Kinase-associated protein phosphatase (EC 3.1.3.16)| Length = 581 Score = 70.9 bits (172), Expect = 3e-12 Identities = 29/43 (67%), Positives = 36/43 (83%) Frame = -1 Query: 431 RWELVDMGSLNGTFLNSQAVAHPDVGSRRWSEPAELADGDIIT 303 +WELVDMGSLNGT +NS +++HPD+GSR+W P ELA DIIT Sbjct: 240 KWELVDMGSLNGTLVNSHSISHPDLGSRKWGNPVELASDDIIT 282
>DMA1_SCHPO (Q10322) Protein dma1| Length = 267 Score = 31.2 bits (69), Expect = 3.0 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = -1 Query: 428 WELVDMGSLNGTFLNSQAVAHPDVGSRRWSEPAELADGDII 306 W + DMGS +GTFLN ++ P + S+P +++ DI+ Sbjct: 98 WYIQDMGSSSGTFLNHVRLSPPS----KTSKPYPISNNDIL 134
>Y4449_ARATH (O23305) FHA domain-containing protein At4g14490| Length = 386 Score = 30.8 bits (68), Expect = 3.9 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -1 Query: 428 WELVDMGSLNGTFLNSQAVAHPDVGSRRWSEPAELADGDII 306 W + D+GS NGT LNS A+ P+ L DGD+I Sbjct: 60 WVIQDLGSSNGTLLNSNAL-DPETS-------VNLGDGDVI 92
>EPOR_PIG (Q9MYZ9) Erythropoietin receptor precursor (EPO-R)| Length = 509 Score = 30.4 bits (67), Expect = 5.1 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +3 Query: 81 EYVYTRVQFD-LCIDKCTGDSYQAEGYSSNALYTNIYIYIRLTIVDPSPVNDVSC 242 +Y+Y V + D +G S + +G SS+ Y+N Y + +PSP N V+C Sbjct: 454 KYLYLVVSDSGISTDYSSGGSQETQGGSSSGPYSNPYENSLVPAPEPSPPNYVTC 508
>URED_SYNPV (O87399) Urease accessory protein ureD| Length = 319 Score = 29.6 bits (65), Expect = 8.7 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = -1 Query: 431 RWELVDMGSLNGTFLNSQ--AVAHPDVGSRRWSEPAELADGDIIT 303 RWELVD L G LN Q P GS W+ P L +G+ +T Sbjct: 188 RWELVDRLDLGGDALNDQHGLNKRPVFGSLVWAAPMPL-NGEALT 231 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,136,997 Number of Sequences: 219361 Number of extensions: 1650827 Number of successful extensions: 2942 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2880 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2942 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)