ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal40k06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197931.1| Oryza sativa (japonica cultivar-group) unknown ... 264 3e-67
2gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 gen... 264 3e-67
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 264 3e-67
4dbj|AK104136.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 3e-67
5dbj|AK072734.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 3e-67
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 264 3e-67
7gb|AY107177.1| Zea mays PCO111128 mRNA sequence 46 0.13
8ref|XM_476693.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.52
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
10dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
11dbj|AK065419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.52
12dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
13ref|XM_550510.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.1
14dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
15emb|AJ315902.1|OSA315902 Oryza sativa DNA, clone F10 (C5) 42 2.1
16dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
17dbj|AK069560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
18gb|AF192975.1|AF192975 Oryza sativa unknown gene 42 2.1
19dbj|AK062240.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
20gb|AC148120.4| Saimiri boliviensis boliviensis clone CH254-165N1... 42 2.1
21gb|AY596575.1| Saccharum officinarum clone SCCCLR1067F01, comple... 40 8.2
22gb|AC147175.2| Xenopus tropicalis clone CH216-54E8, complete seq... 40 8.2
23gb|AC110241.17| Mus musculus chromosome 16, clone RP23-129F22, c... 40 8.2
24emb|AL591624.6| Human DNA sequence from clone RP11-143A22 on chr... 40 8.2
25emb|AL445250.4| Human DNA sequence from clone RP11-199A24 on chr... 40 8.2
26emb|AL691518.9| Mouse DNA sequence from clone RP23-267K1 on chro... 40 8.2
27emb|BX649539.6| Mouse DNA sequence from clone RP24-371A24 on chr... 40 8.2
28gb|AC100845.2| Homo sapiens chromosome 18, clone RP11-680N20, co... 40 8.2
29gb|AC090371.4| Homo sapiens chromosome 18, clone RP11-746B8, com... 40 8.2
30gb|AC092806.2| Homo sapiens chromosome 1 clone RP11-156F12, comp... 40 8.2
31gb|AC025839.12| Homo sapiens chromosome 8, clone RP11-370K2, com... 40 8.2
32gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, com... 40 8.2
33gb|AC130304.12| Homo sapiens chromosome 8, clone RP11-205M5, com... 40 8.2
34gb|AC078882.8| Homo sapiens BAC clone RP11-194C2 from 2, complet... 40 8.2
35gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24 40 8.2
36emb|AJ328320.1|HSA328320 Homo sapiens genomic sequence surroundi... 40 8.2
37emb|CT572996.14| Mouse DNA sequence from clone RP23-13C8 on chro... 40 8.2
38gb|AC154560.3| Mus musculus BAC clone RP23-400E20 from chromosom... 40 8.2
39gb|AC113180.5| Mus musculus chromosome 16, clone RP23-366B13, co... 40 8.2
40dbj|AP000501.1| Homo sapiens genomic DNA, chromosome 8p11.2, clo... 40 8.2 
>ref|NM_197931.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0056G17.7), mRNA
          Length = 1251

 Score =  264 bits (133), Expect = 3e-67
 Identities = 247/285 (86%)
 Strand = Plus / Minus

                                                                       
Query: 312 tgccctcttcaacctgatacgctcagctcttgaaccaattgtctgacccaatatcgaggc 371
           |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 980 tgccctcttcaatctgatacgctcagctctcgaaccaattgtctgacccaatattgaggc 921

                                                                       
Query: 372 agctattgtaagggccatggcgctcttcggcattaggatggacttcctcagcatccctat 431
           |||||| ||||| ||||||||  |||| ||||| || |  |||||||| ||||| |||||
Sbjct: 920 agctatggtaagcgccatggctgtctttggcatcagcacagacttcctgagcatgcctat 861

                                                                       
Query: 432 gaaaggcactgcagcatggaccgccgcaaaccactgcactgaaaactttgtggtgtgctc 491
           |||||| || || |||||||| || ||||||||||||||||| || ||    ||||||||
Sbjct: 860 gaaaggtaccgccgcatggactgcggcaaaccactgcactgagaatttctccgtgtgctc 801

                                                                       
Query: 492 cctccagatgccaagaggaacatttgctgccataccgagcagcgcgatcaccactacttt 551
           ||||||||||||||| ||||| |||||||||||||| |||| ||| ||||||| || |||
Sbjct: 800 cctccagatgccaaggggaacgtttgctgccataccaagcaacgccatcaccagtatttt 741

                                                        
Query: 552 tgttggtaggggctgagggcgaagccccttcgcaaatgccgtgcg 596
            || |||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 740 cgtcggtaggggctgaggacgaagccccttggcaaaggctgtgcg 696
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>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete
              sequence
          Length = 139999

 Score =  264 bits (133), Expect = 3e-67
 Identities = 247/285 (86%)
 Strand = Plus / Plus

                                                                          
Query: 312    tgccctcttcaacctgatacgctcagctcttgaaccaattgtctgacccaatatcgaggc 371
              |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 127069 tgccctcttcaatctgatacgctcagctctcgaaccaattgtctgacccaatattgaggc 127128

                                                                          
Query: 372    agctattgtaagggccatggcgctcttcggcattaggatggacttcctcagcatccctat 431
              |||||| ||||| ||||||||  |||| ||||| || |  |||||||| ||||| |||||
Sbjct: 127129 agctatggtaagcgccatggctgtctttggcatcagcacagacttcctgagcatgcctat 127188

                                                                          
Query: 432    gaaaggcactgcagcatggaccgccgcaaaccactgcactgaaaactttgtggtgtgctc 491
              |||||| || || |||||||| || ||||||||||||||||| || ||    ||||||||
Sbjct: 127189 gaaaggtaccgccgcatggactgcggcaaaccactgcactgagaatttctccgtgtgctc 127248

                                                                          
Query: 492    cctccagatgccaagaggaacatttgctgccataccgagcagcgcgatcaccactacttt 551
              ||||||||||||||| ||||| |||||||||||||| |||| ||| ||||||| || |||
Sbjct: 127249 cctccagatgccaaggggaacgtttgctgccataccaagcaacgccatcaccagtatttt 127308

                                                           
Query: 552    tgttggtaggggctgagggcgaagccccttcgcaaatgccgtgcg 596
               || |||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 127309 cgtcggtaggggctgaggacgaagccccttggcaaaggctgtgcg 127353
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  264 bits (133), Expect = 3e-67
 Identities = 247/285 (86%)
 Strand = Plus / Plus

                                                                            
Query: 312      tgccctcttcaacctgatacgctcagctcttgaaccaattgtctgacccaatatcgaggc 371
                |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 22672400 tgccctcttcaatctgatacgctcagctctcgaaccaattgtctgacccaatattgaggc 22672459

                                                                            
Query: 372      agctattgtaagggccatggcgctcttcggcattaggatggacttcctcagcatccctat 431
                |||||| ||||| ||||||||  |||| ||||| || |  |||||||| ||||| |||||
Sbjct: 22672460 agctatggtaagcgccatggctgtctttggcatcagcacagacttcctgagcatgcctat 22672519

                                                                            
Query: 432      gaaaggcactgcagcatggaccgccgcaaaccactgcactgaaaactttgtggtgtgctc 491
                |||||| || || |||||||| || ||||||||||||||||| || ||    ||||||||
Sbjct: 22672520 gaaaggtaccgccgcatggactgcggcaaaccactgcactgagaatttctccgtgtgctc 22672579

                                                                            
Query: 492      cctccagatgccaagaggaacatttgctgccataccgagcagcgcgatcaccactacttt 551
                ||||||||||||||| ||||| |||||||||||||| |||| ||| ||||||| || |||
Sbjct: 22672580 cctccagatgccaaggggaacgtttgctgccataccaagcaacgccatcaccagtatttt 22672639

                                                             
Query: 552      tgttggtaggggctgagggcgaagccccttcgcaaatgccgtgcg 596
                 || |||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 22672640 cgtcggtaggggctgaggacgaagccccttggcaaaggctgtgcg 22672684
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>dbj|AK104136.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F07, full
            insert sequence
          Length = 1281

 Score =  264 bits (133), Expect = 3e-67
 Identities = 247/285 (86%)
 Strand = Plus / Minus

                                                                        
Query: 312  tgccctcttcaacctgatacgctcagctcttgaaccaattgtctgacccaatatcgaggc 371
            |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 1025 tgccctcttcaatctgatacgctcagctctcgaaccaattgtctgacccaatattgaggc 966

                                                                        
Query: 372  agctattgtaagggccatggcgctcttcggcattaggatggacttcctcagcatccctat 431
            |||||| ||||| ||||||||  |||| ||||| || |  |||||||| ||||| |||||
Sbjct: 965  agctatggtaagcgccatggctgtctttggcatcagcacagacttcctgagcatgcctat 906

                                                                        
Query: 432  gaaaggcactgcagcatggaccgccgcaaaccactgcactgaaaactttgtggtgtgctc 491
            |||||| || || |||||||| || ||||||||||||||||| || ||    ||||||||
Sbjct: 905  gaaaggtaccgccgcatggactgcggcaaaccactgcactgagaatttctccgtgtgctc 846

                                                                        
Query: 492  cctccagatgccaagaggaacatttgctgccataccgagcagcgcgatcaccactacttt 551
            ||||||||||||||| ||||| |||||||||||||| |||| ||| ||||||| || |||
Sbjct: 845  cctccagatgccaaggggaacgtttgctgccataccaagcaacgccatcaccagtatttt 786

                                                         
Query: 552  tgttggtaggggctgagggcgaagccccttcgcaaatgccgtgcg 596
             || |||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 785  cgtcggtaggggctgaggacgaagccccttggcaaaggctgtgcg 741
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>dbj|AK072734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141G14, full
            insert sequence
          Length = 1357

 Score =  264 bits (133), Expect = 3e-67
 Identities = 247/285 (86%)
 Strand = Plus / Minus

                                                                        
Query: 312  tgccctcttcaacctgatacgctcagctcttgaaccaattgtctgacccaatatcgaggc 371
            |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 1047 tgccctcttcaatctgatacgctcagctctcgaaccaattgtctgacccaatattgaggc 988

                                                                        
Query: 372  agctattgtaagggccatggcgctcttcggcattaggatggacttcctcagcatccctat 431
            |||||| ||||| ||||||||  |||| ||||| || |  |||||||| ||||| |||||
Sbjct: 987  agctatggtaagcgccatggctgtctttggcatcagcacagacttcctgagcatgcctat 928

                                                                        
Query: 432  gaaaggcactgcagcatggaccgccgcaaaccactgcactgaaaactttgtggtgtgctc 491
            |||||| || || |||||||| || ||||||||||||||||| || ||    ||||||||
Sbjct: 927  gaaaggtaccgccgcatggactgcggcaaaccactgcactgagaatttctccgtgtgctc 868

                                                                        
Query: 492  cctccagatgccaagaggaacatttgctgccataccgagcagcgcgatcaccactacttt 551
            ||||||||||||||| ||||| |||||||||||||| |||| ||| ||||||| || |||
Sbjct: 867  cctccagatgccaaggggaacgtttgctgccataccaagcaacgccatcaccagtatttt 808

                                                         
Query: 552  tgttggtaggggctgagggcgaagccccttcgcaaatgccgtgcg 596
             || |||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 807  cgtcggtaggggctgaggacgaagccccttggcaaaggctgtgcg 763
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  264 bits (133), Expect = 3e-67
 Identities = 247/285 (86%)
 Strand = Plus / Plus

                                                                            
Query: 312      tgccctcttcaacctgatacgctcagctcttgaaccaattgtctgacccaatatcgaggc 371
                |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 22684868 tgccctcttcaatctgatacgctcagctctcgaaccaattgtctgacccaatattgaggc 22684927

                                                                            
Query: 372      agctattgtaagggccatggcgctcttcggcattaggatggacttcctcagcatccctat 431
                |||||| ||||| ||||||||  |||| ||||| || |  |||||||| ||||| |||||
Sbjct: 22684928 agctatggtaagcgccatggctgtctttggcatcagcacagacttcctgagcatgcctat 22684987

                                                                            
Query: 432      gaaaggcactgcagcatggaccgccgcaaaccactgcactgaaaactttgtggtgtgctc 491
                |||||| || || |||||||| || ||||||||||||||||| || ||    ||||||||
Sbjct: 22684988 gaaaggtaccgccgcatggactgcggcaaaccactgcactgagaatttctccgtgtgctc 22685047

                                                                            
Query: 492      cctccagatgccaagaggaacatttgctgccataccgagcagcgcgatcaccactacttt 551
                ||||||||||||||| ||||| |||||||||||||| |||| ||| ||||||| || |||
Sbjct: 22685048 cctccagatgccaaggggaacgtttgctgccataccaagcaacgccatcaccagtatttt 22685107

                                                             
Query: 552      tgttggtaggggctgagggcgaagccccttcgcaaatgccgtgcg 596
                 || |||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 22685108 cgtcggtaggggctgaggacgaagccccttggcaaaggctgtgcg 22685152
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>gb|AY107177.1| Zea mays PCO111128 mRNA sequence
          Length = 539

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 313 gccctcttcaacctgatacgctcagctcttgaaccaattgtct 355
           ||||||||||  |||||||| ||||||||||| || |||||||
Sbjct: 59  gccctcttcagtctgatacgttcagctcttgacccgattgtct 17
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>ref|XM_476693.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1700

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 415  ttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactgc 468
            ||||||||||| || ||||| || || || |||||||| || ||||||||||||
Sbjct: 1175 ttcctcagcattccgatgaatggaacagcggcatggacagctgcaaaccactgc 1122
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                     
Query: 415     ttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactgc 468
               ||||||||||| || ||||| || || || |||||||| || ||||||||||||
Sbjct: 3216019 ttcctcagcattccgatgaatggaacagcggcatggacagctgcaaaccactgc 3216072
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>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0455F03
          Length = 158201

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                    
Query: 415    ttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactgc 468
              ||||||||||| || ||||| || || || |||||||| || ||||||||||||
Sbjct: 131009 ttcctcagcattccgatgaatggaacagcggcatggacagctgcaaaccactgc 131062
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>dbj|AK065419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021B09, full
            insert sequence
          Length = 1699

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 415  ttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactgc 468
            ||||||||||| || ||||| || || || |||||||| || ||||||||||||
Sbjct: 1174 ttcctcagcattccgatgaatggaacagcggcatggacagctgcaaaccactgc 1121
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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1714_H10
          Length = 191580

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 415   ttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactgc 468
             ||||||||||| || ||||| || || || |||||||| || ||||||||||||
Sbjct: 25712 ttcctcagcattccgatgaatggaacagcggcatggacagctgcaaaccactgc 25765
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>ref|XM_550510.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1116

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 415 ttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactg 467
           ||||||||||| || ||||| || || || |||||||| || |||||||||||
Sbjct: 845 ttcctcagcattccaatgaatggaacagcggcatggacagctgcaaaccactg 793
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 415    ttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactg 467
              ||||||||||| || ||||| || || || |||||||| || |||||||||||
Sbjct: 876484 ttcctcagcattccaatgaatggaacagcggcatggacagctgcaaaccactg 876536
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>emb|AJ315902.1|OSA315902 Oryza sativa DNA, clone F10 (C5)
          Length = 11618

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 415  ttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactg 467
            ||||||||||| || ||||| || || || |||||||| || |||||||||||
Sbjct: 8572 ttcctcagcattccaatgaatggaacagcggcatggacagctgcaaaccactg 8624
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>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0019F11
          Length = 123673

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 415   ttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactg 467
             ||||||||||| || ||||| || || || |||||||| || |||||||||||
Sbjct: 57379 ttcctcagcattccaatgaatggaacagcggcatggacagctgcaaaccactg 57431
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>dbj|AK069560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020P18, full
            insert sequence
          Length = 3418

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 415  ttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactg 467
            ||||||||||| || ||||| || || || |||||||| || |||||||||||
Sbjct: 2959 ttcctcagcattccaatgaatggaacagcggcatggacagctgcaaaccactg 2907
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>gb|AF192975.1|AF192975 Oryza sativa unknown gene
          Length = 673

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 415 ttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactg 467
           ||||||||||| || ||||| || || || |||||||| || |||||||||||
Sbjct: 127 ttcctcagcattccaatgaatggaacagcggcatggacagctgcaaaccactg 75
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>dbj|AK062240.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E07, full
           insert sequence
          Length = 1116

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 415 ttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactg 467
           ||||||||||| || ||||| || || || |||||||| || |||||||||||
Sbjct: 581 ttcctcagcattccaatgaatggaacagcggcatggacagctgcaaaccactg 529
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>gb|AC148120.4| Saimiri boliviensis boliviensis clone CH254-165N18, complete sequence
          Length = 199625

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 459    aaaccactgcactgaaaactt 479
              |||||||||||||||||||||
Sbjct: 131940 aaaccactgcactgaaaactt 131920
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>gb|AY596575.1| Saccharum officinarum clone SCCCLR1067F01, complete sequence
          Length = 1457

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 412 gacttcctcagcatccctatgaaaggcactgcagcatggaccgccgcaaaccactg 467
           ||||||||||||||  | ||||| || || || |||||||| || |||||||||||
Sbjct: 917 gacttcctcagcattgcaatgaacggaacagcggcatggacagctgcaaaccactg 862
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>gb|AC147175.2| Xenopus tropicalis clone CH216-54E8, complete sequence
          Length = 187921

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    aatgaatacaaagaaacaat 89
             ||||||||||||||||||||
Sbjct: 94748 aatgaatacaaagaaacaat 94767
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>gb|AC110241.17| Mus musculus chromosome 16, clone RP23-129F22, complete sequence
          Length = 256720

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 500    tgccaagaggaacatttgctgcca 523
              ||||||||||||||||| ||||||
Sbjct: 246992 tgccaagaggaacatttcctgcca 246969
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>emb|AL591624.6| Human DNA sequence from clone RP11-143A22 on chromosome 6 Contains a
              novel gene and a CpG island, complete sequence
          Length = 146887

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    aataagcatgatcatctcat 144
              ||||||||||||||||||||
Sbjct: 145775 aataagcatgatcatctcat 145794
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>emb|AL445250.4| Human DNA sequence from clone RP11-199A24 on chromosome 6 Contains a
             CpG island, complete sequence
          Length = 178384

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   aataagcatgatcatctcat 144
             ||||||||||||||||||||
Sbjct: 69128 aataagcatgatcatctcat 69109
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>emb|AL691518.9| Mouse DNA sequence from clone RP23-267K1 on chromosome 11 Contains a
             CpG island, complete sequence
          Length = 114102

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    aatacaaagaaacaatttct 93
             ||||||||||||||||||||
Sbjct: 12853 aatacaaagaaacaatttct 12834
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>emb|BX649539.6| Mouse DNA sequence from clone RP24-371A24 on chromosome 4 Contains a
             ribosomal protein S2 (Rps2) pseudogene, complete sequence
          Length = 198964

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aatacaaagaaacaatttct 93
             ||||||||||||||||||||
Sbjct: 90822 aatacaaagaaacaatttct 90841
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>gb|AC100845.2| Homo sapiens chromosome 18, clone RP11-680N20, complete sequence
          Length = 174328

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 65     ataacaatgaatacaaagaaacaa 88
              ||||||||||||||||| ||||||
Sbjct: 153927 ataacaatgaatacaaacaaacaa 153904
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>gb|AC090371.4| Homo sapiens chromosome 18, clone RP11-746B8, complete sequence
          Length = 173028

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 65     ataacaatgaatacaaagaaacaa 88
              ||||||||||||||||| ||||||
Sbjct: 148864 ataacaatgaatacaaacaaacaa 148887
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>gb|AC092806.2| Homo sapiens chromosome 1 clone RP11-156F12, complete sequence
          Length = 153527

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 60    acacaataacaatgaatacaaagaaaca 87
             |||||||||||| |||||||| ||||||
Sbjct: 75548 acacaataacaaggaatacaaggaaaca 75521
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>gb|AC025839.12| Homo sapiens chromosome 8, clone RP11-370K2, complete sequence
          Length = 178009

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 485   tgtgctccctccagatgcca 504
             ||||||||||||||||||||
Sbjct: 28936 tgtgctccctccagatgcca 28917
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>gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, complete sequence
          Length = 190274

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   cggaaccagggctggggaca 184
             ||||||||||||||||||||
Sbjct: 48537 cggaaccagggctggggaca 48556
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>gb|AC130304.12| Homo sapiens chromosome 8, clone RP11-205M5, complete sequence
          Length = 161953

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    cggaaccagggctggggaca 184
              ||||||||||||||||||||
Sbjct: 144767 cggaaccagggctggggaca 144786
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>gb|AC078882.8| Homo sapiens BAC clone RP11-194C2 from 2, complete sequence
          Length = 87351

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 494   tccagatgccaagaggaacatttg 517
             |||||||||||| |||||||||||
Sbjct: 71427 tccagatgccaataggaacatttg 71450
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>gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24
          Length = 101458

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    ataacaatgaatacaaagaaacaa 88
             ||||||||||| ||||||||||||
Sbjct: 36899 ataacaatgaaaacaaagaaacaa 36922
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>emb|AJ328320.1|HSA328320 Homo sapiens genomic sequence surrounding NotI site, clone
           NL4-CB17R
          Length = 672

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 222 ctggacaggacctgagctcccagt 245
           ||||||||| ||||||||||||||
Sbjct: 300 ctggacagggcctgagctcccagt 323
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>emb|CT572996.14| Mouse DNA sequence from clone RP23-13C8 on chromosome 17, complete
             sequence
          Length = 51247

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   ccctctgctgctaattttgc 314
             ||||||||||||||||||||
Sbjct: 49288 ccctctgctgctaattttgc 49269
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>gb|AC154560.3| Mus musculus BAC clone RP23-400E20 from chromosome 17, complete
           sequence
          Length = 197657

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 ccctctgctgctaattttgc 314
           ||||||||||||||||||||
Sbjct: 41  ccctctgctgctaattttgc 22
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>gb|AC113180.5| Mus musculus chromosome 16, clone RP23-366B13, complete sequence
          Length = 215198

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 500    tgccaagaggaacatttgctgcca 523
              ||||||||||||||||| ||||||
Sbjct: 149029 tgccaagaggaacatttcctgcca 149006
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>dbj|AP000501.1| Homo sapiens genomic DNA, chromosome 8p11.2, clone:91h23 to 9-41
          Length = 178348

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    cggaaccagggctggggaca 184
              ||||||||||||||||||||
Sbjct: 175230 cggaaccagggctggggaca 175249


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,110,487
Number of Sequences: 3902068
Number of extensions: 5110487
Number of successful extensions: 96821
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96655
Number of HSP's gapped (non-prelim): 160
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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