ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal40j22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF161718.1|AF161718 Triticum aestivum Sec61p (sec61) mRNA, complete cds Length = 1630 Score = 700 bits (353), Expect = 0.0 Identities = 479/520 (92%), Gaps = 10/520 (1%) Strand = Plus / Minus Query: 110 ctacagatttctcaactgtaaataagtcgggc-aacctaaacagaatttaatctccggtt 168 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1588 ctacagatttctcaactgtaaataagtcggggtaacctaaacagaatttaatctccggtt 1529 Query: 169 acaaccaaaaca----gccagccaagcagtactgtgacagtctagaaagact-----tga 219 ||||||| |||| ||||||||||||||| || ||| ||||| ||||||| || Sbjct: 1528 acaaccacaacagccagccagccaagcagtattgcgactgtctaaaaagactcgagctgg 1469 Query: 220 gctgtagccataacatgctcccaaagctatcatgtatcaatcagaacccaaagaaaccaa 279 ||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||| Sbjct: 1468 gctgtagccataacatgctcccaaagctatcatgtttcaatcaaaacccgaaaaaaccaa 1409 Query: 280 gctcggtcgccctctccttctcgaaggtctcaaagtactggtatatgatggtaacagnca 339 |||| || ||||||||||||||||||||||||||||||||||||||||||| | ||| || Sbjct: 1408 gctctgttgccctctccttctcgaaggtctcaaagtactggtatatgatggaatcagcca 1349 Query: 340 acagaataccggttcctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcac 399 ||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 1348 acaaaattccggttcctgaaccaattgcgcccatgaaatcagcaagaacagtcaatgcgc 1289 Query: 400 cgatgcatactccaccaaatgcagcagcagtagggatgtatctgttcagttccttctgca 459 ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| |||| Sbjct: 1288 cgatgcacactccaccaaatgcagcggcagtagggatgtatttgttcagttccttttgca 1229 Query: 460 agtttgactcgcgatggcctggcataaccatttgttgntccttcagctgcttagcgacat 519 ||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 1228 ggtttgactcacgatgacctggcatcaccatttgttgttccttcagctgcttagcaacat 1169 Query: 520 ccttggctgatgaaccagagacttcaatccatgtttttgagaagagagcacatgctgaca 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1168 ccttggctgatgaaccagagacttcaatccatgtttttgagaagagagcacatgctgaca 1109 Query: 580 gcatgaagaccacatagaacaatgcatggaacggattcgc 619 ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1108 gcatgaagaccacatagaacaatgcatggaatggattcgc 1069
>dbj|AK100597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107A15, full insert sequence Length = 2132 Score = 450 bits (227), Expect = e-123 Identities = 321/353 (90%) Strand = Plus / Minus Query: 267 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 326 |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 1573 ccaaagaaaccaagctcggttgccctctctttctcgaatgtctcgaagtactggtaaatg 1514 Query: 327 atggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 386 |||||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 1513 atggtaacagcaagcagaataccagttcctgaaccaatcgcacccatgaaatcagctaga 1454 Query: 387 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 446 |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 1453 acagtcaatgcaccaatgcacactccaccaaatgcagcagcagtggggatgtatctgttc 1394 Query: 447 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgntccttcagc 506 | ||||||||||||||||||||| |||||||| ||||| ||||||||||| ||||||| | Sbjct: 1393 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgttgttccttcaac 1334 Query: 507 tgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgagaagaga 566 || ||||| |||||||| || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 1333 tgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttgagaagaga 1274 Query: 567 gcacatgctgacagcatgaagaccacatagaacaatgcatggaacggattcgc 619 ||||| |||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 1273 gcacaagctgacagcatgaataccacatagaacagcgcatggaacggattcgc 1221 Score = 50.1 bits (25), Expect = 0.009 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Minus Query: 129 aaataagtcgggcaacctaaacagaatttaa--tctccggttacaacca-aaacagccag 185 |||||||||||||||||||||| || ||||| ||||| ||||| ||| |||||||| | Sbjct: 1706 aaataagtcgggcaacctaaactgactttaagctctccaattacatccataaacagccgg 1647 Query: 186 ccaagcagtact 197 ||||| |||||| Sbjct: 1646 ccaagaagtact 1635
>gb|BT017902.1| Zea mays clone EL01N0516D06.c mRNA sequence Length = 1209 Score = 438 bits (221), Expect = e-119 Identities = 324/359 (90%) Strand = Plus / Minus Query: 258 aatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac 317 ||||| || ||||||||||||||||| || ||||| |||||||||||||| || ||||| Sbjct: 759 aatcaaaaaccaaagaaaccaagctccgttgccctttccttctcgaaggtttcgaagtat 700 Query: 318 tggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaa 377 ||||||||||| || |||| || ||| || || ||||||||||||||||| ||||||||| Sbjct: 699 tggtatatgattgtcacagccagcagtattccagttcctgaaccaattgcacccatgaaa 640 Query: 378 tcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatg 437 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 639 tcagccaggacagtcaatgcgccgatgcatactccaccaaatgcagcagcagtggggatg 580 Query: 438 tatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgn 497 |||| ||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 579 tatcggttcagttccttctgcaagtttgactcacgatgtcctggcatcaccatttgttgt 520 Query: 498 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 557 ||||| ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 519 tccttgagctgcttagcaacatcctttgctgatgaaccagaaacttcaatccacgttttt 460 Query: 558 gagaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||| ||||| || ||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 459 gagaacagagcgcaagctgacagcatgaagaccacataaaacagtgcatggaatggatt 401
>dbj|AK062048.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A12, full insert sequence Length = 1375 Score = 436 bits (220), Expect = e-119 Identities = 317/350 (90%) Strand = Plus / Minus Query: 267 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 326 ||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 1048 ccaaagaaaccaagctcagttgccctctctttctcgaatgtctcgaagtactggtagatg 989 Query: 327 atggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 386 || ||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 988 atagtaacagcaagcagaataccagttcctgaaccaatagcacccatgaaatcagctaga 929 Query: 387 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 446 |||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||| Sbjct: 928 acagtcaatgcaccaatgcacactccaccaaatgcagcggcagtggggatgtatctgttc 869 Query: 447 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgntccttcagc 506 | ||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||||| Sbjct: 868 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgctgttccttcagc 809 Query: 507 tgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgagaagaga 566 || ||||| |||||||| || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 808 tgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttgagaagaga 749 Query: 567 gcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 748 gcacaagctgacagcatgaagaccacatagaacaacgcatggaacggatt 699
>dbj|AK062070.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E03, full insert sequence Length = 1621 Score = 412 bits (208), Expect = e-112 Identities = 320/358 (89%) Strand = Plus / Minus Query: 259 atcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtact 318 |||| |||||||||||||| |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 1336 atcaaaacccaaagaaacctagctcggtagccctttctttctcgaatgtctcaaaatact 1277 Query: 319 ggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaat 378 |||| ||||| ||||||| | ||| || || ||||||||||||||||| |||||||||| Sbjct: 1276 ggtagatgattgtaacagcgagcagtatcccagttcctgaaccaattgcacccatgaaat 1217 Query: 379 cagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgt 438 |||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 1216 cagctaggacagtcaatgcaccaatgcagactccaccaaatgcagcagctgtagggatgt 1157 Query: 439 atctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgnt 498 ||||||||| ||| ||||| || || ||||| |||||||||||||| ||||||||||| | Sbjct: 1156 atctgttcaattctttctgtaaattcgactcacgatggcctggcatcaccatttgttgct 1097 Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 1096 ccttgagctgtttagcaacatcctttgctgatgaaccagatacttcaatccatgtctttg 1037 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1036 agaagagagcacaagctgacagcatgaagaccacatagaacagtgcatggaatggatt 979
>gb|AY110211.1| Zea mays CL336_2 mRNA sequence Length = 1189 Score = 408 bits (206), Expect = e-111 Identities = 312/348 (89%) Strand = Plus / Minus Query: 262 agaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggt 321 |||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 897 agaaaccaaagaaaccaagctcggttgccctttccttctcgaatgtctcaaagtactggt 838 Query: 322 atatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcag 381 ||||||| || |||| | |||||| || |||||||| |||||||||||||||||||||| Sbjct: 837 atatgatagtgacagcgagcagaatgccagttcctgagccaattgcgcccatgaaatcag 778 Query: 382 ccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatc 441 | || ||||| | || || ||||| ||||| |||||||| |||||||| |||||||||| Sbjct: 777 ctaggacagttagcgcgccaatgcacactcctccaaatgctgcagcagttgggatgtatc 718 Query: 442 tgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgntcct 501 ||||||||||| | |||| ||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 717 tgttcagttccctttgcaggtttgactcacgatggcctggcatcaccatttgttgctcct 658 Query: 502 tcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgaga 561 ||||||||||||| || ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 657 tcagctgcttagcaacgtccttcgctgatgaaccagaaacttcaatccatgtctttgaga 598 Query: 562 agagagcacatgctgacagcatgaagaccacatagaacaatgcatgga 609 |||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 597 agagagcacaggctgacagcataaagaccacatagaacaatgcatgga 550
>dbj|AK073633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048G12, full insert sequence Length = 1970 Score = 404 bits (204), Expect = e-109 Identities = 319/358 (89%) Strand = Plus / Minus Query: 259 atcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtact 318 |||| |||||| ||||||| |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 1576 atcaaaacccagagaaacctagctcggtagccctttctttctcgaatgtctcaaaatact 1517 Query: 319 ggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaat 378 |||| ||||| ||||||| | ||| || || ||||||||||||||||| |||||||||| Sbjct: 1516 ggtagatgattgtaacagcgagcagtatcccagttcctgaaccaattgcacccatgaaat 1457 Query: 379 cagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgt 438 |||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 1456 cagctaggacagtcaatgcaccaatgcagactccaccaaatgcagcagctgtagggatgt 1397 Query: 439 atctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgnt 498 ||||||||| ||| ||||| || || ||||| |||||||||||||| ||||||||||| | Sbjct: 1396 atctgttcaattctttctgtaaattcgactcacgatggcctggcatcaccatttgttgct 1337 Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 1336 ccttgagctgtttagcaacatcctttgctgatgaaccagatacttcaatccatgtctttg 1277 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1276 agaagagagcacaagctgacagcatgaagaccacatagaacagtgcatggaatggatt 1219
>gb|BT016615.1| Zea mays clone Contig448 mRNA sequence Length = 1755 Score = 391 bits (197), Expect = e-105 Identities = 318/359 (88%) Strand = Plus / Minus Query: 258 aatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac 317 ||||| || ||||||||||||||||| |||||||| |||||||| ||||| || ||||| Sbjct: 1531 aatcaaaaaccaaagaaaccaagctcagtcgccctttccttctcaaaggtttcgaagtat 1472 Query: 318 tggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaa 377 ||||||||||| || |||| | || ||||| |||||||||||||| || ||||||||| Sbjct: 1471 tggtatatgattgtcacagcgagcaatataccagttcctgaaccaatcgcacccatgaaa 1412 Query: 378 tcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatg 437 |||||||| || |||||||| || |||||||| |||||||||||||||||||| |||||| Sbjct: 1411 tcagccaggacggtcaatgcgccaatgcatacaccaccaaatgcagcagcagtggggatg 1352 Query: 438 tatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgn 497 |||| ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 1351 tatcggttaagttccttctgcaagttcgactcacgatggcctggcatcaccatttgttgt 1292 Query: 498 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 557 ||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||| ||| Sbjct: 1291 tccttgagctgcttagcaacatcctttgctgatgaacccgaaacttcaatccatgtcttt 1232 Query: 558 gagaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||| |||||||| ||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 1231 gagaacagagcacaggctgacagcatgaagaccacataaaacagtgcatggaatggatt 1173
>gb|BT024137.1| Zea mays clone EL01N0446B05 mRNA sequence Length = 1756 Score = 391 bits (197), Expect = e-105 Identities = 318/359 (88%) Strand = Plus / Minus Query: 258 aatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac 317 ||||| || ||||||||||||||||| |||||||| |||||||| ||||| || ||||| Sbjct: 1508 aatcaaaaaccaaagaaaccaagctcagtcgccctttccttctcaaaggtttcgaagtat 1449 Query: 318 tggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaa 377 ||||||||||| || |||| | || ||||| |||||||||||||| || ||||||||| Sbjct: 1448 tggtatatgattgtcacagcgagcaatataccagttcctgaaccaatcgcacccatgaaa 1389 Query: 378 tcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatg 437 |||||||| || |||||||| || |||||||| |||||||||||||||||||| |||||| Sbjct: 1388 tcagccaggacggtcaatgcgccaatgcatacaccaccaaatgcagcagcagtggggatg 1329 Query: 438 tatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgn 497 |||| ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 1328 tatcggttaagttccttctgcaagttcgactcacgatggcctggcatcaccatttgttgt 1269 Query: 498 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 557 ||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||| ||| Sbjct: 1268 tccttgagctgcttagcaacatcctttgctgatgaaccggaaacttcaatccatgtcttt 1209 Query: 558 gagaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||| |||||||| ||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 1208 gagaacagagcacaggctgacagcatgaagaccacataaaacagtgcatggaatggatt 1150
>gb|AY106354.1| Zea mays PCO109407 mRNA sequence Length = 1769 Score = 391 bits (197), Expect = e-105 Identities = 318/359 (88%) Strand = Plus / Minus Query: 258 aatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac 317 ||||| || ||||||||||||||||| |||||||| |||||||| ||||| || ||||| Sbjct: 1530 aatcaaaaaccaaagaaaccaagctcagtcgccctttccttctcaaaggtttcgaagtat 1471 Query: 318 tggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaa 377 ||||||||||| || |||| | || ||||| |||||||||||||| || ||||||||| Sbjct: 1470 tggtatatgattgtcacagcgagcaatataccagttcctgaaccaatcgcacccatgaaa 1411 Query: 378 tcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatg 437 |||||||| || |||||||| || |||||||| |||||||||||||||||||| |||||| Sbjct: 1410 tcagccaggacggtcaatgcgccaatgcatacaccaccaaatgcagcagcagtggggatg 1351 Query: 438 tatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgn 497 |||| ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 1350 tatcggttaagttccttctgcaagttcgactcacgatggcctggcatcaccatttgttgt 1291 Query: 498 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 557 ||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||| ||| Sbjct: 1290 tccttgagctgcttagcaacatcctttgctgatgaaccggaaacttcaatccatgtcttt 1231 Query: 558 gagaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||| |||||||| ||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 1230 gagaacagagcacaggctgacagcatgaagaccacataaaacagtgcatggaatggatt 1172
>gb|AY044237.1| Hordeum vulgare Sec61 alpha subunit mRNA, complete cds Length = 1864 Score = 359 bits (181), Expect = 7e-96 Identities = 305/347 (87%) Strand = Plus / Minus Query: 270 aagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatgatg 329 ||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||| Sbjct: 1539 aagaaaccaagctcggtcgccctttccttctcgaacgtctcgaagtattggtatatgatg 1480 Query: 330 gtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcagccagaaca 389 || || | | ||| ||||||||||||||||| ||||| |||||||||||||| || ||| Sbjct: 1479 gtgaccgcaagcagtataccggttcctgaaccgattgcacccatgaaatcagctaggaca 1420 Query: 390 gtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttcagt 449 |||| || || ||||| ||||| |||| ||||||||| || |||||||||||||||| Sbjct: 1419 gtcagcgcgccaatgcagactcctccaattgcagcagcggtggggatgtatctgttcaac 1360 Query: 450 tccttctgcaagtttgactcgcgatggcctggcataaccatttgttgntccttcagctgc 509 ||| ||| |||||||||||| |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 1359 tccctctccaagtttgactcacgatggcctggcatcaccatttgttgttccttgagctgc 1300 Query: 510 ttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgagaagagagca 569 |||| |||||| | |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1299 ctagcaacatcccttgctgatgaaccagaaacttcaatccatgtctttgagaagagagcg 1240 Query: 570 catgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 || |||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1239 caagctgacagcatgaagaccacatagaacagcgcatggaatggatt 1193
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 311 bits (157), Expect = 1e-81 Identities = 215/235 (91%) Strand = Plus / Plus Query: 267 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 326 |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 10862983 ccaaagaaaccaagctcggttgccctctctttctcgaatgtctcgaagtactggtaaatg 10863042 Query: 327 atggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 386 |||||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 10863043 atggtaacagcaagcagaataccagttcctgaaccaatcgcacccatgaaatcagctaga 10863102 Query: 387 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 446 |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 10863103 acagtcaatgcaccaatgcacactccaccaaatgcagcagcagtggggatgtatctgttc 10863162 Query: 447 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgntcct 501 | ||||||||||||||||||||| |||||||| ||||| ||||||||||| |||| Sbjct: 10863163 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgttgttcct 10863217 Score = 280 bits (141), Expect = 5e-72 Identities = 211/235 (89%) Strand = Plus / Plus Query: 267 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 326 ||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 10853368 ccaaagaaaccaagctcagttgccctctctttctcgaatgtctcgaagtactggtagatg 10853427 Query: 327 atggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 386 || ||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 10853428 atagtaacagcaagcagaataccagttcctgaaccaatagcacccatgaaatcagctaga 10853487 Query: 387 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 446 |||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||| Sbjct: 10853488 acagtcaatgcaccaatgcacactccaccaaatgcagcggcagtggggatgtatctgttc 10853547 Query: 447 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgntcct 501 | ||||||||||||||||||||| |||||||| ||||| |||||||| || |||| Sbjct: 10853548 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgctgttcct 10853602 Score = 204 bits (103), Expect = 2e-49 Identities = 201/233 (86%), Gaps = 7/233 (3%) Strand = Plus / Plus Query: 267 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac---tggtat 323 |||||||||||||||| || |||||||| ||||| ||||| |||||| ||||| Sbjct: 10874491 ccaaagaaaccaagcttagttgccctctc----tcgaatgtctcgaagtacagctggtag 10874546 Query: 324 atgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcagcc 383 ||||||||||||| | |||||| || |||||||||||||| || |||||||||||||| Sbjct: 10874547 atgatggtaacagcaagcagaatgccagttcctgaaccaatcgcacccatgaaatcagct 10874606 Query: 384 agaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctg 443 ||||||||||||||||| ||||| ||||||||||||||||| ||||| | ||||| |||| Sbjct: 10874607 agaacagtcaatgcaccaatgcacactccaccaaatgcagcggcagtggagatgtgtctg 10874666 Query: 444 ttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttg 496 |||| ||||||||||||||||||||| | |||||| ||||| ||||||||||| Sbjct: 10874667 ttcaattccttctgcaagtttgactcacaatggccaggcatcaccatttgttg 10874719 Score = 163 bits (82), Expect = 8e-37 Identities = 109/118 (92%) Strand = Plus / Plus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||||||||| ||||| |||||||| || ||||| ||||| |||||||||||||| |||| Sbjct: 10854032 ccttcagctgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttg 10854091 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10854092 agaagagagcacaagctgacagcatgaagaccacatagaacaacgcatggaacggatt 10854149 Score = 145 bits (73), Expect = 2e-31 Identities = 109/121 (90%) Strand = Plus / Plus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||||| ||| ||||| |||||||| || ||||| ||||| |||||||||||||| |||| Sbjct: 10863652 ccttcaactgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttg 10863711 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggattcg 618 ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 10863712 agaagagagcacaagctgacagcatgaataccacatagaacagcgcatggaacggattcg 10863771 Query: 619 c 619 | Sbjct: 10863772 c 10863772 Score = 50.1 bits (25), Expect = 0.009 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 129 aaataagtcgggcaacctaaacagaatttaa--tctccggttacaacca-aaacagccag 185 |||||||||||||||||||||| || ||||| ||||| ||||| ||| |||||||| | Sbjct: 10862850 aaataagtcgggcaacctaaactgactttaagctctccaattacatccataaacagccgg 10862909 Query: 186 ccaagcagtact 197 ||||| |||||| Sbjct: 10862910 ccaagaagtact 10862921 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgt 553 |||||| ||| ||| | |||||||| || ||||| ||||| |||||||||||||| Sbjct: 10876056 ccttcaactgtttaacaacatcctttgcagatgagccagaaacttcaatccatgt 10876110
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 311 bits (157), Expect = 1e-81 Identities = 215/235 (91%) Strand = Plus / Plus Query: 267 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 326 |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 86706 ccaaagaaaccaagctcggttgccctctctttctcgaatgtctcgaagtactggtaaatg 86765 Query: 327 atggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 386 |||||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 86766 atggtaacagcaagcagaataccagttcctgaaccaatcgcacccatgaaatcagctaga 86825 Query: 387 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 446 |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 86826 acagtcaatgcaccaatgcacactccaccaaatgcagcagcagtggggatgtatctgttc 86885 Query: 447 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgntcct 501 | ||||||||||||||||||||| |||||||| ||||| ||||||||||| |||| Sbjct: 86886 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgttgttcct 86940 Score = 280 bits (141), Expect = 5e-72 Identities = 211/235 (89%) Strand = Plus / Plus Query: 267 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 326 ||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 77091 ccaaagaaaccaagctcagttgccctctctttctcgaatgtctcgaagtactggtagatg 77150 Query: 327 atggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 386 || ||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 77151 atagtaacagcaagcagaataccagttcctgaaccaatagcacccatgaaatcagctaga 77210 Query: 387 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 446 |||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||| Sbjct: 77211 acagtcaatgcaccaatgcacactccaccaaatgcagcggcagtggggatgtatctgttc 77270 Query: 447 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgntcct 501 | ||||||||||||||||||||| |||||||| ||||| |||||||| || |||| Sbjct: 77271 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgctgttcct 77325 Score = 204 bits (103), Expect = 2e-49 Identities = 201/233 (86%), Gaps = 7/233 (3%) Strand = Plus / Plus Query: 267 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac---tggtat 323 |||||||||||||||| || |||||||| ||||| ||||| |||||| ||||| Sbjct: 98214 ccaaagaaaccaagcttagttgccctctc----tcgaatgtctcgaagtacagctggtag 98269 Query: 324 atgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcagcc 383 ||||||||||||| | |||||| || |||||||||||||| || |||||||||||||| Sbjct: 98270 atgatggtaacagcaagcagaatgccagttcctgaaccaatcgcacccatgaaatcagct 98329 Query: 384 agaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctg 443 ||||||||||||||||| ||||| ||||||||||||||||| ||||| | ||||| |||| Sbjct: 98330 agaacagtcaatgcaccaatgcacactccaccaaatgcagcggcagtggagatgtgtctg 98389 Query: 444 ttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttg 496 |||| ||||||||||||||||||||| | |||||| ||||| ||||||||||| Sbjct: 98390 ttcaattccttctgcaagtttgactcacaatggccaggcatcaccatttgttg 98442 Score = 163 bits (82), Expect = 8e-37 Identities = 109/118 (92%) Strand = Plus / Plus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||||||||| ||||| |||||||| || ||||| ||||| |||||||||||||| |||| Sbjct: 77755 ccttcagctgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttg 77814 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 77815 agaagagagcacaagctgacagcatgaagaccacatagaacaacgcatggaacggatt 77872 Score = 145 bits (73), Expect = 2e-31 Identities = 109/121 (90%) Strand = Plus / Plus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||||| ||| ||||| |||||||| || ||||| ||||| |||||||||||||| |||| Sbjct: 87375 ccttcaactgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttg 87434 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggattcg 618 ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 87435 agaagagagcacaagctgacagcatgaataccacatagaacagcgcatggaacggattcg 87494 Query: 619 c 619 | Sbjct: 87495 c 87495 Score = 50.1 bits (25), Expect = 0.009 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 129 aaataagtcgggcaacctaaacagaatttaa--tctccggttacaacca-aaacagccag 185 |||||||||||||||||||||| || ||||| ||||| ||||| ||| |||||||| | Sbjct: 86573 aaataagtcgggcaacctaaactgactttaagctctccaattacatccataaacagccgg 86632 Query: 186 ccaagcagtact 197 ||||| |||||| Sbjct: 86633 ccaagaagtact 86644 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgt 553 |||||| ||| ||| | |||||||| || ||||| ||||| |||||||||||||| Sbjct: 99779 ccttcaactgtttaacaacatcctttgcagatgagccagaaacttcaatccatgt 99833
>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0698G06 Length = 138282 Score = 311 bits (157), Expect = 1e-81 Identities = 215/235 (91%) Strand = Plus / Plus Query: 267 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggtatatg 326 |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 2688 ccaaagaaaccaagctcggttgccctctctttctcgaatgtctcgaagtactggtaaatg 2747 Query: 327 atggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcagccaga 386 |||||||||| | ||||||||| |||||||||||||| || |||||||||||||| ||| Sbjct: 2748 atggtaacagcaagcagaataccagttcctgaaccaatcgcacccatgaaatcagctaga 2807 Query: 387 acagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttc 446 |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 2808 acagtcaatgcaccaatgcacactccaccaaatgcagcagcagtggggatgtatctgttc 2867 Query: 447 agttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgntcct 501 | ||||||||||||||||||||| |||||||| ||||| ||||||||||| |||| Sbjct: 2868 aattccttctgcaagtttgactcacgatggccaggcatcaccatttgttgttcct 2922 Score = 204 bits (103), Expect = 2e-49 Identities = 201/233 (86%), Gaps = 7/233 (3%) Strand = Plus / Plus Query: 267 ccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac---tggtat 323 |||||||||||||||| || |||||||| ||||| ||||| |||||| ||||| Sbjct: 14196 ccaaagaaaccaagcttagttgccctctc----tcgaatgtctcgaagtacagctggtag 14251 Query: 324 atgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcagcc 383 ||||||||||||| | |||||| || |||||||||||||| || |||||||||||||| Sbjct: 14252 atgatggtaacagcaagcagaatgccagttcctgaaccaatcgcacccatgaaatcagct 14311 Query: 384 agaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctg 443 ||||||||||||||||| ||||| ||||||||||||||||| ||||| | ||||| |||| Sbjct: 14312 agaacagtcaatgcaccaatgcacactccaccaaatgcagcggcagtggagatgtgtctg 14371 Query: 444 ttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttg 496 |||| ||||||||||||||||||||| | |||||| ||||| ||||||||||| Sbjct: 14372 ttcaattccttctgcaagtttgactcacaatggccaggcatcaccatttgttg 14424 Score = 145 bits (73), Expect = 2e-31 Identities = 109/121 (90%) Strand = Plus / Plus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||||| ||| ||||| |||||||| || ||||| ||||| |||||||||||||| |||| Sbjct: 3357 ccttcaactgtttagcaacatcctttgcagatgagccagatacttcaatccatgtctttg 3416 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggattcg 618 ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 3417 agaagagagcacaagctgacagcatgaataccacatagaacagcgcatggaacggattcg 3476 Query: 619 c 619 | Sbjct: 3477 c 3477 Score = 50.1 bits (25), Expect = 0.009 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 129 aaataagtcgggcaacctaaacagaatttaa--tctccggttacaacca-aaacagccag 185 |||||||||||||||||||||| || ||||| ||||| ||||| ||| |||||||| | Sbjct: 2555 aaataagtcgggcaacctaaactgactttaagctctccaattacatccataaacagccgg 2614 Query: 186 ccaagcagtact 197 ||||| |||||| Sbjct: 2615 ccaagaagtact 2626 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgt 553 |||||| ||| ||| | |||||||| || ||||| ||||| |||||||||||||| Sbjct: 15761 ccttcaactgtttaacaacatcctttgcagatgagccagaaacttcaatccatgt 15815
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 256 bits (129), Expect = 8e-65 Identities = 214/243 (88%) Strand = Plus / Minus Query: 259 atcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtact 318 |||| |||||||||||||| |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 5867409 atcaaaacccaaagaaacctagctcggtagccctttctttctcgaatgtctcaaaatact 5867350 Query: 319 ggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaat 378 |||| ||||| ||||||| | ||| || || ||||||||||||||||| |||||||||| Sbjct: 5867349 ggtagatgattgtaacagcgagcagtatcccagttcctgaaccaattgcacccatgaaat 5867290 Query: 379 cagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgt 438 |||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 5867289 cagctaggacagtcaatgcaccaatgcagactccaccaaatgcagcagctgtagggatgt 5867230 Query: 439 atctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgnt 498 ||||||||| ||| ||||| || || ||||| |||||||||||||| ||||||||||| | Sbjct: 5867229 atctgttcaattctttctgtaaattcgactcacgatggcctggcatcaccatttgttgct 5867170 Query: 499 cct 501 ||| Sbjct: 5867169 cct 5867167 Score = 163 bits (82), Expect = 8e-37 Identities = 109/118 (92%) Strand = Plus / Minus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 5867073 ccttgagctgtttagcaacatcctttgctgatgaaccagatacttcaatccatgtctttg 5867014 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 5867013 agaagagagcacaagctgacagcatgaagaccacatagaacagtgcatggaatggatt 5866956
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 256 bits (129), Expect = 8e-65 Identities = 214/243 (88%) Strand = Plus / Minus Query: 259 atcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtact 318 |||| |||||||||||||| |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 96239 atcaaaacccaaagaaacctagctcggtagccctttctttctcgaatgtctcaaaatact 96180 Query: 319 ggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaat 378 |||| ||||| ||||||| | ||| || || ||||||||||||||||| |||||||||| Sbjct: 96179 ggtagatgattgtaacagcgagcagtatcccagttcctgaaccaattgcacccatgaaat 96120 Query: 379 cagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgt 438 |||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 96119 cagctaggacagtcaatgcaccaatgcagactccaccaaatgcagcagctgtagggatgt 96060 Query: 439 atctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgnt 498 ||||||||| ||| ||||| || || ||||| |||||||||||||| ||||||||||| | Sbjct: 96059 atctgttcaattctttctgtaaattcgactcacgatggcctggcatcaccatttgttgct 96000 Query: 499 cct 501 ||| Sbjct: 95999 cct 95997 Score = 163 bits (82), Expect = 8e-37 Identities = 109/118 (92%) Strand = Plus / Minus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 95903 ccttgagctgtttagcaacatcctttgctgatgaaccagatacttcaatccatgtctttg 95844 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 95843 agaagagagcacaagctgacagcatgaagaccacatagaacagtgcatggaatggatt 95786
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02, complete sequence Length = 128535 Score = 256 bits (129), Expect = 8e-65 Identities = 214/243 (88%) Strand = Plus / Minus Query: 259 atcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtact 318 |||| |||||||||||||| |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 17031 atcaaaacccaaagaaacctagctcggtagccctttctttctcgaatgtctcaaaatact 16972 Query: 319 ggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaat 378 |||| ||||| ||||||| | ||| || || ||||||||||||||||| |||||||||| Sbjct: 16971 ggtagatgattgtaacagcgagcagtatcccagttcctgaaccaattgcacccatgaaat 16912 Query: 379 cagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgt 438 |||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 16911 cagctaggacagtcaatgcaccaatgcagactccaccaaatgcagcagctgtagggatgt 16852 Query: 439 atctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgnt 498 ||||||||| ||| ||||| || || ||||| |||||||||||||| ||||||||||| | Sbjct: 16851 atctgttcaattctttctgtaaattcgactcacgatggcctggcatcaccatttgttgct 16792 Query: 499 cct 501 ||| Sbjct: 16791 cct 16789 Score = 163 bits (82), Expect = 8e-37 Identities = 109/118 (92%) Strand = Plus / Minus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 16695 ccttgagctgtttagcaacatcctttgctgatgaaccagatacttcaatccatgtctttg 16636 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 16635 agaagagagcacaagctgacagcatgaagaccacatagaacagtgcatggaatggatt 16578
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 256 bits (129), Expect = 8e-65 Identities = 214/243 (88%) Strand = Plus / Minus Query: 259 atcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtact 318 |||| |||||||||||||| |||||||| ||||| || |||||||| |||||||| |||| Sbjct: 5866622 atcaaaacccaaagaaacctagctcggtagccctttctttctcgaatgtctcaaaatact 5866563 Query: 319 ggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaat 378 |||| ||||| ||||||| | ||| || || ||||||||||||||||| |||||||||| Sbjct: 5866562 ggtagatgattgtaacagcgagcagtatcccagttcctgaaccaattgcacccatgaaat 5866503 Query: 379 cagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgt 438 |||| || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 5866502 cagctaggacagtcaatgcaccaatgcagactccaccaaatgcagcagctgtagggatgt 5866443 Query: 439 atctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgnt 498 ||||||||| ||| ||||| || || ||||| |||||||||||||| ||||||||||| | Sbjct: 5866442 atctgttcaattctttctgtaaattcgactcacgatggcctggcatcaccatttgttgct 5866383 Query: 499 cct 501 ||| Sbjct: 5866382 cct 5866380 Score = 163 bits (82), Expect = 8e-37 Identities = 109/118 (92%) Strand = Plus / Minus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||| Sbjct: 5866286 ccttgagctgtttagcaacatcctttgctgatgaaccagatacttcaatccatgtctttg 5866227 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 5866226 agaagagagcacaagctgacagcatgaagaccacatagaacagtgcatggaatggatt 5866169
>ref|NM_001036399.1| Arabidopsis thaliana protein translocase AT2G34250 transcript variant AT2G34250.2 mRNA, complete cds Length = 1961 Score = 242 bits (122), Expect = 1e-60 Identities = 270/320 (84%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||||| |||||||| || |||||||||||||| || || | ||||||||| |||||| Sbjct: 1631 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 1572 Query: 354 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 413 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 1571 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 1512 Query: 414 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 473 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 1511 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 1452 Query: 474 tggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaa 533 || |||||||| ||||||||||| ||||| ||||||||||| |||||| | || || || Sbjct: 1451 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 1392 Query: 534 ccagagacttcaatccatgtttttgagaagagagcacatgctgacagcatgaagaccaca 593 |||||||||||||||||||| |||||||| |||||||| || | ||||||||||| | Sbjct: 1391 ccagagacttcaatccatgtctttgagaaaagagcacaagcagtgagcatgaagacgatg 1332 Query: 594 tagaacaatgcatggaacgg 613 ||||||| |||||||||||| Sbjct: 1331 tagaacagtgcatggaacgg 1312
>ref|NM_128976.2| Arabidopsis thaliana protein translocase AT2G34250 transcript variant AT2G34250.1 mRNA, complete cds Length = 1882 Score = 242 bits (122), Expect = 1e-60 Identities = 270/320 (84%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||||| |||||||| || |||||||||||||| || || | ||||||||| |||||| Sbjct: 1558 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 1499 Query: 354 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 413 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 1498 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 1439 Query: 414 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 473 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 1438 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 1379 Query: 474 tggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaa 533 || |||||||| ||||||||||| ||||| ||||||||||| |||||| | || || || Sbjct: 1378 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 1319 Query: 534 ccagagacttcaatccatgtttttgagaagagagcacatgctgacagcatgaagaccaca 593 |||||||||||||||||||| |||||||| |||||||| || | ||||||||||| | Sbjct: 1318 ccagagacttcaatccatgtctttgagaaaagagcacaagcagtgagcatgaagacgatg 1259 Query: 594 tagaacaatgcatggaacgg 613 ||||||| |||||||||||| Sbjct: 1258 tagaacagtgcatggaacgg 1239
>gb|BT000507.1| Arabidopsis thaliana endoplasmic reticulum insertion protein (At2g34250/F13P17.9) mRNA, complete cds Length = 1428 Score = 242 bits (122), Expect = 1e-60 Identities = 270/320 (84%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||||| |||||||| || |||||||||||||| || || | ||||||||| |||||| Sbjct: 1394 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 1335 Query: 354 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 413 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 1334 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 1275 Query: 414 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 473 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 1274 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 1215 Query: 474 tggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaa 533 || |||||||| ||||||||||| ||||| ||||||||||| |||||| | || || || Sbjct: 1214 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 1155 Query: 534 ccagagacttcaatccatgtttttgagaagagagcacatgctgacagcatgaagaccaca 593 |||||||||||||||||||| |||||||| |||||||| || | ||||||||||| | Sbjct: 1154 ccagagacttcaatccatgtctttgagaaaagagcacaagcagtgagcatgaagacgatg 1095 Query: 594 tagaacaatgcatggaacgg 613 ||||||| |||||||||||| Sbjct: 1094 tagaacagtgcatggaacgg 1075
>gb|AF367298.1| Arabidopsis thaliana At2g34250/F13P17.9 mRNA, complete cds Length = 1804 Score = 242 bits (122), Expect = 1e-60 Identities = 270/320 (84%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||||| |||||||| || |||||||||||||| || || | ||||||||| |||||| Sbjct: 1532 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 1473 Query: 354 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 413 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 1472 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 1413 Query: 414 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 473 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 1412 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 1353 Query: 474 tggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaa 533 || |||||||| ||||||||||| ||||| ||||||||||| |||||| | || || || Sbjct: 1352 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 1293 Query: 534 ccagagacttcaatccatgtttttgagaagagagcacatgctgacagcatgaagaccaca 593 |||||||||||||||||||| |||||||| |||||||| || | ||||||||||| | Sbjct: 1292 ccagagacttcaatccatgtctttgagaaaagagcacaagcagtgagcatgaagacgatg 1233 Query: 594 tagaacaatgcatggaacgg 613 ||||||| |||||||||||| Sbjct: 1232 tagaacagtgcatggaacgg 1213
>emb|BX821829.1|CNS0A807 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL78ZE02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1831 Score = 242 bits (122), Expect = 1e-60 Identities = 270/320 (84%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||||| |||||||| || |||||||||||||| || || | ||||||||| |||||| Sbjct: 1542 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 1483 Query: 354 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 413 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 1482 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 1423 Query: 414 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 473 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 1422 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 1363 Query: 474 tggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaa 533 || |||||||| ||||||||||| ||||| ||||||||||| |||||| | || || || Sbjct: 1362 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 1303 Query: 534 ccagagacttcaatccatgtttttgagaagagagcacatgctgacagcatgaagaccaca 593 |||||||||||||||||||| |||||||| |||||||| || | ||||||||||| | Sbjct: 1302 ccagagacttcaatccatgtctttgagaaaagagcacaagcagtgagcatgaagacgatg 1243 Query: 594 tagaacaatgcatggaacgg 613 ||||||| |||||||||||| Sbjct: 1242 tagaacagtgcatggaacgg 1223
>gb|AY088235.1| Arabidopsis thaliana clone 4598 mRNA, complete sequence Length = 1821 Score = 242 bits (122), Expect = 1e-60 Identities = 270/320 (84%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||||| |||||||| || |||||||||||||| || || | ||||||||| |||||| Sbjct: 1558 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 1499 Query: 354 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 413 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 1498 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 1439 Query: 414 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 473 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 1438 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 1379 Query: 474 tggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaa 533 || |||||||| ||||||||||| ||||| ||||||||||| |||||| | || || || Sbjct: 1378 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 1319 Query: 534 ccagagacttcaatccatgtttttgagaagagagcacatgctgacagcatgaagaccaca 593 |||||||||||||||||||| |||||||| |||||||| || | ||||||||||| | Sbjct: 1318 ccagagacttcaatccatgtctttgagaaaagagcacaagcagtgagcatgaagacgatg 1259 Query: 594 tagaacaatgcatggaacgg 613 ||||||| |||||||||||| Sbjct: 1258 tagaacagtgcatggaacgg 1239
>gb|AF190652.1|AF190652 Phaseolus vulgaris putative integral membrane protein (sec61) mRNA, sec61-1 allele, complete cds Length = 2150 Score = 208 bits (105), Expect = 2e-50 Identities = 295/359 (82%) Strand = Plus / Minus Query: 258 aatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtac 317 |||||||| |||||||| |||||||| | || ||||||||||| || ||||| |||||| Sbjct: 1478 aatcagaaaccaaagaagccaagctcactagctctctccttctcaaatgtctcgaagtac 1419 Query: 318 tggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaa 377 || |||||||| || || | | || || || || |||||||| ||||| ||||||||| Sbjct: 1418 tgatatatgattgttactgcaagcaatattccagtccctgaaccgattgcccccatgaaa 1359 Query: 378 tcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatg 437 || |||| ||||||| ||||| || || | || |||||||| |||||||| || ||| Sbjct: 1358 tctgccaacacagtcagagcaccaatacaaatgcctccaaatgctgcagcagtgggaatg 1299 Query: 438 tatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgn 497 |||| ||||| ||| ||||||| ||||||||| ||||| || ||||| ||||||||||| Sbjct: 1298 tatcggttcaattctttctgcaggtttgactcccgatgtccaggcattaccatttgttgc 1239 Query: 498 tccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgttttt 557 ||||||||||| || || ||||| || || ||||||||||||||||||||||| ||||| Sbjct: 1238 tccttcagctgttttgcaacatctttagcagatgaaccagagacttcaatccaagtttta 1179 Query: 558 gagaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 ||||| | ||||||||||||| ||| || || | ||||||||||||||||| ||||| Sbjct: 1178 gagaacaaggcacatgctgacaacataaacacaaggtagaacaatgcatggaaaggatt 1120
>emb|BX820660.1|CNS0A8Q9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 567 Score = 186 bits (94), Expect = 6e-44 Identities = 212/252 (84%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||||| |||||||| || |||||||||||||| || || | ||||||||| |||||| Sbjct: 252 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 193 Query: 354 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 413 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 192 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 133 Query: 414 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 473 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 132 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 73 Query: 474 tggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaa 533 || |||||||| ||||||||||| ||||| ||||||||||| |||||| | || || || Sbjct: 72 tgtcctggcatcaccatttgttgttcctttagctgcttagctacatccctagcagaagat 13 Query: 534 ccagagacttca 545 |||||||||||| Sbjct: 12 ccagagacttca 1
>ref|NM_102671.2| Arabidopsis thaliana protein translocase AT1G29310 mRNA, complete cds Length = 1688 Score = 176 bits (89), Expect = 6e-41 Identities = 291/359 (81%) Strand = Plus / Minus Query: 257 caatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagta 316 ||||||||| |||||||||||||||||| | || | |||||||| ||||| ||||| || Sbjct: 1527 caatcagaatccaaagaaaccaagctcgctggctttttccttctcaaaggtttcaaaata 1468 Query: 317 ctggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaa 376 ||| |||||||| || || | | | || || || || || ||||| || |||||||| Sbjct: 1467 ctgatatatgattgtgactgcaagtaagattccagtccccgacccaatggctcccatgaa 1408 Query: 377 atcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggat 436 |||||||| |||||| | ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 1407 atcagccaaaacagtgagcgcaccgatgcacactcctccaaatgcagccgctgttgggat 1348 Query: 437 gtatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttg 496 ||| | |||||| ||||| || ||||| ||||| | || || ||||| ||||||||||| Sbjct: 1347 gtaccggttcagctccttttgtaagttggactctctgtgtcccggcatcaccatttgttg 1288 Query: 497 ntccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttt 556 ||||| ||||||||||| ||||| | || || || || |||||||||||||||||||| Sbjct: 1287 ttcctttagctgcttagctacatctctagcagaagacccggagacttcaatccatgtttt 1228 Query: 557 tgagaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggat 615 |||||| || ||||| || | ||||||||||| | |||||||| |||||||| |||| Sbjct: 1227 tgagaatagggcacaagcagtgagcatgaagacgatatagaacagagcatggaatggat 1169
>gb|AY093047.1| Arabidopsis thaliana putative protein transport protein SEC61 alpha subunit (At1g29310) mRNA, complete cds Length = 1686 Score = 176 bits (89), Expect = 6e-41 Identities = 291/359 (81%) Strand = Plus / Minus Query: 257 caatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagta 316 ||||||||| |||||||||||||||||| | || | |||||||| ||||| ||||| || Sbjct: 1525 caatcagaatccaaagaaaccaagctcgctggctttttccttctcaaaggtttcaaaata 1466 Query: 317 ctggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaa 376 ||| |||||||| || || | | | || || || || || ||||| || |||||||| Sbjct: 1465 ctgatatatgattgtgactgcaagtaagattccagtccccgacccaatggctcccatgaa 1406 Query: 377 atcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggat 436 |||||||| |||||| | ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 1405 atcagccaaaacagtgagcgcaccgatgcacactcctccaaatgcagccgctgttgggat 1346 Query: 437 gtatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttg 496 ||| | |||||| ||||| || ||||| ||||| | || || ||||| ||||||||||| Sbjct: 1345 gtaccggttcagctccttttgtaagttggactctctgtgtcccggcatcaccatttgttg 1286 Query: 497 ntccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttt 556 ||||| ||||||||||| ||||| | || || || || |||||||||||||||||||| Sbjct: 1285 ttcctttagctgcttagctacatctctagcagaagacccggagacttcaatccatgtttt 1226 Query: 557 tgagaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggat 615 |||||| || ||||| || | ||||||||||| | |||||||| |||||||| |||| Sbjct: 1225 tgagaatagggcacaagcagtgagcatgaagacgatatagaacagagcatggaatggat 1167
>gb|AY087495.1| Arabidopsis thaliana clone 36037 mRNA, complete sequence Length = 1595 Score = 161 bits (81), Expect = 3e-36 Identities = 289/359 (80%) Strand = Plus / Minus Query: 257 caatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagta 316 ||||||||| |||||||||||||||||| | || | |||||||| ||||| ||||| || Sbjct: 1527 caatcagaatccaaagaaaccaagctcgctggctttttccttctcaaaggtttcaaaata 1468 Query: 317 ctggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaa 376 ||| |||||||| || || | | | || || || || || ||||| || | |||||| Sbjct: 1467 ctgatatatgattgtgactgcaagtaagattccagtccccgacccaatggctctcatgaa 1408 Query: 377 atcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggat 436 |||||||| |||||| | ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 1407 atcagccaaaacagtgagcgcaccgatgcacactcctccaaatgcagccgctgttgggat 1348 Query: 437 gtatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttg 496 ||| | |||||| ||||| || ||||| ||||| | || || ||||| ||||||||||| Sbjct: 1347 gtaccggttcagctccttttgtaagttggactctctgtgtcccggcatcaccatttgttg 1288 Query: 497 ntccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttt 556 ||||| |||||||||| ||||| | || || || || |||||||||||||||||||| Sbjct: 1287 ttcctttagctgcttagatacatctctagcagaagacccggagacttcaatccatgtttt 1228 Query: 557 tgagaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggat 615 |||||| || ||||| || | ||||||||||| | |||||||| |||||||| |||| Sbjct: 1227 tgagaatagggcacaagcagtgagcatgaagacgatatagaacagagcatggaatggat 1169
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 155 bits (78), Expect = 2e-34 Identities = 175/208 (84%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||||| |||||||| || |||||||||||||| || || | ||||||||| |||||| Sbjct: 35025 tccttctcaaaggtctcgaaatactggtatatgatcgtgaccgccaacagaattccggtt 34966 Query: 354 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 413 || || || || || |||||||||||||||| ||| || | ||||||||| || ||||| Sbjct: 34965 cccgacccgatggctcccatgaaatcagccaaaacggtaagtgcaccgatacaaactcct 34906 Query: 414 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 473 ||||| || || || || |||||||||||||||||||||||||| |||||||| || | Sbjct: 34905 ccaaaagctgctgctgttgggatgtatctgttcagttccttctgtaagtttgattctctg 34846 Query: 474 tggcctggcataaccatttgttgntcct 501 || |||||||| ||||||||||| |||| Sbjct: 34845 tgtcctggcatcaccatttgttgttcct 34818 Score = 93.7 bits (47), Expect = 7e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||| ||||||||||| |||||| | || || || |||||||||||||||||||| |||| Sbjct: 34735 cctttagctgcttagctacatccctagcagaagatccagagacttcaatccatgtctttg 34676 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacgg 613 |||| |||||||| || | ||||||||||| | ||||||| |||||||||||| Sbjct: 34675 agaaaagagcacaagcagtgagcatgaagacgatgtagaacagtgcatggaacgg 34621
>gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28N24 genomic sequence, complete sequence Length = 154716 Score = 109 bits (55), Expect = 1e-20 Identities = 197/245 (80%) Strand = Plus / Plus Query: 257 caatcagaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagta 316 ||||||||| |||||||||||||||||| | || | |||||||| ||||| ||||| || Sbjct: 8861 caatcagaatccaaagaaaccaagctcgctggctttttccttctcaaaggtttcaaaata 8920 Query: 317 ctggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaa 376 ||| |||||||| || || | | | || || || || || ||||| || |||||||| Sbjct: 8921 ctgatatatgattgtgactgcaagtaagattccagtccccgacccaatggctcccatgaa 8980 Query: 377 atcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggat 436 |||||||| |||||| | ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 8981 atcagccaaaacagtgagcgcaccgatgcacactcctccaaatgcagccgctgttgggat 9040 Query: 437 gtatctgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttg 496 ||| | |||||| ||||| || ||||| ||||| | || || ||||| ||||||||||| Sbjct: 9041 gtaccggttcagctccttttgtaagttggactctctgtgtcccggcatcaccatttgttg 9100 Query: 497 ntcct 501 |||| Sbjct: 9101 ttcct 9105 Score = 73.8 bits (37), Expect = 6e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttg 558 |||| ||||||||||| ||||| | || || || || |||||||||||||||||||||| Sbjct: 9189 cctttagctgcttagctacatctctagcagaagacccggagacttcaatccatgtttttg 9248 Query: 559 agaagagagcacatgctgacagcatgaagaccacatagaacaatgcatggaacggat 615 |||| || ||||| || | ||||||||||| | |||||||| |||||||| |||| Sbjct: 9249 agaatagggcacaagcagtgagcatgaagacgatatagaacagagcatggaatggat 9305
>ref|NM_106519.1| Arabidopsis thaliana protein translocase AT1G78720 mRNA, complete cds Length = 1428 Score = 99.6 bits (50), Expect = 1e-17 Identities = 169/209 (80%) Strand = Plus / Minus Query: 354 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 413 ||||| ||||| || ||||| |||||||||| ||||| | ||||||||| || | ||| Sbjct: 1334 cctgacccaatagctcccattaaatcagccaagacagtgagtgcaccgatacacagacca 1275 Query: 414 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 473 ||||| || ||||| || || ||||||| |||||||||||| || | |||||| || || Sbjct: 1274 ccaaaagctgcagccgtgggaatgtatcggttcagttccttttgaaggtttgagtctcgg 1215 Query: 474 tggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaa 533 || || ||||| |||||||| || || | || || | |||||||| |||||||||||| Sbjct: 1214 tgaccaggcattaccatttgctgttctcttagttgtctggcgacatctttggctgatgaa 1155 Query: 534 ccagagacttcaatccatgtttttgagaa 562 || |||||||||||||| ||||| ||||| Sbjct: 1154 ccggagacttcaatccaggttttagagaa 1126
>gb|AC121241.32| Medicago truncatula clone mth2-4n3, complete sequence Length = 114591 Score = 99.6 bits (50), Expect = 1e-17 Identities = 192/240 (80%) Strand = Plus / Plus Query: 262 agaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggt 321 |||| |||||||||||||||||| | || || |||||||| || |||||||||||||| | Sbjct: 23781 agaaaccaaagaaaccaagctcgctggctctttccttctcaaatgtctcaaagtactgat 23840 Query: 322 atatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcag 381 | ||||| || || | | | || ||||| || ||||||||||| ||||||||||| | Sbjct: 23841 agatgattgttactgcaagtaatattccggtcccggaaccaattgcacccatgaaatctg 23900 Query: 382 ccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatc 441 ||| || || | ||||| || || | ||| ||||||||||||||||| || || |||| Sbjct: 23901 ccaatactgttagggcaccaatacacattcctccaaatgcagcagcagtgggaatatatc 23960 Query: 442 tgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgntcct 501 |||||| || || ||||| ||||| || ||||| || ||||| ||||||||||| |||| Sbjct: 23961 ggttcagctctttttgcaaatttgattcccgatgaccaggcattaccatttgttgttcct 24020 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 531 gaaccagagacttcaatccatgtttttgagaagagagcacatgctgacagcatgaagacc 590 |||||||| ||||||||||| ||||| ||||| | ||||||||||||| ||| || || Sbjct: 24480 gaaccagacacttcaatccaagttttagagaacaaggcacatgctgacaacataaacaca 24539 Query: 591 acatagaacaatgcatggaacggatt 616 | ||||||||||||||||| ||||| Sbjct: 24540 aggtagaacaatgcatggaaaggatt 24565
>gb|AC146749.23| Medicago truncatula clone mth2-145a1, complete sequence Length = 130793 Score = 99.6 bits (50), Expect = 1e-17 Identities = 192/240 (80%) Strand = Plus / Minus Query: 262 agaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggt 321 |||| |||||||||||||||||| | || || |||||||| || |||||||||||||| | Sbjct: 111020 agaaaccaaagaaaccaagctcgctggctctttccttctcaaatgtctcaaagtactgat 110961 Query: 322 atatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcag 381 | ||||| || || | | | || ||||| || ||||||||||| ||||||||||| | Sbjct: 110960 agatgattgttactgcaagtaatattccggtcccggaaccaattgcacccatgaaatctg 110901 Query: 382 ccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatc 441 ||| || || | ||||| || || | ||| ||||||||||||||||| || || |||| Sbjct: 110900 ccaatactgttagggcaccaatacacattcctccaaatgcagcagcagtgggaatatatc 110841 Query: 442 tgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgntcct 501 |||||| || || ||||| ||||| || ||||| || ||||| ||||||||||| |||| Sbjct: 110840 ggttcagctctttttgcaaatttgattcccgatgaccaggcattaccatttgttgttcct 110781 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 531 gaaccagagacttcaatccatgtttttgagaagagagcacatgctgacagcatgaagacc 590 |||||||| ||||||||||| ||||| ||||| | ||||||||||||| ||| || || Sbjct: 110321 gaaccagacacttcaatccaagttttagagaacaaggcacatgctgacaacataaacaca 110262 Query: 591 acatagaacaatgcatggaacggatt 616 | ||||||||||||||||| ||||| Sbjct: 110261 aggtagaacaatgcatggaaaggatt 110236
>gb|BC045117.1| Xenopus laevis protein transport protein SEC61 alpha subunit isoform 1, mRNA (cDNA clone MGC:53497 IMAGE:5572471), complete cds Length = 1894 Score = 85.7 bits (43), Expect = 2e-13 Identities = 117/142 (82%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| ||||||| ||||| || |||||||| |||| |||||| ||||| ||||| |||| Sbjct: 1464 cgaagatctcaaaatactgatagatgatggtgacagccaacaggatacctgttccagaac 1405 Query: 361 caattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatg 420 |||| || |||| |||||| ||||| |||| | ||| |||||||| | || ||||| | Sbjct: 1404 caatggctcccaggaaatctgccaggacagagagtgctccgatgcaaagacctccaaaag 1345 Query: 421 cagcagcagtagggatgtatct 442 ||||||| || ||||||||||| Sbjct: 1344 cagcagctgttgggatgtatct 1323 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 516 acatccttggctgatgaaccagagacttcaatccatgtttttgagaaga 564 |||||||| || || || ||||| ||||||||||| || |||||||||| Sbjct: 1249 acatcctttgcagaagagccagacacttcaatccaggtctttgagaaga 1201
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 75.8 bits (38), Expect = 2e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 292 tctccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccgg 351 ||||||||||| | ||||| ||||||||||| |||||||| |||| || ||| ||||||| Sbjct: 43536 tctccttctcgtacgtctcgaagtactggtaaatgatggtcacagccagcaggataccgg 43477 Query: 352 ttcctgaaccaattgcgcccatgaa 376 | || || ||||| ||||||||||| Sbjct: 43476 tgcccgagccaatggcgcccatgaa 43452
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 75.8 bits (38), Expect = 2e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 292 tctccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccgg 351 ||||||||||| | ||||| ||||||||||| |||||||| |||| || ||| ||||||| Sbjct: 22249 tctccttctcgtacgtctcgaagtactggtaaatgatggtcacagccagcaggataccgg 22190 Query: 352 ttcctgaaccaattgcgcccatgaa 376 | || || ||||| ||||||||||| Sbjct: 22189 tgcccgagccaatggcgcccatgaa 22165
>ref|XM_507657.1| PREDICTED: Pan troglodytes similar to Sec61 alpha isoform 2 (LOC450305), mRNA Length = 1714 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| || ||| Sbjct: 1467 ttcagctgtttagctacatctttggctgaggaaccagacacttcaatccatgtcttagag 1408 Query: 561 aagagagcacatg 573 |||| ||||||| Sbjct: 1407 aagaatgcacatg 1395
>ref|NM_018144.2| Homo sapiens Sec61 alpha 2 subunit (S. cerevisiae) (SEC61A2), mRNA Length = 1892 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| || ||| Sbjct: 1272 ttcagctgtttagctacatctttggctgaggaaccagacacttcaatccatgtcttagag 1213 Query: 561 aagagagcacatg 573 |||| ||||||| Sbjct: 1212 aagaatgcacatg 1200
>emb|CR925994.1| Pongo pygmaeus mRNA; cDNA DKFZp459O1320 (from clone DKFZp459O1320) Length = 2508 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| || ||| Sbjct: 1352 ttcagctgtttagctacatctttggctgaggaaccagacacttcaatccatgtcttagag 1293 Query: 561 aagagagcacatg 573 |||| ||||||| Sbjct: 1292 aagaatgcacatg 1280
>gb|BC026179.1| Homo sapiens Sec61 alpha 2 subunit (S. cerevisiae), mRNA (cDNA clone MGC:32910 IMAGE:4823130), complete cds Length = 2220 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| || ||| Sbjct: 1281 ttcagctgtttagctacatctttggctgaggaaccagacacttcaatccatgtcttagag 1222 Query: 561 aagagagcacatg 573 |||| ||||||| Sbjct: 1221 aagaatgcacatg 1209
>emb|CR607709.1| full-length cDNA clone CS0DE010YO18 of Placenta of Homo sapiens (human) Length = 1710 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| || ||| Sbjct: 571 ttcagctgtttagctacatctttggctgaggaaccagacacttcaatccatgtcttagag 512 Query: 561 aagagagcacatg 573 |||| ||||||| Sbjct: 511 aagaatgcacatg 499
>dbj|AK057532.1| Homo sapiens cDNA FLJ32970 fis, clone TESTI2008840, highly similar to PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT Length = 2305 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| || ||| Sbjct: 1405 ttcagctgtttagctacatctttggctgaggaaccagacacttcaatccatgtcttagag 1346 Query: 561 aagagagcacatg 573 |||| ||||||| Sbjct: 1345 aagaatgcacatg 1333
>dbj|AK022027.1| Homo sapiens cDNA FLJ11965 fis, clone HEMBB1001112, moderately similar to Homo sapiens sec61 homolog mRNA Length = 1334 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| || ||| Sbjct: 714 ttcagctgtttagctacatctttggctgaggaaccagacacttcaatccatgtcttagag 655 Query: 561 aagagagcacatg 573 |||| ||||||| Sbjct: 654 aagaatgcacatg 642
>dbj|AK022640.1| Homo sapiens cDNA FLJ12578 fis, clone NT2RM4001054, moderately similar to Homo sapiens sec61 homolog mRNA Length = 2026 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| || ||| Sbjct: 1266 ttcagctgtttagctacatctttggctgaggaaccagacacttcaatccatgtcttagag 1207 Query: 561 aagagagcacatg 573 |||| ||||||| Sbjct: 1206 aagaatgcacatg 1194
>dbj|AK001440.1| Homo sapiens cDNA FLJ10578 fis, clone NT2RP2003433, highly similar to PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT Length = 1186 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| || ||| Sbjct: 566 ttcagctgtttagctacatctttggctgaggaaccagacacttcaatccatgtcttagag 507 Query: 561 aagagagcacatg 573 |||| ||||||| Sbjct: 506 aagaatgcacatg 494
>gb|AF346603.1|AF346603 Homo sapiens Sec61 alpha form 2 mRNA, complete cds Length = 1893 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| || ||| Sbjct: 1272 ttcagctgtttagctacatctttggctgaggaaccagacacttcaatccatgtcttagag 1213 Query: 561 aagagagcacatg 573 |||| ||||||| Sbjct: 1212 aagaatgcacatg 1200
>ref|NM_016906.2| Mus musculus Sec61 alpha 1 subunit (S. cerevisiae) (Sec61a1), mRNA Length = 3040 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| |||||||| Sbjct: 1308 accatctgctgctccttcagctgctttgcaacatctttggcagaagaacctgagacttcg 1249 Query: 546 atccatgtttttgagaaga 564 ||||||||||| ||||||| Sbjct: 1248 atccatgttttggagaaga 1230 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggt 331 ||||| |||||||||||||||| |||||||| Sbjct: 1493 cgaagatctcaaagtactggtagatgatggt 1463
>gb|BC006020.1| Mus musculus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone IMAGE:3488736) Length = 2641 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| |||||||| Sbjct: 892 accatctgctgctccttcagctgctttgcaacatctttggcagaagaacctgagacttcg 833 Query: 546 atccatgtttttgagaaga 564 ||||||||||| ||||||| Sbjct: 832 atccatgttttggagaaga 814 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggt 331 ||||| |||||||||||||||| |||||||| Sbjct: 1077 cgaagatctcaaagtactggtagatgatggt 1047
>gb|BC003707.1| Mus musculus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone MGC:5676 IMAGE:3592772), complete cds Length = 2982 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| |||||||| Sbjct: 1233 accatctgctgctccttcagctgctttgcaacatctttggcagaagaacctgagacttcg 1174 Query: 546 atccatgtttttgagaaga 564 ||||||||||| ||||||| Sbjct: 1173 atccatgttttggagaaga 1155 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggt 331 ||||| |||||||||||||||| |||||||| Sbjct: 1418 cgaagatctcaaagtactggtagatgatggt 1388
>dbj|AK153055.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830120D02 product:Sec61 alpha 1 subunit (S. cerevisiae), full insert sequence Length = 3029 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| |||||||| Sbjct: 1297 accatctgctgctccttcagctgctttgcaacatctttggcagaagaacctgagacttcg 1238 Query: 546 atccatgtttttgagaaga 564 ||||||||||| ||||||| Sbjct: 1237 atccatgttttggagaaga 1219 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggt 331 ||||| |||||||||||||||| |||||||| Sbjct: 1482 cgaagatctcaaagtactggtagatgatggt 1452
>dbj|AK159349.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420017L22 product:Sec61 alpha 1 subunit (S. cerevisiae), full insert sequence Length = 3025 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| |||||||| Sbjct: 1295 accatctgctgctccttcagctgctttgcaacatctttggcagaagaacctgagacttcg 1236 Query: 546 atccatgtttttgagaaga 564 ||||||||||| ||||||| Sbjct: 1235 atccatgttttggagaaga 1217 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggt 331 ||||| |||||||||||||||| |||||||| Sbjct: 1480 cgaagatctcaaagtactggtagatgatggt 1450
>dbj|AK167484.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530016O21 product:Sec61 alpha 1 subunit (S. cerevisiae), full insert sequence Length = 2968 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| |||||||| Sbjct: 1237 accatctgctgctccttcagctgctttgcaacatctttggcagaagaacctgagacttcg 1178 Query: 546 atccatgtttttgagaaga 564 ||||||||||| ||||||| Sbjct: 1177 atccatgttttggagaaga 1159 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggt 331 ||||| |||||||||||||||| |||||||| Sbjct: 1422 cgaagatctcaaagtactggtagatgatggt 1392
>dbj|AK088473.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430018I05 product:SEC61, alpha subunit (S. cerevisiae), full insert sequence Length = 3040 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| |||||||| Sbjct: 1308 accatctgctgctccttcagctgctttgcaacatctttggcagaagaacctgagacttcg 1249 Query: 546 atccatgtttttgagaaga 564 ||||||||||| ||||||| Sbjct: 1248 atccatgttttggagaaga 1230 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggt 331 ||||| |||||||||||||||| |||||||| Sbjct: 1493 cgaagatctcaaagtactggtagatgatggt 1463
>gb|AF222743.1|AF222743 Mus musculus Sec61 alpha-1 mRNA, complete cds Length = 1482 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| |||||||| Sbjct: 1229 accatctgctgctccttcagctgctttgcaacatctttggcagaagaacctgagacttcg 1170 Query: 546 atccatgtttttgagaaga 564 ||||||||||| ||||||| Sbjct: 1169 atccatgttttggagaaga 1151 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggt 331 ||||| |||||||||||||||| |||||||| Sbjct: 1414 cgaagatctcaaagtactggtagatgatggt 1384
>gb|AF145253.1|AF145253 Mus musculus Sec61 alpha isoform 1 mRNA, complete cds Length = 1482 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| |||||||| Sbjct: 1229 accatctgctgctccttcagctgctttgcaacatctttggcagaagaacctgagacttcg 1170 Query: 546 atccatgtttttgagaaga 564 ||||||||||| ||||||| Sbjct: 1169 atccatgttttggagaaga 1151 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggt 331 ||||| |||||||||||||||| |||||||| Sbjct: 1414 cgaagatctcaaagtactggtagatgatggt 1384
>ref|XM_414364.1| PREDICTED: Gallus gallus similar to Sec61 alpha subunit homolog (LOC416023), mRNA Length = 2667 Score = 69.9 bits (35), Expect = 9e-09 Identities = 82/98 (83%) Strand = Plus / Minus Query: 474 tggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaa 533 |||||| |||| |||||||| || || |||| || || || ||||| ||||| || || Sbjct: 1694 tggcctcgcattaccatttgctgttctttcaattgtttggcaacatctttggcagaggag 1635 Query: 534 ccagagacttcaatccatgtttttgagaagagagcaca 571 ||||||||||||||||||||||| ||||||| |||||| Sbjct: 1634 ccagagacttcaatccatgttttagagaagaaagcaca 1597
>gb|AC125480.33| Medicago truncatula clone mth2-8c24, complete sequence Length = 119718 Score = 67.9 bits (34), Expect = 4e-08 Identities = 188/240 (78%) Strand = Plus / Minus Query: 262 agaacccaaagaaaccaagctcggtcgccctctccttctcgaaggtctcaaagtactggt 321 |||| |||||||| |||||||| | || || |||||||| || || ||||||||||| | Sbjct: 29536 agaaaccaaagaagccaagctcactggctctttccttctcaaatgtttcaaagtactgat 29477 Query: 322 atatgatggtaacagncaacagaataccggttcctgaaccaattgcgcccatgaaatcag 381 | ||||| || || | | || ||| || || |||||||| ||||| ||||| ||||| | Sbjct: 29476 agatgatcgttactgcaagcaaaatccccgtccctgaacctattgctcccataaaatctg 29417 Query: 382 ccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagcagtagggatgtatc 441 ||| || |||| ||||| || || | || || ||||| |||||||| |||||||||| Sbjct: 29416 ccaacactgtcagagcaccaatacaaatgcctccgaatgctgcagcagtggggatgtatc 29357 Query: 442 tgttcagttccttctgcaagtttgactcgcgatggcctggcataaccatttgttgntcct 501 ||| || || ||||||||||| || || || || || ||||| ||||||||||| |||| Sbjct: 29356 ggtttagctctttctgcaagttcgattcacggtgtccaggcatcaccatttgttgttcct 29297 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 507 tgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgagaagaga 566 ||||| || |||||| | || |||||||||||||| |||||||| ||||| ||||| | Sbjct: 28443 tgctttgcaacatccctagcagatgaaccagagacctcaatccaagttttagagaacaag 28384 Query: 567 gcacatgctgacagcatgaagaccacatagaacaatgcatggaacggatt 616 |||||||| || ||||| || || | ||||||||| |||||||| ||||| Sbjct: 28383 gcacatgcagatagcataaacacaagatagaacaaagcatggaaaggatt 28334
>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence Length = 90425 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 513 gcgacatccttggctgatgaaccagagacttcaatccatgtttttgagaa 562 |||||||| |||||||||||||| |||||||||||||| ||||| ||||| Sbjct: 70742 gcgacatctttggctgatgaaccggagacttcaatccaggttttagagaa 70791 Score = 65.9 bits (33), Expect = 1e-07 Identities = 119/148 (80%) Strand = Plus / Plus Query: 354 cctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcca 413 ||||| ||||| || ||||| |||||||||| ||||| | ||||||||| || | ||| Sbjct: 70473 cctgacccaatagctcccattaaatcagccaagacagtgagtgcaccgatacacagacca 70532 Query: 414 ccaaatgcagcagcagtagggatgtatctgttcagttccttctgcaagtttgactcgcga 473 ||||| || ||||| || || ||||||| |||||||||||| || | |||||| || || Sbjct: 70533 ccaaaagctgcagccgtgggaatgtatcggttcagttccttttgaaggtttgagtctcgg 70592 Query: 474 tggcctggcataaccatttgttgntcct 501 || || ||||| |||||||| || |||| Sbjct: 70593 tgaccaggcattaccatttgctgttcct 70620
>ref|XM_660476.1| Cryptosporidium hominis TU502 Pfsec61 (Chro.70118) partial mRNA Length = 1422 Score = 65.9 bits (33), Expect = 1e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 482 cataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagac 541 ||||| ||||||||| || | ||||| || || |||||||| || || || ||||| || Sbjct: 1206 cataatcatttgttgatctctgagctgtttcgcaacatcctttgcagaagatccagatac 1147 Query: 542 ttcaatccatgtttttgagaagagagcacatg 573 ||||||||| ||||| |||||||||||||||| Sbjct: 1146 ttcaatccaagttttggagaagagagcacatg 1115 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 411 ccaccaaatgcagcagcagtagggatgta 439 |||||||| ||||||||||| |||||||| Sbjct: 1277 ccaccaaaggcagcagcagtggggatgta 1249
>emb|CT033652.1| Platynereis dumerilii EST IB0AAA16CF07FM1 Length = 810 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 411 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 451 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 666 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 706 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 cgaaggtctcaaagtactggtatatgat 328 ||||| |||||||||||||||| ||||| Sbjct: 556 cgaagatctcaaagtactggtagatgat 583
>emb|CT033490.1| Platynereis dumerilii EST IB0AAA19BF11EM1 Length = 925 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 411 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 451 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 448 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 408 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgat 328 ||||| |||||||||||||||| ||||| Sbjct: 558 cgaagatctcaaagtactggtagatgat 531
>emb|CT033487.1| Platynereis dumerilii EST IB0AAA19BF12FM1 Length = 807 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 411 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 451 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 671 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 711 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 cgaaggtctcaaagtactggtatatgat 328 ||||| |||||||||||||||| ||||| Sbjct: 561 cgaagatctcaaagtactggtagatgat 588
>emb|CT033432.1| Platynereis dumerilii EST IB0AAA20BF03FM1 Length = 823 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 411 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 451 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 673 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 713 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 cgaaggtctcaaagtactggtatatgat 328 ||||| |||||||||||||||| ||||| Sbjct: 563 cgaagatctcaaagtactggtagatgat 590
>emb|CT033240.1| Platynereis dumerilii EST IB0AAA24BD10FM1 Length = 835 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 411 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 451 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 670 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 710 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 cgaaggtctcaaagtactggtatatgat 328 ||||| |||||||||||||||| ||||| Sbjct: 560 cgaagatctcaaagtactggtagatgat 587
>emb|CT033061.1| Platynereis dumerilii EST IB0AAA27BF01FM1 Length = 829 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 411 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 451 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 669 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 709 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 cgaaggtctcaaagtactggtatatgat 328 ||||| |||||||||||||||| ||||| Sbjct: 559 cgaagatctcaaagtactggtagatgat 586
>emb|CT032924.1| Platynereis dumerilii EST IB0AAA29CB07EM1 Length = 890 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 411 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 451 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 764 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 724 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgat 328 ||||| |||||||||||||||| ||||| Sbjct: 874 cgaagatctcaaagtactggtagatgat 847
>emb|CT032824.1| Platynereis dumerilii EST IB0AAA30DC12FM1 Length = 836 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 411 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 451 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 671 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 711 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 cgaaggtctcaaagtactggtatatgat 328 ||||| |||||||||||||||| ||||| Sbjct: 561 cgaagatctcaaagtactggtagatgat 588
>emb|CT032820.1| Platynereis dumerilii EST IB0AAA30DF04EM1 Length = 803 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 411 ccaccaaatgcagcagcagtagggatgtatctgttcagttc 451 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 565 ccaccaaaagcagcagcagtaggaatgtatctgttcagttc 525 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgat 328 ||||| |||||||||||||||| ||||| Sbjct: 675 cgaagatctcaaagtactggtagatgat 648
>gb|BC002951.1| Homo sapiens protein transport protein SEC61 alpha subunit isoform 1, mRNA (cDNA clone MGC:1086 IMAGE:3510682), complete cds Length = 3571 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 1290 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 1231 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1230 atccacgttttggagaaga 1212 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 1475 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1416 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 1415 caatggcgcctaggaagtcagccag 1391
>ref|XM_797003.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 8 (LOC576070), mRNA Length = 2918 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| ||||| |||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1293 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1234 Query: 546 atccatgtttttgagaaga 564 ||||| || || ||||||| Sbjct: 1233 atccaggtcttggagaaga 1215 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 396 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 447 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1383 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1332
>ref|XM_796992.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 7 (LOC576070), mRNA Length = 2924 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| ||||| |||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1299 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1240 Query: 546 atccatgtttttgagaaga 564 ||||| || || ||||||| Sbjct: 1239 atccaggtcttggagaaga 1221 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 396 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 447 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1389 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1338
>ref|XM_796979.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 6 (LOC576070), mRNA Length = 2912 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| ||||| |||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1287 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1228 Query: 546 atccatgtttttgagaaga 564 ||||| || || ||||||| Sbjct: 1227 atccaggtcttggagaaga 1209 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 396 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 447 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1377 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1326
>ref|XM_796967.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 5 (LOC576070), mRNA Length = 2726 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| ||||| |||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1101 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1042 Query: 546 atccatgtttttgagaaga 564 ||||| || || ||||||| Sbjct: 1041 atccaggtcttggagaaga 1023 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 396 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 447 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1191 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1140
>ref|XM_796949.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 4 (LOC576070), mRNA Length = 2921 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| ||||| |||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1296 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1237 Query: 546 atccatgtttttgagaaga 564 ||||| || || ||||||| Sbjct: 1236 atccaggtcttggagaaga 1218 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 396 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 447 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1386 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1335
>ref|XM_796930.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 3 (LOC576070), mRNA Length = 2845 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| ||||| |||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1220 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1161 Query: 546 atccatgtttttgagaaga 564 ||||| || || ||||||| Sbjct: 1160 atccaggtcttggagaaga 1142 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 396 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 447 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1310 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1259
>ref|XM_796907.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 2 (LOC576070), mRNA Length = 2374 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| ||||| |||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 749 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 690 Query: 546 atccatgtttttgagaaga 564 ||||| || || ||||||| Sbjct: 689 atccaggtcttggagaaga 671 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 396 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 447 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 839 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 788
>ref|XM_775245.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9539-PA, transcript variant 1 (LOC576070), mRNA Length = 2924 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| ||||| |||||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 1299 accatctgttgttccttcagttgtttagcaacatccttggcagatgatcctgagacttcg 1240 Query: 546 atccatgtttttgagaaga 564 ||||| || || ||||||| Sbjct: 1239 atccaggtcttggagaaga 1221 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 396 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttca 447 ||||||||||| | |||||||| || || ||||| |||||||| ||||||| Sbjct: 1389 gcaccgatgcacagaccaccaaaggctgctgcagttgggatgtacctgttca 1338
>emb|AL831940.1|HSM803192 Homo sapiens mRNA; cDNA DKFZp313F1012 (from clone DKFZp313F1012) Length = 3055 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 793 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 734 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 733 atccacgttttggagaaga 715 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 978 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 919 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 918 caatggcgcctaggaagtcagccag 894
>emb|AL832821.1|HSM804132 Homo sapiens mRNA; cDNA DKFZp667E1224 (from clone DKFZp667E1224) Length = 3600 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 1316 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 1257 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1256 atccacgttttggagaaga 1238 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 1501 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1442 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 1441 caatggcgcctaggaagtcagccag 1417
>emb|CR860842.1| Pongo pygmaeus mRNA; cDNA DKFZp469H0814 (from clone DKFZp469H0814) Length = 3582 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 1311 accatctgctgctccttcagctgctttgcaacatctttggcagaggaaccggagacctca 1252 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1251 atccacgttttggagaaga 1233 Score = 52.0 bits (26), Expect = 0.002 Identities = 70/85 (82%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| |||||||| || | | ||| || |||||||| || | Sbjct: 1496 cgaagatctcaaagtactggtagatgatggtgactgcgagcaggatcccggttccggacc 1437 Query: 361 caattgcgcccatgaaatcagccag 385 |||| || |||| ||| |||||||| Sbjct: 1436 caatggcacccaggaagtcagccag 1412
>emb|CR859335.1| Pongo pygmaeus mRNA; cDNA DKFZp469D1920 (from clone DKFZp469D1920) Length = 3576 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 1310 accatctgctgctccttcagctgctttgcaacatctttggcagaggaaccggagacctca 1251 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1250 atccacgttttggagaaga 1232 Score = 52.0 bits (26), Expect = 0.002 Identities = 70/85 (82%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| |||||||| || | | ||| || |||||||| || | Sbjct: 1495 cgaagatctcaaagtactggtagatgatggtgactgcgagcaggatcccggttccggacc 1436 Query: 361 caattgcgcccatgaaatcagccag 385 |||| || |||| ||| |||||||| Sbjct: 1435 caatggcacccaggaagtcagccag 1411
>emb|CR860233.1| Pongo pygmaeus mRNA; cDNA DKFZp469P1019 (from clone DKFZp469P1019) Length = 2792 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 531 accatctgctgctccttcagctgctttgcaacatctttggcagaggaaccggagacctca 472 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 471 atccacgttttggagaaga 453 Score = 52.0 bits (26), Expect = 0.002 Identities = 70/85 (82%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| |||||||| || | | ||| || |||||||| || | Sbjct: 716 cgaagatctcaaagtactggtagatgatggtgactgcgagcaggatcccggttccggacc 657 Query: 361 caattgcgcccatgaaatcagccag 385 |||| || |||| ||| |||||||| Sbjct: 656 caatggcacccaggaagtcagccag 632
>emb|CR623601.1| full-length cDNA clone CS0DI026YB08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1674 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 1282 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 1223 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1222 atccacgttttggagaaga 1204 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 1467 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1408 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 1407 caatggcgcctaggaagtcagccag 1383
>dbj|AK074928.1| Homo sapiens cDNA FLJ90447 fis, clone NT2RP3001240, highly similar to Canis familiaris sec61 homologue mRNA Length = 3238 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 991 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 932 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 931 atccacgttttggagaaga 913 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 1176 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1117 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 1116 caatggcgcctaggaagtcagccag 1092
>dbj|AK074907.1| Homo sapiens cDNA FLJ90426 fis, clone NT2RP3000460, highly similar to Protein transport protein Sec61 alpha subunitisoform 1 Length = 2600 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 353 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 294 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 293 atccacgttttggagaaga 275 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 538 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 479 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 478 caatggcgcctaggaagtcagccag 454
>dbj|AK074706.1| Homo sapiens cDNA FLJ90225 fis, clone NT2RM1000855, highly similar to Protein transport protein Sec61 alpha subunitisoform 1 Length = 3635 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 1383 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 1324 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1323 atccacgttttggagaaga 1305 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 1568 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1509 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 1508 caatggcgcctaggaagtcagccag 1484
>dbj|AK075148.1| Homo sapiens cDNA FLJ90667 fis, clone PLACE1005410, highly similar to Protein transport protein Sec61 alpha subunitisoform 1 Length = 2633 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 383 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 324 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 323 atccacgttttggagaaga 305 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 568 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 509 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 508 caatggcgcctaggaagtcagccag 484
>dbj|AK027458.1| Homo sapiens cDNA FLJ14552 fis, clone NT2RM2001760, highly similar to Homo sapiens sec61 homolog mRNA Length = 2379 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 128 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 69 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 68 atccacgttttggagaaga 50 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 313 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 254 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 253 caatggcgcctaggaagtcagccag 229
>dbj|AK027454.1| Homo sapiens cDNA FLJ14548 fis, clone NT2RM2001648, highly similar to Homo sapiens sec61 homolog mRNA Length = 2421 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 169 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 110 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 109 atccacgttttggagaaga 91 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 354 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 295 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 294 caatggcgcctaggaagtcagccag 270
>dbj|AK027452.1| Homo sapiens cDNA FLJ14546 fis, clone NT2RM2001613, highly similar to Homo sapiens sec61 homolog mRNA Length = 2601 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 349 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 290 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 289 atccacgttttggagaaga 271 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 534 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 475 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 474 caatggcgcctaggaagtcagccag 450
>dbj|AK027423.1| Homo sapiens cDNA FLJ14517 fis, clone NT2RM1000833, highly similar to Homo sapiens sec61 homolog mRNA Length = 3635 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 1383 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 1324 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1323 atccacgttttggagaaga 1305 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 1568 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1509 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 1508 caatggcgcctaggaagtcagccag 1484
>dbj|AK001689.1| Homo sapiens cDNA FLJ10827 fis, clone NT2RP4001117, highly similar to PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT Length = 2690 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 443 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 384 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 383 atccacgttttggagaaga 365 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 628 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 569 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 568 caatggcgcctaggaagtcagccag 544
>dbj|AB062670.1| Drosophila melanogaster mRNA for DSec61alpha, complete cds Length = 1984 Score = 63.9 bits (32), Expect = 6e-07 Identities = 55/63 (87%) Strand = Plus / Minus Query: 467 ctcgcgatggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggc 526 |||||||||||| |||| ||||| || || |||||||||||||| || ||||||||||| Sbjct: 1306 ctcgcgatggccacgcatcaccatgtgctgctccttcagctgcttggcaacatccttggc 1247 Query: 527 tga 529 ||| Sbjct: 1246 tga 1244
>ref|NM_135190.3| Drosophila melanogaster Sec61 CG9539-RA (Sec61alpha), mRNA Length = 2046 Score = 63.9 bits (32), Expect = 6e-07 Identities = 55/63 (87%) Strand = Plus / Minus Query: 467 ctcgcgatggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggc 526 |||||||||||| |||| ||||| || || |||||||||||||| || ||||||||||| Sbjct: 1377 ctcgcgatggccacgcatcaccatgtgctgctccttcagctgcttggcaacatccttggc 1318 Query: 527 tga 529 ||| Sbjct: 1317 tga 1315
>gb|AY069569.1| Drosophila melanogaster LD29847 full length cDNA Length = 1652 Score = 63.9 bits (32), Expect = 6e-07 Identities = 55/63 (87%) Strand = Plus / Minus Query: 467 ctcgcgatggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggc 526 |||||||||||| |||| ||||| || || |||||||||||||| || ||||||||||| Sbjct: 1323 ctcgcgatggccacgcatcaccatgtgctgctccttcagctgcttggcaacatccttggc 1264 Query: 527 tga 529 ||| Sbjct: 1263 tga 1261
>gb|AF346602.1|AF346602 Homo sapiens Sec61 alpha form 1 mRNA, complete cds Length = 1680 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 1265 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 1206 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1205 atccacgttttggagaaga 1187 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 1450 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1391 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 1390 caatggcgcctaggaagtcagccag 1366
>ref|NM_013336.3| Homo sapiens Sec61 alpha 1 subunit (S. cerevisiae) (SEC61A1), mRNA Length = 3656 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 1383 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 1324 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1323 atccacgttttggagaaga 1305 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 1568 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1509 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 1508 caatggcgcctaggaagtcagccag 1484
>gb|AF077032.1| Homo sapiens sec61 homolog mRNA, complete cds Length = 3561 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 1289 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 1230 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1229 atccacgttttggagaaga 1211 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 1474 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1415 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 1414 caatggcgcctaggaagtcagccag 1390
>gb|AF084458.1|HSEC61 Homo sapiens sec61 homolog mRNA, complete cds Length = 3561 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| ||||| ||| Sbjct: 1289 accatctgctgctccttcagctgctttgcaacatctttggcagaggaacctgagacctca 1230 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1229 atccacgttttggagaaga 1211 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 1474 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 1415 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 1414 caatggcgcctaggaagtcagccag 1390
>gb|AY610173.1| Sus scrofa clone Clu_85032.scr.msk.p1.Contig1, mRNA sequence Length = 1950 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||||||||| || || || ||||| ||| Sbjct: 1284 accatctgctgctccttcagctgctttgcaacatccttggcagaggagcctgagacctca 1225 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1224 atccaggttttggagaaga 1206 Score = 52.0 bits (26), Expect = 0.002 Identities = 106/133 (79%) Strand = Plus / Minus Query: 307 tctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattg 366 |||||||||||||||| ||||||||||| | | ||| || || ||||| || || || | Sbjct: 1463 tctcaaagtactggtagatgatggtaaccgcgagcaggatcccagttccagacccgatgg 1404 Query: 367 cgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcag 426 |||||| ||| |||||||| || | | || |||||||| | |||||||| || |||| Sbjct: 1403 cgcccaggaagtcagccaggacggagagggccccgatgcacagcccaccaaaggccgcag 1344 Query: 427 cagtagggatgta 439 |||| |||||||| Sbjct: 1343 cagtggggatgta 1331
>dbj|AB032902.1| Mus musculus Sec61 mRNA, complete cds Length = 1804 Score = 63.9 bits (32), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || || || |||||||| Sbjct: 1319 accatctgctgctccttcagctgctttgcaacatctttggcagaagagcctgagacttcg 1260 Query: 546 atccatgtttttgagaaga 564 ||||||||||| ||||||| Sbjct: 1259 atccatgttttggagaaga 1241 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggt 331 ||||| |||||||||||||||| |||||||| Sbjct: 1504 cgaagatctcaaagtactggtagatgatggt 1474
>ref|NM_001040504.1| Bos taurus Sec61 alpha form 1 (SEC61A1), mRNA Length = 1634 Score = 61.9 bits (31), Expect = 2e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 293 ctccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggt 352 ||||||| ||||| |||||||||||||||| |||||||| || | || ||| || ||||| Sbjct: 1414 ctccttcacgaagatctcaaagtactggtagatgatggtgaccgccagcaggatcccggt 1355 Query: 353 tcctgaaccaattgcgcccatgaaatcagc 382 ||| || || || ||||||| ||| ||||| Sbjct: 1354 tccagacccgatggcgcccaagaagtcagc 1325 Score = 42.1 bits (21), Expect = 2.1 Identities = 68/84 (80%) Strand = Plus / Minus Query: 481 gcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagaga 540 |||| ||||| || || |||||||||||||| || || |||||||| || || || |||| Sbjct: 1226 gcatcaccatctgctgctccttcagctgctttgcaacgtccttggcggaggagcccgaga 1167 Query: 541 cttcaatccatgtttttgagaaga 564 | || ||||| || || ||||||| Sbjct: 1166 cctcgatccacgtcttggagaaga 1143
>gb|BT020701.1| Bos taurus Sec61 alpha 1 subunit (S. cerevisiae) (SEC61A1), mRNA, complete cds Length = 1634 Score = 61.9 bits (31), Expect = 2e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 293 ctccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggt 352 ||||||| ||||| |||||||||||||||| |||||||| || | || ||| || ||||| Sbjct: 1414 ctccttcacgaagatctcaaagtactggtagatgatggtgaccgccagcaggatcccggt 1355 Query: 353 tcctgaaccaattgcgcccatgaaatcagc 382 ||| || || || ||||||| ||| ||||| Sbjct: 1354 tccagacccgatggcgcccaagaagtcagc 1325 Score = 42.1 bits (21), Expect = 2.1 Identities = 68/84 (80%) Strand = Plus / Minus Query: 481 gcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagaga 540 |||| ||||| || || |||||||||||||| || || |||||||| || || || |||| Sbjct: 1226 gcatcaccatctgctgctccttcagctgctttgcaacgtccttggcggaggagcccgaga 1167 Query: 541 cttcaatccatgtttttgagaaga 564 | || ||||| || || ||||||| Sbjct: 1166 cctcgatccacgtcttggagaaga 1143
>dbj|D25536.1|HROSEC61P Halocynthia roretzi mRNA for HRSec61, complete cds Length = 2057 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 341 cagaataccggttcctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcacc 400 |||||| |||||||| |||||||| || || ||||||||||| || || | ||| || || Sbjct: 1391 cagaattccggttccggaaccaatggctcctatgaaatcagcgagtacggacaacgcgcc 1332 Query: 401 gatgcatactccaccaaatgcagcagcagtagggatgta 439 ||| |||| || || || |||||||||||||||||||| Sbjct: 1331 gatacataaacctccgaacgcagcagcagtagggatgta 1293
>ref|XM_424024.1| PREDICTED: Gallus gallus similar to Sec61 alpha isoform 2 (LOC426369), partial mRNA Length = 2070 Score = 60.0 bits (30), Expect = 9e-06 Identities = 65/77 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 |||||||| || || || || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 1392 accatttgctgttctttgagttgcttggcaacatcttttgctgatgaaccagacacttca 1333 Query: 546 atccatgtttttgagaa 562 ||||| || |||||||| Sbjct: 1332 atccaagtctttgagaa 1316
>gb|AY103473.1| Hemitripterus americanus Sec61-alpha mRNA, complete cds Length = 1536 Score = 60.0 bits (30), Expect = 9e-06 Identities = 122/153 (79%) Strand = Plus / Minus Query: 293 ctccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggt 352 ||||||| ||||| | |||||||||||||| ||||| || |||| ||| || || || || Sbjct: 1451 ctccttcacgaagatttcaaagtactggtagatgattgtcacagccaagaggattcctgt 1392 Query: 353 tcctgaaccaattgcgcccatgaaatcagccagaacagtcaatgcaccgatgcatactcc 412 ||||||||||| || |||| ||| ||||||| |||| || | || ||||| | || Sbjct: 1391 acctgaaccaatggcacccaggaagtcagccatgacagacagccctcctatgcagaggcc 1332 Query: 413 accaaatgcagcagcagtagggatgtatctgtt 445 |||||| |||||||| || |||||||| ||||| Sbjct: 1331 accaaaggcagcagctgtggggatgtacctgtt 1299 Score = 48.1 bits (24), Expect = 0.035 Identities = 65/79 (82%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || || || ||||| ||| Sbjct: 1258 accatctgctgctccttcagctgcttcgccacatctttggccgaggatcctgagacctca 1199 Query: 546 atccatgtttttgagaaga 564 ||||| || || ||||||| Sbjct: 1198 atccaggtcttggagaaga 1180
>gb|DQ416034.1| Acyrthosiphon pisum putative transport protein Sec61 alpha subunit mRNA, complete cds Length = 1431 Score = 60.0 bits (30), Expect = 9e-06 Identities = 77/93 (82%) Strand = Plus / Minus Query: 481 gcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagaga 540 |||||||||||||||| || || | || ||||| ||||| || || ||||| ||||||| Sbjct: 1204 gcataaccatttgttgttcttttaattgtttagcaacatctttagcagatgatccagaga 1145 Query: 541 cttcaatccatgtttttgagaagagagcacatg 573 |||||||||| ||||| || |||| ||||||| Sbjct: 1144 cttcaatccaagttttggaaaagaatgcacatg 1112 Score = 52.0 bits (26), Expect = 0.002 Identities = 100/125 (80%) Strand = Plus / Minus Query: 309 tcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcg 368 ||||| ||||||||||| || ||||||| ||||| ||||| || || || ||||| || Sbjct: 1376 tcaaaatactggtatataatagtaacagctaacaggatacccgtgcccgatccaatggca 1317 Query: 369 cccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagca 428 |||||||| ||||||| |||| |||||||| || || | || ||||| || |||||| Sbjct: 1316 cccatgaagtcagccaacacagataatgcaccaatacaaagccctccaaacgctgcagca 1257 Query: 429 gtagg 433 ||||| Sbjct: 1256 gtagg 1252
>gb|AC073160.8| Homo sapiens chromosome 10 clone RP11-348G8, complete sequence Length = 189817 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 516 acatccttggctgatgaaccagagacttcaatccatgtttttgagaagagagcacatg 573 ||||| |||||||| |||||||| |||||||||||||| || ||||||| ||||||| Sbjct: 158005 acatctttggctgaggaaccagacacttcaatccatgtcttagagaagaatgcacatg 157948
>emb|CR391547.1| Gallus gallus finished cDNA, clone ChEST799f10 Length = 937 Score = 60.0 bits (30), Expect = 9e-06 Identities = 65/77 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 |||||||| || || || || ||||| || ||||| || |||||||||||||| |||||| Sbjct: 514 accatttgctgttctttgagttgcttggcaacatcttttgctgatgaaccagacacttca 455 Query: 546 atccatgtttttgagaa 562 ||||| || |||||||| Sbjct: 454 atccaagtctttgagaa 438
>ref|XM_628281.1| Cryptosporidium parvum Iowa II putative Sec61 (cgd7_950), partial mRNA Length = 1422 Score = 58.0 bits (29), Expect = 4e-05 Identities = 76/92 (82%) Strand = Plus / Minus Query: 482 cataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagac 541 ||||| ||||||||| || | || ||||| || |||||||| || || || ||||| || Sbjct: 1206 cataatcatttgttgatctctgagttgcttcgcaacatcctttgcagaagatccagatac 1147 Query: 542 ttcaatccatgtttttgagaagagagcacatg 573 ||| ||||| ||||| |||||||||||||||| Sbjct: 1146 ttcgatccaggttttggagaagagagcacatg 1115 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 411 ccaccaaatgcagcagcagtagggatgta 439 |||||||| ||||||||||| |||||||| Sbjct: 1277 ccaccaaaggcagcagcagtggggatgta 1249
>ref|NM_001003315.1| Canis familiaris Sec61 alpha 1 subunit (S. cerevisiae) (SEC61A1), mRNA Length = 3391 Score = 56.0 bits (28), Expect = 1e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || || || ||||| ||| Sbjct: 1301 accatctgctgttccttcagctgctttgcaacatctttggcagaggagcccgagacctca 1242 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1241 atccaggttttggagaaga 1223 Score = 44.1 bits (22), Expect = 0.54 Identities = 63/77 (81%) Strand = Plus / Minus Query: 309 tcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcg 368 |||||||||||||| ||||| || || | || ||| || |||||||| || ||||| ||| Sbjct: 1478 tcaaagtactggtagatgattgtgactgccagcaggatcccggttccagacccaatggcg 1419 Query: 369 cccatgaaatcagccag 385 |||| ||| || ||||| Sbjct: 1418 cccaggaagtcggccag 1402
>gb|BC094530.1| Rattus norvegicus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone MGC:105264 IMAGE:7320508), complete cds Length = 3061 Score = 56.0 bits (28), Expect = 1e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 1306 accatctgctgctccttcagctgcttggcaacatctttggcagaagaacccgaaacttcg 1247 Query: 546 atccatgtttt 556 ||||||||||| Sbjct: 1246 atccatgtttt 1236 Score = 54.0 bits (27), Expect = 6e-04 Identities = 74/90 (82%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| |||||||| || | || ||| || ||||| || || | Sbjct: 1491 cgaagatctcaaagtactggtagatgatggtgaccgccagcaggatcccggtgccagacc 1432 Query: 361 caattgcgcccatgaaatcagccagaacag 390 | || || |||| |||||||||||| |||| Sbjct: 1431 cgatagcacccaggaaatcagccaggacag 1402
>ref|NM_199256.2| Rattus norvegicus Sec61 alpha 1 subunit (S. cerevisiae) (Sec61a1), mRNA Length = 3061 Score = 56.0 bits (28), Expect = 1e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 1306 accatctgctgctccttcagctgcttggcaacatctttggcagaagaacccgaaacttcg 1247 Query: 546 atccatgtttt 556 ||||||||||| Sbjct: 1246 atccatgtttt 1236 Score = 54.0 bits (27), Expect = 6e-04 Identities = 74/90 (82%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| |||||||| || | || ||| || ||||| || || | Sbjct: 1491 cgaagatctcaaagtactggtagatgatggtgaccgccagcaggatcccggtgccagacc 1432 Query: 361 caattgcgcccatgaaatcagccagaacag 390 | || || |||| |||||||||||| |||| Sbjct: 1431 cgatagcacccaggaaatcagccaggacag 1402
>ref|XM_965057.1| PREDICTED: Tribolium castaneum similar to CG9539-PA (LOC658693), mRNA Length = 1943 Score = 56.0 bits (28), Expect = 1e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 312 aagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcgccc 371 ||||||||||| || || || |||| || || ||||||||| ||||||||||| || ||| Sbjct: 1521 aagtactggtaaataatagtgacagccagcaaaataccggtgcctgaaccaatcgcaccc 1462 Query: 372 atgaaatcagccagaacag 390 | |||||| |||| ||||| Sbjct: 1461 aagaaatcggccaaaacag 1443
>gb|BC044351.1| Danio rerio SEC61, alpha subunit, mRNA (cDNA clone MGC:55256 IMAGE:3815921), complete cds Length = 2605 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||||||||| ||||| ||||| || || ||||| ||||||||||| || ||||| Sbjct: 1291 ttcagctgcttagctacatctttggcagaagatccagaaacttcaatccaggtctttgaa 1232 Query: 561 aaga 564 |||| Sbjct: 1231 aaga 1228 Score = 52.0 bits (26), Expect = 0.002 Identities = 115/145 (79%) Strand = Plus / Minus Query: 307 tctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattg 366 ||||||||||||| || ||||||||||||| ||| || || || ||||| || || || | Sbjct: 1485 tctcaaagtactgatagatgatggtaacagccaataggattcccgttccggagccgatgg 1426 Query: 367 cgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcag 426 |||||| ||| || |||| || | | | ||||| || | ||||||||||||||| | Sbjct: 1425 cgcccaggaagtccgccattactgaaaggcctccgatacacagtccaccaaatgcagccg 1366 Query: 427 cagtagggatgtatctgttcagttc 451 | || |||||||||||||| ||||| Sbjct: 1365 ctgtggggatgtatctgttgagttc 1341
>gb|BC066715.1| Danio rerio SEC61, alpha subunit, mRNA (cDNA clone MGC:76848 IMAGE:6960771), complete cds Length = 2580 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||||||||| ||||| ||||| || || ||||| ||||||||||| || ||||| Sbjct: 1249 ttcagctgcttagctacatctttggcagaagatccagaaacttcaatccaggtctttgaa 1190 Query: 561 aaga 564 |||| Sbjct: 1189 aaga 1186 Score = 52.0 bits (26), Expect = 0.002 Identities = 115/145 (79%) Strand = Plus / Minus Query: 307 tctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattg 366 ||||||||||||| || ||||||||||||| ||| || || || ||||| || || || | Sbjct: 1443 tctcaaagtactgatagatgatggtaacagccaataggattcccgttccggagccgatgg 1384 Query: 367 cgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcag 426 |||||| ||| || |||| || | | | ||||| || | ||||||||||||||| | Sbjct: 1383 cgcccaggaagtccgccattactgaaaggcctccgatacacagtccaccaaatgcagccg 1324 Query: 427 cagtagggatgtatctgttcagttc 451 | || |||||||||||||| ||||| Sbjct: 1323 ctgtggggatgtatctgttgagttc 1299
>gb|M96630.1|RATSEC61B Rattus sp. sec61-like protein mRNA, complete cds Length = 1738 Score = 56.0 bits (28), Expect = 1e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct: 1297 accatctgctgctccttcagctgcttggcaacatctttggcagaagaacccgaaacttcg 1238 Query: 546 atccatgtttt 556 ||||||||||| Sbjct: 1237 atccatgtttt 1227 Score = 54.0 bits (27), Expect = 6e-04 Identities = 74/90 (82%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| |||||||| || | || ||| || ||||| || || | Sbjct: 1482 cgaagatctcaaagtactggtagatgatggtgaccgccagcaggatcccggtgccagacc 1423 Query: 361 caattgcgcccatgaaatcagccagaacag 390 | || || |||| |||||||||||| |||| Sbjct: 1422 cgatagcacccaggaaatcagccaggacag 1393
>gb|AY064125.1| Aedes aegypti clone bR19Mc3 probable transport protein Sec61 alpha subunit (Sec61) mRNA, complete cds Length = 1962 Score = 56.0 bits (28), Expect = 1e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||| ||||||||||| |||||||| || | || || ||||||||||| |||| Sbjct: 1525 cgaagatctcgaagtactggtagatgatggtgactgccagcaagataccggttccggaac 1466 Query: 361 caattgcgcccatgaaatc 379 | || || ||||||||||| Sbjct: 1465 cgatcgcacccatgaaatc 1447
>gb|AY064124.1| Aedes aegypti clone bR19Rc1 probable transport protein Sec61 alpha subunit (Sec61) mRNA, complete cds Length = 1962 Score = 56.0 bits (28), Expect = 1e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||| ||||||||||| |||||||| || | || || ||||||||||| |||| Sbjct: 1525 cgaagatctcgaagtactggtagatgatggtgactgccagcaagataccggttccggaac 1466 Query: 361 caattgcgcccatgaaatc 379 | || || ||||||||||| Sbjct: 1465 cgatcgcacccatgaaatc 1447
>gb|AF392805.1|AF392805 Aedes aegypti strain RED probable transport protein Sec61 alpha subunit (Sec61) mRNA, complete cds Length = 2018 Score = 56.0 bits (28), Expect = 1e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||| ||||||||||| |||||||| || | || || ||||||||||| |||| Sbjct: 1555 cgaagatctcgaagtactggtagatgatggtgactgccagcaagataccggttccggaac 1496 Query: 361 caattgcgcccatgaaatc 379 | || || ||||||||||| Sbjct: 1495 cgatcgcacccatgaaatc 1477
>gb|AY029527.1| Danio rerio Sec61 alpha form A mRNA, complete cds Length = 2602 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||||||||| ||||| ||||| || || ||||| ||||||||||| || ||||| Sbjct: 1309 ttcagctgcttagctacatctttggcagaagatccagaaacttcaatccaggtctttgaa 1250 Query: 561 aaga 564 |||| Sbjct: 1249 aaga 1246 Score = 52.0 bits (26), Expect = 0.002 Identities = 115/145 (79%) Strand = Plus / Minus Query: 307 tctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattg 366 ||||||||||||| || ||||||||||||| ||| || || || ||||| || || || | Sbjct: 1503 tctcaaagtactgatagatgatggtaacagccaataggattcccgttccggagccgatgg 1444 Query: 367 cgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcag 426 |||||| ||| || |||| || | | | ||||| || | ||||||||||||||| | Sbjct: 1443 cgcccaggaagtccgccattactgaaaggcctccgatacacagtccaccaaatgcagccg 1384 Query: 427 cagtagggatgtatctgttcagttc 451 | || |||||||||||||| ||||| Sbjct: 1383 ctgtggggatgtatctgttgagttc 1359
>gb|AF346601.1|AF346601 Oncorhynchus mykiss Sec61 alpha form B mRNA, complete cds Length = 1528 Score = 56.0 bits (28), Expect = 1e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 482 cataaccatttgttgntccttcagctgcttagcgacatccttggctgatga 532 ||||||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1222 cataaccatctgttgctcctttagctgcttagccacatctttggcagatga 1172 Score = 42.1 bits (21), Expect = 2.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 309 tcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaat 364 |||||||||||||| |||||||| || | || ||| ||||| ||||| || ||||| Sbjct: 1395 tcaaagtactggtagatgatggtgacggccagcaggatacccgttcccgagccaat 1340
>gb|AF326338.1|AF326338 Aedes aegypti strain MOYO-R putative transport protein Sec61 alpha subunit (Sec61) mRNA, complete cds Length = 2021 Score = 56.0 bits (28), Expect = 1e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||| ||||||||||| |||||||| || | || || ||||||||||| |||| Sbjct: 1556 cgaagatctcgaagtactggtagatgatggtgactgccagcaagataccggttccggaac 1497 Query: 361 caattgcgcccatgaaatc 379 | || || ||||||||||| Sbjct: 1496 cgatcgcacccatgaaatc 1478
>ref|NM_153659.1| Danio rerio SEC61, alpha subunit (sec61a), mRNA Length = 2602 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 501 ttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgtttttgag 560 |||||||||||||| ||||| ||||| || || ||||| ||||||||||| || ||||| Sbjct: 1309 ttcagctgcttagctacatctttggcagaagatccagaaacttcaatccaggtctttgaa 1250 Query: 561 aaga 564 |||| Sbjct: 1249 aaga 1246 Score = 52.0 bits (26), Expect = 0.002 Identities = 115/145 (79%) Strand = Plus / Minus Query: 307 tctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattg 366 ||||||||||||| || ||||||||||||| ||| || || || ||||| || || || | Sbjct: 1503 tctcaaagtactgatagatgatggtaacagccaataggattcccgttccggagccgatgg 1444 Query: 367 cgcccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcag 426 |||||| ||| || |||| || | | | ||||| || | ||||||||||||||| | Sbjct: 1443 cgcccaggaagtccgccattactgaaaggcctccgatacacagtccaccaaatgcagccg 1384 Query: 427 cagtagggatgtatctgttcagttc 451 | || |||||||||||||| ||||| Sbjct: 1383 ctgtggggatgtatctgttgagttc 1359
>gb|M96629.1|DOGSEC61A Canis familiaris sec61 homologue mRNA, complete cds Length = 3391 Score = 56.0 bits (28), Expect = 1e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || || || ||||| ||| Sbjct: 1301 accatctgctgttccttcagctgctttgcaacatctttggcagaggagcccgagacctca 1242 Query: 546 atccatgtttttgagaaga 564 ||||| ||||| ||||||| Sbjct: 1241 atccaggttttggagaaga 1223 Score = 44.1 bits (22), Expect = 0.54 Identities = 63/77 (81%) Strand = Plus / Minus Query: 309 tcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcg 368 |||||||||||||| ||||| || || | || ||| || |||||||| || ||||| ||| Sbjct: 1478 tcaaagtactggtagatgattgtgactgccagcaggatcccggttccagacccaatggcg 1419 Query: 369 cccatgaaatcagccag 385 |||| ||| || ||||| Sbjct: 1418 cccaggaagtcggccag 1402
>gb|AY737549.1| Toxoptera citricida probable transport protein Sec61 alpha subunit mRNA, complete cds Length = 1431 Score = 52.0 bits (26), Expect = 0.002 Identities = 100/125 (80%) Strand = Plus / Minus Query: 309 tcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcg 368 ||||| ||||||||||| || ||||||| ||||| ||||| || || || ||||| || Sbjct: 1376 tcaaaatactggtatataatagtaacagctaacaggataccagtgcccgatccaatggca 1317 Query: 369 cccatgaaatcagccagaacagtcaatgcaccgatgcatactccaccaaatgcagcagca 428 |||||||| || |||| |||| | |||||| || |||| || |||||||| |||||| Sbjct: 1316 cccatgaagtctgccaatacagatagtgcaccaatacatagccctccaaatgctgcagca 1257 Query: 429 gtagg 433 ||||| Sbjct: 1256 gtagg 1252 Score = 52.0 bits (26), Expect = 0.002 Identities = 76/93 (81%) Strand = Plus / Minus Query: 481 gcataaccatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagaga 540 |||||||||||||||| || || | || || || ||||| || || ||||| ||||||| Sbjct: 1204 gcataaccatttgttgttcttttaattgttttgcaacatctttagcagatgatccagaga 1145 Query: 541 cttcaatccatgtttttgagaagagagcacatg 573 |||||||||| ||||| || |||| ||||||| Sbjct: 1144 cttcaatccaagttttggaaaagaatgcacatg 1112
>gb|AY113841.1| Dissostichus mawsoni Sec61 (SEC61) mRNA, complete cds Length = 1441 Score = 50.1 bits (25), Expect = 0.009 Identities = 63/76 (82%) Strand = Plus / Minus Query: 309 tcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcg 368 |||||||||||||| |||||||| |||| ||| || || || || || |||||||| || Sbjct: 1376 tcaaagtactggtagatgatggtcacagccaagaggattcctgtccccgaaccaatggcc 1317 Query: 369 cccatgaaatcagcca 384 |||| ||| ||||||| Sbjct: 1316 cccaggaagtcagcca 1301 Score = 40.1 bits (20), Expect = 8.4 Identities = 64/79 (81%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| || || || || || ||||| || Sbjct: 1199 accatctgctgctccttcagctgcttcgccacatctttagcagaagatcctgagacctcg 1140 Query: 546 atccatgtttttgagaaga 564 ||||| || |||||||||| Sbjct: 1139 atccaggtctttgagaaga 1121
>gb|AY103475.1| Gadus ogac Sec61-alpha mRNA, complete cds Length = 2483 Score = 50.1 bits (25), Expect = 0.009 Identities = 60/72 (83%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| |||||||| || | || ||| || ||||| ||||| | Sbjct: 1490 cgaagatctcaaagtactggtagatgatggtgacggccagcaggatgccggtgcctgagc 1431 Query: 361 caattgcgccca 372 | || ||||||| Sbjct: 1430 cgatggcgccca 1419
>gb|AY103472.1| Notothenia angustata Sec61-alpha mRNA, complete cds Length = 1549 Score = 50.1 bits (25), Expect = 0.009 Identities = 63/76 (82%) Strand = Plus / Minus Query: 309 tcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcg 368 |||||||||||||| |||||||| |||| ||| || || || || || |||||||| || Sbjct: 1449 tcaaagtactggtagatgatggtcacagccaagaggattcctgtccccgaaccaatagcc 1390 Query: 369 cccatgaaatcagcca 384 |||| ||| ||||||| Sbjct: 1389 cccaggaagtcagcca 1374 Score = 40.1 bits (20), Expect = 8.4 Identities = 64/79 (81%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| || || || || || ||||| || Sbjct: 1272 accatctgctgctccttcagctgcttcgccacatctttagcagaagatcctgagacctcg 1213 Query: 546 atccatgtttttgagaaga 564 ||||| || |||||||||| Sbjct: 1212 atccaggtctttgagaaga 1194
>gb|AY103471.1| Pagothenia borchgrevinki Sec61-alpha mRNA, complete cds Length = 1550 Score = 50.1 bits (25), Expect = 0.009 Identities = 63/76 (82%) Strand = Plus / Minus Query: 309 tcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcg 368 |||||||||||||| |||||||| |||| ||| || || || || || |||||||| || Sbjct: 1449 tcaaagtactggtagatgatggtcacagccaagaggattcctgtccccgaaccaatggcc 1390 Query: 369 cccatgaaatcagcca 384 |||| ||| ||||||| Sbjct: 1389 cccaggaagtcagcca 1374 Score = 40.1 bits (20), Expect = 8.4 Identities = 64/79 (81%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| || || || || || ||||| || Sbjct: 1272 accatctgctgctccttcagctgcttcgccacatctttagcagaagatcctgagacctcg 1213 Query: 546 atccatgtttttgagaaga 564 ||||| || |||||||||| Sbjct: 1212 atccaggtctttgagaaga 1194
>dbj|AK054318.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330014L21 product:SEC61, alpha subunit (S. cerevisiae), full insert sequence Length = 2525 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 516 acatccttggctgatgaaccagagacttcaatccatgtttttgagaaga 564 ||||| ||||| || ||||| |||||||| ||||||||||| ||||||| Sbjct: 2113 acatctttggcagaagaacctgagacttcgatccatgttttggagaaga 2065
>gb|AC154038.1| Mus musculus 6 BAC RP23-49L8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213878 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 516 acatccttggctgatgaaccagagacttcaatccatgtttttgagaaga 564 ||||| ||||| || ||||| |||||||| ||||||||||| ||||||| Sbjct: 80736 acatctttggcagaagaacctgagacttcgatccatgttttggagaaga 80784 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 301 cgaaggtctcaaagtactggtatatgatggt 331 ||||| |||||||||||||||| |||||||| Sbjct: 79151 cgaagatctcaaagtactggtagatgatggt 79181
>ref|XM_816127.1| Trypanosoma cruzi strain CL Brener pretranslocation protein, alpha subunit (Tc00.1047053510101.70) partial mRNA Length = 1446 Score = 48.1 bits (24), Expect = 0.035 Identities = 38/43 (88%) Strand = Plus / Minus Query: 307 tctcaaagtactggtatatgatggtaacagncaacagaatacc 349 ||||||||||||||| || ||||| |||| |||||||||||| Sbjct: 1387 tctcaaagtactggttgatcatggtcacagccaacagaatacc 1345
>ref|XM_815115.1| Trypanosoma cruzi strain CL Brener pretranslocation protein, alpha subunit (Tc00.1047053506297.240) partial mRNA Length = 1446 Score = 48.1 bits (24), Expect = 0.035 Identities = 38/43 (88%) Strand = Plus / Minus Query: 307 tctcaaagtactggtatatgatggtaacagncaacagaatacc 349 ||||||||||||||| || ||||| |||| |||||||||||| Sbjct: 1387 tctcaaagtactggttgatcatggtcacagccaacagaatacc 1345
>gb|AY103476.1| Bovichtus variegatus Sec61-alpha mRNA, complete cds Length = 1551 Score = 48.1 bits (24), Expect = 0.035 Identities = 65/79 (82%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || |||||||||||||| || ||||| ||||| || || || ||||| ||| Sbjct: 1273 accatctgctgctccttcagctgctttgccacatctttggcagaggatcctgagacctca 1214 Query: 546 atccatgtttttgagaaga 564 ||||| || || ||||||| Sbjct: 1213 atccaggtcttggagaaga 1195 Score = 42.1 bits (21), Expect = 2.1 Identities = 62/76 (81%) Strand = Plus / Minus Query: 309 tcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaaccaattgcg 368 |||||||||||||| ||||| || |||| ||| || || || || || |||||||| || Sbjct: 1450 tcaaagtactggtagatgattgtcacagccaaaaggattcctgtacccgaaccaatggca 1391 Query: 369 cccatgaaatcagcca 384 |||| ||| ||||||| Sbjct: 1390 cccaggaagtcagcca 1375
>gb|AF346600.1|AF346600 Oncorhynchus mykiss Sec61 alpha form A mRNA, complete cds Length = 1643 Score = 48.1 bits (24), Expect = 0.035 Identities = 65/79 (82%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || ||||||||||||||||| ||||| ||||| || || || || || || Sbjct: 1244 accatctgctgttccttcagctgcttagccacatctttggcagaggatcccgaaacctcg 1185 Query: 546 atccatgtttttgagaaga 564 |||||||| || ||||||| Sbjct: 1184 atccatgtcttggagaaga 1166 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggt 331 ||||| |||||||||||||||| |||||||| Sbjct: 1429 cgaagatctcaaagtactggtagatgatggt 1399
>gb|AY967531.1| Schmidtea mediterranea clone HE.3.12B mRNA sequence Length = 948 Score = 48.1 bits (24), Expect = 0.035 Identities = 38/43 (88%) Strand = Plus / Plus Query: 481 gcataaccatttgttgntccttcagctgcttagcgacatcctt 523 |||| ||||||||||| || |||| |||||| ||||||||||| Sbjct: 427 gcatcaccatttgttgttctttcaactgcttcgcgacatcctt 469
>gb|AY066163.1| Schmidtea mediterranea clone H.22.10b unknown mRNA sequence Length = 988 Score = 48.1 bits (24), Expect = 0.035 Identities = 38/43 (88%) Strand = Plus / Plus Query: 481 gcataaccatttgttgntccttcagctgcttagcgacatcctt 523 |||| ||||||||||| || |||| |||||| ||||||||||| Sbjct: 426 gcatcaccatttgttgttctttcaactgcttcgcgacatcctt 468
>emb|AJ270222.1|ECA270222 Entodinium caudatum partial mRNA for hypothetical protein similar to Plasmodium falciparum transmembrane protein, clone L32 Length = 685 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 534 ccagagacttcaatccatgtttttgagaaga 564 ||||||||||||||||| ||||| ||||||| Sbjct: 321 ccagagacttcaatccaagttttagagaaga 291
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 534 ccagagacttcaatccatgtttttgagaagagagc 568 ||||||||||||||||| || || ||||||||||| Sbjct: 1923471 ccagagacttcaatccaggtcttggagaagagagc 1923505
>dbj|AK071224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087B12, full insert sequence Length = 1692 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 499 ccttcagctgcttagcgacatccttggctgatgaaccagagacttcaatccatgt 553 |||||| ||| ||| | |||||||| || ||||| ||||| |||||||||||||| Sbjct: 1181 ccttcaactgtttaacaacatcctttgcagatgagccagaaacttcaatccatgt 1127
>ref|NM_201577.1| Danio rerio SEC61, beta subunit (sec61b), mRNA Length = 2550 Score = 44.1 bits (22), Expect = 0.54 Identities = 54/65 (83%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||| | ||| |||||||||||||||| ||||| || || | ||||| ||| || ||| Sbjct: 1459 tccttcacaaagatctcaaagtactggtagatgatagtgacggccaacaaaattccagtt 1400 Query: 354 cctga 358 ||||| Sbjct: 1399 cctga 1395 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 516 acatccttggctgatgaaccagagacttcaatccatgtttttgagaagagagcacatgct 575 ||||| ||||| ||||| || || ||||||||||| || |||||||||| ||||| | | Sbjct: 1237 acatctttggcagatgatccggaaacttcaatccaggtctttgagaagaaggcacacgat 1178 Query: 576 gacagcatgaaga 588 ||||||||||| Sbjct: 1177 cccagcatgaaga 1165
>ref|XM_875170.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 11 (LOC614128), mRNA Length = 2468 Score = 44.1 bits (22), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccaga 538 ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1324 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1272
>ref|XM_875091.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 10 (LOC614128), mRNA Length = 2477 Score = 44.1 bits (22), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccaga 538 ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1333 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1281
>ref|XM_875004.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 9 (LOC614128), mRNA Length = 2474 Score = 44.1 bits (22), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccaga 538 ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1330 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1278
>ref|XM_874932.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 8 (LOC614128), mRNA Length = 2492 Score = 44.1 bits (22), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccaga 538 ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1348 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1296
>ref|XM_874850.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 7 (LOC614128), mRNA Length = 2474 Score = 44.1 bits (22), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccaga 538 ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1330 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1278
>ref|XM_874762.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 6 (LOC614128), mRNA Length = 2477 Score = 44.1 bits (22), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccaga 538 ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1333 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1281
>ref|XM_874677.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 5 (LOC614128), mRNA Length = 2282 Score = 44.1 bits (22), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccaga 538 ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1138 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1086
>ref|XM_874591.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 4 (LOC614128), mRNA Length = 2165 Score = 44.1 bits (22), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccaga 538 ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1021 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 969
>ref|XM_864860.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 1 (LOC614128), mRNA Length = 2480 Score = 44.1 bits (22), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccaga 538 ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1336 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1284
>ref|XM_874348.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 2 (LOC614128), mRNA Length = 1893 Score = 44.1 bits (22), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccaga 538 ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 749 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 697
>gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete sequence Length = 164973 Score = 44.1 bits (22), Expect = 0.54 Identities = 39/45 (86%) Strand = Plus / Minus Query: 467 ctcgcgatggcctggcataaccatttgttgntccttcagctgctt 511 |||||||||||| |||| ||||| || || |||||||||||||| Sbjct: 83311 ctcgcgatggccacgcatcaccatgtgctgctccttcagctgctt 83267
>gb|AC093100.2| Drosophila melanogaster clone BACR05J04, complete sequence Length = 214621 Score = 44.1 bits (22), Expect = 0.54 Identities = 39/45 (86%) Strand = Plus / Minus Query: 467 ctcgcgatggcctggcataaccatttgttgntccttcagctgctt 511 |||||||||||| |||| ||||| || || |||||||||||||| Sbjct: 6976 ctcgcgatggccacgcatcaccatgtgctgctccttcagctgctt 6932
>emb|BX957236.8| Zebrafish DNA sequence from clone DKEY-178O3 in linkage group 6, complete sequence Length = 211391 Score = 44.1 bits (22), Expect = 0.54 Identities = 54/65 (83%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||| | ||| |||||||||||||||| ||||| || || | ||||| ||| || ||| Sbjct: 82818 tccttcacaaagatctcaaagtactggtagatgatagtgacggccaacaaaattccagtt 82759 Query: 354 cctga 358 ||||| Sbjct: 82758 cctga 82754 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 516 acatccttggctgatgaaccagagacttcaatccatgtttttgagaagagagcacatgct 575 ||||| ||||| ||||| || || ||||||||||| || |||||||||| ||||| | | Sbjct: 81994 acatctttggcagatgatccggaaacttcaatccaggtctttgagaagaaggcacacgat 81935 Query: 576 gacagcatgaaga 588 ||||||||||| Sbjct: 81934 cccagcatgaaga 81922
>gb|BC112848.1| Bos taurus similar to Sec61, alpha subunit 2, transcript variant 1, mRNA (cDNA clone MGC:137488 IMAGE:8168173), complete cds Length = 1924 Score = 44.1 bits (22), Expect = 0.54 Identities = 45/53 (84%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccaga 538 ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct: 1309 accatttgttgttctttaagctgtttagctacatcttttgctgaggaaccaga 1257
>gb|AY103474.1| Boreogadus saida Sec61-alpha mRNA, complete cds Length = 2472 Score = 44.1 bits (22), Expect = 0.54 Identities = 42/49 (85%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaatacc 349 ||||| ||||||||||||| || |||||||| |||| ||| || ||||| Sbjct: 1470 cgaagatctcaaagtactgatagatgatggtcacagccaagaggatacc 1422 Score = 42.1 bits (21), Expect = 2.1 Identities = 83/104 (79%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || ||||| ||||||||||| ||||| ||||| || || || ||||| || Sbjct: 1285 accatctgctgctccttaagctgcttagccacatctttggcagaggaccccgagacctcg 1226 Query: 546 atccatgtttttgagaagagagcacatgctgacagcatgaagac 589 ||||| || || ||||||| ||||| | | |||||||||||| Sbjct: 1225 atccaggtcttggagaagaaggcacaggatcccagcatgaagac 1182
>emb|BX027220.1|CNS08T60 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA40DB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 628 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||| ||||||||||| |||||||| || | || ||| |||||||| || || | Sbjct: 326 cgaagatctcgaagtactggtagatgatggtgacggccagcaggataccggtgccggagc 267 Query: 361 caattgcgcccatgaaatcagccag 385 | || || |||||||| || ||||| Sbjct: 266 cgatcgcacccatgaagtcggccag 242
>gb|AC149225.18| Danio rerio clone ch211-103f17, complete sequence Length = 185038 Score = 44.1 bits (22), Expect = 0.54 Identities = 54/65 (83%) Strand = Plus / Plus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||| | ||| |||||||||||||||| ||||| || || | ||||| ||| || ||| Sbjct: 86226 tccttcacaaagatctcaaagtactggtagatgatagtgacggccaacaaaattccagtt 86285 Query: 354 cctga 358 ||||| Sbjct: 86286 cctga 86290 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 516 acatccttggctgatgaaccagagacttcaatccatgtttttgagaaga 564 ||||| ||||| ||||| || || ||||||||||| || |||||||||| Sbjct: 87050 acatctttggcagatgatccggaaacttcaatccaggtctttgagaaga 87098
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 569 acatgctgacagcatgaagacc 590 |||||||||||||||||||||| Sbjct: 2617661 acatgctgacagcatgaagacc 2617682
>gb|AY034614.1| Danio rerio Sec61 alpha form B mRNA, complete cds Length = 2550 Score = 44.1 bits (22), Expect = 0.54 Identities = 54/65 (83%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||| | ||| |||||||||||||||| ||||| || || | ||||| ||| || ||| Sbjct: 1459 tccttcacaaagatctcaaagtactggtagatgatagtgacggccaacaaaattccagtt 1400 Query: 354 cctga 358 ||||| Sbjct: 1399 cctga 1395 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 516 acatccttggctgatgaaccagagacttcaatccatgtttttgagaagagagcacatgct 575 ||||| ||||| ||||| || || ||||||||||| || |||||||||| ||||| | | Sbjct: 1237 acatctttggcagatgatccggaaacttcaatccaggtctttgagaagaaggcacacgat 1178 Query: 576 gacagcatgaaga 588 ||||||||||| Sbjct: 1177 cccagcatgaaga 1165
>dbj|AK129816.1| Homo sapiens cDNA FLJ26305 fis, clone DMC07965 Length = 2174 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 107 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 48 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 47 caatggcgcctaggaagtcagccag 23
>ref|XM_319948.2| Anopheles gambiae str. PEST ENSANGP00000016786 (ENSANGG00000014297), partial mRNA Length = 1431 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Minus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||| ||||||||||| |||||||| || | || ||| |||||||| || || | Sbjct: 1384 cgaagatctcgaagtactggtagatgatggtgacggccagcaggataccggtgccggagc 1325 Query: 361 caattgcgcccatgaaatcagccag 385 | || || |||||||| || ||||| Sbjct: 1324 cgatcgcacccatgaagtcggccag 1300 Score = 42.1 bits (21), Expect = 2.1 Identities = 50/60 (83%) Strand = Plus / Minus Query: 467 ctcgcgatggcctggcataaccatttgttgntccttcagctgcttagcgacatccttggc 526 |||||| ||||| |||| ||||| || || |||||||||||||| || || |||||||| Sbjct: 1218 ctcgcggtggccgcgcatcaccatctgctgctccttcagctgcttcgccacgtccttggc 1159
>gb|BC048881.1| Danio rerio SEC61, beta subunit, mRNA (cDNA clone MGC:55672 IMAGE:3815496), complete cds Length = 2396 Score = 44.1 bits (22), Expect = 0.54 Identities = 54/65 (83%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggtt 353 |||||| | ||| |||||||||||||||| ||||| || || | ||||| ||| || ||| Sbjct: 1460 tccttcacaaagatctcaaagtactggtagatgatagtgacggccaacaaaattccagtt 1401 Query: 354 cctga 358 ||||| Sbjct: 1400 cctga 1396 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 516 acatccttggctgatgaaccagagacttcaatccatgtttttgagaagagagcacatgct 575 ||||| ||||| ||||| || || ||||||||||| || |||||||||| ||||| | | Sbjct: 1238 acatctttggcagatgatccggaaacttcaatccaggtctttgagaagaaggcacacgat 1179 Query: 576 gacagcatgaaga 588 ||||||||||| Sbjct: 1178 cccagcatgaaga 1166
>gb|AC011311.11| Homo sapiens 3 BAC RP11-525K18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187628 Score = 44.1 bits (22), Expect = 0.54 Identities = 69/85 (81%) Strand = Plus / Plus Query: 301 cgaaggtctcaaagtactggtatatgatggtaacagncaacagaataccggttcctgaac 360 ||||| |||||||||||||||| ||||| || || | | ||| || |||||||| || | Sbjct: 10791 cgaagatctcaaagtactggtagatgattgtgactgcgagcaggatcccggttccagacc 10850 Query: 361 caattgcgcccatgaaatcagccag 385 |||| ||||| | ||| |||||||| Sbjct: 10851 caatggcgcctaggaagtcagccag 10875
>gb|AE003613.4| Drosophila melanogaster chromosome 2L, section 22 of 83 of the complete sequence Length = 280095 Score = 44.1 bits (22), Expect = 0.54 Identities = 39/45 (86%) Strand = Plus / Plus Query: 467 ctcgcgatggcctggcataaccatttgttgntccttcagctgctt 511 |||||||||||| |||| ||||| || || |||||||||||||| Sbjct: 260896 ctcgcgatggccacgcatcaccatgtgctgctccttcagctgctt 260940
>ref|XM_535191.2| PREDICTED: Canis familiaris similar to Sec61, alpha subunit 2 (LOC478007), mRNA Length = 2026 Score = 42.1 bits (21), Expect = 2.1 Identities = 56/68 (82%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 |||||||| || || || ||||||||||| ||||| || || || |||||||| || || Sbjct: 1424 accatttgctgttctttaagctgcttagctacatctttagcagaggaaccagacacctct 1365 Query: 546 atccatgt 553 |||||||| Sbjct: 1364 atccatgt 1357
>emb|AL669838.22| Mouse DNA sequence from clone RP23-324A4 on chromosome 11 Contains the Adcy1 gene for adenylate cyclase 1, a novel gene and a CpG island, complete sequence Length = 189132 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 agccagccaagcagtactgtg 200 ||||||||||||||||||||| Sbjct: 61129 agccagccaagcagtactgtg 61109
>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23, complete sequence Length = 150305 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 atcaatcagaacccaaagaaa 275 ||||||||||||||||||||| Sbjct: 111961 atcaatcagaacccaaagaaa 111981
>emb|AL096856.1|ATT24C20 Arabidopsis thaliana DNA chromosome 3, BAC clone T24C20 Length = 103889 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 tccttctcgaaggtctcaaag 314 ||||||||||||||||||||| Sbjct: 73084 tccttctcgaaggtctcaaag 73064
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 atcaatcagaacccaaagaaa 275 ||||||||||||||||||||| Sbjct: 4484229 atcaatcagaacccaaagaaa 4484249
>ref|XM_341558.2| PREDICTED: Rattus norvegicus Sec61, alpha subunit 2 (S. cerevisiae) (predicted) (Sec61a2_predicted), mRNA Length = 2169 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 396 gcaccgatgcatactccaccaaatgcagcagcagtagggatgtatctgttcag 448 ||||||||||||| || ||||| ||||| || || |||||||| |||||||| Sbjct: 1491 gcaccgatgcatagacccccaaaggcagctgctgtggggatgtacctgttcag 1439
>gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, complete sequence Length = 173474 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cagccagccaagcagtactgt 199 ||||||||||||||||||||| Sbjct: 87791 cagccagccaagcagtactgt 87811
>gb|AC144776.2| Mus musculus BAC clone RP23-357B5 from chromosome 16, complete sequence Length = 190860 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 tgtatctgttcagttccttc 455 |||||||||||||||||||| Sbjct: 39904 tgtatctgttcagttccttc 39885
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 ccaccaaatgcagcagcagtaggg 434 |||||||||||| ||||||||||| Sbjct: 1271555 ccaccaaatgcaacagcagtaggg 1271578
>gb|AC091464.8| Mus musculus chromosome 14, clone RP23-97N1, complete sequence Length = 237814 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 agagagcacatgctgacagc 581 |||||||||||||||||||| Sbjct: 152570 agagagcacatgctgacagc 152551
>emb|CT009509.7| Mouse DNA sequence from clone RP23-140C10 on chromosome 13, complete sequence Length = 218144 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cagccagccaagcagtactg 198 |||||||||||||||||||| Sbjct: 106487 cagccagccaagcagtactg 106468
>gb|AC107759.18| Mus musculus chromosome 5, clone RP23-193N17, complete sequence Length = 262970 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 caaccaaaacagccagccaa 189 |||||||||||||||||||| Sbjct: 165739 caaccaaaacagccagccaa 165720
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 tttttgagaagagagcacat 572 |||||||||||||||||||| Sbjct: 865256 tttttgagaagagagcacat 865237
>gb|DQ400445.1| Ictalurus punctatus immunoglobulin heavy chain gene locus, partial sequence and unknown gene Length = 257153 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcagcagcagtagggatgta 439 |||||||||||||||||||| Sbjct: 77860 gcagcagcagtagggatgta 77841
>emb|AL355362.7| Human DNA sequence from clone RP3-480M22 on chromosome 6 Contains the 5' end of the gene for p53-induced protein PIGPC1 (PERP) and a CpG island, complete sequence Length = 23812 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 accaaatgcagcagcagtag 432 |||||||||||||||||||| Sbjct: 11620 accaaatgcagcagcagtag 11601
>gb|AY113840.1| Harpagifer antarcticus Sec61 (SEC61) mRNA, complete cds Length = 1453 Score = 40.1 bits (20), Expect = 8.4 Identities = 64/79 (81%) Strand = Plus / Minus Query: 486 accatttgttgntccttcagctgcttagcgacatccttggctgatgaaccagagacttca 545 ||||| || || ||||||||||| || || ||||| || || || || |||||||| || Sbjct: 1221 accatctgctgctccttcagctgtttcgccacatctttagcggaggagccagagacctcg 1162 Query: 546 atccatgtttttgagaaga 564 ||||| || |||||||||| Sbjct: 1161 atccaggtctttgagaaga 1143
>gb|AC107390.4| Homo sapiens BAC clone RP11-534O19 from 4, complete sequence Length = 114698 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 gagaagagagcacatgctga 577 |||||||||||||||||||| Sbjct: 89207 gagaagagagcacatgctga 89188
>gb|AC104072.3| Homo sapiens BAC clone RP11-320H14 from 4, complete sequence Length = 112494 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 gcccatgaaatcagccagaa 387 |||||||||||||||||||| Sbjct: 5512 gcccatgaaatcagccagaa 5531
>gb|M64400.1|ICTHAA1 Ictalurus punctatus Ig rearranged heavy chain variable region, partial cds Length = 405 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcagcagcagtagggatgta 439 |||||||||||||||||||| Sbjct: 22 gcagcagcagtagggatgta 3
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 471 cgatggcctggcataaccatttgt 494 |||| ||||||||||||||||||| Sbjct: 75273 cgatcgcctggcataaccatttgt 75250
>gb|AC068787.41| Homo sapiens 12 BAC RP11-483I24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173320 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 tggctgatgaaccagagact 542 |||||||||||||||||||| Sbjct: 43980 tggctgatgaaccagagact 43961
>gb|DQ230631.1| Ictalurus punctatus clone 6H09AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 452 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcagcagcagtagggatgta 439 |||||||||||||||||||| Sbjct: 52 gcagcagcagtagggatgta 33
>gb|DQ230627.1| Ictalurus punctatus clone 6D10AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 460 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcagcagcagtagggatgta 439 |||||||||||||||||||| Sbjct: 48 gcagcagcagtagggatgta 29
>gb|DQ230625.1| Ictalurus punctatus clone 6C10AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 452 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcagcagcagtagggatgta 439 |||||||||||||||||||| Sbjct: 52 gcagcagcagtagggatgta 33
>gb|DQ230624.1| Ictalurus punctatus clone 6C09AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 454 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcagcagcagtagggatgta 439 |||||||||||||||||||| Sbjct: 48 gcagcagcagtagggatgta 29
>gb|DQ230622.1| Ictalurus punctatus clone 6C02AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 456 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcagcagcagtagggatgta 439 |||||||||||||||||||| Sbjct: 47 gcagcagcagtagggatgta 28
>gb|DQ230620.1| Ictalurus punctatus clone 6B01AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 461 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcagcagcagtagggatgta 439 |||||||||||||||||||| Sbjct: 52 gcagcagcagtagggatgta 33
>gb|DQ230614.1| Ictalurus punctatus clone 3B09AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 466 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcagcagcagtagggatgta 439 |||||||||||||||||||| Sbjct: 51 gcagcagcagtagggatgta 32
>gb|DQ230613.1| Ictalurus punctatus clone 2F12AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 467 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcagcagcagtagggatgta 439 |||||||||||||||||||| Sbjct: 52 gcagcagcagtagggatgta 33
>gb|DQ230612.1| Ictalurus punctatus clone 1H07AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 457 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcagcagcagtagggatgta 439 |||||||||||||||||||| Sbjct: 51 gcagcagcagtagggatgta 32
>gb|DQ230611.1| Ictalurus punctatus clone 1E09AVH6 immunoglobulin heavy chain variable region mRNA, partial cds Length = 456 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcagcagcagtagggatgta 439 |||||||||||||||||||| Sbjct: 44 gcagcagcagtagggatgta 25
>emb|AL929305.4| Zebrafish DNA sequence from clone DKEY-110K5, complete sequence Length = 166110 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 ccaccaaatgcagcagcagt 430 |||||||||||||||||||| Sbjct: 33945 ccaccaaatgcagcagcagt 33926
>gb|AC152984.2| Mus musculus 6 BAC RP23-462B3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185001 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ccaccaaatgcagcagcagt 430 |||||||||||||||||||| Sbjct: 119204 ccaccaaatgcagcagcagt 119223
>dbj|AP002985.2| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2542M24, complete sequence Length = 205152 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 gcccatgaaatcagccagaa 387 |||||||||||||||||||| Sbjct: 127652 gcccatgaaatcagccagaa 127671 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,383,305 Number of Sequences: 3902068 Number of extensions: 5383305 Number of successful extensions: 90582 Number of sequences better than 10.0: 201 Number of HSP's better than 10.0 without gapping: 201 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90009 Number of HSP's gapped (non-prelim): 560 length of query: 619 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 596 effective length of database: 17,143,297,704 effective search space: 10217405431584 effective search space used: 10217405431584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
