| Clone Name | rbaal40j18 |
|---|---|
| Clone Library Name | barley_pub |
>ALL1_OLEEU (P19963) Major pollen allergen (Allergen Ole e 1) (Ole e I)| Length = 145 Score = 36.2 bits (82), Expect = 0.090 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 5/107 (4%) Frame = -1 Query: 520 IRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKSGEVINYQ--AFTNYKGVYSVAETMP 347 I+G+V CD C I + GA + + C K + + +T +G+YS+ + Sbjct: 13 IQGQVYCDTCRAGFITELSEFIPGASLRLQCKDKENGDVTFTEVGYTRAEGLYSM--LVE 70 Query: 346 ESDRWDSCLARPISSFHQHCTR---RGDAHSGVKFTYNKQSGSSHNV 215 + + C ISS + C G A +KF N +G++ V Sbjct: 71 RDHKNEFCEITLISSGRKDCNEIPTEGWAKPSLKFKLNTVNGTTRTV 117
>CHE1_CHEAL (Q8LGR0) Pollen allergen Che a 1 precursor| Length = 168 Score = 33.9 bits (76), Expect = 0.45 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 5/110 (4%) Frame = -1 Query: 523 EIRGRVVCDVCADSAIGPEDHVLEGAEVAVLC--ITKSGEVINYQAFTNYKGVYSVAETM 350 +++G V CD C + ++EGA V + C IT + +A T+ G YS+ Sbjct: 31 KVQGMVYCDTCRIQFMTRISTIMEGATVKLECRNITAGTQTFKAEAVTDKVGQYSIPVNG 90 Query: 349 PESDRWDSCLARPISSFHQHCTRRGD---AHSGVKFTYNKQSGSSHNVKT 209 D D C + S + C+ A K + +G + ++++ Sbjct: 91 DFED--DICEIELVKSPNSECSEVSHDVYAKQSAKVSLTSNNGEASDIRS 138
>LIGV1_LIGVU (O82015) Major pollen allergen Lig v 1| Length = 145 Score = 32.0 bits (71), Expect = 1.7 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Frame = -1 Query: 520 IRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKSGE----VINYQAFTNYKGVYSVAET 353 I+G+V CD C I + GA V + C K GE +T +G+Y++ Sbjct: 13 IQGQVYCDTCRARFITELSEFIPGAGVRLQC--KDGENGKVTFTEVGYTKAEGLYNM--L 68 Query: 352 MPESDRWDSCLARPISSFHQHCTR---RGDAHSGVKFTYNKQSGSSHNV 215 + + + C ISS + C G +KF N +G++ + Sbjct: 69 IERDHKNEFCEITLISSSRKDCDEIPTEGWVKPSLKFVLNTVNGTTRTI 117
>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein| 9.2) (Ultrahigh sulfur keratin-associated protein 9.2) Length = 174 Score = 30.8 bits (68), Expect = 3.8 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 8/73 (10%) Frame = +1 Query: 187 CWQACRGTS*RCASSPTVCCM*T*PQSVHRPSWCN--------AGGSC*WASPGTNPIGR 342 C CR TS + T CC T S +PS C+ G SC + + G+ Sbjct: 48 CQPCCRPTSCQNTCCRTTCCQPTCVTSCCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCGQ 107 Query: 343 SQALSLQRCRHPC 381 S + + CR C Sbjct: 108 SSSCAPVYCRRTC 120
>E316_ADE03 (P11320) Early E3 16 kDa glycoprotein| Length = 146 Score = 30.0 bits (66), Expect = 6.5 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 8/95 (8%) Frame = +3 Query: 42 PSVTDIGYNSRWADHYKHTVDQHLPYSDLTTSRPGM--------NPSYRFQLQYRGMLAG 197 PS T++ ++ A H +H + + L ++ TT + G +P G++AG Sbjct: 57 PSTTNLPETNKLASHLQHRLSRSLLSANTTTPKTGGELRGLPTDDPWVVAGFVTLGVVAG 116 Query: 198 L*RNVLTLCELPDCLLYVNLTPECASPLLVQCWWK 302 VL LC L TP CA +++ CW+K Sbjct: 117 --GLVLILCYL--------YTPCCAYLVILCCWFK 141
>LOLB_LOLPR (Q7M1X5) Major pollen allergen Lol p 11 (Lol p XI)| Length = 134 Score = 29.6 bits (65), Expect = 8.4 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Frame = -1 Query: 520 IRGRVVCDVCADSAIGPEDHVLEGAEVAVLCITKSG--EVINYQAFTNYKGVYSV 362 + GRV CD C H +EGA VAV C G + +A T+ G Y + Sbjct: 8 VTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKI 62
>UVRA_CHLMU (Q9PK60) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 1787 Score = 29.6 bits (65), Expect = 8.4 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = -1 Query: 391 FTNYKGVYSVAETMPESDRWDSCLARPISSFHQHCTRRGDAH-SGVKFTYNKQSGSSHNV 215 F N K V+S T+PE+ + L+ + S H H R H SG+ + N S N+ Sbjct: 231 FDNQKRVFSTQTTLPETQNTYTPLSPDLFSSHSHKDRCPQCHGSGIFVSINDPSIIQQNL 290
>GR85A_DROME (Q8INM9) Putative gustatory receptor 85a| Length = 397 Score = 29.6 bits (65), Expect = 8.4 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = +3 Query: 222 CELPDCLLY-VNLTPECASPLLVQCWWKLLMGLARHESHRSLSGI 353 C LP+C+++ +N + +CWW L GL +R LS + Sbjct: 186 CFLPECMIFSMNYLLFAILAEITRCWWSLQSGLKMVLLNRQLSTV 230 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,205,012 Number of Sequences: 219361 Number of extensions: 1704837 Number of successful extensions: 4732 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4564 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4730 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)