>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 23/66 (34%), Positives = 37/66 (56%)
 Frame = -3

Query: 291  AVVRSRCGSDP*FPETQPTLRGAPRGCRMTSVVRLVVHDGSVAYLPSTPPRRFSRLDGPL 112
            AV  S  G DP FP   P    +P+   + ++ +L V D +V  + +TPP  FSRL+   
Sbjct: 2311 AVCPSAHGQDP-FPSCGPNSVLSPQRLALEALCKLCVTDANVDLVIATPP--FSRLE--- 2364

Query: 111  QVCSLL 94
            ++C++L
Sbjct: 2365 KLCAVL 2370

>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 24/62 (38%), Positives = 25/62 (40%), Gaps = 12/62 (19%)
 Frame = +2

Query: 2    TPSGDLRRQQVLPVRERRYGRARP-----RSQHPERNKEHTWRGPSR-------RENRRG 145
            T SGDL      P RER   R RP     R  H   +  H  RGP R       R  RRG
Sbjct: 2194 TQSGDL------PSREREQERGRPKDRKHRPHHHHHHHHHPGRGPGRVSPGVSARRRRRG 2247

Query: 146  GV 151
             V
Sbjct: 2248 PV 2249

>XDH_RAT (P22985) Xanthine dehydrogenase/oxidase [Includes: Xanthine|
           dehydrogenase (EC 1.17.1.4) (XD); Xanthine oxidase (EC
           1.17.3.2) (XO) (Xanthine oxidoreductase)]
          Length = 1330

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -2

Query: 193 ASRSARWVRCLLAKYPTSTVFASRRPPPSMFLVAFRMLGSRASSSIASFANG 38
           A ++ R VRC+L +     +   R P  + + V F   G+  +  +A F+NG
Sbjct: 815 AHKTGRPVRCMLDRDEDMLITGGRHPFLAKYKVGFMKTGTVVALEVAHFSNG 866

>XDH_MOUSE (Q00519) Xanthine dehydrogenase/oxidase [Includes: Xanthine|
           dehydrogenase (EC 1.17.1.4) (XD); Xanthine oxidase (EC
           1.17.3.2) (XO) (Xanthine oxidoreductase)]
          Length = 1334

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -2

Query: 193 ASRSARWVRCLLAKYPTSTVFASRRPPPSMFLVAFRMLGSRASSSIASFANG 38
           A ++ R VRC+L +     +   R P  + + V F   G+  +  +A F+NG
Sbjct: 818 AYKTGRPVRCMLDRDEDMLITGGRHPFLAKYKVGFMKTGTIVALEVAHFSNG 869

>HUTG_VIBCH (Q9KSQ2) Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase)|
           (Formiminoglutamate hydrolase)
          Length = 336

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 19/62 (30%), Positives = 25/62 (40%)
 Frame = +3

Query: 108 LGGGRRDAKTVEVGYLASKQRTHRALRDARQKSYGIREEHRVTWAVFQGIMDRFRTESAR 287
           LG  R +   +E       Q   +AL  AR    G    H + WA FQG+   F     +
Sbjct: 90  LGNIRCEGDELEQAQQECAQVIQQALPHARAIVLG--GGHEIAWATFQGLAQHFLATGVK 147

Query: 288 QP 293
           QP
Sbjct: 148 QP 149

>VE2_HPV1A (P03118) Regulatory protein E2|
          Length = 401

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = +2

Query: 20  RRQQVLPVRERRYGRARPRSQHPERNKEHTWRGPSRRE 133
           +RQQ  PVR R YGR R RS           RG  RRE
Sbjct: 248 QRQQKTPVRRRPYGRRRSRSP----------RGGGRRE 275

>O2T34_HUMAN (Q8NGX1) Olfactory receptor 2T34 (Olfactory receptor OR1-63)|
          Length = 318

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
 Frame = -3

Query: 225 APRGCRMTSVVRLVVHDGSVAYLPSTPPRRFSRLDGPL--------QVCSLLRSGCWDLG 70
           +P GC +     L +    V  L +    R++ +  PL        +VC LL S CW LG
Sbjct: 98  SPSGCGIQMFFHLTLAGAEVFLLAAMAYDRYAAVCRPLHYPLLMNQRVCQLLVSACWVLG 157

>DPO1_THEAQ (P19821) DNA polymerase I, thermostable (EC 2.7.7.7) (Taq|
           polymerase 1)
          Length = 832

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -1

Query: 341 SPDGPRVRRAFIQERCWLSCAL 276
           +P G R+RRAFI E  WL  AL
Sbjct: 588 TPLGQRIRRAFIAEEGWLLVAL 609

>SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130|
           (Serine-arginine-rich splicing regulatory protein 130)
           (SRrp130) (SR-rich protein) (SR-related protein)
          Length = 805

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 20  RRQQVLPVRERRYGRARPRSQHPERNKEHTWRGPSRRENRRGGVLG 157
           RR+   P RERR  R+R R +   R      R   + +++RG + G
Sbjct: 606 RRRNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKIDDQRGNLSG 651

>MURB_BURS3 (Q39DI6) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
          Length = 349

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -1

Query: 359 EVDVYFSPDGP-RVRRAFIQERC-WLSCALGAEAIHD 255
           EV  Y  PDG  ++   ++ +RC W   ALGA A+HD
Sbjct: 270 EVVSYPQPDGQVKLAAGWLIDRCGWKGRALGAAAVHD 306

>HSP1_TRIVU (P42152) Sperm protamine P1|
          Length = 61

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 20  RRQQVLPVRERRYGRARPRSQHPERNKEHTWRGPSRRENRR 142
           RR+     R RRY R+R R +   R + ++ R  SRR  RR
Sbjct: 20  RRRSRYRSRRRRYRRSRRRRRRGRRRRGYSRRRYSRRGRRR 60

>YL041_MIMIV (Q5UPC0) Hypothetical protein L41|
          Length = 478

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 20  RRQQVLPVRERRYGRARPRSQHPERNKEHTWRGPSRRENR 139
           R++  LP+RER    +R RS+ P R +   +R P R  +R
Sbjct: 163 RKRSRLPLRERSRSPSRERSRSPLRER---YRSPLRERSR 199

>PIT1_ONCMY (Q08478) Pituitary-specific positive transcription factor 1 (Pit-1)|
           (Growth hormone factor 1) (GHF-1)
          Length = 358

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +1

Query: 202 SHTASARSTA*RGLCFRESWIASAPRAHDSQQRSWMNALLTRGPSGLKYTSTSC 363
           +HT +  S    GL    S + S+ R+H     S +   L+ GP GL Y  T C
Sbjct: 38  THTHNMVSAVPSGL----SLLQSSKRSHMHLSTSTLGNALSNGPPGLHYPVTPC 87

>HTPG_RICFE (Q4UJV5) Chaperone protein htpG (Heat shock protein htpG) (High|
           temperature protein G)
          Length = 621

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 20/76 (26%), Positives = 35/76 (46%)
 Frame = +3

Query: 171 THRALRDARQKSYGIREEHRVTWAVFQGIMDRFRTESARQPATLLDECPSYSWAIRTEVY 350
           T R L + ++K     EE+   WA F G +     E+      LL+ C       R+ ++
Sbjct: 345 TKRVLGELKKKKEESPEEYNKFWANFGGALKEGLCEATTDHEKLLEVC-----IFRSALH 399

Query: 351 VDFLWRSVDKFAAGFE 398
              +  S+D++ AGF+
Sbjct: 400 NKMI--SLDEYIAGFK 413

>DAG1_HUMAN (Q14118) Dystroglycan precursor (Dystrophin-associated glycoprotein|
           1) [Contains: Alpha-dystroglycan (Alpha-DG);
           Beta-dystroglycan (Beta-DG)]
          Length = 895

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
 Frame = +2

Query: 182 TTRRTTEVIRHPRGAPR---NVGCVSGNHGSLPHRERTTASNAP 304
           TTRR T+  R PR  PR    V        S P R RTT S  P
Sbjct: 445 TTRRPTKKPRTPRPVPRVTTKVSITRLETASPPTRIRTTTSGVP 488

>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor|
           50 kDa subunit) (U2 snRNP auxiliary factor large
           subunit)
          Length = 416

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 44  RERRYGRARPRSQHPERNKEHTWRGPSRRE 133
           RERR  R+R R +H ER+++      SRR+
Sbjct: 10  RERRRHRSRSRDRHRERSRDRRHHRNSRRK 39

>OR2T3_HUMAN (Q8NH03) Olfactory receptor 2T3|
          Length = 318

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
 Frame = -3

Query: 225 APRGCRMTSVVRLVVHDGSVAYLPSTPPRRFSRLDGPL--------QVCSLLRSGCWDLG 70
           +P GC +     L +    V  L +    R++ +  PL        +VC LL S CW LG
Sbjct: 98  SPSGCGIQMFFYLTLAGAEVFLLAAMAYDRYAAVCRPLHYPLLMNQRVCQLLVSACWVLG 157

>RL31_THEMA (O54311) 50S ribosomal protein L31|
          Length = 71

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 321 KKGIHPGALLAVVRSRCGSDP*FPETQPTLR 229
           KKGIHP   L  V+  CG++  F  T   +R
Sbjct: 2   KKGIHPEMKLVTVKCACGAEHTFYTTVDNIR 32


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,252,161
Number of Sequences: 219361
Number of extensions: 1476530
Number of successful extensions: 4376
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4373
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)