>GABR1_MOUSE (Q9WV18) Gamma-aminobutyric acid type B receptor, subunit 1|
           precursor (GABA-B receptor 1) (GABA-B-R1) (Gb1)
          Length = 960

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 28/95 (29%), Positives = 48/95 (50%)
 Frame = +1

Query: 295 KTRHLLEQSGRADQNMSTKQLPNTPKFLGRLLFTLSIRLVDATGLVVPYVLLAISACDAH 474
           KT   +  S  ADQ +  K    T +FL + LF +S+ ++ + G+V+  V L+ +  ++H
Sbjct: 563 KTDKWIGGSPPADQTLVIK----TFRFLSQKLF-ISVSVLSSLGIVLAVVCLSFNIYNSH 617

Query: 475 LRDLLYNVPVLPALQAAPE*RECALQLEPTQAIGL 579
           +R +  + P L  L A      C+L L     +GL
Sbjct: 618 VRYIQNSQPNLNNLTAV----GCSLALAAVFPLGL 648

>GABR1_HUMAN (Q9UBS5) Gamma-aminobutyric acid type B receptor, subunit 1|
           precursor (GABA-B receptor 1) (GABA-B-R1) (Gb1)
          Length = 961

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 28/95 (29%), Positives = 48/95 (50%)
 Frame = +1

Query: 295 KTRHLLEQSGRADQNMSTKQLPNTPKFLGRLLFTLSIRLVDATGLVVPYVLLAISACDAH 474
           KT   +  S  ADQ +  K    T +FL + LF +S+ ++ + G+V+  V L+ +  ++H
Sbjct: 564 KTDKWIGGSPPADQTLVIK----TFRFLSQKLF-ISVSVLSSLGIVLAVVCLSFNIYNSH 618

Query: 475 LRDLLYNVPVLPALQAAPE*RECALQLEPTQAIGL 579
           +R +  + P L  L A      C+L L     +GL
Sbjct: 619 VRYIQNSQPNLNNLTAV----GCSLALAAVFPLGL 649

>GABR1_RAT (Q9Z0U4) Gamma-aminobutyric acid type B receptor, subunit 1|
           precursor (GABA-B receptor 1) (GABA-B-R1) (Gb1)
          Length = 991

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 28/95 (29%), Positives = 48/95 (50%)
 Frame = +1

Query: 295 KTRHLLEQSGRADQNMSTKQLPNTPKFLGRLLFTLSIRLVDATGLVVPYVLLAISACDAH 474
           KT   +  S  ADQ +  K    T +FL + LF +S+ ++ + G+V+  V L+ +  ++H
Sbjct: 563 KTDKWIGGSPPADQTLVIK----TFRFLSQKLF-ISVSVLSSLGIVLAVVCLSFNIYNSH 617

Query: 475 LRDLLYNVPVLPALQAAPE*RECALQLEPTQAIGL 579
           +R +  + P L  L A      C+L L     +GL
Sbjct: 618 VRYIQNSQPNLNNLTAV----GCSLALAAVFPLGL 648

>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription|
           termination factor ctf1)
          Length = 363

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 20/72 (27%), Positives = 35/72 (48%)
 Frame = +1

Query: 25  KEKKNKSMYTSGNTFHSSKSIKLNLYNLQIARTRKRKRITH*VLVKDLSQVQYWEREKNG 204
           K  +NK  YTSG +  +  SI L    +Q+  T   + + +  ++  L  V +   E+  
Sbjct: 192 KSSQNKGDYTSGTSISNPTSIPLAPSVVQVLSTFSAQELLN--MLSKLQTVVHIAPEEAR 249

Query: 205 HLLTDSPKIPYS 240
            LL  +P +PY+
Sbjct: 250 RLLIANPALPYA 261

>ATKA_PSESM (Q883V6) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 564

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +1

Query: 364 TPKFLGRLLFTLSIRLVDATGLVVPYVLLAISACDAHL 477
           TP++LG+ L    +RL+ AT LV+P  +L + A  A L
Sbjct: 405 TPEYLGKKLQAQEVRLLVATLLVMPVGVLVLGAIAASL 442

>RSMB_PASMU (Q9CKP7) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 446

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 11/45 (24%), Positives = 27/45 (60%)
 Frame = -1

Query: 513 GGKNWHVVQQIPEVRITSTDGKKYIRYNKARRIYETNAQCEEKST 379
           GGK  H+++Q P+  + + D    +   + +R++E  A+ ++++T
Sbjct: 265 GGKTTHILEQAPQAHVVALD----VEATRLKRVHENLARMQQQAT 305

>CP2J2_HUMAN (P51589) Cytochrome P450 2J2 (EC 1.14.14.1) (CYPIIJ2) (Arachidonic|
           acid epoxygenase)
          Length = 502

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +1

Query: 154 LVKDLSQVQYWEREKNGHLLTDSPKIPYSFHGPHQTIXSN 273
           L+K L +V Y E  K   L    P I     GPHQT+ SN
Sbjct: 211 LLKLLDEVTYLEASKTCQLYNVFPWIMKFLPGPHQTLFSN 250

>ATKA_THETN (Q8R8I5) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 561

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 364 TPKFLGRLLFTLSIRLVDATGLVVPYVLLAISACDAHLR 480
           TP++LGR + T  I+L+    LV P+++L  SA    L+
Sbjct: 403 TPEYLGRKIETKEIKLIALAILVHPFLILFSSALTVMLK 441

>NR2F5_BRARE (Q06726) Nuclear receptor Nr2f5 (Steroid receptor homolog SVP 46)|
          Length = 403

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
 Frame = +1

Query: 313 EQSGRADQNMSTKQLPNTPKFLGRLLFTL-SIRLVDATGLVVPYV--LLAISACDAHLRD 483
           E+S  A +     Q PN P   GRLL  L S+R+V +  +   +   L+  +  +  LRD
Sbjct: 314 EKSQCALEEYVRNQYPNQPNRFGRLLLRLPSLRIVSSPVIEQLFFVRLVGKTPIETLLRD 373

Query: 484 LL-----YNVPVLPALQAAP 528
           +L     YN P +P  +  P
Sbjct: 374 MLLSGSSYNWPYMPVQRDRP 393


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,376,827
Number of Sequences: 219361
Number of extensions: 1949311
Number of successful extensions: 5429
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5428
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)