>ref|XM_465455.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3938

 Score =  107 bits (54), Expect = 4e-20
 Identities = 141/170 (82%)
 Strand = Plus / Minus

                                                                        
Query: 389  tcttcacactgagcattcgtctcgtagatgcgacgggccttgttgtaccttatgtacttc 448
            |||||| | |||||||||||||| |||||||  |||   ||||||||||  |||||| ||
Sbjct: 3680 tcttcagattgagcattcgtctcatagatgcaccggcgtttgttgtaccggatgtacctc 3621

                                                                        
Query: 449  ttgccatcagtgcttgtgatgcgcacctcagggatctgctgtacaacgtgccagttcttc 508
            |||||||| ||||| ||||| |||||||| ||||||||||| || | |  ||||||||| 
Sbjct: 3620 ttgccatcggtgctggtgatccgcacctcggggatctgctgaacgatgctccagttcttg 3561

                                                              
Query: 509  ccgccctccaggcagctcctgagtaaagggagtgtgcactgcagctcgaa 558
            || || ||||||||||||||||| || | |||  ||||||| ||||||||
Sbjct: 3560 ccaccgtccaggcagctcctgagcaatgagaggctgcactgaagctcgaa 3511

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  107 bits (54), Expect = 4e-20
 Identities = 141/170 (82%)
 Strand = Plus / Minus

                                                                            
Query: 389      tcttcacactgagcattcgtctcgtagatgcgacgggccttgttgtaccttatgtacttc 448
                |||||| | |||||||||||||| |||||||  |||   ||||||||||  |||||| ||
Sbjct: 15296134 tcttcagattgagcattcgtctcatagatgcaccggcgtttgttgtaccggatgtacctc 15296075

                                                                            
Query: 449      ttgccatcagtgcttgtgatgcgcacctcagggatctgctgtacaacgtgccagttcttc 508
                |||||||| ||||| ||||| |||||||| ||||||||||| || | |  ||||||||| 
Sbjct: 15296074 ttgccatcggtgctggtgatccgcacctcggggatctgctgaacgatgctccagttcttg 15296015

                                                                  
Query: 509      ccgccctccaggcagctcctgagtaaagggagtgtgcactgcagctcgaa 558
                || || ||||||||||||||||| || | |||  ||||||| ||||||||
Sbjct: 15296014 ccaccgtccaggcagctcctgagcaatgagaggctgcactgaagctcgaa 15295965

>dbj|AP005696.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0063K04
          Length = 158792

 Score =  107 bits (54), Expect = 4e-20
 Identities = 141/170 (82%)
 Strand = Plus / Minus

                                                                          
Query: 389    tcttcacactgagcattcgtctcgtagatgcgacgggccttgttgtaccttatgtacttc 448
              |||||| | |||||||||||||| |||||||  |||   ||||||||||  |||||| ||
Sbjct: 107255 tcttcagattgagcattcgtctcatagatgcaccggcgtttgttgtaccggatgtacctc 107196

                                                                          
Query: 449    ttgccatcagtgcttgtgatgcgcacctcagggatctgctgtacaacgtgccagttcttc 508
              |||||||| ||||| ||||| |||||||| ||||||||||| || | |  ||||||||| 
Sbjct: 107195 ttgccatcggtgctggtgatccgcacctcggggatctgctgaacgatgctccagttcttg 107136

                                                                
Query: 509    ccgccctccaggcagctcctgagtaaagggagtgtgcactgcagctcgaa 558
              || || ||||||||||||||||| || | |||  ||||||| ||||||||
Sbjct: 107135 ccaccgtccaggcagctcctgagcaatgagaggctgcactgaagctcgaa 107086

>dbj|AK066598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E17, full
            insert sequence
          Length = 3939

 Score =  107 bits (54), Expect = 4e-20
 Identities = 141/170 (82%)
 Strand = Plus / Minus

                                                                        
Query: 389  tcttcacactgagcattcgtctcgtagatgcgacgggccttgttgtaccttatgtacttc 448
            |||||| | |||||||||||||| |||||||  |||   ||||||||||  |||||| ||
Sbjct: 3680 tcttcagattgagcattcgtctcatagatgcaccggcgtttgttgtaccggatgtacctc 3621

                                                                        
Query: 449  ttgccatcagtgcttgtgatgcgcacctcagggatctgctgtacaacgtgccagttcttc 508
            |||||||| ||||| ||||| |||||||| ||||||||||| || | |  ||||||||| 
Sbjct: 3620 ttgccatctgtgctggtgatccgcacctcggggatctgctgaacgatgctccagttcttg 3561

                                                              
Query: 509  ccgccctccaggcagctcctgagtaaagggagtgtgcactgcagctcgaa 558
            || || ||||||||||||||||| || | |||  ||||||| ||||||||
Sbjct: 3560 ccaccgtccaggcagctcctgagcaatgagaggctgcactgaagctcgaa 3511

>emb|AJ307886.1|ZMA307886 Zea mays partial mRNA for pollen signalling protein with adenylyl
            cyclase activity (psiP gene)
          Length = 3051

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 111/136 (81%)
 Strand = Plus / Minus

                                                                        
Query: 396  actgagcattcgtctcgtagatgcgacgggccttgttgtaccttatgtacttcttgccat 455
            |||| ||||| || ||||||||||| |||  |||||| ||||  | |||  |||||||||
Sbjct: 2683 actgtgcattagtttcgtagatgcggcggctcttgttataccgaaagtatctcttgccat 2624

                                                                        
Query: 456  cagtgcttgtgatgcgcacctcagggatctgctgtacaacgtgccagttcttcccgccct 515
            |   |||| ||||||||||||| ||||||||||| || |  ||||||||||| || || |
Sbjct: 2623 cgcagcttatgatgcgcacctcggggatctgctgcacgagatgccagttcttgccaccgt 2564

                            
Query: 516  ccaggcagctcctgag 531
            | ||||||||||||||
Sbjct: 2563 cgaggcagctcctgag 2548



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/46 (89%), Gaps = 2/46 (4%)
 Strand = Plus / Minus

                                                          
Query: 121  accaggaaacggaaaagaatcacacat--tgagtactggtgaagga 164
            |||||||||| ||||||||| ||||||  ||||| |||||||||||
Sbjct: 2954 accaggaaacagaaaagaattacacatattgagtcctggtgaagga 2909

>gb|AY108814.1| Zea mays PCO106801 mRNA sequence
          Length = 1531

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 111/136 (81%)
 Strand = Plus / Minus

                                                                        
Query: 396  actgagcattcgtctcgtagatgcgacgggccttgttgtaccttatgtacttcttgccat 455
            |||| ||||| || ||||||||||| |||  |||||| ||||  | |||  |||||||||
Sbjct: 1126 actgtgcattagtttcgtagatgcggcggctcttgttataccgaaagtatctcttgccat 1067

                                                                        
Query: 456  cagtgcttgtgatgcgcacctcagggatctgctgtacaacgtgccagttcttcccgccct 515
            |   |||| ||||||||||||| ||||||||||| || |  ||||||||||| || || |
Sbjct: 1066 cgcagcttatgatgcgcacctcggggatctgctgcacgagatgccagttcttgccaccgt 1007

                            
Query: 516  ccaggcagctcctgag 531
            | ||||||||||||||
Sbjct: 1006 cgaggcagctcctgag 991



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/46 (89%), Gaps = 2/46 (4%)
 Strand = Plus / Minus

                                                          
Query: 121  accaggaaacggaaaagaatcacacat--tgagtactggtgaagga 164
            |||||||||| ||||||||| ||||||  ||||| |||||||||||
Sbjct: 1397 accaggaaacagaaaagaattacacatattgagtcctggtgaagga 1352

>gb|AC148477.3| Homo sapiens 12 BAC RP13-895J2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 160802

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 505    cttcccgccctccaggcagctcc 527
              |||||||||||||||||||||||
Sbjct: 115331 cttcccgccctccaggcagctcc 115353

>emb|AL117193.2|CEY105C5A Caenorhabditis elegans YAC Y105C5A, complete sequence
          Length = 314838

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 118    agaaccaggaaacggaaaagaa 139
              ||||||||||||||||||||||
Sbjct: 193458 agaaccaggaaacggaaaagaa 193437



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 118    agaaccaggaaacggaaaagaa 139
              ||||||||||||||||||||||
Sbjct: 188385 agaaccaggaaacggaaaagaa 188406

>gb|AC145956.4| Gallus gallus BAC clone CH261-14N1 from chromosome unknown, complete
              sequence
          Length = 243969

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 179    agtactgggaaagggagaaaaa 200
              ||||||||||||||||||||||
Sbjct: 161516 agtactgggaaagggagaaaaa 161495

>gb|AE014304.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 1 of
              11 of the complete sequence
          Length = 250029

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 252    tcatcaaaccatttntagtaacaa 275
              |||||||||||||| |||||||||
Sbjct: 109941 tcatcaaaccatttttagtaacaa 109964

>emb|AL354771.14| Human DNA sequence from clone RP11-545P21 on chromosome 1q25.1-31.1
              Contains part of the gene for DBCCR1-like (DBCCR1L) and
              part of a novel gene, complete sequence
          Length = 150195

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 74     catcaaaatccatcaagctca 94
              |||||||||||||||||||||
Sbjct: 130285 catcaaaatccatcaagctca 130265

>emb|AL161771.17| Human DNA sequence from clone RP11-11L8 on chromosome 13 Contains the
             SLC10A2 gene for solute carrier family 10 (sodium/bile
             acid cotransporter family, member 2, complete sequence
          Length = 171132

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 252   tcatcaaaccatttntagtaacaa 275
             |||||||||||||| |||||||||
Sbjct: 91115 tcatcaaaccatttttagtaacaa 91138

>gb|AC011631.6|AC011631 Homo sapiens, clone RP11-1I20, complete sequence
          Length = 158236

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 74    catcaaaatccatcaagctca 94
             |||||||||||||||||||||
Sbjct: 13352 catcaaaatccatcaagctca 13372

>ref|XM_360615.1| Magnaporthe grisea 70-15 hypothetical protein (MG03158.4) partial
           mRNA
          Length = 3270

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 tttaagccaagttcagtact 184
           ||||||||||||||||||||
Sbjct: 435 tttaagccaagttcagtact 454

>ref|XM_613785.2| PREDICTED: Bos taurus similar to family with sequence similarity 48,
            member A isoform a (LOC534126), mRNA
          Length = 4173

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  ttcagtactgggaaagggag 195
            ||||||||||||||||||||
Sbjct: 2088 ttcagtactgggaaagggag 2107

>gb|AC138401.9| Mus musculus chromosome 13, clone RP24-79G5, complete sequence
          Length = 209942

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   gagaaaaatggtcatctgct 212
             ||||||||||||||||||||
Sbjct: 50917 gagaaaaatggtcatctgct 50898

>ref|XM_583871.2| PREDICTED: Bos taurus similar to Beta-chimaerin (Beta-chimerin)
            (Rho-GTPase-activating protein 3) (LOC507285), partial
            mRNA
          Length = 2826

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 428  ttgttgtaccttatgtacttcttg 451
            |||||||| |||||||||||||||
Sbjct: 2692 ttgttgtagcttatgtacttcttg 2715

>gb|AC125395.3| Mus musculus BAC clone RP23-213J1 from chromosome 14, complete sequence
          Length = 208938

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   caaatactccaaaattttta 378
             ||||||||||||||||||||
Sbjct: 68965 caaatactccaaaattttta 68946

>gb|AC114593.12| Mus musculus chromosome 14, clone RP23-44B17, complete sequence
          Length = 210843

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   caaatactccaaaattttta 378
             ||||||||||||||||||||
Sbjct: 70870 caaatactccaaaattttta 70851

>gb|AC114824.5| Mus musculus BAC clone RP23-342J11 from chromosome 17, complete
             sequence
          Length = 216044

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 529   gagtaaagggagtgtgcactgcag 552
             |||| |||||||||||||||||||
Sbjct: 69123 gagtgaagggagtgtgcactgcag 69100

>gb|AC117194.3| Mus musculus BAC clone RP23-92K11 from 12, complete sequence
          Length = 204913

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 359    caaatactccaaaattttta 378
              ||||||||||||||||||||
Sbjct: 191015 caaatactccaaaattttta 190996

>ref|XM_646528.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (155.t00007)
            partial mRNA
          Length = 2991

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   atctttacaatttacaaatc 114
            ||||||||||||||||||||
Sbjct: 1074 atctttacaatttacaaatc 1055

>gb|BC105571.1| Bos taurus similar to family with sequence similarity 48, member A
            isoform a, mRNA (cDNA clone MGC:129081 IMAGE:8121734),
            complete cds
          Length = 2691

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  ttcagtactgggaaagggag 195
            ||||||||||||||||||||
Sbjct: 1499 ttcagtactgggaaagggag 1518

>gb|BC114099.1| Bos taurus similar to Beta-chimaerin (Beta-chimerin)
            (Rho-GTPase-activating protein 3), mRNA (cDNA clone
            MGC:137510 IMAGE:8167404), complete cds
          Length = 2899

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 428  ttgttgtaccttatgtacttcttg 451
            |||||||| |||||||||||||||
Sbjct: 2583 ttgttgtagcttatgtacttcttg 2606

>emb|AL137019.6| Human DNA sequence from clone RP11-143P10 on chromosome 9q31.3-33.1,
             complete sequence
          Length = 181542

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    tggcaatactttccactcat 76
             ||||||||||||||||||||
Sbjct: 57552 tggcaatactttccactcat 57571

>emb|AJ314602.1|CBA314602 Candidia barbatus mRNA for putative estrogen receptor
          Length = 1890

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 154 ctggtgaaggatttaagcca 173
           ||||||||||||||||||||
Sbjct: 537 ctggtgaaggatttaagcca 518

>gb|AC023793.13| Homo sapiens 3 BAC RP11-91F9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 151230

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    ctgactgattcaccaaaaat 230
              ||||||||||||||||||||
Sbjct: 102360 ctgactgattcaccaaaaat 102379

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 561     gacgcaggccattggcctgc 580
               ||||||||||||||||||||
Sbjct: 3404649 gacgcaggccattggcctgc 3404630

>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    accaggaaacggaaaagaat 140
              ||||||||||||||||||||
Sbjct: 237587 accaggaaacggaaaagaat 237568

>gb|CP000040.1| Bacillus cereus E33L plasmid pE33L466, complete sequence
          Length = 466370

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 188    aaagggagaaaaatggtcat 207
              ||||||||||||||||||||
Sbjct: 331835 aaagggagaaaaatggtcat 331816

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 8        aaaacattctgacacgaaaa 27
                ||||||||||||||||||||
Sbjct: 23691752 aaaacattctgacacgaaaa 23691733

>gb|AC090884.1|AC090884 Homo sapiens chromosome 3 clone RP11-165B2 map 3p, complete sequence
          Length = 166991

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    ttgtaccttatgtacttctt 450
              ||||||||||||||||||||
Sbjct: 163081 ttgtaccttatgtacttctt 163100

>gb|AC090646.2| Homo sapiens chromosome 3 clone RP11-690A6 map 3p, complete sequence
          Length = 165681

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    ttgtaccttatgtacttctt 450
              ||||||||||||||||||||
Sbjct: 131166 ttgtaccttatgtacttctt 131185

>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aaaacattctgacacgaaaa 27
             ||||||||||||||||||||
Sbjct: 36366 aaaacattctgacacgaaaa 36347

>ref|NM_210796.1| Eremothecium gossypii AFL108Cp (AFL108C), mRNA
          Length = 4362

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  accaggaaacggaaaagaat 140
            ||||||||||||||||||||
Sbjct: 1816 accaggaaacggaaaagaat 1835

>gb|AC142112.3| Mus musculus BAC clone RP24-87H1 from 12, complete sequence
          Length = 229085

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   caaatactccaaaattttta 378
             ||||||||||||||||||||
Sbjct: 11950 caaatactccaaaattttta 11931


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,889,096
Number of Sequences: 3902068
Number of extensions: 4889096
Number of successful extensions: 93872
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93692
Number of HSP's gapped (non-prelim): 176
length of query: 588
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 565
effective length of database: 17,143,297,704
effective search space: 9685963202760
effective search space used: 9685963202760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)