ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal40i20 |
|---|---|
| Clone Library Name | barley_pub |
>Y1165_HAEIN (P45085) Hypothetical monothiol glutaredoxin HI1165| Length = 120 Score = 53.9 bits (128), Expect = 1e-07 Identities = 22/39 (56%), Positives = 32/39 (82%) Frame = -3 Query: 266 TYSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLSE 150 TY+NWPTFPQL+ + EL+GG I+LE+ ++GEL+ L+E Sbjct: 76 TYANWPTFPQLWVEGELIGGCDIILEMYQAGELQTLLAE 114
>Y176_BUCBP (Q89AR8) Hypothetical monothiol glutaredoxin bbp_176| Length = 108 Score = 53.5 bits (127), Expect = 1e-07 Identities = 23/37 (62%), Positives = 29/37 (78%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLS 153 Y+NWPTFPQL+ EL+GG I+LEL + GELK T+S Sbjct: 65 YANWPTFPQLWVNGELIGGCNIILELFQKGELKKTIS 101
>Y181_BUCAP (Q8K9V6) Hypothetical monothiol glutaredoxin BUsg181| Length = 107 Score = 53.1 bits (126), Expect = 2e-07 Identities = 22/37 (59%), Positives = 30/37 (81%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLS 153 Y+NWPTFPQL+ K EL+GG I+LE+ ++GELK +S Sbjct: 64 YANWPTFPQLWIKGELIGGCSIILEMLENGELKKIIS 100
>TXNL2_HUMAN (O76003) Thioredoxin-like protein 2 (PKC-interacting cousin of| thioredoxin) (PKC-theta-interacting protein) (PKCq-interacting protein) Length = 335 Score = 52.0 bits (123), Expect = 4e-07 Identities = 22/32 (68%), Positives = 27/32 (84%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGEL 168 YSNWPT+PQLY K EL+GG IV EL+++GEL Sbjct: 296 YSNWPTYPQLYVKGELVGGLDIVKELKENGEL 327 Score = 46.6 bits (109), Expect = 2e-05 Identities = 20/32 (62%), Positives = 24/32 (75%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGEL 168 YS+WPT+PQLY EL+GG I+ ELE S EL Sbjct: 194 YSSWPTYPQLYVSGELIGGLDIIKELEASEEL 225
>TXNL2_RAT (Q9JLZ1) Thioredoxin-like 2 protein (PKC-interacting cousin of| thioredoxin) (PKCq-interacting protein) (PKC-theta-interacting protein) Length = 337 Score = 50.4 bits (119), Expect = 1e-06 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = -3 Query: 266 TYSNWPTFPQLYYKSELMGGXXIVLELEKSGEL 168 TYSNWPT+PQLY EL+GG I+ ELE S EL Sbjct: 195 TYSNWPTYPQLYVSGELIGGLDIIKELEASEEL 227 Score = 49.3 bits (116), Expect = 3e-06 Identities = 20/33 (60%), Positives = 27/33 (81%) Frame = -3 Query: 266 TYSNWPTFPQLYYKSELMGGXXIVLELEKSGEL 168 T+SNWPT+PQLY + +L+GG IV EL+ +GEL Sbjct: 297 TFSNWPTYPQLYVRGDLVGGLDIVKELKDNGEL 329
>TXNL2_MOUSE (Q9CQM9) Thioredoxin-like protein 2 (PKC-interacting cousin of| thioredoxin) (PKC-theta-interacting protein) (PKCq-interacting protein) Length = 337 Score = 50.4 bits (119), Expect = 1e-06 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = -3 Query: 266 TYSNWPTFPQLYYKSELMGGXXIVLELEKSGEL 168 TYSNWPT+PQLY EL+GG I+ ELE S EL Sbjct: 195 TYSNWPTYPQLYVSGELIGGLDIIKELEASEEL 227 Score = 49.3 bits (116), Expect = 3e-06 Identities = 20/33 (60%), Positives = 27/33 (81%) Frame = -3 Query: 266 TYSNWPTFPQLYYKSELMGGXXIVLELEKSGEL 168 T+SNWPT+PQLY + +L+GG IV EL+ +GEL Sbjct: 297 TFSNWPTYPQLYVRGDLVGGLDIVKELKDNGEL 329
>Y187_BUCAI (P57284) Hypothetical monothiol glutaredoxin BU187| Length = 108 Score = 49.3 bits (116), Expect = 3e-06 Identities = 20/33 (60%), Positives = 27/33 (81%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELK 165 Y+NWPTFPQL+ EL+GG I+LE+ ++GELK Sbjct: 64 YANWPTFPQLWIDGELIGGCSIILEMLENGELK 96
>GLRXA_LEGPH (Q48833) Probable monothiol glutaredoxin grlA| Length = 89 Score = 48.9 bits (115), Expect = 3e-06 Identities = 20/38 (52%), Positives = 28/38 (73%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLSE 150 +S+WPTFPQLY K EL+GG I+ E+ + GEL+ L + Sbjct: 48 FSDWPTFPQLYVKGELIGGSDIIAEMFQQGELEPMLRD 85
>YDHD_SHIFL (P0AC72) Probable monothiol glutaredoxin ydhD| Length = 115 Score = 48.5 bits (114), Expect = 4e-06 Identities = 20/38 (52%), Positives = 28/38 (73%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLSE 150 Y+NWPTFPQL+ EL+GG IV+E+ + GEL+ + E Sbjct: 65 YANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE 102
>YDHD_ECOLI (P0AC69) Probable monothiol glutaredoxin ydhD| Length = 115 Score = 48.5 bits (114), Expect = 4e-06 Identities = 20/38 (52%), Positives = 28/38 (73%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLSE 150 Y+NWPTFPQL+ EL+GG IV+E+ + GEL+ + E Sbjct: 65 YANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE 102
>YDHD_ECOL6 (P0AC70) Probable monothiol glutaredoxin ydhD| Length = 115 Score = 48.5 bits (114), Expect = 4e-06 Identities = 20/38 (52%), Positives = 28/38 (73%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLSE 150 Y+NWPTFPQL+ EL+GG IV+E+ + GEL+ + E Sbjct: 65 YANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE 102
>YDHD_ECO57 (P0AC71) Probable monothiol glutaredoxin ydhD| Length = 115 Score = 48.5 bits (114), Expect = 4e-06 Identities = 20/38 (52%), Positives = 28/38 (73%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLSE 150 Y+NWPTFPQL+ EL+GG IV+E+ + GEL+ + E Sbjct: 65 YANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE 102
>GLRX5_SCHPO (O74790) Monothiol glutaredoxin-5| Length = 244 Score = 47.0 bits (110), Expect = 1e-05 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATL 156 +S+WPTFPQLY K E +GG IV E+ ++GEL+ L Sbjct: 207 FSDWPTFPQLYIKGEFVGGLDIVSEMIENGELQEML 242
>Y1846_SYNY3 (P73056) Hypothetical UPF0055 protein slr1846| Length = 107 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/36 (52%), Positives = 26/36 (72%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATL 156 YSNWPT PQ+Y E +GG I++EL ++GEL+ L Sbjct: 66 YSNWPTIPQVYVNGEFVGGSDIMIELYQNGELQEML 101
>GLRXA_RICCN (Q92GH5) Probable monothiol glutaredoxin grlA| Length = 107 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/36 (58%), Positives = 26/36 (72%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATL 156 +S+WPTFPQLY EL+GG I EL +SGEL+ L Sbjct: 67 FSDWPTFPQLYINGELVGGCDIARELYQSGELEKML 102
>GLRX4_SCHPO (Q9HDW8) Monothiol glutaredoxin-4| Length = 146 Score = 45.4 bits (106), Expect = 4e-05 Identities = 19/38 (50%), Positives = 24/38 (63%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLSE 150 +S+WPT PQLY E +GG I+ + KSGEL L E Sbjct: 89 FSDWPTIPQLYINGEFVGGSDILASMHKSGELHKILKE 126
>YCXQ_PORPU (P51384) Hypothetical monothiol glutaredoxin in trpA-ycf12| intergenic region (ORF107) Length = 107 Score = 44.7 bits (104), Expect = 6e-05 Identities = 19/34 (55%), Positives = 25/34 (73%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKA 162 +S+WPT PQLY E +GG I+LEL + GEL+A Sbjct: 66 HSSWPTIPQLYINREFVGGADIMLELFEQGELQA 99
>GLRXA_RICPR (O05957) Probable monothiol glutaredoxin grlA| Length = 107 Score = 43.9 bits (102), Expect = 1e-04 Identities = 19/38 (50%), Positives = 26/38 (68%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLSE 150 +S+WPTFPQLY L+GG I EL ++GEL+ L + Sbjct: 67 FSDWPTFPQLYINGVLVGGCDIAKELYQNGELEKMLKD 104
>GLRX5_HUMAN (Q86SX6) Glutaredoxin-related protein 5| Length = 157 Score = 43.9 bits (102), Expect = 1e-04 Identities = 17/38 (44%), Positives = 26/38 (68%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLSE 150 YSNWPT PQ+Y E +GG I+L++ ++G+L L + Sbjct: 103 YSNWPTIPQVYLNGEFVGGCDILLQMHQNGDLVEELKK 140
>GLRX5_MOUSE (Q80Y14) Glutaredoxin-related protein 5| Length = 152 Score = 43.9 bits (102), Expect = 1e-04 Identities = 17/38 (44%), Positives = 26/38 (68%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLSE 150 YSNWPT PQ+Y E +GG I+L++ ++G+L L + Sbjct: 99 YSNWPTIPQVYLNGEFVGGCDILLQMHQNGDLVEELKK 136
>GLRX5_YEAST (Q02784) Monothiol glutaredoxin-5, mitochondrial precursor| Length = 150 Score = 42.7 bits (99), Expect = 2e-04 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLSE 150 +S WPT PQLY E +GG ++ + +SGEL L E Sbjct: 98 FSEWPTIPQLYVNKEFIGGCDVITSMARSGELADLLEE 135
>GLRX4_YEAST (P32642) Monothiol glutaredoxin-4| Length = 244 Score = 37.0 bits (84), Expect = 0.013 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLE 189 +S+WPTFPQLY E GG I+ E Sbjct: 206 FSDWPTFPQLYINGEFQGGLDIIKE 230
>GLRX3_YEAST (Q03835) Monothiol glutaredoxin-3| Length = 285 Score = 36.6 bits (83), Expect = 0.017 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLE 189 +S WPTFPQLY E GG I+ E Sbjct: 246 FSEWPTFPQLYINGEFQGGLDIIKE 270
>YZ73_CAEEL (Q19297) Hypothetical protein F10D7.3 in chromosome X| Length = 146 Score = 31.6 bits (70), Expect = 0.56 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -3 Query: 263 YSNWPTFPQLYYKSELMGGXXIVLELEKSGELKATLSE*HSI 138 YS T PQL+ + +GG +E+ GEL+ L + H++ Sbjct: 93 YSGRTTVPQLFISGKFVGGHDETKAIEEKGELRPLLEKAHAL 134
>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640| Length = 1069 Score = 28.9 bits (63), Expect = 3.6 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Frame = +3 Query: 132 PTYAMLLRKSGLQLSTLFQ---LENNVXAPHQF*FVVELGEGGPVR 260 P LL SG+QL+ + Q L + P Q VV+ GEGGPVR Sbjct: 387 PCTVDLLSTSGMQLALMVQPLALSHPSEEPIQ---VVDFGEGGPVR 429
>SYK_LYCES (Q43776) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 588 Score = 28.5 bits (62), Expect = 4.7 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 6/80 (7%) Frame = -3 Query: 242 PQLYYKSELMGGXXIVLELEK---SGELKATLSE*HSICRCYMVSYGVSSICPISNCSID 72 P+LY K ++GG V EL K + + T S ++C YM + + ++ + Sbjct: 314 PELYLKKLVVGGFDRVYELGKHFRNEGMDLTHSPEFTMCELYMAYADYNDLMDLTEQLLS 373 Query: 71 GIVMPM---YFIGXHVLNLD 21 G+V + Y I H LD Sbjct: 374 GMVKDLTGSYKIRYHANGLD 393
>UGA4_YEAST (P32837) GABA-specific permease (GABA-specific transport protein)| Length = 571 Score = 28.5 bits (62), Expect = 4.7 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = -1 Query: 214 WGAXTLFSSWKRVES*RPLFRSSIAYVGAIWCLMVFRASVLYRIALLMALL 62 W T+F R+ S R LFR Y+G IW +V V +++ +++ ++ Sbjct: 456 WSTPTVF----RLTSGRDLFRPGPFYLGKIWSPIVAWTGVAFQLFIIILVM 502
>ENP1_PIG (Q9MYU4) Ectonucleoside triphosphate diphosphohydrolase 1 (EC| 3.6.1.5) (NTPDase1) (Ecto-ATP diphosphohydrolase) (ATPDase) (Lymphoid cell activation antigen) (Ecto-apyrase) (CD39 antigen) [Contains: Ectonucleoside triphosphate diphosphohydrolase Length = 510 Score = 28.1 bits (61), Expect = 6.1 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = -3 Query: 107 SSICPISNCSIDGIVMPM 54 +S CP S CS DG+ +P+ Sbjct: 334 TSYCPYSRCSFDGVFLPL 351
>ENP1_BOVIN (O18956) Ectonucleoside triphosphate diphosphohydrolase 1 (EC| 3.6.1.5) (NTPDase1) (Ecto-ATP diphosphohydrolase) (ATPDase) (Lymphoid cell activation antigen) (CD39 antigen) (Ecto-apyrase) Length = 513 Score = 28.1 bits (61), Expect = 6.1 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -3 Query: 137 CRCYMVSYGVSSICPISNCSIDGIVMP 57 CR ++ +S CP S+CS +G+ +P Sbjct: 327 CRQSIIQLFNTSYCPYSSCSFNGVFLP 353
>MURF_BUCAI (P57315) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase| (EC 6.3.2.10) (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme) Length = 455 Score = 27.7 bits (60), Expect = 8.0 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 9/47 (19%) Frame = +3 Query: 141 AMLLRKSGLQLSTLFQLENNVXAP---------HQF*FVVELGEGGP 254 A +LRK+G +ST+ L NN+ P H++ V+ELG P Sbjct: 119 ASILRKNGNTISTIDNLNNNIGVPMTLLQLKQEHKY-GVIELGASKP 164 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,425,805 Number of Sequences: 219361 Number of extensions: 674607 Number of successful extensions: 1791 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1765 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1791 length of database: 80,573,946 effective HSP length: 64 effective length of database: 66,534,842 effective search space used: 1596836208 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
