ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal40h24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate al... 174 1e-40
2gb|AY103557.1| Zea mays PCO070710 mRNA sequence 135 1e-28
3gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
5dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
6dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
8dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolas... 131 2e-27
9gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds 115 1e-22
10dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 7e-21
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
13emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007... 107 3e-20
14gb|AF467803.1| Hevea brasiliensis latex plastidic aldolase-like ... 50 0.005
15gb|AF537127.1| Camellia sinensis beta-1,3-glucosidase-like mRNA,... 46 0.081
16gb|AY106811.1| Zea mays PCO109530 mRNA sequence 44 0.32
17ref|NM_126176.2| Arabidopsis thaliana fructose-bisphosphate aldo... 42 1.3
18gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map... 42 1.3
19gb|AF325014.2|AF325014 Arabidopsis thaliana At2g01140 (At2g01140... 42 1.3
20emb|BX820093.1|CNS0A9H9 Arabidopsis thaliana Full-length cDNA Co... 42 1.3
21emb|BX821886.1|CNS0A9AM Arabidopsis thaliana Full-length cDNA Co... 42 1.3
22emb|BX820040.1|CNS0A9FV Arabidopsis thaliana Full-length cDNA Co... 42 1.3
23emb|BX819026.1|CNS0A82R Arabidopsis thaliana Full-length cDNA Co... 42 1.3
24gb|AY086203.1| Arabidopsis thaliana clone 22418 mRNA, complete s... 42 1.3
25gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H... 40 5.0
26gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 5.0
27emb|CR559941.5| Zebrafish DNA sequence from clone DKEY-161O1 in ... 40 5.0
28ref|NM_173273.1| Danio rerio digestive-organ expansion factor (d... 40 5.0
29gb|AF506211.1| Danio rerio DJ434O14.5-like protein mRNA, complet... 40 5.0
30gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.0
31gb|BC058062.1| Danio rerio digestive-organ expansion factor, mRN... 40 5.0 
>gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1577

 Score =  174 bits (88), Expect = 1e-40
 Identities = 103/108 (95%)
 Strand = Plus / Minus

                                                                        
Query: 270  gatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcg 329
            ||||||||||||||||||||||||||||||  ||| ||||| || |||||||||||||||
Sbjct: 1267 gatcagtagctgtagttcttgacgaacatgccctccttggcggccgcggcctcgccgtcg 1208

                                                            
Query: 330  ctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagc 377
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 ctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagc 1160



 Score =  153 bits (77), Expect = 5e-34
 Identities = 97/101 (96%), Gaps = 2/101 (1%)
 Strand = Plus / Minus

                                                                        
Query: 129  gtccatctcttccatcagagctggtctcgacctgtaa-caacgacgacacactggctggc 187
            |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| |||||
Sbjct: 1400 gtccatctct-ccatcagagctggtctcgacctgtaaacaacgaggacacactgcctggc 1342

                                                     
Query: 188  taaggtgccctcaagctgctcaaggcgctactagcactctc 228
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 taaggtgccctcaagctgctcaaggcgctactagcactctc 1301
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>gb|AY103557.1| Zea mays PCO070710 mRNA sequence
          Length = 1761

 Score =  135 bits (68), Expect = 1e-28
 Identities = 95/104 (91%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgctgg 333
            |||||||||||||||||||||||||   ||| |||||  | |||||||||||||||  ||
Sbjct: 1404 agtagctgtagttcttgacgaacattccctccttggcctcggcggcctcgccgtcggagg 1345

                                                        
Query: 334  tgtacttgccgagctgcgccagggagttggccttggcgcgcagc 377
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 tgtacttgccgagctgcgccagggagttggccttggcgcgcagc 1301
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>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                         
Query: 268   cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 327
             ||||| |||||  |||||||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 63349 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 63408

                                                           
Query: 328   cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 373
             |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 63409 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 63454
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                           
Query: 268     cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 327
               ||||| |||||  |||||||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 3469394 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 3469453

                                                             
Query: 328     cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 373
               |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3469454 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 3469499
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>dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C04, full
            insert sequence
          Length = 1492

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                        
Query: 268  cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 327
            ||||| |||||  |||||||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 1265 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 1206

                                                          
Query: 328  cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 373
            |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1205 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 1160
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>dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O18, full
            insert sequence
          Length = 1622

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                        
Query: 268  cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 327
            ||||| |||||  |||||||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 1261 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 1202

                                                          
Query: 328  cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 373
            |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1201 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 1156
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                           
Query: 268     cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 327
               ||||| |||||  |||||||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 3478098 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 3478157

                                                             
Query: 328     cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 373
               |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3478158 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 3478203
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>dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolase, complete cds, clone:Aldp
          Length = 2915

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                        
Query: 268  cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 327
            ||||| |||||  |||||||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 2793 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 2734

                                                          
Query: 328  cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 373
            |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2733 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 2688
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>gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds
          Length = 1302

 Score =  115 bits (58), Expect = 1e-22
 Identities = 94/106 (88%)
 Strand = Plus / Minus

                                                                        
Query: 268  cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 327
            ||||| |||||  |||||||||||||||||||   || |||||  | ||||| |||||||
Sbjct: 1157 cggattagtagacgtagttcttgacgaacatgccttccttggcctcggcggcttcgccgt 1098

                                                          
Query: 328  cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 373
            |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1097 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 1052
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>dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A10, full
            insert sequence
          Length = 2135

 Score =  109 bits (55), Expect = 7e-21
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                       
Query: 315  gcggcctcgccgtcgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 373
            ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1209 gcggcctcgccgtcgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 1151
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  107 bits (54), Expect = 3e-20
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                           
Query: 272     tcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgct 331
               ||||||| ||||||||||||||||||||  |||  ||||  | |||||||||||||||||
Sbjct: 3543513 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgct 3543454

                                             
Query: 332     ggtgtacttgccgagctgcgccagggagtt 361
               |||||||||||||||||||||||| |||||
Sbjct: 3543453 ggtgtacttgccgagctgcgccagcgagtt 3543424
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  107 bits (54), Expect = 3e-20
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                           
Query: 272     tcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgct 331
               ||||||| ||||||||||||||||||||  |||  ||||  | |||||||||||||||||
Sbjct: 3543458 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgct 3543399

                                             
Query: 332     ggtgtacttgccgagctgcgccagggagtt 361
               |||||||||||||||||||||||| |||||
Sbjct: 3543398 ggtgtacttgccgagctgcgccagcgagtt 3543369
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>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103647

 Score =  107 bits (54), Expect = 3e-20
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                         
Query: 272   tcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgct 331
             ||||||| ||||||||||||||||||||  |||  ||||  | |||||||||||||||||
Sbjct: 58441 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgct 58382

                                           
Query: 332   ggtgtacttgccgagctgcgccagggagtt 361
             |||||||||||||||||||||||| |||||
Sbjct: 58381 ggtgtacttgccgagctgcgccagcgagtt 58352
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>gb|AF467803.1| Hevea brasiliensis latex plastidic aldolase-like protein mRNA,
            complete cds
          Length = 1552

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 333  gtgtacttgccgagctgcgccagggagttggccttggcgcg 373
            ||||||||||| ||||| || || |||||||||||||||||
Sbjct: 1260 gtgtacttgccaagctgagcaagtgagttggccttggcgcg 1220
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>gb|AF537127.1| Camellia sinensis beta-1,3-glucosidase-like mRNA, partial sequence
          Length = 584

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 332 ggtgtacttgccgagctgcgccagggagttggccttggc 370
           ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 305 ggtgtacttgccgagttgagccagagagttggcgttggc 267
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>gb|AY106811.1| Zea mays PCO109530 mRNA sequence
          Length = 1545

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 342  ccgagctgcgccagggagttggccttggcgcgca 375
            |||||||| ||||| ||||||||||| |||||||
Sbjct: 1174 ccgagctgggccagcgagttggcctttgcgcgca 1141
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>ref|NM_126176.2| Arabidopsis thaliana fructose-bisphosphate aldolase AT2G01140 mRNA,
            complete cds
          Length = 1515

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 339  ttgccgagctgcgccagggagttggcctt 367
            ||||||||||| ||||| |||||||||||
Sbjct: 1253 ttgccgagctgggccagtgagttggcctt 1225
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>gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete
            sequence
          Length = 94029

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 339  ttgccgagctgcgccagggagttggcctt 367
            ||||||||||| ||||| |||||||||||
Sbjct: 4669 ttgccgagctgggccagtgagttggcctt 4697
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>gb|AF325014.2|AF325014 Arabidopsis thaliana At2g01140 (At2g01140/F10A8.2) mRNA, complete cds
          Length = 1470

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 339  ttgccgagctgcgccagggagttggcctt 367
            ||||||||||| ||||| |||||||||||
Sbjct: 1207 ttgccgagctgggccagtgagttggcctt 1179
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>emb|BX820093.1|CNS0A9H9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS72ZH02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1377

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 339  ttgccgagctgcgccagggagttggcctt 367
            ||||||||||| ||||| |||||||||||
Sbjct: 1195 ttgccgagctgggccagtgagttggcctt 1167
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>emb|BX821886.1|CNS0A9AM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL81ZH02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 329

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 339 ttgccgagctgcgccagggagttggcctt 367
           ||||||||||| ||||| |||||||||||
Sbjct: 88  ttgccgagctgggccagtgagttggcctt 60
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>emb|BX820040.1|CNS0A9FV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS67ZB05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1391

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 339  ttgccgagctgcgccagggagttggcctt 367
            ||||||||||| ||||| |||||||||||
Sbjct: 1187 ttgccgagctgggccagtgagttggcctt 1159
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>emb|BX819026.1|CNS0A82R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB38ZH11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 262

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 339 ttgccgagctgcgccagggagttggcctt 367
           ||||||||||| ||||| |||||||||||
Sbjct: 37  ttgccgagctgggccagtgagttggcctt 9
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>gb|AY086203.1| Arabidopsis thaliana clone 22418 mRNA, complete sequence
          Length = 1469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 339  ttgccgagctgcgccagggagttggcctt 367
            ||||||||||| ||||| |||||||||||
Sbjct: 1207 ttgccgagctgggccagtgagttggcctt 1179
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>gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H14, complete sequence
          Length = 118437

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   acatgttctctttggcagct 314
             ||||||||||||||||||||
Sbjct: 27603 acatgttctctttggcagct 27584
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>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    acatgttctctttggcagct 314
              ||||||||||||||||||||
Sbjct: 323939 acatgttctctttggcagct 323958
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>emb|CR559941.5| Zebrafish DNA sequence from clone DKEY-161O1 in linkage group 13,
             complete sequence
          Length = 89710

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    gcagtaaaaccattccaaag 88
             ||||||||||||||||||||
Sbjct: 12372 gcagtaaaaccattccaaag 12353
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>ref|NM_173273.1| Danio rerio digestive-organ expansion factor (def), mRNA
          Length = 2445

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   gcagtaaaaccattccaaag 88
            ||||||||||||||||||||
Sbjct: 1694 gcagtaaaaccattccaaag 1713
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>gb|AF506211.1| Danio rerio DJ434O14.5-like protein mRNA, complete cds
          Length = 2445

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   gcagtaaaaccattccaaag 88
            ||||||||||||||||||||
Sbjct: 1694 gcagtaaaaccattccaaag 1713
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 193     tgccctcaagctgctcaagg 212
               ||||||||||||||||||||
Sbjct: 2164719 tgccctcaagctgctcaagg 2164738
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>gb|BC058062.1| Danio rerio digestive-organ expansion factor, mRNA (cDNA clone
            MGC:63753 IMAGE:2640310), complete cds
          Length = 2466

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   gcagtaaaaccattccaaag 88
            ||||||||||||||||||||
Sbjct: 1673 gcagtaaaaccattccaaag 1692


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,336,282
Number of Sequences: 3902068
Number of extensions: 2336282
Number of successful extensions: 53560
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53421
Number of HSP's gapped (non-prelim): 133
length of query: 377
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 355
effective length of database: 17,147,199,772
effective search space: 6087255919060
effective search space used: 6087255919060
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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