ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal40f15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
2dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
3dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
4dbj|AK103241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
5gb|BT016628.1| Zea mays clone Contig461 mRNA sequence 66 2e-07
6gb|AY112411.1| Zea mays CL7793_1 mRNA sequence 66 2e-07
7gb|AY105467.1| Zea mays PCO093441 mRNA sequence 66 2e-07
8ref|XM_481816.1| Oryza sativa (japonica cultivar-group), mRNA 58 4e-05
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
10dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
11dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
12gb|AC166055.5| Mus musculus BAC clone RP23-462B19 from chromosom... 44 0.58
13emb|AL138822.13| Human DNA sequence from clone RP11-57H24 on chr... 44 0.58
14gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; ... 44 0.58
15gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell... 44 0.58
16ref|NM_078544.2| Drosophila melanogaster lozenge CG1689-RA (lz),... 44 0.58
17gb|AC157477.2| Mus musculus BAC clone RP24-141A7 from chromosome... 44 0.58
18gb|AC158646.2| Mus musculus 10 BAC RP23-471J13 (Roswell Park Can... 44 0.58
19gb|U47849.2|DMU47849 Drosophila melanogaster Lozenge (lz) mRNA, ... 44 0.58
20gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 ... 44 0.58
21gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 42 2.3
22gb|AY705797.1| Pinus halepensis clone 11r mRNA sequence 42 2.3
23gb|AC006467.13| Drosophila melanogaster clone BACR03L08, complet... 42 2.3
24gb|AC150553.1| Drosophila melanogaster clone BACR09H20, complete... 42 2.3
25emb|AL513443.1|NC93G11 Neurospora crassa DNA linkage group V Cos... 42 2.3
26gb|AE003781.5| Drosophila melanogaster chromosome 2L, section 80... 42 2.3
27gb|AY662627.1| Crenadactylus ocellatus recombination activating ... 40 9.0
28gb|AC164958.3| Mus musculus BAC clone RP23-359G24 from chromosom... 40 9.0
29gb|AC129200.4| Mus musculus BAC clone RP24-221J22 from chromosom... 40 9.0
30gb|AC112151.3| Mus musculus BAC clone RP24-86M8 from 2, complete... 40 9.0
31gb|AC145164.11| Medicago truncatula clone mth2-27j21, complete s... 40 9.0
32gb|AC137668.18| Medicago truncatula clone mth2-5f8, complete seq... 40 9.0
33emb|AL050341.18|HSDJ39G22 Human DNA sequence from clone RP1-39G2... 40 9.0
34emb|AL031680.20|HS850H21 Human DNA sequence from clone RP5-850H2... 40 9.0
35gb|AC105074.5| Homo sapiens chromosome 18, clone RP11-693M3, com... 40 9.0
36gb|AC114485.2| Homo sapiens chromosome 1 clone RP11-202K23, comp... 40 9.0
37gb|AC034206.4| Homo sapiens chromosome 5 clone CTC-321K16, compl... 40 9.0
38dbj|AK054247.1| Mus musculus 2 days pregnant adult female ovary ... 40 9.0
39gb|AC141889.4| Mus musculus BAC clone RP23-434P15 from chromosom... 40 9.0
40emb|AL935170.11| Mouse DNA sequence from clone RP23-480P16 on ch... 40 9.0
41emb|AL935312.10| Mouse DNA sequence from clone RP23-56A7 on chro... 40 9.0
42gb|AC005738.1|AC005738 Homo sapiens chromosome 5, BAC clone 7g12... 40 9.0
43gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome... 40 9.0 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  125 bits (63), Expect = 2e-25
 Identities = 165/199 (82%)
 Strand = Plus / Minus

                                                                           
Query: 463     caccctgagatgcagattcagatgtgggtgcaggagtcgagggatctgtcctctcagagt 522
               |||| |||| || |||||||||||| ||||||||||||||||| || || || || || |
Sbjct: 7278406 caccttgagttggagattcagatgtaggtgcaggagtcgaggggtcagttctttcggaat 7278347

                                                                           
Query: 523     cagggaactgatcgctcgacgctgtgacagtagctcctgcaccaggtgtttcagacttta 582
               |||||||||||||||| | |  |||||| | ||| || ||| ||||||||||||| || |
Sbjct: 7278346 cagggaactgatcgcttggcaatgtgacggaagcaccagcagcaggtgtttcagatttca 7278287

                                                                           
Query: 583     taccaccgaaacgctgttgctcttctatgattttcttaaggtactttccctgtgcctcga 642
                 ||||||| |||||| ||||| || ||||| ||||| |||||||| ||||| ||||| |
Sbjct: 7278286 ctccaccgagacgctgctgctcctcaatgatcttcttgaggtacttgccctgcgcctcaa 7278227

                                  
Query: 643     ttcgcagctgcagctgcct 661
               | |||| ||||||||||||
Sbjct: 7278226 tgcgcaactgcagctgcct 7278208



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                           
Query: 321     tgcctctttgctgccctctcgtgcttcggactgagagtaggagaaccgggatgacagttg 380
               |||||||||||||||||||| ||||| |||||    ||||||||||| || |||||||||
Sbjct: 7278563 tgcctctttgctgccctctcatgctttggactagcggtaggagaaccaggctgacagttg 7278504

                    
Query: 381     gaatc 385
               |||||
Sbjct: 7278503 gaatc 7278499
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>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0062A09
          Length = 173541

 Score =  125 bits (63), Expect = 2e-25
 Identities = 165/199 (82%)
 Strand = Plus / Minus

                                                                         
Query: 463   caccctgagatgcagattcagatgtgggtgcaggagtcgagggatctgtcctctcagagt 522
             |||| |||| || |||||||||||| ||||||||||||||||| || || || || || |
Sbjct: 12369 caccttgagttggagattcagatgtaggtgcaggagtcgaggggtcagttctttcggaat 12310

                                                                         
Query: 523   cagggaactgatcgctcgacgctgtgacagtagctcctgcaccaggtgtttcagacttta 582
             |||||||||||||||| | |  |||||| | ||| || ||| ||||||||||||| || |
Sbjct: 12309 cagggaactgatcgcttggcaatgtgacggaagcaccagcagcaggtgtttcagatttca 12250

                                                                         
Query: 583   taccaccgaaacgctgttgctcttctatgattttcttaaggtactttccctgtgcctcga 642
               ||||||| |||||| ||||| || ||||| ||||| |||||||| ||||| ||||| |
Sbjct: 12249 ctccaccgagacgctgctgctcctcaatgatcttcttgaggtacttgccctgcgcctcaa 12190

                                
Query: 643   ttcgcagctgcagctgcct 661
             | |||| ||||||||||||
Sbjct: 12189 tgcgcaactgcagctgcct 12171



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                         
Query: 321   tgcctctttgctgccctctcgtgcttcggactgagagtaggagaaccgggatgacagttg 380
             |||||||||||||||||||| ||||| |||||    ||||||||||| || |||||||||
Sbjct: 12526 tgcctctttgctgccctctcatgctttggactagcggtaggagaaccaggctgacagttg 12467

                  
Query: 381   gaatc 385
             |||||
Sbjct: 12466 gaatc 12462
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>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1381_H04
          Length = 130961

 Score =  125 bits (63), Expect = 2e-25
 Identities = 165/199 (82%)
 Strand = Plus / Minus

                                                                          
Query: 463    caccctgagatgcagattcagatgtgggtgcaggagtcgagggatctgtcctctcagagt 522
              |||| |||| || |||||||||||| ||||||||||||||||| || || || || || |
Sbjct: 130511 caccttgagttggagattcagatgtaggtgcaggagtcgaggggtcagttctttcggaat 130452

                                                                          
Query: 523    cagggaactgatcgctcgacgctgtgacagtagctcctgcaccaggtgtttcagacttta 582
              |||||||||||||||| | |  |||||| | ||| || ||| ||||||||||||| || |
Sbjct: 130451 cagggaactgatcgcttggcaatgtgacggaagcaccagcagcaggtgtttcagatttca 130392

                                                                          
Query: 583    taccaccgaaacgctgttgctcttctatgattttcttaaggtactttccctgtgcctcga 642
                ||||||| |||||| ||||| || ||||| ||||| |||||||| ||||| ||||| |
Sbjct: 130391 ctccaccgagacgctgctgctcctcaatgatcttcttgaggtacttgccctgcgcctcaa 130332

                                 
Query: 643    ttcgcagctgcagctgcct 661
              | |||| ||||||||||||
Sbjct: 130331 tgcgcaactgcagctgcct 130313



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                          
Query: 321    tgcctctttgctgccctctcgtgcttcggactgagagtaggagaaccgggatgacagttg 380
              |||||||||||||||||||| ||||| |||||    ||||||||||| || |||||||||
Sbjct: 130668 tgcctctttgctgccctctcatgctttggactagcggtaggagaaccaggctgacagttg 130609

                   
Query: 381    gaatc 385
              |||||
Sbjct: 130608 gaatc 130604
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>dbj|AK103241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123H06, full
           insert sequence
          Length = 1603

 Score =  125 bits (63), Expect = 2e-25
 Identities = 165/199 (82%)
 Strand = Plus / Minus

                                                                       
Query: 463 caccctgagatgcagattcagatgtgggtgcaggagtcgagggatctgtcctctcagagt 522
           |||| |||| || |||||||||||| ||||||||||||||||| || || || || || |
Sbjct: 908 caccttgagttggagattcagatgtaggtgcaggagtcgaggggtcagttctttcggaat 849

                                                                       
Query: 523 cagggaactgatcgctcgacgctgtgacagtagctcctgcaccaggtgtttcagacttta 582
           |||||||||||||||| | |  |||||| | ||| || ||| ||||||||||||| || |
Sbjct: 848 cagggaactgatcgcttggcaatgtgacggaagcaccagcagcaggtgtttcagatttca 789

                                                                       
Query: 583 taccaccgaaacgctgttgctcttctatgattttcttaaggtactttccctgtgcctcga 642
             ||||||| |||||| ||||| || ||||| ||||| |||||||| ||||| ||||| |
Sbjct: 788 ctccaccgagacgctgctgctcctcaatgatcttcttgaggtacttgccctgcgcctcaa 729

                              
Query: 643 ttcgcagctgcagctgcct 661
           | |||| ||||||||||||
Sbjct: 728 tgcgcaactgcagctgcct 710



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 321  tgcctctttgctgccctctcgtgcttcggactgagagtaggagaaccgggatgacagttg 380
            |||||||||||||||||||| ||||| |||||    ||||||||||| || |||||||||
Sbjct: 1065 tgcctctttgctgccctctcatgctttggactagcggtaggagaaccaggctgacagttg 1006

                 
Query: 381  gaatc 385
            |||||
Sbjct: 1005 gaatc 1001
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>gb|BT016628.1| Zea mays clone Contig461 mRNA sequence
          Length = 1580

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 138/173 (79%)
 Strand = Plus / Minus

                                                                       
Query: 489 ggtgcaggagtcgagggatctgtcctctcagagtcagggaactgatcgctcgacgctgtg 548
           |||||||| || ||||| || |||| ||| ||||| ||||| ||||| || ||  | |||
Sbjct: 861 ggtgcaggtgtggagggctcagtccgctccgagtctgggaattgatcacttgatacagtg 802

                                                                       
Query: 549 acagtagctcctgcaccaggtgtttcagactttataccaccgaaacgctgttgctcttct 608
           |||| ||| ||| || |||| |||||||| || | |||    || ||||| |||||||| 
Sbjct: 801 acagaagcacctccagcaggagtttcagatttcacacctgttaagcgctgctgctcttcg 742

                                                                
Query: 609 atgattttcttaaggtactttccctgtgcctcgattcgcagctgcagctgcct 661
           ||||| ||||  |||||||||||||| ||||| ||||| | ||||||||||||
Sbjct: 741 atgatcttctggaggtactttccctgagcctcaattcgtaactgcagctgcct 689
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>gb|AY112411.1| Zea mays CL7793_1 mRNA sequence
          Length = 1079

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 138/173 (79%)
 Strand = Plus / Minus

                                                                       
Query: 489 ggtgcaggagtcgagggatctgtcctctcagagtcagggaactgatcgctcgacgctgtg 548
           |||||||| || ||||| || |||| ||| ||||| ||||| ||||| || ||  | |||
Sbjct: 384 ggtgcaggtgtggagggctcagtccgctccgagtctgggaattgatcacttgatacagtg 325

                                                                       
Query: 549 acagtagctcctgcaccaggtgtttcagactttataccaccgaaacgctgttgctcttct 608
           |||| ||| ||| || |||| |||||||| || | |||    || ||||| |||||||| 
Sbjct: 324 acagaagcacctccagcaggagtttcagatttcacacctgttaagcgctgctgctcttcg 265

                                                                
Query: 609 atgattttcttaaggtactttccctgtgcctcgattcgcagctgcagctgcct 661
           ||||| ||||  |||||||||||||| ||||| ||||| | ||||||||||||
Sbjct: 264 atgatcttctggaggtactttccctgagcctcaattcgtaactgcagctgcct 212
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>gb|AY105467.1| Zea mays PCO093441 mRNA sequence
          Length = 1264

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 138/173 (79%)
 Strand = Plus / Minus

                                                                       
Query: 489 ggtgcaggagtcgagggatctgtcctctcagagtcagggaactgatcgctcgacgctgtg 548
           |||||||| || ||||| || |||| ||| ||||| ||||| ||||| || ||  | |||
Sbjct: 932 ggtgcaggtgtggagggctcagtccgctccgagtctgggaattgatcacttgatacagtg 873

                                                                       
Query: 549 acagtagctcctgcaccaggtgtttcagactttataccaccgaaacgctgttgctcttct 608
           |||| ||| ||| || |||| |||||||| || | |||    || ||||| |||||||| 
Sbjct: 872 acagaagcacctccagcaggagtttcagatttcacacctgttaagcgctgctgctcttcg 813

                                                                
Query: 609 atgattttcttaaggtactttccctgtgcctcgattcgcagctgcagctgcct 661
           ||||| ||||  |||||||||||||| ||||| ||||| | ||||||||||||
Sbjct: 812 atgatcttctggaggtactttccctgagcctcaattcgtaactgcagctgcct 760
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>ref|XM_481816.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 924

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                       
Query: 593 acgctgttgctcttctatgattttcttaaggtactttccctgtgcctcgattcgcagctg 652
           |||||| |||||||| ||||| ||||  || ||||| ||||| ||||| |||||||||||
Sbjct: 531 acgctgctgctcttcgatgatcttctggagatacttcccctgcgcctcaattcgcagctg 472

                    
Query: 653 cagctgcct 661
            ||||||||
Sbjct: 471 tagctgcct 463
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                            
Query: 593      acgctgttgctcttctatgattttcttaaggtactttccctgtgcctcgattcgcagctg 652
                |||||| |||||||| ||||| ||||  || ||||| ||||| ||||| |||||||||||
Sbjct: 15708483 acgctgctgctcttcgatgatcttctggagatacttcccctgcgcctcaattcgcagctg 15708424

                         
Query: 653      cagctgcct 661
                 ||||||||
Sbjct: 15708423 tagctgcct 15708415
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>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0404D10
          Length = 155069

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                         
Query: 593   acgctgttgctcttctatgattttcttaaggtactttccctgtgcctcgattcgcagctg 652
             |||||| |||||||| ||||| ||||  || ||||| ||||| ||||| |||||||||||
Sbjct: 22939 acgctgctgctcttcgatgatcttctggagatacttcccctgcgcctcaattcgcagctg 22880

                      
Query: 653   cagctgcct 661
              ||||||||
Sbjct: 22879 tagctgcct 22871
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>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0410E11
          Length = 150200

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                          
Query: 593    acgctgttgctcttctatgattttcttaaggtactttccctgtgcctcgattcgcagctg 652
              |||||| |||||||| ||||| ||||  || ||||| ||||| ||||| |||||||||||
Sbjct: 142638 acgctgctgctcttcgatgatcttctggagatacttcccctgcgcctcaattcgcagctg 142579

                       
Query: 653    cagctgcct 661
               ||||||||
Sbjct: 142578 tagctgcct 142570
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>gb|AC166055.5| Mus musculus BAC clone RP23-462B19 from chromosome 9, complete sequence
          Length = 180798

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 603   tcttctatgattttcttaaggt 624
             ||||||||||||||||||||||
Sbjct: 18586 tcttctatgattttcttaaggt 18607
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>emb|AL138822.13| Human DNA sequence from clone RP11-57H24 on chromosome 13 Contains a
             Eukaryotic initiation factor 4A (eIF4a) pseudogene,
             complete sequence
          Length = 126502

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 83    aagtatgcatcatgtaaacaac 104
             ||||||||||||||||||||||
Sbjct: 40917 aagtatgcatcatgtaaacaac 40938
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>gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; lozenge (lz) and c12.1
             genes, complete cds; and c12.2 gene, partial cds
          Length = 45142

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 475   cagattcagatgtgggtgcagg 496
             ||||||||||||||||||||||
Sbjct: 25681 cagattcagatgtgggtgcagg 25660
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>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184334

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 475   cagattcagatgtgggtgcagg 496
             ||||||||||||||||||||||
Sbjct: 69814 cagattcagatgtgggtgcagg 69835
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>ref|NM_078544.2| Drosophila melanogaster lozenge CG1689-RA (lz), mRNA
          Length = 3469

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 475  cagattcagatgtgggtgcagg 496
            ||||||||||||||||||||||
Sbjct: 2766 cagattcagatgtgggtgcagg 2745
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>gb|AC157477.2| Mus musculus BAC clone RP24-141A7 from chromosome 9, complete sequence
          Length = 163557

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 603   tcttctatgattttcttaaggt 624
             ||||||||||||||||||||||
Sbjct: 86952 tcttctatgattttcttaaggt 86931
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>gb|AC158646.2| Mus musculus 10 BAC RP23-471J13 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 167591

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 112   aaacacctaacaatttatgtca 133
             ||||||||||||||||||||||
Sbjct: 30870 aaacacctaacaatttatgtca 30891
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>gb|U47849.2|DMU47849 Drosophila melanogaster Lozenge (lz) mRNA, complete cds
          Length = 3471

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 475  cagattcagatgtgggtgcagg 496
            ||||||||||||||||||||||
Sbjct: 2776 cagattcagatgtgggtgcagg 2755
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>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete
              sequence
          Length = 290970

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 475    cagattcagatgtgggtgcagg 496
              ||||||||||||||||||||||
Sbjct: 253907 cagattcagatgtgggtgcagg 253886
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>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   cctccgggaactcggcgtcgc 312
             |||||||||||||||||||||
Sbjct: 13297 cctccgggaactcggcgtcgc 13317
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>gb|AY705797.1| Pinus halepensis clone 11r mRNA sequence
          Length = 1262

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 596 ctgttgctcttctatgattttcttaaggtactttccctgtgcctc 640
           |||||| ||||||| ||| |||| ||  |||||||||||||||||
Sbjct: 621 ctgttgttcttctaagatcttctgaaaatactttccctgtgcctc 577
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>gb|AC006467.13| Drosophila melanogaster clone BACR03L08, complete sequence
          Length = 170327

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 324   ctctttgctgccctctcgtgc 344
             |||||||||||||||||||||
Sbjct: 96287 ctctttgctgccctctcgtgc 96307
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>gb|AC150553.1| Drosophila melanogaster clone BACR09H20, complete sequence
          Length = 179099

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 324    ctctttgctgccctctcgtgc 344
              |||||||||||||||||||||
Sbjct: 144162 ctctttgctgccctctcgtgc 144182
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>emb|AL513443.1|NC93G11 Neurospora crassa DNA linkage group V Cosmid contig 93G11
          Length = 86075

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    actcatctgccataaggttac 41
             |||||||||||||||||||||
Sbjct: 83446 actcatctgccataaggttac 83466
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>gb|AE003781.5| Drosophila melanogaster chromosome 2L, section 80 of 83 of the complete
              sequence
          Length = 323775

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 324    ctctttgctgccctctcgtgc 344
              |||||||||||||||||||||
Sbjct: 310537 ctctttgctgccctctcgtgc 310557
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>gb|AY662627.1| Crenadactylus ocellatus recombination activating gene 1 (RAG-1) gene,
            partial cds
          Length = 2834

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 437  gcttccactgtctcttttga 456
            ||||||||||||||||||||
Sbjct: 2514 gcttccactgtctcttttga 2495
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>gb|AC164958.3| Mus musculus BAC clone RP23-359G24 from chromosome 3, complete sequence
          Length = 230133

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 435   tggcttccactgtctcttttgaaa 458
             ||||||||||||||||| ||||||
Sbjct: 30807 tggcttccactgtctctgttgaaa 30830
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>gb|AC129200.4| Mus musculus BAC clone RP24-221J22 from chromosome 2, complete sequence
          Length = 168365

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 433    tctggcttccactgtctcttttga 456
              |||||||||||||| |||||||||
Sbjct: 101595 tctggcttccactggctcttttga 101618
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>gb|AC112151.3| Mus musculus BAC clone RP24-86M8 from 2, complete sequence
          Length = 216515

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 433    tctggcttccactgtctcttttga 456
              |||||||||||||| |||||||||
Sbjct: 196663 tctggcttccactggctcttttga 196640
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>gb|AC145164.11| Medicago truncatula clone mth2-27j21, complete sequence
          Length = 110295

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   acctaacaatttatgtcaac 135
             ||||||||||||||||||||
Sbjct: 25302 acctaacaatttatgtcaac 25283
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>gb|AC137668.18| Medicago truncatula clone mth2-5f8, complete sequence
          Length = 133085

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    acctaacaatttatgtcaac 135
              ||||||||||||||||||||
Sbjct: 121784 acctaacaatttatgtcaac 121765
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>emb|AL050341.18|HSDJ39G22 Human DNA sequence from clone RP1-39G22 on chromosome 1p32.1-34.3
             Contains the 3' end of the RLF gene for rearranged L-myc
             fusion sequence, the gene for a novel protein, the
             ZMPSTE24 gene for zinc metalloproteinase (STE24 homolog,
             yeast), a pseudogene similar to part of RIO kinase 2
             (yeast) (RIOK2), the COL9A2 gene for collagen, type IX,
             alpha 2 and a CpG island, complete sequence
          Length = 101685

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   gactcttgattgcttcggtc 434
             ||||||||||||||||||||
Sbjct: 32815 gactcttgattgcttcggtc 32834
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>emb|AL031680.20|HS850H21 Human DNA sequence from clone RP5-850H21 on chromosome 20q13.11-13.2
             Contains the 5' end of the BCAS4 gene for breast carcinoma
             amplified sequence 4, the PARD6B gene for par-6
             partitioning defective 6 homolog beta (C. elegans) and two
             CpG islands, complete sequence
          Length = 117431

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 445   tgtctcttttgaaagctgca 464
             ||||||||||||||||||||
Sbjct: 99932 tgtctcttttgaaagctgca 99951
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>gb|AC105074.5| Homo sapiens chromosome 18, clone RP11-693M3, complete sequence
          Length = 118724

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 472   atgcagattcagatgtgggtgcag 495
             |||||||||||| |||||||||||
Sbjct: 54889 atgcagattcaggtgtgggtgcag 54866
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>gb|AC114485.2| Homo sapiens chromosome 1 clone RP11-202K23, complete sequence
          Length = 140621

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  atttatgtcaacatacaaca 143
            ||||||||||||||||||||
Sbjct: 2610 atttatgtcaacatacaaca 2629
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>gb|AC034206.4| Homo sapiens chromosome 5 clone CTC-321K16, complete sequence
          Length = 108123

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 322   gcctctttgctgccctctcgtgct 345
             |||||||||||||||||| |||||
Sbjct: 16044 gcctctttgctgccctctggtgct 16067
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>dbj|AK054247.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
           full-length enriched library, clone:E330002O13
           product:unclassifiable, full insert sequence
          Length = 780

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 435 tggcttccactgtctcttttgaaa 458
           ||||||||||||||||| ||||||
Sbjct: 469 tggcttccactgtctctgttgaaa 446
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>gb|AC141889.4| Mus musculus BAC clone RP23-434P15 from chromosome 3, complete sequence
          Length = 186264

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 435   tggcttccactgtctcttttgaaa 458
             ||||||||||||||||| ||||||
Sbjct: 97399 tggcttccactgtctctgttgaaa 97422
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>emb|AL935170.11| Mouse DNA sequence from clone RP23-480P16 on chromosome 2, complete
              sequence
          Length = 181154

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 433    tctggcttccactgtctcttttga 456
              |||||||||||||| |||||||||
Sbjct: 135153 tctggcttccactggctcttttga 135130
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>emb|AL935312.10| Mouse DNA sequence from clone RP23-56A7 on chromosome 2, complete
              sequence
          Length = 124236

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 445    tgtctcttttgaaagctgca 464
              ||||||||||||||||||||
Sbjct: 110146 tgtctcttttgaaagctgca 110127
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>gb|AC005738.1|AC005738 Homo sapiens chromosome 5, BAC clone 7g12 (LBNL H126), complete sequence
          Length = 134506

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 322    gcctctttgctgccctctcgtgct 345
              |||||||||||||||||| |||||
Sbjct: 109589 gcctctttgctgccctctggtgct 109612
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>gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome 16, complete sequence
          Length = 180800

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    aacacctaacaatttatgtc 132
              ||||||||||||||||||||
Sbjct: 109323 aacacctaacaatttatgtc 109304


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,749,321
Number of Sequences: 3902068
Number of extensions: 4749321
Number of successful extensions: 95267
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95124
Number of HSP's gapped (non-prelim): 139
length of query: 661
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 638
effective length of database: 17,143,297,704
effective search space: 10937423935152
effective search space used: 10937423935152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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