ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal8l06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genom... 204 3e-49
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 204 3e-49
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 204 3e-49
4dbj|AK071374.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 4e-42
5dbj|AK060622.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 4e-42
6gb|U81960.1|ZMU81960 Zea mays kinase associated protein phosphat... 105 2e-19
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
8dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
9gb|AC132914.7| Mus musculus chromosome 1, clone RP24-318M2, comp... 44 0.55
10ref|XM_961848.1| PREDICTED: Tribolium castaneum similar to CG175... 44 0.55
11gb|AC174763.1| Gasterosteus aculeatus clone VMRC28-119C03, compl... 44 0.55
12emb|AL731682.20| Mouse DNA sequence from clone RP23-123F7 on chr... 44 0.55
13ref|NM_124861.3| Arabidopsis thaliana antiporter/ glucose-6-phos... 42 2.2
14gb|AC125155.4| Mus musculus BAC clone RP24-380D9 from chromosome... 42 2.2
15emb|BX546470.1| Human DNA sequence from clone WI2-88884H1 on chr... 42 2.2
16gb|AC107204.4| Homo sapiens 3p BAC RP11-655A17 (Roswell Park Can... 42 2.2
17gb|AC108709.3| Homo sapiens 3 BAC RP11-81P15 (Roswell Park Cance... 42 2.2
18gb|AY057679.1| Arabidopsis thaliana AT5g54800/MBG8_6 mRNA, compl... 42 2.2
19gb|AC134845.5| Mus musculus BAC clone RP24-424K5 from chromosome... 42 2.2
20emb|BX831242.1|CNS0A1N3 Arabidopsis thaliana Full-length cDNA Co... 42 2.2
21gb|AY086600.1| Arabidopsis thaliana clone 26107 mRNA, complete s... 42 2.2
22dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 2.2
23gb|AF233658.1|AF233658 Arabidopsis thaliana glucose 6 phosphate/... 42 2.2
24gb|BT002212.1| Arabidopsis thaliana At5g54800/MBG8_6 mRNA, compl... 42 2.2
25emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on ch... 42 2.2
26gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome... 40 8.6
27gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
28gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence 40 8.6
29gb|AC119877.9| Mus musculus chromosome 3, clone RP24-324H23, com... 40 8.6
30gb|AC107676.10| Mus musculus chromosome 7, clone RP24-492K24, co... 40 8.6
31gb|AC162164.7| Mus musculus chromosome 7, clone RP23-308C18, com... 40 8.6
32gb|AC166827.2| Mus musculus BAC clone RP23-359M9 from chromosome... 40 8.6
33gb|AC146545.2| Gasterosteus aculeatus clone CH213-80P16, complet... 40 8.6
34gb|AC131652.2| Mus musculus BAC clone RP23-216A20 from 16, compl... 40 8.6
35gb|AC115825.11| Mus musculus chromosome 9, clone RP23-444E13, co... 40 8.6
36gb|AC122496.2| Mus musculus BAC clone RP24-400K16 from 5, comple... 40 8.6
37ref|XM_725584.1| Plasmodium yoelii yoelii str. 17XNL cir2 protei... 40 8.6
38gb|AC022202.12| Homo sapiens BAC clone RP11-321E8 from 7, comple... 40 8.6
39gb|AC111140.11| Mus musculus chromosome 3, clone RP23-369L16, co... 40 8.6
40gb|AC149474.15| Medicago truncatula clone mth2-122l24, complete ... 40 8.6
41gb|AC149080.14| Medicago truncatula clone mth2-75j5, complete se... 40 8.6
42emb|AL353673.16| Human DNA sequence from clone RP11-443H16 on ch... 40 8.6
43emb|AL121962.11|HSJ136A11 Human DNA sequence from clone RP1-136A... 40 8.6
44gb|AC158926.4| Mus musculus chromosome 3, clone RP24-93J4, compl... 40 8.6
45gb|AC025774.5| Homo sapiens chromosome 5 clone CTD-2292N2, compl... 40 8.6
46gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome ... 40 8.6
47gb|AC092994.4| Homo sapiens 3 BAC RP11-656A15 (Roswell Park Canc... 40 8.6
48gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete s... 40 8.6
49gb|AC080081.5| Homo sapiens BAC clone RP11-530E5 from 4, complet... 40 8.6
50gb|AC093841.3| Homo sapiens BAC clone RP11-438F11 from 4, comple... 40 8.6
51gb|AC018437.10| Homo sapiens chromosome 8, clone RP11-77B22, com... 40 8.6
52gb|AC101979.13| Mus musculus chromosome 3, clone RP24-338A7, com... 40 8.6
53gb|AC116574.6| Mus musculus BAC clone RP23-234F20 from chromosom... 40 8.6
54emb|BX511233.10| Zebrafish DNA sequence from clone CH211-152P11 ... 40 8.6
55dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
56dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
57emb|BX677676.6| Zebrafish DNA sequence from clone DKEYP-12A9 in ... 40 8.6
58gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold 40 8.6
59gb|AE009689.1| Brucella melitensis 16M chromosome II, section 51... 40 8.6
60gb|AC008007.7|AC008007 Genomic sequence for Arabidopsis thaliana... 40 8.6
61gb|AC092698.11| Homo sapiens chromosome 8, clone RP11-813M16, co... 40 8.6
62gb|AC154302.1| Mus musculus BAC clone RP23-378K2 from chromosome... 40 8.6
63dbj|AP005540.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
64emb|CR678465.9| Zebrafish DNA sequence from clone DKEY-234P10 in... 40 8.6
65emb|CR925748.9| Zebrafish DNA sequence from clone CH211-142K17 i... 40 8.6
66gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
67emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb... 40 8.6
68gb|AF069716.1|AF069716 Arabidopsis Thaliana BAC F6A4, Chromosome... 40 8.6
69gb|AC154234.1| Mus musculus BAC clone RP24-345H5 from 16, comple... 40 8.6
70gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome... 40 8.6 
>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete
             sequence
          Length = 166888

 Score =  204 bits (103), Expect = 3e-49
 Identities = 163/183 (89%)
 Strand = Plus / Plus

                                                                         
Query: 271   acttacagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggc 330
             ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||
Sbjct: 79880 acttacagatacttttgatgaactcccaagtgttataatatcaccatctgcaagttcagc 79939

                                                                         
Query: 331   aggttcactccaacgcctagaaccaacatcaggatgggcaactgcctgggaattcaagaa 390
             ||| |||| |||||||||||| ||||||||||||||   ||||| | |||||||||| ||
Sbjct: 79940 aggctcaccccaacgcctagatccaacatcaggatgattaactgaccgggaattcaaaaa 79999

                                                                         
Query: 391   ggttccatttaaactgcccatatccacaagttcccatctgagtgtctgcgatataagagt 450
              |||||||||| ||| ||||||||||||| ||||||| ||||| ||||| ||| ||||||
Sbjct: 80000 tgttccatttagactacccatatccacaatttcccatttgagtttctgcaataaaagagt 80059

                
Query: 451   aat 453
             |||
Sbjct: 80060 aat 80062
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  204 bits (103), Expect = 3e-49
 Identities = 163/183 (89%)
 Strand = Plus / Minus

                                                                            
Query: 271      acttacagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggc 330
                ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||
Sbjct: 33585200 acttacagatacttttgatgaactcccaagtgttataatatcaccatctgcaagttcagc 33585141

                                                                            
Query: 331      aggttcactccaacgcctagaaccaacatcaggatgggcaactgcctgggaattcaagaa 390
                ||| |||| |||||||||||| ||||||||||||||   ||||| | |||||||||| ||
Sbjct: 33585140 aggctcaccccaacgcctagatccaacatcaggatgattaactgaccgggaattcaaaaa 33585081

                                                                            
Query: 391      ggttccatttaaactgcccatatccacaagttcccatctgagtgtctgcgatataagagt 450
                 |||||||||| ||| ||||||||||||| ||||||| ||||| ||||| ||| ||||||
Sbjct: 33585080 tgttccatttagactacccatatccacaatttcccatttgagtttctgcaataaaagagt 33585021

                   
Query: 451      aat 453
                |||
Sbjct: 33585020 aat 33585018
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  204 bits (103), Expect = 3e-49
 Identities = 163/183 (89%)
 Strand = Plus / Minus

                                                                            
Query: 271      acttacagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggc 330
                ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||
Sbjct: 33675672 acttacagatacttttgatgaactcccaagtgttataatatcaccatctgcaagttcagc 33675613

                                                                            
Query: 331      aggttcactccaacgcctagaaccaacatcaggatgggcaactgcctgggaattcaagaa 390
                ||| |||| |||||||||||| ||||||||||||||   ||||| | |||||||||| ||
Sbjct: 33675612 aggctcaccccaacgcctagatccaacatcaggatgattaactgaccgggaattcaaaaa 33675553

                                                                            
Query: 391      ggttccatttaaactgcccatatccacaagttcccatctgagtgtctgcgatataagagt 450
                 |||||||||| ||| ||||||||||||| ||||||| ||||| ||||| ||| ||||||
Sbjct: 33675552 tgttccatttagactacccatatccacaatttcccatttgagtttctgcaataaaagagt 33675493

                   
Query: 451      aat 453
                |||
Sbjct: 33675492 aat 33675490
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>dbj|AK071374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093B03, full
           insert sequence
          Length = 1957

 Score =  180 bits (91), Expect = 4e-42
 Identities = 142/159 (89%)
 Strand = Plus / Minus

                                                                       
Query: 275 acagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggcaggt 334
           ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 839 acagatacttttgatgaactcccaagtgttataatatcaccatctgcaagttcagcaggc 780

                                                                       
Query: 335 tcactccaacgcctagaaccaacatcaggatgggcaactgcctgggaattcaagaaggtt 394
           |||| |||||||||||| ||||||||||||||   ||||| | |||||||||| || |||
Sbjct: 779 tcaccccaacgcctagatccaacatcaggatgattaactgaccgggaattcaaaaatgtt 720

                                                  
Query: 395 ccatttaaactgcccatatccacaagttcccatctgagt 433
           ||||||| ||| ||||||||||||| ||||||| |||||
Sbjct: 719 ccatttagactacccatatccacaatttcccatttgagt 681
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>dbj|AK060622.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-D10, full
           insert sequence
          Length = 1398

 Score =  180 bits (91), Expect = 4e-42
 Identities = 142/159 (89%)
 Strand = Plus / Minus

                                                                       
Query: 275 acagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggcaggt 334
           ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| 
Sbjct: 269 acagatacttttgatgaactcccaagtgttataatatcaccatctgcaagttcagcaggc 210

                                                                       
Query: 335 tcactccaacgcctagaaccaacatcaggatgggcaactgcctgggaattcaagaaggtt 394
           |||| |||||||||||| ||||||||||||||   ||||| | |||||||||| || |||
Sbjct: 209 tcaccccaacgcctagatccaacatcaggatgattaactgaccgggaattcaaaaatgtt 150

                                                  
Query: 395 ccatttaaactgcccatatccacaagttcccatctgagt 433
           ||||||| ||| ||||||||||||| ||||||| |||||
Sbjct: 149 ccatttagactacccatatccacaatttcccatttgagt 111
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>gb|U81960.1|ZMU81960 Zea mays kinase associated protein phosphatase (KAPP) mRNA,
           complete cds
          Length = 2072

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Minus

                                                                       
Query: 287 gatgaactcccaagtgtaataatatcaccatcagcaagttcggcaggttcactccaacgc 346
           |||||| |||| || || |||||||||||||  |||||||| |||||||||| |||| ||
Sbjct: 879 gatgaagtccctagagttataatatcaccatgtgcaagttcagcaggttcaccccaatgc 820

                                                                       
Query: 347 ctagaaccaacatcaggatgggcaactgcctgggaattcaagaaggttccatttaaactg 406
           ||||| ||| ||   ||||||  ||| |||||||| |||||||| |||||||| || |||
Sbjct: 819 ctagacccagcacttggatggtgaaccgcctgggagttcaagaaagttccattcaagctg 760

                                
Query: 407 cccatatccacaagttcccat 427
           ||||| |||||||||||||||
Sbjct: 759 cccatgtccacaagttcccat 739
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 125/157 (79%)
 Strand = Plus / Minus

                                                                           
Query: 271     acttacagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggc 330
               ||||||||||| |||||||||| | || || || ||||| |||||||| || ||||| ||
Sbjct: 6087684 acttacagatagttttgatgaagttcctagagttataatgtcaccatctgctagttcagc 6087625

                                                                           
Query: 331     aggttcactccaacgcctagaaccaacatcaggatgggcaactgcctgggaattcaagaa 390
                || |||| |||  |||| || |||||||  ||||||  ||||||| | || ||||  ||
Sbjct: 6087624 tggctcaccccagtgcctggacccaacatttggatggtgaactgcccgagagttcacaaa 6087565

                                                    
Query: 391     ggttccatttaaactgcccatatccacaagttcccat 427
                || ||||| || |||||||| ||||||| |||||||
Sbjct: 6087564 tgtcccattcaagctgcccatgtccacaatttcccat 6087528
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>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0008C11
          Length = 157205

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 125/157 (79%)
 Strand = Plus / Minus

                                                                          
Query: 271    acttacagatacttttgatgaactcccaagtgtaataatatcaccatcagcaagttcggc 330
              ||||||||||| |||||||||| | || || || ||||| |||||||| || ||||| ||
Sbjct: 142854 acttacagatagttttgatgaagttcctagagttataatgtcaccatctgctagttcagc 142795

                                                                          
Query: 331    aggttcactccaacgcctagaaccaacatcaggatgggcaactgcctgggaattcaagaa 390
               || |||| |||  |||| || |||||||  ||||||  ||||||| | || ||||  ||
Sbjct: 142794 tggctcaccccagtgcctggacccaacatttggatggtgaactgcccgagagttcacaaa 142735

                                                   
Query: 391    ggttccatttaaactgcccatatccacaagttcccat 427
               || ||||| || |||||||| ||||||| |||||||
Sbjct: 142734 tgtcccattcaagctgcccatgtccacaatttcccat 142698
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>gb|AC132914.7| Mus musculus chromosome 1, clone RP24-318M2, complete sequence
          Length = 157264

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 487   atattcacatgtacatatacat 508
             ||||||||||||||||||||||
Sbjct: 95126 atattcacatgtacatatacat 95105
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>ref|XM_961848.1| PREDICTED: Tribolium castaneum similar to CG17598-PA (LOC655321),
            mRNA
          Length = 1720

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 528  tatattatgatttatgaaccaa 549
            ||||||||||||||||||||||
Sbjct: 1598 tatattatgatttatgaaccaa 1619
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>gb|AC174763.1| Gasterosteus aculeatus clone VMRC28-119C03, complete sequence
          Length = 138567

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 487    atattcacatgtacatatacat 508
              ||||||||||||||||||||||
Sbjct: 123056 atattcacatgtacatatacat 123035
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>emb|AL731682.20| Mouse DNA sequence from clone RP23-123F7 on chromosome 2, complete
             sequence
          Length = 201290

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 487   atattcacatgtacatatacat 508
             ||||||||||||||||||||||
Sbjct: 55173 atattcacatgtacatatacat 55194
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>ref|NM_124861.3| Arabidopsis thaliana antiporter/ glucose-6-phosphate transporter
            AT5G54800 mRNA, complete cds
          Length = 1627

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 373  tgcctgggaattcaagaaggttcca 397
            ||||||||||| |||||||||||||
Sbjct: 1295 tgcctgggaatacaagaaggttcca 1271
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>gb|AC125155.4| Mus musculus BAC clone RP24-380D9 from chromosome 6, complete sequence
          Length = 173003

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    acatatctgagtatgtgtata 91
             |||||||||||||||||||||
Sbjct: 76065 acatatctgagtatgtgtata 76085
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>emb|BX546470.1| Human DNA sequence from clone WI2-88884H1 on chromosome X Contains the
             5' end of a aldo-keto reductase family 1 member B1 (aldose
             reductase) (AKR1B1) pseudogene, complete sequence
          Length = 42449

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 493   acatgtacatatacattgtga 513
             |||||||||||||||||||||
Sbjct: 22407 acatgtacatatacattgtga 22427
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>gb|AC107204.4| Homo sapiens 3p BAC RP11-655A17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 170799

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    gataacataaaaattaagcca 265
              |||||||||||||||||||||
Sbjct: 105460 gataacataaaaattaagcca 105440
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>gb|AC108709.3| Homo sapiens 3 BAC RP11-81P15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 179223

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    gataacataaaaattaagcca 265
              |||||||||||||||||||||
Sbjct: 160624 gataacataaaaattaagcca 160604
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>gb|AY057679.1| Arabidopsis thaliana AT5g54800/MBG8_6 mRNA, complete cds
          Length = 1555

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 373  tgcctgggaattcaagaaggttcca 397
            ||||||||||| |||||||||||||
Sbjct: 1223 tgcctgggaatacaagaaggttcca 1199
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>gb|AC134845.5| Mus musculus BAC clone RP24-424K5 from chromosome 1, complete sequence
          Length = 194449

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 485   ctatattcacatgtacatata 505
             |||||||||||||||||||||
Sbjct: 98071 ctatattcacatgtacatata 98091
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>emb|BX831242.1|CNS0A1N3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS71ZB08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1606

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 373  tgcctgggaattcaagaaggttcca 397
            ||||||||||| |||||||||||||
Sbjct: 1294 tgcctgggaatacaagaaggttcca 1270
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>gb|AY086600.1| Arabidopsis thaliana clone 26107 mRNA, complete sequence
          Length = 1571

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 373  tgcctgggaattcaagaaggttcca 397
            ||||||||||| |||||||||||||
Sbjct: 1288 tgcctgggaatacaagaaggttcca 1264
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 318     cagcaagttcggcaggttcac 338
               |||||||||||||||||||||
Sbjct: 3628416 cagcaagttcggcaggttcac 3628396
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>gb|AF233658.1|AF233658 Arabidopsis thaliana glucose 6 phosphate/phosphate translocator mRNA,
            complete cds
          Length = 1384

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 373  tgcctgggaattcaagaaggttcca 397
            ||||||||||| |||||||||||||
Sbjct: 1229 tgcctgggaatacaagaaggttcca 1205
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>gb|BT002212.1| Arabidopsis thaliana At5g54800/MBG8_6 mRNA, complete cds
          Length = 1167

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 373  tgcctgggaattcaagaaggttcca 397
            ||||||||||| |||||||||||||
Sbjct: 1158 tgcctgggaatacaagaaggttcca 1134
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>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete
              sequence
          Length = 223059

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 246    ataacataaaaattaagccac 266
              |||||||||||||||||||||
Sbjct: 109809 ataacataaaaattaagccac 109829
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>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 486   tatattcacatgtacatata 505
             ||||||||||||||||||||
Sbjct: 41773 tatattcacatgtacatata 41792
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>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09,
              complete sequence
          Length = 178320

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 230    atgtttcatgctaatgataacata 253
              |||||||||||||||| |||||||
Sbjct: 145255 atgtttcatgctaatggtaacata 145232
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>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 315    catcagcaagttcggcaggttcac 338
              |||||||| |||||||||||||||
Sbjct: 740514 catcagcatgttcggcaggttcac 740537
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>gb|AC119877.9| Mus musculus chromosome 3, clone RP24-324H23, complete sequence
          Length = 155784

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 489  attcacatgtacatatacat 508
            ||||||||||||||||||||
Sbjct: 2905 attcacatgtacatatacat 2924
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>gb|AC107676.10| Mus musculus chromosome 7, clone RP24-492K24, complete sequence
          Length = 158478

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 523   ttgaatatattatgatttat 542
             ||||||||||||||||||||
Sbjct: 81516 ttgaatatattatgatttat 81497
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>gb|AC162164.7| Mus musculus chromosome 7, clone RP23-308C18, complete sequence
          Length = 187253

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   ttgaatatattatgatttat 542
             ||||||||||||||||||||
Sbjct: 42529 ttgaatatattatgatttat 42548
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>gb|AC166827.2| Mus musculus BAC clone RP23-359M9 from chromosome 12, complete sequence
          Length = 219729

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     taacaaaaaatataactgca 65
              ||||||||||||||||||||
Sbjct: 146090 taacaaaaaatataactgca 146071
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>gb|AC146545.2| Gasterosteus aculeatus clone CH213-80P16, complete sequence
          Length = 195850

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 505   acattgtgattgtatgaattgaat 528
             |||||||| |||||||||||||||
Sbjct: 45707 acattgtgtttgtatgaattgaat 45730
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>gb|AC131652.2| Mus musculus BAC clone RP23-216A20 from 16, complete sequence
          Length = 184989

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 509    tgtgattgtatgaattgaatatat 532
              ||||| ||||||||||||||||||
Sbjct: 133284 tgtgagtgtatgaattgaatatat 133261
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>gb|AC115825.11| Mus musculus chromosome 9, clone RP23-444E13, complete sequence
          Length = 192100

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 489    attcacatgtacatatacat 508
              ||||||||||||||||||||
Sbjct: 160589 attcacatgtacatatacat 160608
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>gb|AC122496.2| Mus musculus BAC clone RP24-400K16 from 5, complete sequence
          Length = 180081

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 486   tatattcacatgtacatata 505
             ||||||||||||||||||||
Sbjct: 41837 tatattcacatgtacatata 41818
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>ref|XM_725584.1| Plasmodium yoelii yoelii str. 17XNL cir2 protein (PY02757) partial
           mRNA
          Length = 966

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 241 taatgataacataaaaatta 260
           ||||||||||||||||||||
Sbjct: 126 taatgataacataaaaatta 145
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>gb|AC022202.12| Homo sapiens BAC clone RP11-321E8 from 7, complete sequence
          Length = 95097

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 307  aatatcaccatcagcaagtt 326
            ||||||||||||||||||||
Sbjct: 8371 aatatcaccatcagcaagtt 8390
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>gb|AC111140.11| Mus musculus chromosome 3, clone RP23-369L16, complete sequence
          Length = 236182

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   attcacatgtacatatacat 508
             ||||||||||||||||||||
Sbjct: 40902 attcacatgtacatatacat 40883
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>gb|AC149474.15| Medicago truncatula clone mth2-122l24, complete sequence
          Length = 129008

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  taatatcaccatcagcaagt 325
            ||||||||||||||||||||
Sbjct: 4814 taatatcaccatcagcaagt 4833
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>gb|AC149080.14| Medicago truncatula clone mth2-75j5, complete sequence
          Length = 96907

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   taatatcaccatcagcaagt 325
             ||||||||||||||||||||
Sbjct: 66227 taatatcaccatcagcaagt 66208
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>emb|AL353673.16| Human DNA sequence from clone RP11-443H16 on chromosome 13 Contains a
             CpG island, complete sequence
          Length = 90724

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   catgtacatatacattgtga 513
             ||||||||||||||||||||
Sbjct: 34850 catgtacatatacattgtga 34831
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>emb|AL121962.11|HSJ136A11 Human DNA sequence from clone RP1-136A11 on chromosome 6q13-14.3,
             complete sequence
          Length = 90050

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 561   ataatctatgatattccttt 580
             ||||||||||||||||||||
Sbjct: 56452 ataatctatgatattccttt 56433
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>gb|AC158926.4| Mus musculus chromosome 3, clone RP24-93J4, complete sequence
          Length = 185247

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   aatggaagaaaggtagctat 488
             ||||||||||||||||||||
Sbjct: 23090 aatggaagaaaggtagctat 23109
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>gb|AC025774.5| Homo sapiens chromosome 5 clone CTD-2292N2, complete sequence
          Length = 155092

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    aatcggtaacaaaaaatata 59
             ||||||||||||||||||||
Sbjct: 47101 aatcggtaacaaaaaatata 47120
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>gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome 14, complete sequence
          Length = 227675

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   atacttttgatgaactccca 298
             ||||||||||||||||||||
Sbjct: 60627 atacttttgatgaactccca 60646
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>gb|AC092994.4| Homo sapiens 3 BAC RP11-656A15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159445

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 486   tatattcacatgtacatatacatt 509
             ||||| ||||||||||||||||||
Sbjct: 60766 tatatacacatgtacatatacatt 60789
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>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence
          Length = 125707

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  taatatcaccatcagcaagt 325
            ||||||||||||||||||||
Sbjct: 1804 taatatcaccatcagcaagt 1785
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>gb|AC080081.5| Homo sapiens BAC clone RP11-530E5 from 4, complete sequence
          Length = 77730

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   tattcacatgtacatataca 507
             ||||||||||||||||||||
Sbjct: 10769 tattcacatgtacatataca 10788
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>gb|AC093841.3| Homo sapiens BAC clone RP11-438F11 from 4, complete sequence
          Length = 168190

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   gctaatgataacataaaaat 258
             ||||||||||||||||||||
Sbjct: 66336 gctaatgataacataaaaat 66317
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>gb|AC018437.10| Homo sapiens chromosome 8, clone RP11-77B22, complete sequence
          Length = 192586

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    caaaaaatataactgcataa 68
             ||||||||||||||||||||
Sbjct: 95230 caaaaaatataactgcataa 95211
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>gb|AC101979.13| Mus musculus chromosome 3, clone RP24-338A7, complete sequence
          Length = 161025

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   aatggaagaaaggtagctat 488
             ||||||||||||||||||||
Sbjct: 68746 aatggaagaaaggtagctat 68765
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>gb|AC116574.6| Mus musculus BAC clone RP23-234F20 from chromosome 12, complete
             sequence
          Length = 191808

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    taacaaaaaatataactgca 65
             ||||||||||||||||||||
Sbjct: 73530 taacaaaaaatataactgca 73511
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>emb|BX511233.10| Zebrafish DNA sequence from clone CH211-152P11 in linkage group 19,
              complete sequence
          Length = 193921

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    taatgataacataaaaatta 260
              ||||||||||||||||||||
Sbjct: 185850 taatgataacataaaaatta 185869
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 107     atttatgtatagacaaatgc 126
               ||||||||||||||||||||
Sbjct: 2132755 atttatgtatagacaaatgc 2132736
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 230      atgtttcatgctaatgataacata 253
                |||||||||||||||| |||||||
Sbjct: 12594501 atgtttcatgctaatggtaacata 12594524
to top
>emb|BX677676.6| Zebrafish DNA sequence from clone DKEYP-12A9 in linkage group 2,
             complete sequence
          Length = 169301

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 599   aaaaatgccccagaaatcat 618
             ||||||||||||||||||||
Sbjct: 23859 aaaaatgccccagaaatcat 23878
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>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold
          Length = 1819346

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 486     tatattcacatgtacatata 505
               ||||||||||||||||||||
Sbjct: 1350535 tatattcacatgtacatata 1350554
to top
>gb|AE009689.1| Brucella melitensis 16M chromosome II, section 51 of 107 of the
            complete sequence
          Length = 11562

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 315  catcagcaagttcggcaggttcac 338
            |||||||| |||||||||||||||
Sbjct: 3014 catcagcatgttcggcaggttcac 2991
to top
>gb|AC008007.7|AC008007 Genomic sequence for Arabidopsis thaliana BAC F12M16 from chromosome I,
             complete sequence
          Length = 130235

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 517   tatgaattgaatatattatg 536
             ||||||||||||||||||||
Sbjct: 29687 tatgaattgaatatattatg 29668
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>gb|AC092698.11| Homo sapiens chromosome 8, clone RP11-813M16, complete sequence
          Length = 110085

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    ataactgcataatgacatat 76
             ||||||||||||||||||||
Sbjct: 67487 ataactgcataatgacatat 67468
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>gb|AC154302.1| Mus musculus BAC clone RP23-378K2 from chromosome 9, complete
            sequence
          Length = 167400

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 489  attcacatgtacatatacat 508
            ||||||||||||||||||||
Sbjct: 4258 attcacatgtacatatacat 4277
to top
>dbj|AP005540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0092N05
          Length = 120667

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 230   atgtttcatgctaatgataacata 253
             |||||||||||||||| |||||||
Sbjct: 99514 atgtttcatgctaatggtaacata 99537
to top
>emb|CR678465.9| Zebrafish DNA sequence from clone DKEY-234P10 in linkage group 19,
             complete sequence
          Length = 82040

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   attcacatgtacatatacat 508
             ||||||||||||||||||||
Sbjct: 32936 attcacatgtacatatacat 32955
to top
>emb|CR925748.9| Zebrafish DNA sequence from clone CH211-142K17 in linkage group 2,
             complete sequence
          Length = 69407

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 599   aaaaatgccccagaaatcat 618
             ||||||||||||||||||||
Sbjct: 27144 aaaaatgccccagaaatcat 27163
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 107     atttatgtatagacaaatgc 126
               ||||||||||||||||||||
Sbjct: 2132699 atttatgtatagacaaatgc 2132680
to top
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132703

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   atttatgtatagacaaatgc 126
             ||||||||||||||||||||
Sbjct: 14979 atttatgtatagacaaatgc 14960
to top
>gb|AF069716.1|AF069716 Arabidopsis Thaliana BAC F6A4, Chromosome IV, near 60.5 cM, complete
             sequence
          Length = 99123

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   atatattatgatttatgaac 546
             ||||||||||||||||||||
Sbjct: 32170 atatattatgatttatgaac 32151
to top
>gb|AC154234.1| Mus musculus BAC clone RP24-345H5 from 16, complete sequence
          Length = 161505

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 509   tgtgattgtatgaattgaatatat 532
             ||||| ||||||||||||||||||
Sbjct: 10035 tgtgagtgtatgaattgaatatat 10012
to top
>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence
          Length = 224370

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 486    tatattcacatgtacatata 505
              ||||||||||||||||||||
Sbjct: 109865 tatattcacatgtacatata 109884


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,544,154
Number of Sequences: 3902068
Number of extensions: 6544154
Number of successful extensions: 132969
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132581
Number of HSP's gapped (non-prelim): 388
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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