No.
Definition
Score (bits)
E Value
1 gb|AY327452.1| Triticum aestivum YRK1 mRNA, complete cds
228
2e-56
2 gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (L...
226
7e-56
3 gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (T...
216
7e-53
4 emb|AJ234710.1|HVU234710 Hordeum vulgare genomic DNA fragment; c...
200
4e-48
5 gb|AY083681.1| Avena sativa clone OP14 receptor kinase gene clus...
198
2e-47
6 gb|AY083679.1| Avena sativa clone OP10rc receptor kinase gene cl...
198
2e-47
7 gb|U51330.1|TAU51330 Triticum aestivum leaf rust resistance kina...
172
1e-39
8 gb|AF085164.1|AF085164 Hordeum vulgare receptor-like kinase LRK1...
165
2e-37
9 gb|AY083682.1| Avena sativa clone OP45 receptor kinase gene clus...
163
9e-37
10 ref|NM_184110.1| Oryza sativa (japonica cultivar-group), mRNA
141
3e-30
11 ref|NM_184106.1| Oryza sativa (japonica cultivar-group), mRNA
141
3e-30
12 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
141
3e-30
13 dbj|AP002747.2| Oryza sativa (japonica cultivar-group) genomic D...
141
3e-30
14 dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic D...
141
3e-30
15 ref|XM_549928.1| Oryza sativa (japonica cultivar-group), mRNA
133
8e-28
16 ref|NM_183554.1| Oryza sativa (japonica cultivar-group), mRNA
131
3e-27
17 gb|AF044260.1| Oryza sativa (japonica cultivar-group) clone OsRL...
131
3e-27
18 gb|AF077130.1| Oryza sativa (indica cultivar-group) clone OsGRLK...
131
3e-27
19 dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic D...
131
3e-27
20 ref|NM_184059.2| Oryza sativa (japonica cultivar-group), mRNA
129
1e-26
21 dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic D...
129
1e-26
22 dbj|AK111700.1| Oryza sativa (japonica cultivar-group) cDNA clon...
129
1e-26
23 gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33...
125
2e-25
24 gb|AY083680.1| Avena sativa clone OP9 receptor kinase gene clust...
117
5e-23
25 dbj|AP002867.1| Oryza sativa (japonica cultivar-group) genomic D...
117
5e-23
26 ref|XM_549892.1| Oryza sativa (japonica cultivar-group), mRNA
107
5e-20
27 gb|AF238472.1|AF238472 Oryza sativa receptor-like kinase (RLG15)...
107
5e-20
28 gb|AF237568.1|AF237568 Oryza sativa receptor-like protein kinase...
107
5e-20
29 gb|AF100764.1|AF100764 Oryza sativa OS8LRK pseudogene sequence
107
5e-20
30 gb|AF238477.1|AF238477 Oryza sativa receptor-like kinase (RLG5) ...
105
2e-19
31 gb|AF248493.1|AF248493 Oryza sativa receptor-like kinase (RLG18)...
105
2e-19
32 ref|XM_549922.1| Oryza sativa (japonica cultivar-group), mRNA
103
7e-19
33 gb|AF238474.1|AF238474 Oryza sativa receptor-like kinase (RLG16)...
101
3e-18
34 dbj|AK120121.1| Oryza sativa (japonica cultivar-group) cDNA clon...
101
3e-18
35 gb|AF164021.1|AF164021 Oryza sativa clone GRLG4 receptor kinase ...
101
3e-18
36 emb|AJ841792.1| Zea mays mRNA for Ser/Thr receptor-like kinase (...
98
5e-17
37 gb|AF044489.1|AF044489 Oryza sativa receptor-like protein kinase...
94
7e-16
38 ref|NM_184075.2| Oryza sativa (japonica cultivar-group), mRNA
92
3e-15
39 dbj|AK121074.1| Oryza sativa (japonica cultivar-group) cDNA clon...
92
3e-15
40 gb|AY038002.1| Avena sativa isolate Pc68LrkA receptor kinase gen...
84
7e-13
41 gb|AF085168.1|AF085168 Triticum aestivum receptor-like protein k...
74
7e-10
42 gb|AF445787.1|AF445787 Triticum aestivum clone KSUK963 kinase R-...
72
3e-09
43 gb|AY030191.1| Triticum aestivum receptor-like kinase (Rlk-R2) g...
52
0.002
44 ref|NM_123186.1| Arabidopsis thaliana ATP binding / kinase/ prot...
50
0.010
45 dbj|AB005247.2| Arabidopsis thaliana genomic DNA, chromosome 5, ...
50
0.010
46 gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete se...
48
0.038
47 emb|AJ303450.1|TAE303450 Triticum aestivum partial wyk3 gene, ex...
48
0.038
48 ref|NM_184080.1| Oryza sativa (japonica cultivar-group), mRNA
46
0.15
49 gb|AF237567.1|AF237567 Oryza sativa receptor-like protein kinase...
46
0.15
50 gb|AF100767.1|AF100767 Oryza sativa receptor-like kinase (8ARK3)...
46
0.15
51 ref|NM_123185.1| Arabidopsis thaliana ATP binding / kinase/ prot...
44
0.59
52 ref|NM_105363.1| Arabidopsis thaliana ATP binding / kinase/ prot...
44
0.59
53 ref|NM_105362.2| Arabidopsis thaliana kinase AT1G66910 mRNA, com...
44
0.59
54 emb|AL845512.9| Zebrafish DNA sequence from clone CH211-286M4 in...
44
0.59
55 gb|AY032613.1| Triticum aestivum receptor-like kinase (Wrlk-S3) ...
44
0.59
56 gb|AY030344.1| Triticum aestivum receptor-like kinase (Rlk-R3) g...
44
0.59
57 gb|AY064995.1| Arabidopsis thaliana At1g66920/T4O24_7 mRNA sequence
44
0.59
58 gb|AC158135.5| Mus musculus chromosome 3, clone RP24-393I15, com...
44
0.59
59 gb|AC130842.5| Mus musculus BAC clone RP24-448N19 from chromosom...
44
0.59
60 gb|AC083891.4|AC083891 Arabidopsis thaliana chromosome 1 BAC T4O...
44
0.59
61 ref|XM_637697.1| Dictyostelium discoideum hypothetical protein (...
42
2.3
62 gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173...
42
2.3
63 gb|AC105256.7| Mus musculus BAC clone RP23-413O13 from chromosom...
42
2.3
64 gb|AC146587.20| Medicago truncatula clone mth2-144j8, complete s...
42
2.3
65 gb|AC146788.13| Medicago truncatula clone mth2-11a6, complete se...
42
2.3
66 emb|CR405715.16| Zebrafish DNA sequence from clone DKEY-47K20 in...
42
2.3
67 gb|AC139525.3| Medicago truncatula clone mth2-26o22, complete se...
42
2.3
68 gb|AC141869.5| Mus musculus BAC clone RP24-424D1 from 8, complet...
42
2.3
69 ref|NM_118456.2| Arabidopsis thaliana ATP binding / protein kina...
40
9.2
70 ref|NM_118460.1| Arabidopsis thaliana ATP binding / protein kina...
40
9.2
71 ref|NM_105364.1| Arabidopsis thaliana kinase AT1G66930 mRNA, com...
40
9.2
72 ref|NM_117935.2| Arabidopsis thaliana kinase/ transmembrane rece...
40
9.2
73 gb|AC150698.3| Oryza sativa (japonica cultivar-group) chromosome...
40
9.2
74 gb|AC149876.2| Xenopus tropicalis clone CH216-166O21, complete s...
40
9.2
75 ref|XM_756059.1| Ustilago maydis 521 hypothetical protein (UM050...
40
9.2
76 gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genom...
40
9.2
77 gb|AC122261.2| Mus musculus BAC clone RP23-187F24 from 15, compl...
40
9.2
78 ref|XM_786025.1| PREDICTED: Strongylocentrotus purpuratus simila...
40
9.2
79 emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, ...
40
9.2
80 emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosome 4, ...
40
9.2
81 emb|AL138638.2|ATF23N14 Arabidopsis thaliana DNA chromosome 3, B...
40
9.2
82 emb|AL031326.1|ATF16G20 Arabidopsis thaliana DNA chromosome 4, B...
40
9.2
83 emb|AL022347.1|ATF21P8 Arabidopsis thaliana DNA chromosome 4, BA...
40
9.2
84 emb|AL021713.1|ATT9A21 Arabidopsis thaliana DNA chromosome 4, BA...
40
9.2
85 emb|BX640518.5| Zebrafish DNA sequence from clone DKEY-278M12 in...
40
9.2
86 emb|BX088710.15| Zebrafish DNA sequence from clone DKEY-3L5 in l...
40
9.2
87 gb|AC099675.2| Homo sapiens chromosome 1 clone RP11-459D6, compl...
40
9.2
88 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.2
89 gb|AC119038.4| Homo sapiens 3 BAC RP11-508O18 (Roswell Park Canc...
40
9.2
90 gb|AF296829.1|F3D18 Arabidopsis thaliana BAC F3D18
40
9.2
91 gb|AC154205.1| Mus musculus BAC clone RP24-88I1 from chromosome ...
40
9.2
92 dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.2
93 dbj|AP002460.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...
40
9.2
94 dbj|AK118799.1| Arabidopsis thaliana At4g23270 mRNA for putative...
40
9.2
95 dbj|AB046434.1| Arabidopsis thaliana DNA, chromosome 5 centromer...
40
9.2
96 dbj|AK072359.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.2
97 emb|BX004780.4| Zebrafish DNA sequence from clone CH211-202P1 in...
40
9.2
98 gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...
40
9.2
99 gb|AC145926.4| Gallus gallus BAC clone CH261-29I12 from chromoso...
40
9.2
100 gb|AC145932.3| Gallus gallus BAC clone CH261-37K10 from chromoso...
40
9.2
101 emb|AL591209.17| Mouse DNA sequence from clone RP23-309H19 on ch...
40
9.2
>gb|AF325196.1 |AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
LRK19 (Lrk19) genes, complete cds
Length = 35872
Score = 226 bits (114), Expect = 7e-56
Identities = 317/382 (82%), Gaps = 2/382 (0%)
Strand = Plus / Minus
Query: 290 acaaagggcttggggggaatctgcaggttctgcaacctccctgttaacatgtttaccacc 349
||||| ||||| ||||| ||||||| |||||| |||||| ||||||||||| || |||
Sbjct: 31081 acaaaaggcttcgggggcatctgcaaactctgcagcctccccgttaacatgttcacgacc 31022
Query: 350 tttgtcatcgatggccgattcttcgggttccactggatgcaccacagccccacaatactc 409
||||||||||| ||||| || ||||||||||||||||||||||||| |||| ||| |
Sbjct: 31021 tttgtcatcgacggccggtttctcgggttccactggatgcaccacagtgccaccatagcc 30962
Query: 410 agctgtctcatcttctccttgtcctctgctgtcatttccaaagtaagctcccaatcatgc 469
||||| |||| ||| || || || ||| ||| |||||||||||||| || | || | |
Sbjct: 30961 agctgcctcaccttgtctttctcttcttgagtcgtttccaaagtaagcgccaactcctcc 30902
Query: 470 ccactgattactttctggtagatccactcagggagatacacctcgtcctggttctcaaca 529
||| |||| ||||||| |||||||||||||||||| || || ||||||||| || | |
Sbjct: 30901 ccattgatcactttctcgtagatccactcagggaggtaaacatcgtcctggctcccgatt 30842
Query: 530 cttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactgtac 589
||||| || | |||||||| |||||||||||||| | ||||| ||| || |||||||||
Sbjct: 30841 cttgggtccgcgttcctcctcccgctcaccatttctagcaccagcatgccgaaactgtac 30782
Query: 590 acatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgccgatgt 649
|| ||||||||||| || || || ||||||||||||||||||||| ||||||| | || |
Sbjct: 30781 acgtctgacttgtacgatactcccccaaagttccgagagtatagc-tctggtg-caatat 30724
Query: 650 atcccattgtgcctcttgctgc 671
| ||||||||||||||||||||
Sbjct: 30723 agcccattgtgcctcttgctgc 30702
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
complete sequence
Length = 43261740
Score = 141 bits (71), Expect = 3e-30
Identities = 133/151 (88%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 524 tcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaa 583
||||||||||| ||||||||||||| |||||| |||||||| ||||||| ||| || |||
Sbjct: 999708 tcaacacttgggtctgagttcctccttccgctaaccatttctaacaccagcatgccgaaa 999649
Query: 584 ctgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgc 643
|| || ||||||||||||||||| | | ||||||||||||||||||||||| |||||||
Sbjct: 999648 ctataaacatctgacttgtaagatatctctccaaagttccgagagtatagc-tctggtg- 999591
Query: 644 cgatgtatcccattgtgcctcttgctgcagt 674
| || || ||||| |||||||||||||||||
Sbjct: 999590 caatatagcccatcgtgcctcttgctgcagt 999560
Score = 141 bits (71), Expect = 3e-30
Identities = 133/151 (88%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 524 tcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaa 583
||||||||||| ||||||||||||| ||||| |||||||| ||||||| ||| ||||||
Sbjct: 989385 tcaacacttgggtctgagttcctcctcccgctaaccatttctaacaccagcatgccaaaa 989326
Query: 584 ctgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgc 643
|| || ||||||||||||||||| | | |||||||||||||||| |||||| |||||||
Sbjct: 989325 ctataaacatctgacttgtaagatatctctccaaagttccgagaatatagc-tctggtg- 989268
Query: 644 cgatgtatcccattgtgcctcttgctgcagt 674
| || || |||||||||||||||||||||||
Sbjct: 989267 caatatagcccattgtgcctcttgctgcagt 989237
Score = 137 bits (69), Expect = 5e-29
Identities = 134/153 (87%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 522 tctcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaa 581
||||||||||||| || |||||||||| |||||| |||||||| || |||| ||| ||||
Sbjct: 979171 tctcaacacttgggtccgagttcctccttccgctaaccatttctaataccagcatgccaa 979112
Query: 582 aactgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggt 641
|||| || ||||||||||||||||| | | |||||||||||||||| |||||| ||||||
Sbjct: 979111 aactataaacatctgacttgtaagatatctctccaaagttccgagaatatagc-tctggt 979053
Query: 642 gccgatgtatcccattgtgcctcttgctgcagt 674
| | || || |||||||||||||||||||||||
Sbjct: 979052 g-caatatagcccattgtgcctcttgctgcagt 979021
Score = 133 bits (67), Expect = 8e-28
Identities = 132/151 (87%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 524 tcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaa 583
||||||||||| ||||||||||||| |||||| |||||||| ||||||| ||| || |||
Sbjct: 963889 tcaacacttgggtctgagttcctccttccgctaaccatttctaacaccagcatgccgaaa 963830
Query: 584 ctgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgc 643
|| || ||||||||||||||||| | | |||||||||||||||| |||||| |||||||
Sbjct: 963829 ctataaacatctgacttgtaagatatctctccaaagttccgagaatatagc-tctggtg- 963772
Query: 644 cgatgtatcccattgtgcctcttgctgcagt 674
| || || ||||| |||||||||||||||||
Sbjct: 963771 caatatagcccatcgtgcctcttgctgcagt 963741
Score = 131 bits (66), Expect = 3e-27
Identities = 128/146 (87%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 529 acttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactgta 588
||||||||||||||||||| |||||||| |||||||||||| | ||| ||||||||| |
Sbjct: 720097 acttggatctgagttcctctttccgctcaacatttccaacactagcatgccaaaactgaa 720156
Query: 589 cacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgccgatg 648
||||||||||||||||| ||| | |||||||||| ||| ||||| ||| |||| | |||
Sbjct: 720157 aacatctgacttgtaagataccgcgccaaagttcctagaatatag-ttccggtg-caatg 720214
Query: 649 tatcccattgtgcctcttgctgcagt 674
|| |||||||||||||||||||||||
Sbjct: 720215 taacccattgtgcctcttgctgcagt 720240
Score = 129 bits (65), Expect = 1e-26
Identities = 307/385 (79%), Gaps = 2/385 (0%)
Strand = Plus / Minus
Query: 285 acgacacaaagggcttggggggaatctgcaggttctgcaacctccctgttaacatgttta 344
|||| ||||| ||||| ||||| | ||| | |||||||||||| || |||| ||||||||
Sbjct: 747546 acgaaacaaatggcttagggggcacctgtatgttctgcaaccttccagttatcatgttta 747487
Query: 345 ccacctttgtcatcgatggccgattcttcgggttccactggatgcaccacagccccacaa 404
| |||||||||||||| |||||||| | ||||||||||| || ||||| || ||||||
Sbjct: 747486 cgacctttgtcatcgagggccgatttcttgggttccactgaatacaccatagtgccacaa 747427
Query: 405 tactcagctgtctcatcttctccttgtcctctgctgtcatttccaaagtaagctcccaat 464
||||||||||| | | | || || ||| ||||||||||| | |||| | | |
Sbjct: 747426 gggccagctgtctcaccatttgtttctcttcttctgtcatttccctactaagtacgaact 747367
Query: 465 catgcccactgattactttctggtagatccactcagggagatacacctcgtcctggttct 524
| |||||| | |||||||||| |||||||| || |||| || ||||| | |||||||
Sbjct: 747366 cctgcccagtaattactttctcatagatccattctgggaagtatacctcattttggttct 747307
Query: 525 caacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaac 584
|| |||||| || || |||||| ||| ||||||||||| ||||| | ||| |||||||
Sbjct: 747306 taatacttgggtcccagctcctccttccactcaccatttctaacacaagcatgccaaaac 747247
Query: 585 tgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgcc 644
| || |||||||||||||| || | | | |||||||||| ||| |||||| ||||||| |
Sbjct: 747246 tataaacatctgacttgtatgatatctccccaaagttcctagaatatagc-tctggtg-c 747189
Query: 645 gatgtatcccattgtgcctcttgct 669
||||||||||| ||||||||||||
Sbjct: 747188 aatgtatcccatcgtgcctcttgct 747164
Score = 119 bits (60), Expect = 1e-23
Identities = 93/104 (89%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 999915 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttctttggg 999856
Query: 377 ttccactggatgcaccacagccccacaatactcagctgtctcat 420
|||||||| ||||||||||| ||||||| ||||||||||||
Sbjct: 999855 ttccactgaatgcaccacagtgccacaatggccagctgtctcat 999812
Score = 117 bits (59), Expect = 5e-23
Identities = 169/203 (83%), Gaps = 2/203 (0%)
Strand = Plus / Minus
Query: 467 tgcccactgattactttctggtagatccactcagggagatacacctcgtcctggttctca 526
|||||| | |||||||||| ||||||||||| | | || ||||| | ||||| ||||
Sbjct: 794208 tgcccagtaattactttctcatagatccactccagaaagtagacctcattctggtcctca 794149
Query: 527 acacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactg 586
| |||||| ||||||||||||| ||| || |||||||| ||||| | ||| |||||||||
Sbjct: 794148 atacttgggtctgagttcctccttccactaaccatttctaacacaagcatgccaaaactg 794089
Query: 587 tacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgccga 646
|| || |||||||||||||| | | | |||||||||| ||| |||||| ||||||| | |
Sbjct: 794088 tatacgtctgacttgtaagatatctccccaaagttcctagaatatagc-tctggtg-caa 794031
Query: 647 tgtatcccattgtgcctcttgct 669
|||| ||||||||||||||||||
Sbjct: 794030 tgtagcccattgtgcctcttgct 794008
Score = 107 bits (54), Expect = 5e-20
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 292 aaagggcttggggggaatctgcaggttctgcaacctccctgttaacatgtttaccacctt 351
||||||||| ||||| | |||||| |||||||||||||| || |||||||||||||||||
Sbjct: 868033 aaagggcttagggggcacctgcagattctgcaacctccccgtcaacatgtttaccacctt 867974
Query: 352 tgtcatcgatggccgattcttcgggttccactggatgcacca 393
|||||| || ||||| || || ||||||||||| ||||||||
Sbjct: 867973 tgtcattgagggccggttttttgggttccactgaatgcacca 867932
Score = 107 bits (54), Expect = 5e-20
Identities = 161/194 (82%), Gaps = 2/194 (1%)
Strand = Plus / Minus
Query: 476 attactttctggtagatccactcagggagatacacctcgtcctggttctcaacacttgga 535
|||||||||| ||||||||||| || | || ||||| | |||||||||| ||| ||
Sbjct: 783372 attactttctcatagatccactctggaaagtagacctcattttggttctcaatactcggg 783313
Query: 536 tctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactgtacacatct 595
|||||||| |||| ||| ||||||||||| ||||| | ||| |||||||| || ||||||
Sbjct: 783312 tctgagtttctccttccactcaccatttctaacacaagcatgccaaaactatatacatct 783253
Query: 596 gacttgtaagacacccctccaaagttccgagagtatagcttctggtgccgatgtatccca 655
||||||||||| | | | |||||||||| ||| |||||| ||||||| | ||||| ||||
Sbjct: 783252 gacttgtaagatatctccccaaagttcctagaatatagc-tctggtg-caatgtagccca 783195
Query: 656 ttgtgcctcttgct 669
| ||||||||||||
Sbjct: 783194 tcgtgcctcttgct 783181
Score = 107 bits (54), Expect = 5e-20
Identities = 161/194 (82%), Gaps = 2/194 (1%)
Strand = Plus / Minus
Query: 476 attactttctggtagatccactcagggagatacacctcgtcctggttctcaacacttgga 535
|||||||||| ||||||||||| || | || ||||| | |||||||||| ||||||
Sbjct: 735884 attactttctcatagatccactctggaaagtatacctcattttggttctcaatacttggg 735825
Query: 536 tctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactgtacacatct 595
|| || |||||| ||| ||||||||||| || || | ||| ||||||||||| ||||||
Sbjct: 735824 tcccagctcctccttccactcaccatttctaaaacaaccatgccaaaactgtaaacatct 735765
Query: 596 gacttgtaagacacccctccaaagttccgagagtatagcttctggtgccgatgtatccca 655
||||||||||| | | | |||||||||| ||| |||||| || |||| | ||||||||||
Sbjct: 735764 gacttgtaagatatctccccaaagttcctagaatatagc-tccggtg-caatgtatccca 735707
Query: 656 ttgtgcctcttgct 669
||||||||||||||
Sbjct: 735706 ttgtgcctcttgct 735693
Score = 105 bits (53), Expect = 2e-19
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 989592 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttctttggg 989533
Query: 377 ttccactggatgcacca 393
|||||||| ||||||||
Sbjct: 989532 ttccactgaatgcacca 989516
Score = 105 bits (53), Expect = 2e-19
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 979376 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttctttggg 979317
Query: 377 ttccactggatgcacca 393
|||||||| ||||||||
Sbjct: 979316 ttccactgaatgcacca 979300
Score = 105 bits (53), Expect = 2e-19
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||||||||||||||||||||||||| || || ||||| || |||
Sbjct: 854295 ttctgcaacctccctgttaacatgtttaccacctttgtcattgagggtcgattttttggg 854236
Query: 377 ttccactggatgcacca 393
|||||||| ||||||||
Sbjct: 854235 ttccactgaatgcacca 854219
Score = 105 bits (53), Expect = 2e-19
Identities = 106/121 (87%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 554 ctcaccatttccaacaccaacattccaaaactgtacacatctgacttgtaagacacccct 613
||||||||||| || |||||||| || |||||||| ||||||||||||||||| | | |
Sbjct: 791119 ctcaccatttctaaaaccaacataccgaaactgtatacatctgacttgtaagatatcacc 791060
Query: 614 ccaaagttccgagagtatagcttctggtgccgatgtatcccattgtgcctcttgctgcag 673
|||||||||||||| || || |||||||| | ||||| ||||||||||||||||||||||
Sbjct: 791059 ccaaagttccgagaatacag-ttctggtg-caatgtagcccattgtgcctcttgctgcag 791002
Query: 674 t 674
|
Sbjct: 791001 t 791001
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 955584 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttctttggg 955525
Query: 377 ttccactggatgcaccacagccccacaatactcagctgtctcat 420
||||| || |||||||| || ||||||| ||||||||||||
Sbjct: 955524 ttccattgaatgcaccatagtgccacaatggccagctgtctcat 955481
Score = 103 bits (52), Expect = 7e-19
Identities = 129/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 518 tggttctcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacatt 577
||||||| || ||| || ||||||||||||| ||| || |||||||| ||||| | |||
Sbjct: 918418 tggttctgaatactcgggtctgagttcctccttccactaaccatttctaacacgagcatg 918359
Query: 578 ccaaaactgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttc 637
||||||||||| ||||||||||||||||| | | | |||||||||| ||| |||| | ||
Sbjct: 918358 ccaaaactgtatacatctgacttgtaagatatctccccaaagttcctagaatataac-tc 918300
Query: 638 tggtgccgatgtatcccattgtgcctcttgct 669
||||| | ||||| ||||||||||||||||||
Sbjct: 918299 tggtg-caatgtagcccattgtgcctcttgct 918269
Score = 101 bits (51), Expect = 3e-18
Identities = 128/151 (84%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 524 tcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaa 583
||||||||||| ||||| ||||||| ||| || |||||||| | |||| ||| || |||
Sbjct: 955377 tcaacacttgggtctgaattcctccttccactgaccatttctagtaccagcatgccgaaa 955318
Query: 584 ctgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgc 643
||||| ||||||||||||||||| | | | |||||||||||||| |||||| |||||||
Sbjct: 955317 ctgtaaacatctgacttgtaagatatctccccaaagttccgagaatatagc-tctggtg- 955260
Query: 644 cgatgtatcccattgtgcctcttgctgcagt 674
| || || ||||| |||||||||||||||||
Sbjct: 955259 caatatagcccatcgtgcctcttgctgcagt 955229
Score = 101 bits (51), Expect = 3e-18
Identities = 96/111 (86%)
Strand = Plus / Minus
Query: 283 agacgacacaaagggcttggggggaatctgcaggttctgcaacctccctgttaacatgtt 342
|||||| | ||||||||| ||||| | |||||| |||||||||||||| || ||||||||
Sbjct: 772521 agacgatataaagggcttagggggcacctgcagattctgcaacctccccgtcaacatgtt 772462
Query: 343 taccacctttgtcatcgatggccgattcttcgggttccactggatgcacca 393
||||||||||||||| || ||||| | || ||||||||||| ||||||||
Sbjct: 772461 taccacctttgtcattgagggccggtcttttgggttccactgaatgcacca 772411
Score = 99.6 bits (50), Expect = 1e-17
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| || || |||
Sbjct: 964096 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttatttggg 964037
Query: 377 ttccactggatgcaccacagccccacaatactcagctgtctc 418
|||||||| |||||||| || ||||||| ||||||||||
Sbjct: 964036 ttccactgaatgcaccatagtgccacaatggccagctgtctc 963995
Score = 91.7 bits (46), Expect = 3e-15
Identities = 100/118 (84%)
Strand = Plus / Minus
Query: 276 gattgtcagacgacacaaagggcttggggggaatctgcaggttctgcaacctccctgtta 335
|||| |||||||| | |||||||| || || | ||| || |||||||||||||| ||||
Sbjct: 846260 gattttcagacgaaatgaagggcttaggcggcacctgtagtttctgcaacctccccgtta 846201
Query: 336 acatgtttaccacctttgtcatcgatggccgattcttcgggttccactggatgcacca 393
|||||||||| |||||||||||||| ||||| || | ||||||||||| ||||||||
Sbjct: 846200 acatgtttactacctttgtcatcgagggccggtttgttgggttccactgaatgcacca 846143
Score = 89.7 bits (45), Expect = 1e-14
Identities = 131/157 (83%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 518 tggttctcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacatt 577
||||||||||| |||| |||| |||||||| || ||||||||||| ||||||| |||
Sbjct: 867807 tggttctcaacggttggttctgtgttcctcctcccactcaccatttctaacaccagcatg 867748
Query: 578 ccaaaactgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttc 637
||||| ||||| ||||| ||||| || || | ||||||| |||||||| ||||| |||
Sbjct: 867747 ccaaagctgtagacatccgacttatatgaaattgctccaaaattccgagaatatag-ttc 867689
Query: 638 tggtgccgatgtatcccattgtgcctcttgctgcagt 674
||||| | || || |||||||||||||||||||||||
Sbjct: 867688 tggtg-caatatagcccattgtgcctcttgctgcagt 867653
Score = 79.8 bits (40), Expect = 1e-11
Identities = 120/144 (83%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 531 ttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactgtaca 590
|||| |||| |||||||| || ||||||||||| ||||||| ||| ||||| ||||| |
Sbjct: 772273 ttgggtctgtgttcctcctcccactcaccatttctaacaccagcatgccaaagctgtaga 772214
Query: 591 catctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgccgatgta 650
|||| ||||| || || | ||||||| |||||||| ||||| |||||||| | || ||
Sbjct: 772213 catccgacttatatgaaattgctccaaaattccgagaatatag-ttctggtg-caatata 772156
Query: 651 tcccattgtgcctcttgctgcagt 674
|||||||||||||||||||||||
Sbjct: 772155 gcccattgtgcctcttgctgcagt 772132
Score = 75.8 bits (38), Expect = 2e-10
Identities = 130/158 (82%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 518 tggttctcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacatt 577
||||||||||| |||| |||| |||||||| || ||||||||||| ||||||| |||
Sbjct: 846018 tggttctcaacggttgggtctgtgttcctcctcccactcaccatttctaacaccagcatg 845959
Query: 578 ccaaaactgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttc 637
|| |||||||| ||||| |||||||| || | ||||||| ||||||| ||||| |||
Sbjct: 845958 ccgaaactgtagacatccgacttgtatgatattgctccaaaactccgagaatatag-ttc 845900
Query: 638 tggtgccgatgtatcccattgtgcctcttgctgcagtt 675
||||| | || || ||||| ||||| ||||||||||||
Sbjct: 845899 tggtg-caatataacccatcgtgccccttgctgcagtt 845863
Score = 71.9 bits (36), Expect = 3e-09
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 318 tctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcgggt 377
||||||| || ||||||| |||||| ||||||||| |||| ||||| ||||||| ||||
Sbjct: 717686 tctgcaagcttcctgttagcatgttgaccacctttttcatagatgggtgattcttggggt 717627
Query: 378 tccactggatgcacca 393
||||||| ||||||||
Sbjct: 717626 tccactgtatgcacca 717611
Score = 65.9 bits (33), Expect = 2e-07
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||| ||||||| ||||||||| ||||| |||||||| || || || | |||
Sbjct: 794358 ttctgcaaccttcctgttagcatgtttacaaccttcgtcatcgagggacggtttcttggg 794299
Query: 377 ttccactggatgcacca 393
|||||||| ||||||||
Sbjct: 794298 ttccactgaatgcacca 794282
Score = 65.9 bits (33), Expect = 2e-07
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 316 gttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcgg 375
|||||||||||| || |||| ||||||||| |||||||||| || |||||||| | ||
Sbjct: 736044 gttctgcaaccttccagttatcatgtttacagcctttgtcattgagggccgatttcttgg 735985
Query: 376 gttccactggatgcaccacag 396
||||||||| || ||||||||
Sbjct: 735984 gttccactgaatacaccacag 735964
Score = 61.9 bits (31), Expect = 3e-06
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||| || |||| ||||||||| ||||| |||||||| || || || | |||
Sbjct: 918619 ttctgcaaccttccagttagcatgtttacaaccttcgtcatcgagggacggtttcttggg 918560
Query: 377 ttccactggatgcaccaca 395
|||||||| ||||||||||
Sbjct: 918559 ttccactgaatgcaccaca 918541
Score = 60.0 bits (30), Expect = 1e-05
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 308 atctgcaggttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccga 367
|||||||| | ||||||||| ||||||| |||||| ||||||| ||| | |||||||
Sbjct: 791365 atctgcagatcctgcaaccttcctgttagcatgttaaccacctgggtcgttgatggcctg 791306
Query: 368 ttcttcgggttccactggatgcacca 393
|| || ||||||||||| ||||||||
Sbjct: 791305 tttttggggttccactgaatgcacca 791280
Score = 48.1 bits (24), Expect = 0.038
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||| || |||| ||||||||| ||||| ||||| | || || || | |||
Sbjct: 783530 ttctgcaaccttccagttagcatgtttacaaccttcgtcattgtgggacggtttcttggg 783471
Query: 377 ttccactggatgcaccacag 396
|||||||| |||||||||||
Sbjct: 783470 ttccactgaatgcaccacag 783451
Score = 46.1 bits (23), Expect = 0.15
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 571 caacattccaaaactgtacacatctgacttg 601
|||||||||||||||||| ||||| ||||||
Sbjct: 871877 caacattccaaaactgtaaacatcagacttg 871907
Score = 40.1 bits (20), Expect = 9.2
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 557 accatttccaacaccaacattccaaaactgtacacatctgactt 600
||||| || |||| || ||||||| ||||||| |||||||||||
Sbjct: 2016861 accatctctaacagcatcattccataactgtaaacatctgactt 2016818
>dbj|AP002747.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0698G03
Length = 147857
Score = 141 bits (71), Expect = 3e-30
Identities = 133/151 (88%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 524 tcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaa 583
||||||||||| ||||||||||||| |||||| |||||||| ||||||| ||| || |||
Sbjct: 135153 tcaacacttgggtctgagttcctccttccgctaaccatttctaacaccagcatgccgaaa 135094
Query: 584 ctgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgc 643
|| || ||||||||||||||||| | | ||||||||||||||||||||||| |||||||
Sbjct: 135093 ctataaacatctgacttgtaagatatctctccaaagttccgagagtatagc-tctggtg- 135036
Query: 644 cgatgtatcccattgtgcctcttgctgcagt 674
| || || ||||| |||||||||||||||||
Sbjct: 135035 caatatagcccatcgtgcctcttgctgcagt 135005
Score = 141 bits (71), Expect = 3e-30
Identities = 133/151 (88%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 524 tcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaa 583
||||||||||| ||||||||||||| ||||| |||||||| ||||||| ||| ||||||
Sbjct: 124830 tcaacacttgggtctgagttcctcctcccgctaaccatttctaacaccagcatgccaaaa 124771
Query: 584 ctgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgc 643
|| || ||||||||||||||||| | | |||||||||||||||| |||||| |||||||
Sbjct: 124770 ctataaacatctgacttgtaagatatctctccaaagttccgagaatatagc-tctggtg- 124713
Query: 644 cgatgtatcccattgtgcctcttgctgcagt 674
| || || |||||||||||||||||||||||
Sbjct: 124712 caatatagcccattgtgcctcttgctgcagt 124682
Score = 137 bits (69), Expect = 5e-29
Identities = 134/153 (87%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 522 tctcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaa 581
||||||||||||| || |||||||||| |||||| |||||||| || |||| ||| ||||
Sbjct: 114616 tctcaacacttgggtccgagttcctccttccgctaaccatttctaataccagcatgccaa 114557
Query: 582 aactgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggt 641
|||| || ||||||||||||||||| | | |||||||||||||||| |||||| ||||||
Sbjct: 114556 aactataaacatctgacttgtaagatatctctccaaagttccgagaatatagc-tctggt 114498
Query: 642 gccgatgtatcccattgtgcctcttgctgcagt 674
| | || || |||||||||||||||||||||||
Sbjct: 114497 g-caatatagcccattgtgcctcttgctgcagt 114466
Score = 133 bits (67), Expect = 8e-28
Identities = 132/151 (87%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 524 tcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaa 583
||||||||||| ||||||||||||| |||||| |||||||| ||||||| ||| || |||
Sbjct: 99334 tcaacacttgggtctgagttcctccttccgctaaccatttctaacaccagcatgccgaaa 99275
Query: 584 ctgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgc 643
|| || ||||||||||||||||| | | |||||||||||||||| |||||| |||||||
Sbjct: 99274 ctataaacatctgacttgtaagatatctctccaaagttccgagaatatagc-tctggtg- 99217
Query: 644 cgatgtatcccattgtgcctcttgctgcagt 674
| || || ||||| |||||||||||||||||
Sbjct: 99216 caatatagcccatcgtgcctcttgctgcagt 99186
Score = 119 bits (60), Expect = 1e-23
Identities = 93/104 (89%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 135360 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttctttggg 135301
Query: 377 ttccactggatgcaccacagccccacaatactcagctgtctcat 420
|||||||| ||||||||||| ||||||| ||||||||||||
Sbjct: 135300 ttccactgaatgcaccacagtgccacaatggccagctgtctcat 135257
Score = 107 bits (54), Expect = 5e-20
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 292 aaagggcttggggggaatctgcaggttctgcaacctccctgttaacatgtttaccacctt 351
||||||||| ||||| | |||||| |||||||||||||| || |||||||||||||||||
Sbjct: 3478 aaagggcttagggggcacctgcagattctgcaacctccccgtcaacatgtttaccacctt 3419
Query: 352 tgtcatcgatggccgattcttcgggttccactggatgcacca 393
|||||| || ||||| || || ||||||||||| ||||||||
Sbjct: 3418 tgtcattgagggccggttttttgggttccactgaatgcacca 3377
Score = 105 bits (53), Expect = 2e-19
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 125037 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttctttggg 124978
Query: 377 ttccactggatgcacca 393
|||||||| ||||||||
Sbjct: 124977 ttccactgaatgcacca 124961
Score = 105 bits (53), Expect = 2e-19
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 114821 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttctttggg 114762
Query: 377 ttccactggatgcacca 393
|||||||| ||||||||
Sbjct: 114761 ttccactgaatgcacca 114745
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 91029 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttctttggg 90970
Query: 377 ttccactggatgcaccacagccccacaatactcagctgtctcat 420
||||| || |||||||| || ||||||| ||||||||||||
Sbjct: 90969 ttccattgaatgcaccatagtgccacaatggccagctgtctcat 90926
Score = 103 bits (52), Expect = 7e-19
Identities = 129/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 518 tggttctcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacatt 577
||||||| || ||| || ||||||||||||| ||| || |||||||| ||||| | |||
Sbjct: 53863 tggttctgaatactcgggtctgagttcctccttccactaaccatttctaacacgagcatg 53804
Query: 578 ccaaaactgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttc 637
||||||||||| ||||||||||||||||| | | | |||||||||| ||| |||| | ||
Sbjct: 53803 ccaaaactgtatacatctgacttgtaagatatctccccaaagttcctagaatataac-tc 53745
Query: 638 tggtgccgatgtatcccattgtgcctcttgct 669
||||| | ||||| ||||||||||||||||||
Sbjct: 53744 tggtg-caatgtagcccattgtgcctcttgct 53714
Score = 101 bits (51), Expect = 3e-18
Identities = 128/151 (84%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 524 tcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaa 583
||||||||||| ||||| ||||||| ||| || |||||||| | |||| ||| || |||
Sbjct: 90822 tcaacacttgggtctgaattcctccttccactgaccatttctagtaccagcatgccgaaa 90763
Query: 584 ctgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgc 643
||||| ||||||||||||||||| | | | |||||||||||||| |||||| |||||||
Sbjct: 90762 ctgtaaacatctgacttgtaagatatctccccaaagttccgagaatatagc-tctggtg- 90705
Query: 644 cgatgtatcccattgtgcctcttgctgcagt 674
| || || ||||| |||||||||||||||||
Sbjct: 90704 caatatagcccatcgtgcctcttgctgcagt 90674
Score = 99.6 bits (50), Expect = 1e-17
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| || || |||
Sbjct: 99541 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttatttggg 99482
Query: 377 ttccactggatgcaccacagccccacaatactcagctgtctc 418
|||||||| |||||||| || ||||||| ||||||||||
Sbjct: 99481 ttccactgaatgcaccatagtgccacaatggccagctgtctc 99440
Score = 89.7 bits (45), Expect = 1e-14
Identities = 131/157 (83%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 518 tggttctcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacatt 577
||||||||||| |||| |||| |||||||| || ||||||||||| ||||||| |||
Sbjct: 3252 tggttctcaacggttggttctgtgttcctcctcccactcaccatttctaacaccagcatg 3193
Query: 578 ccaaaactgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttc 637
||||| ||||| ||||| ||||| || || | ||||||| |||||||| ||||| |||
Sbjct: 3192 ccaaagctgtagacatccgacttatatgaaattgctccaaaattccgagaatatag-ttc 3134
Query: 638 tggtgccgatgtatcccattgtgcctcttgctgcagt 674
||||| | || || |||||||||||||||||||||||
Sbjct: 3133 tggtg-caatatagcccattgtgcctcttgctgcagt 3098
Score = 61.9 bits (31), Expect = 3e-06
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||| || |||| ||||||||| ||||| |||||||| || || || | |||
Sbjct: 54064 ttctgcaaccttccagttagcatgtttacaaccttcgtcatcgagggacggtttcttggg 54005
Query: 377 ttccactggatgcaccaca 395
|||||||| ||||||||||
Sbjct: 54004 ttccactgaatgcaccaca 53986
Score = 46.1 bits (23), Expect = 0.15
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 571 caacattccaaaactgtacacatctgacttg 601
|||||||||||||||||| ||||| ||||||
Sbjct: 7322 caacattccaaaactgtaaacatcagacttg 7352
>dbj|AP002541.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0494A10
Length = 145576
Score = 141 bits (71), Expect = 3e-30
Identities = 133/151 (88%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 524 tcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaa 583
||||||||||| ||||||||||||| |||||| |||||||| ||||||| ||| || |||
Sbjct: 37376 tcaacacttgggtctgagttcctccttccgctaaccatttctaacaccagcatgccgaaa 37317
Query: 584 ctgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgc 643
|| || ||||||||||||||||| | | ||||||||||||||||||||||| |||||||
Sbjct: 37316 ctataaacatctgacttgtaagatatctctccaaagttccgagagtatagc-tctggtg- 37259
Query: 644 cgatgtatcccattgtgcctcttgctgcagt 674
| || || ||||| |||||||||||||||||
Sbjct: 37258 caatatagcccatcgtgcctcttgctgcagt 37228
Score = 141 bits (71), Expect = 3e-30
Identities = 133/151 (88%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 524 tcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaa 583
||||||||||| ||||||||||||| ||||| |||||||| ||||||| ||| ||||||
Sbjct: 27053 tcaacacttgggtctgagttcctcctcccgctaaccatttctaacaccagcatgccaaaa 26994
Query: 584 ctgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgc 643
|| || ||||||||||||||||| | | |||||||||||||||| |||||| |||||||
Sbjct: 26993 ctataaacatctgacttgtaagatatctctccaaagttccgagaatatagc-tctggtg- 26936
Query: 644 cgatgtatcccattgtgcctcttgctgcagt 674
| || || |||||||||||||||||||||||
Sbjct: 26935 caatatagcccattgtgcctcttgctgcagt 26905
Score = 137 bits (69), Expect = 5e-29
Identities = 134/153 (87%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 522 tctcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaa 581
||||||||||||| || |||||||||| |||||| |||||||| || |||| ||| ||||
Sbjct: 16839 tctcaacacttgggtccgagttcctccttccgctaaccatttctaataccagcatgccaa 16780
Query: 582 aactgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggt 641
|||| || ||||||||||||||||| | | |||||||||||||||| |||||| ||||||
Sbjct: 16779 aactataaacatctgacttgtaagatatctctccaaagttccgagaatatagc-tctggt 16721
Query: 642 gccgatgtatcccattgtgcctcttgctgcagt 674
| | || || |||||||||||||||||||||||
Sbjct: 16720 g-caatatagcccattgtgcctcttgctgcagt 16689
Score = 133 bits (67), Expect = 8e-28
Identities = 132/151 (87%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 524 tcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaa 583
||||||||||| ||||||||||||| |||||| |||||||| ||||||| ||| || |||
Sbjct: 1557 tcaacacttgggtctgagttcctccttccgctaaccatttctaacaccagcatgccgaaa 1498
Query: 584 ctgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgc 643
|| || ||||||||||||||||| | | |||||||||||||||| |||||| |||||||
Sbjct: 1497 ctataaacatctgacttgtaagatatctctccaaagttccgagaatatagc-tctggtg- 1440
Query: 644 cgatgtatcccattgtgcctcttgctgcagt 674
| || || ||||| |||||||||||||||||
Sbjct: 1439 caatatagcccatcgtgcctcttgctgcagt 1409
Score = 119 bits (60), Expect = 1e-23
Identities = 93/104 (89%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 37583 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttctttggg 37524
Query: 377 ttccactggatgcaccacagccccacaatactcagctgtctcat 420
|||||||| ||||||||||| ||||||| ||||||||||||
Sbjct: 37523 ttccactgaatgcaccacagtgccacaatggccagctgtctcat 37480
Score = 105 bits (53), Expect = 2e-19
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 27260 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttctttggg 27201
Query: 377 ttccactggatgcacca 393
|||||||| ||||||||
Sbjct: 27200 ttccactgaatgcacca 27184
Score = 105 bits (53), Expect = 2e-19
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 17044 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttctttggg 16985
Query: 377 ttccactggatgcacca 393
|||||||| ||||||||
Sbjct: 16984 ttccactgaatgcacca 16968
Score = 99.6 bits (50), Expect = 1e-17
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||| |||||| |||||||||||||| |||||||| || || |||
Sbjct: 1764 ttctgcaacctccctgttagcatgttcaccacctttgtcattgatggccggttatttggg 1705
Query: 377 ttccactggatgcaccacagccccacaatactcagctgtctc 418
|||||||| |||||||| || ||||||| ||||||||||
Sbjct: 1704 ttccactgaatgcaccatagtgccacaatggccagctgtctc 1663
>dbj|AP003219.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBb0032H19
Length = 126434
Score = 131 bits (66), Expect = 3e-27
Identities = 128/146 (87%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 529 acttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactgta 588
||||||||||||||||||| |||||||| |||||||||||| | ||| ||||||||| |
Sbjct: 103841 acttggatctgagttcctctttccgctcaacatttccaacactagcatgccaaaactgaa 103900
Query: 589 cacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgccgatg 648
||||||||||||||||| ||| | |||||||||| ||| ||||| ||| |||| | |||
Sbjct: 103901 aacatctgacttgtaagataccgcgccaaagttcctagaatatag-ttccggtg-caatg 103958
Query: 649 tatcccattgtgcctcttgctgcagt 674
|| |||||||||||||||||||||||
Sbjct: 103959 taacccattgtgcctcttgctgcagt 103984
Score = 107 bits (54), Expect = 5e-20
Identities = 161/194 (82%), Gaps = 2/194 (1%)
Strand = Plus / Minus
Query: 476 attactttctggtagatccactcagggagatacacctcgtcctggttctcaacacttgga 535
|||||||||| ||||||||||| || | || ||||| | |||||||||| ||||||
Sbjct: 119628 attactttctcatagatccactctggaaagtatacctcattttggttctcaatacttggg 119569
Query: 536 tctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactgtacacatct 595
|| || |||||| ||| ||||||||||| || || | ||| ||||||||||| ||||||
Sbjct: 119568 tcccagctcctccttccactcaccatttctaaaacaaccatgccaaaactgtaaacatct 119509
Query: 596 gacttgtaagacacccctccaaagttccgagagtatagcttctggtgccgatgtatccca 655
||||||||||| | | | |||||||||| ||| |||||| || |||| | ||||||||||
Sbjct: 119508 gacttgtaagatatctccccaaagttcctagaatatagc-tccggtg-caatgtatccca 119451
Query: 656 ttgtgcctcttgct 669
||||||||||||||
Sbjct: 119450 ttgtgcctcttgct 119437
Score = 71.9 bits (36), Expect = 3e-09
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 318 tctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcgggt 377
||||||| || ||||||| |||||| ||||||||| |||| ||||| ||||||| ||||
Sbjct: 101430 tctgcaagcttcctgttagcatgttgaccacctttttcatagatgggtgattcttggggt 101371
Query: 378 tccactggatgcacca 393
||||||| ||||||||
Sbjct: 101370 tccactgtatgcacca 101355
Score = 65.9 bits (33), Expect = 2e-07
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 316 gttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcgg 375
|||||||||||| || |||| ||||||||| |||||||||| || |||||||| | ||
Sbjct: 119788 gttctgcaaccttccagttatcatgtttacagcctttgtcattgagggccgatttcttgg 119729
Query: 376 gttccactggatgcaccacag 396
||||||||| || ||||||||
Sbjct: 119728 gttccactgaatacaccacag 119708
>dbj|AP003338.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OJ1212_B09
Length = 130728
Score = 129 bits (65), Expect = 1e-26
Identities = 307/385 (79%), Gaps = 2/385 (0%)
Strand = Plus / Minus
Query: 285 acgacacaaagggcttggggggaatctgcaggttctgcaacctccctgttaacatgttta 344
|||| ||||| ||||| ||||| | ||| | |||||||||||| || |||| ||||||||
Sbjct: 24746 acgaaacaaatggcttagggggcacctgtatgttctgcaaccttccagttatcatgttta 24687
Query: 345 ccacctttgtcatcgatggccgattcttcgggttccactggatgcaccacagccccacaa 404
| |||||||||||||| |||||||| | ||||||||||| || ||||| || ||||||
Sbjct: 24686 cgacctttgtcatcgagggccgatttcttgggttccactgaatacaccatagtgccacaa 24627
Query: 405 tactcagctgtctcatcttctccttgtcctctgctgtcatttccaaagtaagctcccaat 464
||||||||||| | | | || || ||| ||||||||||| | |||| | | |
Sbjct: 24626 gggccagctgtctcaccatttgtttctcttcttctgtcatttccctactaagtacgaact 24567
Query: 465 catgcccactgattactttctggtagatccactcagggagatacacctcgtcctggttct 524
| |||||| | |||||||||| |||||||| || |||| || ||||| | |||||||
Sbjct: 24566 cctgcccagtaattactttctcatagatccattctgggaagtatacctcattttggttct 24507
Query: 525 caacacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaac 584
|| |||||| || || |||||| ||| ||||||||||| ||||| | ||| |||||||
Sbjct: 24506 taatacttgggtcccagctcctccttccactcaccatttctaacacaagcatgccaaaac 24447
Query: 585 tgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgcc 644
| || |||||||||||||| || | | | |||||||||| ||| |||||| ||||||| |
Sbjct: 24446 tataaacatctgacttgtatgatatctccccaaagttcctagaatatagc-tctggtg-c 24389
Query: 645 gatgtatcccattgtgcctcttgct 669
||||||||||| ||||||||||||
Sbjct: 24388 aatgtatcccatcgtgcctcttgct 24364
Score = 117 bits (59), Expect = 5e-23
Identities = 169/203 (83%), Gaps = 2/203 (0%)
Strand = Plus / Minus
Query: 467 tgcccactgattactttctggtagatccactcagggagatacacctcgtcctggttctca 526
|||||| | |||||||||| ||||||||||| | | || ||||| | ||||| ||||
Sbjct: 71408 tgcccagtaattactttctcatagatccactccagaaagtagacctcattctggtcctca 71349
Query: 527 acacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactg 586
| |||||| ||||||||||||| ||| || |||||||| ||||| | ||| |||||||||
Sbjct: 71348 atacttgggtctgagttcctccttccactaaccatttctaacacaagcatgccaaaactg 71289
Query: 587 tacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgccga 646
|| || |||||||||||||| | | | |||||||||| ||| |||||| ||||||| | |
Sbjct: 71288 tatacgtctgacttgtaagatatctccccaaagttcctagaatatagc-tctggtg-caa 71231
Query: 647 tgtatcccattgtgcctcttgct 669
|||| ||||||||||||||||||
Sbjct: 71230 tgtagcccattgtgcctcttgct 71208
Score = 107 bits (54), Expect = 5e-20
Identities = 161/194 (82%), Gaps = 2/194 (1%)
Strand = Plus / Minus
Query: 476 attactttctggtagatccactcagggagatacacctcgtcctggttctcaacacttgga 535
|||||||||| ||||||||||| || | || ||||| | |||||||||| ||| ||
Sbjct: 60572 attactttctcatagatccactctggaaagtagacctcattttggttctcaatactcggg 60513
Query: 536 tctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactgtacacatct 595
|||||||| |||| ||| ||||||||||| ||||| | ||| |||||||| || ||||||
Sbjct: 60512 tctgagtttctccttccactcaccatttctaacacaagcatgccaaaactatatacatct 60453
Query: 596 gacttgtaagacacccctccaaagttccgagagtatagcttctggtgccgatgtatccca 655
||||||||||| | | | |||||||||| ||| |||||| ||||||| | ||||| ||||
Sbjct: 60452 gacttgtaagatatctccccaaagttcctagaatatagc-tctggtg-caatgtagccca 60395
Query: 656 ttgtgcctcttgct 669
| ||||||||||||
Sbjct: 60394 tcgtgcctcttgct 60381
Score = 107 bits (54), Expect = 5e-20
Identities = 161/194 (82%), Gaps = 2/194 (1%)
Strand = Plus / Minus
Query: 476 attactttctggtagatccactcagggagatacacctcgtcctggttctcaacacttgga 535
|||||||||| ||||||||||| || | || ||||| | |||||||||| ||||||
Sbjct: 13084 attactttctcatagatccactctggaaagtatacctcattttggttctcaatacttggg 13025
Query: 536 tctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactgtacacatct 595
|| || |||||| ||| ||||||||||| || || | ||| ||||||||||| ||||||
Sbjct: 13024 tcccagctcctccttccactcaccatttctaaaacaaccatgccaaaactgtaaacatct 12965
Query: 596 gacttgtaagacacccctccaaagttccgagagtatagcttctggtgccgatgtatccca 655
||||||||||| | | | |||||||||| ||| |||||| || |||| | ||||||||||
Sbjct: 12964 gacttgtaagatatctccccaaagttcctagaatatagc-tccggtg-caatgtatccca 12907
Query: 656 ttgtgcctcttgct 669
||||||||||||||
Sbjct: 12906 ttgtgcctcttgct 12893
Score = 105 bits (53), Expect = 2e-19
Identities = 106/121 (87%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 554 ctcaccatttccaacaccaacattccaaaactgtacacatctgacttgtaagacacccct 613
||||||||||| || |||||||| || |||||||| ||||||||||||||||| | | |
Sbjct: 68319 ctcaccatttctaaaaccaacataccgaaactgtatacatctgacttgtaagatatcacc 68260
Query: 614 ccaaagttccgagagtatagcttctggtgccgatgtatcccattgtgcctcttgctgcag 673
|||||||||||||| || || |||||||| | ||||| ||||||||||||||||||||||
Sbjct: 68259 ccaaagttccgagaatacag-ttctggtg-caatgtagcccattgtgcctcttgctgcag 68202
Query: 674 t 674
|
Sbjct: 68201 t 68201
Score = 101 bits (51), Expect = 3e-18
Identities = 96/111 (86%)
Strand = Plus / Minus
Query: 283 agacgacacaaagggcttggggggaatctgcaggttctgcaacctccctgttaacatgtt 342
|||||| | ||||||||| ||||| | |||||| |||||||||||||| || ||||||||
Sbjct: 49721 agacgatataaagggcttagggggcacctgcagattctgcaacctccccgtcaacatgtt 49662
Query: 343 taccacctttgtcatcgatggccgattcttcgggttccactggatgcacca 393
||||||||||||||| || ||||| | || ||||||||||| ||||||||
Sbjct: 49661 taccacctttgtcattgagggccggtcttttgggttccactgaatgcacca 49611
Score = 91.7 bits (46), Expect = 3e-15
Identities = 100/118 (84%)
Strand = Plus / Minus
Query: 276 gattgtcagacgacacaaagggcttggggggaatctgcaggttctgcaacctccctgtta 335
|||| |||||||| | |||||||| || || | ||| || |||||||||||||| ||||
Sbjct: 123460 gattttcagacgaaatgaagggcttaggcggcacctgtagtttctgcaacctccccgtta 123401
Query: 336 acatgtttaccacctttgtcatcgatggccgattcttcgggttccactggatgcacca 393
|||||||||| |||||||||||||| ||||| || | ||||||||||| ||||||||
Sbjct: 123400 acatgtttactacctttgtcatcgagggccggtttgttgggttccactgaatgcacca 123343
Score = 79.8 bits (40), Expect = 1e-11
Identities = 120/144 (83%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 531 ttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactgtaca 590
|||| |||| |||||||| || ||||||||||| ||||||| ||| ||||| ||||| |
Sbjct: 49473 ttgggtctgtgttcctcctcccactcaccatttctaacaccagcatgccaaagctgtaga 49414
Query: 591 catctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgccgatgta 650
|||| ||||| || || | ||||||| |||||||| ||||| |||||||| | || ||
Sbjct: 49413 catccgacttatatgaaattgctccaaaattccgagaatatag-ttctggtg-caatata 49356
Query: 651 tcccattgtgcctcttgctgcagt 674
|||||||||||||||||||||||
Sbjct: 49355 gcccattgtgcctcttgctgcagt 49332
Score = 75.8 bits (38), Expect = 2e-10
Identities = 130/158 (82%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 518 tggttctcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacatt 577
||||||||||| |||| |||| |||||||| || ||||||||||| ||||||| |||
Sbjct: 123218 tggttctcaacggttgggtctgtgttcctcctcccactcaccatttctaacaccagcatg 123159
Query: 578 ccaaaactgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttc 637
|| |||||||| ||||| |||||||| || | ||||||| ||||||| ||||| |||
Sbjct: 123158 ccgaaactgtagacatccgacttgtatgatattgctccaaaactccgagaatatag-ttc 123100
Query: 638 tggtgccgatgtatcccattgtgcctcttgctgcagtt 675
||||| | || || ||||| ||||| ||||||||||||
Sbjct: 123099 tggtg-caatataacccatcgtgccccttgctgcagtt 123063
Score = 65.9 bits (33), Expect = 2e-07
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||| ||||||| ||||||||| ||||| |||||||| || || || | |||
Sbjct: 71558 ttctgcaaccttcctgttagcatgtttacaaccttcgtcatcgagggacggtttcttggg 71499
Query: 377 ttccactggatgcacca 393
|||||||| ||||||||
Sbjct: 71498 ttccactgaatgcacca 71482
Score = 65.9 bits (33), Expect = 2e-07
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 316 gttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcgg 375
|||||||||||| || |||| ||||||||| |||||||||| || |||||||| | ||
Sbjct: 13244 gttctgcaaccttccagttatcatgtttacagcctttgtcattgagggccgatttcttgg 13185
Query: 376 gttccactggatgcaccacag 396
||||||||| || ||||||||
Sbjct: 13184 gttccactgaatacaccacag 13164
Score = 60.0 bits (30), Expect = 1e-05
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 308 atctgcaggttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccga 367
|||||||| | ||||||||| ||||||| |||||| ||||||| ||| | |||||||
Sbjct: 68565 atctgcagatcctgcaaccttcctgttagcatgttaaccacctgggtcgttgatggcctg 68506
Query: 368 ttcttcgggttccactggatgcacca 393
|| || ||||||||||| ||||||||
Sbjct: 68505 tttttggggttccactgaatgcacca 68480
Score = 48.1 bits (24), Expect = 0.038
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||| || |||| ||||||||| ||||| ||||| | || || || | |||
Sbjct: 60730 ttctgcaaccttccagttagcatgtttacaaccttcgtcattgtgggacggtttcttggg 60671
Query: 377 ttccactggatgcaccacag 396
|||||||| |||||||||||
Sbjct: 60670 ttccactgaatgcaccacag 60651
>dbj|AP002867.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0463F06
Length = 144322
Score = 117 bits (59), Expect = 5e-23
Identities = 169/203 (83%), Gaps = 2/203 (0%)
Strand = Plus / Minus
Query: 467 tgcccactgattactttctggtagatccactcagggagatacacctcgtcctggttctca 526
|||||| | |||||||||| ||||||||||| | | || ||||| | ||||| ||||
Sbjct: 16882 tgcccagtaattactttctcatagatccactccagaaagtagacctcattctggtcctca 16823
Query: 527 acacttggatctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactg 586
| |||||| ||||||||||||| ||| || |||||||| ||||| | ||| |||||||||
Sbjct: 16822 atacttgggtctgagttcctccttccactaaccatttctaacacaagcatgccaaaactg 16763
Query: 587 tacacatctgacttgtaagacacccctccaaagttccgagagtatagcttctggtgccga 646
|| || |||||||||||||| | | | |||||||||| ||| |||||| ||||||| | |
Sbjct: 16762 tatacgtctgacttgtaagatatctccccaaagttcctagaatatagc-tctggtg-caa 16705
Query: 647 tgtatcccattgtgcctcttgct 669
|||| ||||||||||||||||||
Sbjct: 16704 tgtagcccattgtgcctcttgct 16682
Score = 107 bits (54), Expect = 5e-20
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 292 aaagggcttggggggaatctgcaggttctgcaacctccctgttaacatgtttaccacctt 351
||||||||| ||||| | |||||| |||||||||||||| || |||||||||||||||||
Sbjct: 90707 aaagggcttagggggcacctgcagattctgcaacctccccgtcaacatgtttaccacctt 90648
Query: 352 tgtcatcgatggccgattcttcgggttccactggatgcacca 393
|||||| || ||||| || || ||||||||||| ||||||||
Sbjct: 90647 tgtcattgagggccggttttttgggttccactgaatgcacca 90606
Score = 107 bits (54), Expect = 5e-20
Identities = 161/194 (82%), Gaps = 2/194 (1%)
Strand = Plus / Minus
Query: 476 attactttctggtagatccactcagggagatacacctcgtcctggttctcaacacttgga 535
|||||||||| ||||||||||| || | || ||||| | |||||||||| ||| ||
Sbjct: 6046 attactttctcatagatccactctggaaagtagacctcattttggttctcaatactcggg 5987
Query: 536 tctgagttcctccgtccgctcaccatttccaacaccaacattccaaaactgtacacatct 595
|||||||| |||| ||| ||||||||||| ||||| | ||| |||||||| || ||||||
Sbjct: 5986 tctgagtttctccttccactcaccatttctaacacaagcatgccaaaactatatacatct 5927
Query: 596 gacttgtaagacacccctccaaagttccgagagtatagcttctggtgccgatgtatccca 655
||||||||||| | | | |||||||||| ||| |||||| ||||||| | ||||| ||||
Sbjct: 5926 gacttgtaagatatctccccaaagttcctagaatatagc-tctggtg-caatgtagccca 5869
Query: 656 ttgtgcctcttgct 669
| ||||||||||||
Sbjct: 5868 tcgtgcctcttgct 5855
Score = 105 bits (53), Expect = 2e-19
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||||||||||||||||||||||||||||||||| || || ||||| || |||
Sbjct: 76969 ttctgcaacctccctgttaacatgtttaccacctttgtcattgagggtcgattttttggg 76910
Query: 377 ttccactggatgcacca 393
|||||||| ||||||||
Sbjct: 76909 ttccactgaatgcacca 76893
Score = 105 bits (53), Expect = 2e-19
Identities = 106/121 (87%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 554 ctcaccatttccaacaccaacattccaaaactgtacacatctgacttgtaagacacccct 613
||||||||||| || |||||||| || |||||||| ||||||||||||||||| | | |
Sbjct: 13793 ctcaccatttctaaaaccaacataccgaaactgtatacatctgacttgtaagatatcacc 13734
Query: 614 ccaaagttccgagagtatagcttctggtgccgatgtatcccattgtgcctcttgctgcag 673
|||||||||||||| || || |||||||| | ||||| ||||||||||||||||||||||
Sbjct: 13733 ccaaagttccgagaatacag-ttctggtg-caatgtagcccattgtgcctcttgctgcag 13676
Query: 674 t 674
|
Sbjct: 13675 t 13675
Score = 103 bits (52), Expect = 7e-19
Identities = 129/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 518 tggttctcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacatt 577
||||||| || ||| || ||||||||||||| ||| || |||||||| ||||| | |||
Sbjct: 141092 tggttctgaatactcgggtctgagttcctccttccactaaccatttctaacacgagcatg 141033
Query: 578 ccaaaactgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttc 637
||||||||||| ||||||||||||||||| | | | |||||||||| ||| |||| | ||
Sbjct: 141032 ccaaaactgtatacatctgacttgtaagatatctccccaaagttcctagaatataac-tc 140974
Query: 638 tggtgccgatgtatcccattgtgcctcttgct 669
||||| | ||||| ||||||||||||||||||
Sbjct: 140973 tggtg-caatgtagcccattgtgcctcttgct 140943
Score = 91.7 bits (46), Expect = 3e-15
Identities = 100/118 (84%)
Strand = Plus / Minus
Query: 276 gattgtcagacgacacaaagggcttggggggaatctgcaggttctgcaacctccctgtta 335
|||| |||||||| | |||||||| || || | ||| || |||||||||||||| ||||
Sbjct: 68934 gattttcagacgaaatgaagggcttaggcggcacctgtagtttctgcaacctccccgtta 68875
Query: 336 acatgtttaccacctttgtcatcgatggccgattcttcgggttccactggatgcacca 393
|||||||||| |||||||||||||| ||||| || | ||||||||||| ||||||||
Sbjct: 68874 acatgtttactacctttgtcatcgagggccggtttgttgggttccactgaatgcacca 68817
Score = 89.7 bits (45), Expect = 1e-14
Identities = 131/157 (83%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 518 tggttctcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacatt 577
||||||||||| |||| |||| |||||||| || ||||||||||| ||||||| |||
Sbjct: 90481 tggttctcaacggttggttctgtgttcctcctcccactcaccatttctaacaccagcatg 90422
Query: 578 ccaaaactgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttc 637
||||| ||||| ||||| ||||| || || | ||||||| |||||||| ||||| |||
Sbjct: 90421 ccaaagctgtagacatccgacttatatgaaattgctccaaaattccgagaatatag-ttc 90363
Query: 638 tggtgccgatgtatcccattgtgcctcttgctgcagt 674
||||| | || || |||||||||||||||||||||||
Sbjct: 90362 tggtg-caatatagcccattgtgcctcttgctgcagt 90327
Score = 75.8 bits (38), Expect = 2e-10
Identities = 130/158 (82%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 518 tggttctcaacacttggatctgagttcctccgtccgctcaccatttccaacaccaacatt 577
||||||||||| |||| |||| |||||||| || ||||||||||| ||||||| |||
Sbjct: 68692 tggttctcaacggttgggtctgtgttcctcctcccactcaccatttctaacaccagcatg 68633
Query: 578 ccaaaactgtacacatctgacttgtaagacacccctccaaagttccgagagtatagcttc 637
|| |||||||| ||||| |||||||| || | ||||||| ||||||| ||||| |||
Sbjct: 68632 ccgaaactgtagacatccgacttgtatgatattgctccaaaactccgagaatatag-ttc 68574
Query: 638 tggtgccgatgtatcccattgtgcctcttgctgcagtt 675
||||| | || || ||||| ||||| ||||||||||||
Sbjct: 68573 tggtg-caatataacccatcgtgccccttgctgcagtt 68537
Score = 65.9 bits (33), Expect = 2e-07
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||| ||||||| ||||||||| ||||| |||||||| || || || | |||
Sbjct: 17032 ttctgcaaccttcctgttagcatgtttacaaccttcgtcatcgagggacggtttcttggg 16973
Query: 377 ttccactggatgcacca 393
|||||||| ||||||||
Sbjct: 16972 ttccactgaatgcacca 16956
Score = 61.9 bits (31), Expect = 3e-06
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||| || |||| ||||||||| ||||| |||||||| || || || | |||
Sbjct: 141293 ttctgcaaccttccagttagcatgtttacaaccttcgtcatcgagggacggtttcttggg 141234
Query: 377 ttccactggatgcaccaca 395
|||||||| ||||||||||
Sbjct: 141233 ttccactgaatgcaccaca 141215
Score = 60.0 bits (30), Expect = 1e-05
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 308 atctgcaggttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccga 367
|||||||| | ||||||||| ||||||| |||||| ||||||| ||| | |||||||
Sbjct: 14039 atctgcagatcctgcaaccttcctgttagcatgttaaccacctgggtcgttgatggcctg 13980
Query: 368 ttcttcgggttccactggatgcacca 393
|| || ||||||||||| ||||||||
Sbjct: 13979 tttttggggttccactgaatgcacca 13954
Score = 48.1 bits (24), Expect = 0.038
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 317 ttctgcaacctccctgttaacatgtttaccacctttgtcatcgatggccgattcttcggg 376
||||||||||| || |||| ||||||||| ||||| ||||| | || || || | |||
Sbjct: 6204 ttctgcaaccttccagttagcatgtttacaaccttcgtcattgtgggacggtttcttggg 6145
Query: 377 ttccactggatgcaccacag 396
|||||||| |||||||||||
Sbjct: 6144 ttccactgaatgcaccacag 6125
Score = 46.1 bits (23), Expect = 0.15
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 571 caacattccaaaactgtacacatctgacttg 601
|||||||||||||||||| ||||| ||||||
Sbjct: 94551 caacattccaaaactgtaaacatcagacttg 94581
>emb|AL591209.17 | Mouse DNA sequence from clone RP23-309H19 on chromosome 11, complete
sequence
Length = 199634
Score = 40.1 bits (20), Expect = 9.2
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 322 caacctccctgttaacatgt 341
||||||||||||||||||||
Sbjct: 146470 caacctccctgttaacatgt 146451
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,783,255
Number of Sequences: 3902068
Number of extensions: 5783255
Number of successful extensions: 105414
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104945
Number of HSP's gapped (non-prelim): 371
length of query: 675
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 652
effective length of database: 17,143,297,704
effective search space: 11177430103008
effective search space used: 11177430103008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)