ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal40e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase i... 40 0.001
2IBB1_ARAHY (P01066) Bowman-Birk type proteinase inhibitor A-II [... 33 0.12
3PKSJ_BACSU (P40806) Putative polyketide synthase pksJ (PKS) 32 0.36
4IBBA_PEA (Q41065) Seed trypsin/chymotrypsin inhibitor IVA precur... 31 0.80
5LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor 31 0.80
6PRIA_LENED (Q01200) Protein priA precursor 30 1.0
7LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor 30 1.8
8RS4_METTH (O26142) 30S ribosomal protein S4P 29 2.3
9IBBB_PEA (P56679) Seed trypsin/chymotrypsin inhibitor IVB (PSTI-... 29 2.3
10LRP1_CHICK (P98157) Low-density lipoprotein receptor-related pro... 29 2.3
11RECQ5_HUMAN (O94762) ATP-dependent DNA helicase Q5 (EC 3.6.1.-) ... 29 3.0
12MT_ASTFL (P55951) Metallothionein (MT) 28 4.0
13IBB2_ARAHY (P01067) Bowman-Birk type proteinase inhibitor B-II 28 4.0
14YOW6_CAEEL (P30652) Hypothetical protein ZK643.6 precursor 28 5.2
15OX1R_HUMAN (O43613) Orexin receptor type 1 (Ox1r) (Hypocretin re... 28 5.2
16EMBA_MYCSM (Q50394) Probable arabinosyltransferase A (EC 2.4.2.-) 27 8.8
17MTB_CARCW (Q8AWG1) Metallothionein B (MT-B) 27 8.8
18IBB_MEDSC (P80321) Bowman-Birk type proteinase inhibitor (MSTI) 27 8.8
19IBB1_SOYBN (P01055) Bowman-Birk type proteinase inhibitor precur... 27 8.8
20QUTA_EMENI (P10563) Quinic acid utilization activator 27 8.8
21CRVP2_NAJAT (Q7ZZN8) Natrin-2 precursor (Cysteine-rich venom pro... 27 8.8

>IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase inhibitor WIP1|
           precursor
          Length = 102

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
 Frame = -2

Query: 370 CNNCR-SFSGVDVCDDAHPQCPTGCSACRVVT----TNPQTFRCADMKATVDGTCGGPC 209
           C NC  SFSG+  CDD    C   C  C V      +    FRC D   T  G CG  C
Sbjct: 47  CTNCNFSFSGLYTCDDVKKDCDPVCKKCVVAVHASYSGNNKFRCTD---TFLGMCGPKC 102



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>IBB1_ARAHY (P01066) Bowman-Birk type proteinase inhibitor A-II [Contains:|
           Bowman-Birk type proteinase inhibitor A-I; Bowman-Birk
           type proteinase inhibitor B-I; Bowman-Birk type
           proteinase inhibitor B-III]
          Length = 70

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 337 VCDDAHPQCPTGCSACRVVTTNPQTFRCAD 248
           VC D    CP  C++C    +NP   RC D
Sbjct: 28  VCVDTFDHCPASCNSCVCTRSNPPQCRCTD 57



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>PKSJ_BACSU (P40806) Putative polyketide synthase pksJ (PKS)|
          Length = 5045

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +3

Query: 222  QVPSTVAFMSAQRNVWGFVV---TTRHAEQPVGHCGWASSQTST 344
            Q+P T  FMSA  N +  ++   TT   E P G+  W  +Q+ T
Sbjct: 1869 QIPQTSVFMSASNNSYRALLPSDTTESLETPDGYVSWVLAQSGT 1912



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>IBBA_PEA (Q41065) Seed trypsin/chymotrypsin inhibitor IVA precursor (PSTI|
           IVA) (TI12-36) [Contains: Seed trypsin/chymotrypsin
           inhibitor I (PSTI I)] (Fragment)
          Length = 96

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -2

Query: 331 DDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTC 221
           DD    C   C  C    +NP T RC D++ T    C
Sbjct: 26  DDVKSAC---CDTCLCTKSNPPTCRCVDVRETCHSAC 59



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>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 8/59 (13%)
 Frame = -2

Query: 364  NCRSFS-GVDVCDDAHPQC-------PTGCSACRVVTTNPQTFRCADMKATVDGTCGGP 212
            NCR    G  +CD+   QC       P  C  C+     PQTF C  +    +  C GP
Sbjct: 1480 NCRPCDCGARLCDELTGQCICPPRTIPPDCLLCQ-----PQTFGCHPLVGCEECNCSGP 1533



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>PRIA_LENED (Q01200) Protein priA precursor|
          Length = 258

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 325 AHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGG 215
           A P CP G  AC +  ++   + C D  A ++ +CGG
Sbjct: 176 AVPACPKGLDACPIAGSSLGDYECLDTSAELE-SCGG 211



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>LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor|
          Length = 3718

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 8/59 (13%)
 Frame = -2

Query: 364  NCRSFS-GVDVCDDAHPQC-------PTGCSACRVVTTNPQTFRCADMKATVDGTCGGP 212
            NCR    G  +CD+   QC       P  C  C+     PQ+F C  +    +  C GP
Sbjct: 1485 NCRPCDCGARLCDELTGQCICPPRTVPPDCLVCQ-----PQSFGCHPLVGCEECNCSGP 1538



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>RS4_METTH (O26142) 30S ribosomal protein S4P|
          Length = 171

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
 Frame = +3

Query: 3   LLSRHAQYSRGIFLEKETTVTKTRRNSIHIVG----HTHTHRQDESGHLIRAFIL--GAK 164
           L++++   ++    + ET V + RR++ +++G    HT   R+   GHL+R  IL  GAK
Sbjct: 29  LVAKYGLKNKKEVWKAETMVRRYRRDARYLLGMASEHTGKEREQLLGHLVRTGILNEGAK 88

Query: 165 RNNSL 179
             + L
Sbjct: 89  LEDVL 93



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>IBBB_PEA (P56679) Seed trypsin/chymotrypsin inhibitor IVB (PSTI-IVB)|
           [Contains: Seed trypsin/chymotrypsin inhibitor II (PSTI
           II)]
          Length = 72

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = -2

Query: 331 DDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTC 221
           DD    C   C  C    +NP T RC D+  T    C
Sbjct: 2   DDVKSAC---CDTCLCTKSNPPTCRCVDVGETCHSAC 35



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>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
          Length = 4543

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -2

Query: 370  CNNCRSFSGVDVCDDAHPQCPTGC---SACRVVTTNPQTFRC 254
            CNN R  S + VCD A   C  G    S CR+ T +  +F+C
Sbjct: 2739 CNNHRCISKLWVCDGA-DDCGDGSDEDSRCRLTTCSTGSFQC 2779



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>RECQ5_HUMAN (O94762) ATP-dependent DNA helicase Q5 (EC 3.6.1.-) (RecQ|
           protein-like 5) (RecQ5)
          Length = 991

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
 Frame = -2

Query: 388 DYFPTXCNN--CRSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGG 215
           D   T C    CR  +      DA P C  GC  C+  T   +     +  ++   TC G
Sbjct: 400 DALVTFCEELGCRHAAIAKYFGDALPACAKGCDHCQNPTAVRRRLEALERSSSWSKTCIG 459

Query: 214 P 212
           P
Sbjct: 460 P 460



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>MT_ASTFL (P55951) Metallothionein (MT)|
          Length = 58

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = -2

Query: 340 DVCDDAHPQCPTG--CSACRVVTTNPQTFRC-ADMKATVDGTCGGPCK 206
           DVC+ A   C TG  C++CR    +  T  C    K     TC  PC+
Sbjct: 8   DVCECAAGGCKTGCVCTSCRCSPCDKCTSGCKCPSKEECAKTCSKPCE 55



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>IBB2_ARAHY (P01067) Bowman-Birk type proteinase inhibitor B-II|
          Length = 63

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -2

Query: 334 CDDAHPQCPTGCSACRVVTTNPQTFRCAD 248
           C D    CP  C+ C    + P   RC D
Sbjct: 23  CGDTFDHCPAACNKCVCTRSIPPQCRCTD 51



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>YOW6_CAEEL (P30652) Hypothetical protein ZK643.6 precursor|
          Length = 180

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -2

Query: 379 PTXCNNCRSF-SGVDVCDDAHPQCPTGCSACRVVTTNPQ 266
           P  C N ++  + V+  D    QCP+ C+ C    TNP+
Sbjct: 55  PDICVNLKTLCNSVEFYDKLSEQCPSTCNRCPHNGTNPE 93



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>OX1R_HUMAN (O43613) Orexin receptor type 1 (Ox1r) (Hypocretin receptor type 1)|
          Length = 425

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 323 PSAVPHRLLGVPRGDHEPPDVP 258
           PSA P   +GVP G  EP  VP
Sbjct: 3   PSATPGAQMGVPPGSREPSPVP 24



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>EMBA_MYCSM (Q50394) Probable arabinosyltransferase A (EC 2.4.2.-)|
          Length = 1092

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
 Frame = +1

Query: 109 RIGKMSPVISSELLF*APSGTIVSCEPEPIST---XXXXXXXXXXXXXXXXXXGTSGGSW 279
           R G   P+   + +   PSG     EPEP+ T                     G +GG +
Sbjct: 755 RFGDYGPLGGEDPVGFTPSGVSEHLEPEPVGTNPGTPNSEGPVDKPNIGIAYAGDTGGGY 814

Query: 280 SPRGTPSSR 306
           +P G   SR
Sbjct: 815 APEGVNGSR 823



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>MTB_CARCW (Q8AWG1) Metallothionein B (MT-B)|
          Length = 60

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = -2

Query: 370 CNNCRSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGGPC 209
           C NC+  +    C    P CP+GCS            +CA      D +CG  C
Sbjct: 20  CTNCQCKTCKKSCC---PCCPSGCS------------KCASGCVCKDNSCGSSC 58



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>IBB_MEDSC (P80321) Bowman-Birk type proteinase inhibitor (MSTI)|
          Length = 62

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = -2

Query: 370 CNNCRSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADM 245
           C   RS      C D   +C + C +C    + P   RC D+
Sbjct: 12  CPCTRSIPPQCQCTDVREKCHSACKSCLCTRSFPPQCRCYDI 53



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>IBB1_SOYBN (P01055) Bowman-Birk type proteinase inhibitor precursor (BBI)|
          Length = 110

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -2

Query: 331 DDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGGPCK 206
           D++   C   C  C    +NP   RC+DM+     +C   CK
Sbjct: 41  DESSKPC---CDQCACTKSNPPQCRCSDMRL---NSCHSACK 76



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>QUTA_EMENI (P10563) Quinic acid utilization activator|
          Length = 825

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 370 CNNCRSFSGVDVCDDAHPQCPTGCSACRVVT--TNPQ 266
           C++CRS    D CD A P C T  S  R  T   NP+
Sbjct: 49  CDSCRSKK--DKCDGAQPICSTCASLSRPCTYRANPK 83



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>CRVP2_NAJAT (Q7ZZN8) Natrin-2 precursor (Cysteine-rich venom protein 2)|
           (NA-CRVP2) (Protein G2b)
          Length = 238

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
 Frame = -2

Query: 361 CRSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADM-KATVDGTCGGPCKKY 200
           C S   + VC      CPTG     + T       C D   A V+G C  PCK +
Sbjct: 153 CSSSKYLYVCQ----YCPTGNIIGSIATPYKSGPPCGDCPSACVNGLCTNPCKHH 203


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,454,992
Number of Sequences: 219361
Number of extensions: 1100055
Number of successful extensions: 3083
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3078
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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