>emb|Z48729.1|HVBSI1 H.vulgare Bsi1 gene for putative protease inhibitor
          Length = 498

 Score =  729 bits (368), Expect = 0.0
 Identities = 405/413 (98%), Gaps = 6/413 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgttattgagtagacacgcacaatattcacgggggatatttctcgagaaagaaaccacgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tgttattgagtagacacgcacaatattcacgggggatatttctcgagaaagaaaccacgg 419

                                                                       
Query: 61  tgacaaagacacgacggaacagtatacatattgttg---gccacacacacacgcataggc 117
           ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||
Sbjct: 418 tgacaaagacacgacggaacagtatacatattgttgttggccacacacacacgcataggc 359

                                                                       
Query: 118 aagatgagtccggtcatctcatccgagcttttattttaggcgccaagcggaacaatagtc 177
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 358 aagatgagtccggtcatctcatccgagcttttattttaggcgccaagcg-aacaatagtc 300

                                                                       
Query: 178 tcatgtgagcctgagccgatcagtacttcttgcatggcccgccgcaggtgccgtcgacgg 237
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tcatgtgagcctgagc-gatcagtacttcttgcatggcccgccgcaggtgccgtcgacgg 241

                                                                       
Query: 238 tggctttcatgtcggcgcagcggaacgtctgggggttcgtggtcaccacgcggcacgccg 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tggctttcatgtcggcgcagcggaacgtctgggggttcgtggtcaccacgcggcacgccg 181

                                                                       
Query: 298 agcagccggtggggcactgcggatgggcgtcgtcgcagacgtcgaccccggagaaggacc 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agcagccggtggggcactgcggatgggcgtcgtcgcagacgtcgaccccggagaaggacc 121

                                                                
Query: 358 tgcagttgttgcagnacgtggggaaatagtcggcgtttcacgtgcgagaggac 410
           |||||||||||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 120 tgcagttgttgcagcacgtggggaaatagacggcg-ttcacgtgcgagaggac 69

>gb|AY549888.2| Triticum aestivum putative proteinase inhibitor-related protein
           (wrsi5-1) mRNA, complete cds
          Length = 608

 Score =  216 bits (109), Expect = 4e-53
 Identities = 192/218 (88%), Gaps = 4/218 (1%)
 Strand = Plus / Minus

                                                                       
Query: 195 gatcagtacttcttgcatggcccgccgcaggtgccgtcgacggtggctttcatgtcggcg 254
           ||||||| ||| ||||||||||||||||||||||| |||||||||   ||||||||||||
Sbjct: 361 gatcagtgctttttgcatggcccgccgcaggtgccatcgacggtgctcttcatgtcggcg 302

                                                                       
Query: 255 cagcggaacgtctgg---gggttcgtggtcaccacgcggcacgccgagcagccggtgggg 311
           || |||||||||| |   ||| | |  |||||||||||||| |||||||||||  |||||
Sbjct: 301 caccggaacgtcttgtgagggctgggcgtcaccacgcggcaggccgagcagcccttgggg 242

                                                                       
Query: 312 cactgcggatgggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcag 371
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cactgggggtgggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcag 182

                                                 
Query: 372 nacgtggggaaatagtcggcgtttcacgtgcgagagga 409
            || |||||||  |||||||| |||||||| |||||||
Sbjct: 181 cacttggggaagaagtcggcg-ttcacgtgtgagagga 145



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 80  cagtatacatattgttggcc 99
           ||||||||||||||||||||
Sbjct: 482 cagtatacatattgttggcc 463

>gb|L11882.1|WHTWALI5A Triticum aestivum protein of unknown function (wali5) mRNA,
           complete cds
          Length = 520

 Score =  202 bits (102), Expect = 6e-49
 Identities = 189/217 (87%), Gaps = 1/217 (0%)
 Strand = Plus / Minus

                                                                       
Query: 193 ccgatcagtacttcttgcatggcccgccgcaggtgccgtcgacggtggctttcatgtcgg 252
           ||||||||||||||||||| || || |||||||||||||||||||||| |||||| || |
Sbjct: 346 ccgatcagtacttcttgcagggtccaccgcaggtgccgtcgacggtggatttcatatccg 287

                                                                       
Query: 253 cgcagcggaacgtctgggggttcgtggtcaccacgcggcacgccgagcagccggtggggc 312
           |||||||  || | | |||| |||| | ||||||||||||||||||||||||   ||| |
Sbjct: 286 cgcagcgccacatttcggggctcgtcgacaccacgcggcacgccgagcagccctggggac 227

                                                                       
Query: 313 actgcggatgggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcagn 372
           |||  || |||||||||||||||||||||||||| |||||||||||||||||||||||| 
Sbjct: 226 acttggggtgggcgtcgtcgcagacgtcgacccccgagaaggacctgcagttgttgcagc 167

                                                
Query: 373 acgtggggaaatagtcggcgtttcacgtgcgagagga 409
           || |||||||| | |||||| |||||||| |||||||
Sbjct: 166 acttggggaaaaaatcggcg-ttcacgtgtgagagga 131



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                       
Query: 90  attgttggccacacacacacgcataggcaagatgagtccggtcatctcatccgagctttt 149
           ||||||||||||||||||||||||||||| |||||  | | |||||||  | ||||||||
Sbjct: 443 attgttggccacacacacacgcataggcacgatgacgctgctcatctcgcctgagctttt 384

                 
Query: 150 atttta 155
           ||||||
Sbjct: 383 atttta 378

>gb|L28009.1|WHTWALIA Triticum aestivum (wali6) mRNA, complete cds
          Length = 585

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 323 ggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcag 371
           |||||||||||||||  || |||| |||||| |||||||||||| ||||
Sbjct: 216 ggcgtcgtcgcagaccacggcccccgagaagaacctgcagttgtcgcag 168

>gb|L11881.1|WHTWALI3A Triticum aestivum protein of unknown function (wali3) mRNA,
           complete cds
          Length = 564

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 323 ggcgtcgtcgcagacgtcgaccccggagaaggacctgcagttgttgcagnacgtggggaa 382
           |||||| ||||||||  || |||| |||||| |||||||||||| |||| || |||||||
Sbjct: 195 ggcgtcatcgcagaccacggcccccgagaagaacctgcagttgtcgcagcacttggggaa 136

>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
             sequence; splicing factor SF2-like protein (SF2) and
             universal stress protein (USP1) genes and Hv
             receptor-kinase-like pseudogene, complete cds; and
             retrotransposons Sandra6 and Sandra7, complete sequence
          Length = 82293

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 287   gcggcacgccgagcagccggtggggcac 314
             |||||||||||||||||||| |||||||
Sbjct: 72099 gcggcacgccgagcagccggcggggcac 72072

>gb|AY618464.1| Glomerella graminicola isolate 43 18S ribosomal RNA gene, partial
           sequence
          Length = 518

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 339 tcgaccccggagaaggacctg 359
           |||||||||||||||||||||
Sbjct: 176 tcgaccccggagaaggacctg 156

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 88      atattgttggccacacacaca 108
               |||||||||||||||||||||
Sbjct: 1152449 atattgttggccacacacaca 1152429

>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0660D08
          Length = 146915

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 88     atattgttggccacacacaca 108
              |||||||||||||||||||||
Sbjct: 128672 atattgttggccacacacaca 128652

>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0542E10
          Length = 146196

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 88   atattgttggccacacacaca 108
            |||||||||||||||||||||
Sbjct: 4402 atattgttggccacacacaca 4382

>emb|Z94139.1| Plectosphaerella sp. C99 partial 18S rRNA gene, strain C99
          Length = 421

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 339 tcgaccccggagaaggacctg 359
           |||||||||||||||||||||
Sbjct: 323 tcgaccccggagaaggacctg 343

>ref|XM_580317.2| PREDICTED: Bos taurus collagen, type IV, alpha 1 (COL4A1), mRNA
          Length = 4920

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  cagccggtggggcactgcgg 319
            ||||||||||||||||||||
Sbjct: 4709 cagccggtggggcactgcgg 4690

>gb|AC154691.3| Mus musculus BAC clone RP24-336F24 from chromosome 16, complete
             sequence
          Length = 178904

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    cacacacacacgcataggca 118
             ||||||||||||||||||||
Sbjct: 63255 cacacacacacgcataggca 63274

>gb|AC073621.20| Homo sapiens chromosome 17, clone CTD-3073J20, complete sequence
          Length = 141048

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     cacacacacacgcataggca 118
              ||||||||||||||||||||
Sbjct: 109683 cacacacacacgcataggca 109702

>gb|AC161614.4| Pan troglodytes BAC clone CH251-575E11 from chromosome unknown,
             complete sequence
          Length = 172771

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    tggccacacacacacgcata 114
             ||||||||||||||||||||
Sbjct: 67893 tggccacacacacacgcata 67874

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 244    tcatgtcggcgcagcggaac 263
              ||||||||||||||||||||
Sbjct: 807692 tcatgtcggcgcagcggaac 807673

>gb|AF042096.3|AF042096 Bradyrhizobium japonicum UbiE (ubiE) gene, partial cds; AarF (aarF),
            panthotenate metabolism flavoprotein (dfp),
            deoxyuridine-triphosphatase (dut), putative sensor
            protein (bdfA), GalF-like (galF), hypothetical protein
            genes, complete cds; putative helicase 2 gene, partial
            cds; and unknown genes
          Length = 13289

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  tcatgtcggcgcagcggaac 263
            ||||||||||||||||||||
Sbjct: 8347 tcatgtcggcgcagcggaac 8366

>dbj|AP000841.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-89J9, complete
             sequence
          Length = 103177

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    cacacacacacgcataggca 118
             ||||||||||||||||||||
Sbjct: 15051 cacacacacacgcataggca 15070

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    gcggcacgccgagcagccgg 306
              ||||||||||||||||||||
Sbjct: 369398 gcggcacgccgagcagccgg 369417

>gb|AC122763.9| Mus musculus chromosome 19, clone RP24-68F2, complete sequence
          Length = 176325

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     cacacacacacgcataggca 118
              ||||||||||||||||||||
Sbjct: 134602 cacacacacacgcataggca 134621

>dbj|AP003150.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-215C1, complete
              sequences
          Length = 150724

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     cacacacacacgcataggca 118
              ||||||||||||||||||||
Sbjct: 127484 cacacacacacgcataggca 127465

>dbj|AP003148.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-190J24, complete
            sequences
          Length = 172173

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   cacacacacacgcataggca 118
            ||||||||||||||||||||
Sbjct: 9255 cacacacacacgcataggca 9236

>emb|AL670290.13| Mouse DNA sequence from clone RP23-309M8 on chromosome 4, complete
              sequence
          Length = 174638

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     cacacacacacgcataggca 118
              ||||||||||||||||||||
Sbjct: 112984 cacacacacacgcataggca 113003


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,103,388
Number of Sequences: 3902068
Number of extensions: 12103388
Number of successful extensions: 108491
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108326
Number of HSP's gapped (non-prelim): 160
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)