| Clone Name | rbaal40e07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL844142.5| Mouse DNA sequence from clone RP23-355C24 on chromosome 4, complete sequence Length = 121550 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 tattcttttagttctagagct 169 ||||||||||||||||||||| Sbjct: 88620 tattcttttagttctagagct 88640
>gb|U70849.1| Caenorhabditis elegans cosmid F29B9, complete sequence Length = 24784 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 aattttcttgaatattctttt 157 ||||||||||||||||||||| Sbjct: 4808 aattttcttgaatattctttt 4828
>gb|AC003019.1|AC003019 Mus musculus Chromosome 4 BAC clone BacB6, complete sequence Length = 138473 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 tattcttttagttctagagct 169 ||||||||||||||||||||| Sbjct: 104839 tattcttttagttctagagct 104819
>ref|NM_111876.3| Arabidopsis thaliana SCPL49; catalytic/ serine carboxypeptidase AT3G10410 (SCPL49) mRNA, complete cds Length = 1799 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ttgtctgcaactctttgttc 41 |||||||||||||||||||| Sbjct: 980 ttgtctgcaactctttgttc 999
>gb|AC149299.1| Populus trichocarpa clone Pop1-037B22, complete sequence Length = 143392 Score = 40.1 bits (20), Expect = 2.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 138 attttcttgaatattcttttagttctag 165 ||||||||||||||| ||||| |||||| Sbjct: 173 attttcttgaatattattttatttctag 200
>gb|AC149296.1| Populus trichocarpa clone Pop1-012O23, complete sequence Length = 123280 Score = 40.1 bits (20), Expect = 2.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 138 attttcttgaatattcttttagttctag 165 ||||||||||||||| ||||| |||||| Sbjct: 122076 attttcttgaatattattttatttctag 122103
>gb|AC154746.2| Mus musculus BAC clone RP24-396N7 from chromosome 14, complete sequence Length = 184783 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 tattcttttagttctagagctagt 172 |||||||||| ||||||||||||| Sbjct: 31745 tattcttttaattctagagctagt 31768
>gb|AC116997.3| Mus musculus BAC clone RP23-8J15 from chromosome 1, complete sequence Length = 190712 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 ttcttttagttctagagctagtgg 174 ||||||||||||||||||| |||| Sbjct: 148447 ttcttttagttctagagctcgtgg 148424
>gb|AY149954.1| Arabidopsis thaliana At3g10410/F13M14_32 mRNA, complete cds Length = 1551 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ttgtctgcaactctttgttc 41 |||||||||||||||||||| Sbjct: 959 ttgtctgcaactctttgttc 978
>gb|AY091767.1| Arabidopsis thaliana AT3g10410/F13M14_32 mRNA, complete cds Length = 1771 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ttgtctgcaactctttgttc 41 |||||||||||||||||||| Sbjct: 980 ttgtctgcaactctttgttc 999
>gb|AC154441.3| Mus musculus BAC clone RP24-176O5 from chromosome 13, complete sequence Length = 169507 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ttcttttagttctagagcta 170 |||||||||||||||||||| Sbjct: 34893 ttcttttagttctagagcta 34874
>ref|XM_394614.2| PREDICTED: Apis mellifera similar to aldehyde dehydrogenase (LOC411140), mRNA Length = 1596 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 tgggcaaaatattgccagaa 87 |||||||||||||||||||| Sbjct: 377 tgggcaaaatattgccagaa 396
>gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13M14 genomic sequence, complete sequence Length = 118107 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ttgtctgcaactctttgttc 41 |||||||||||||||||||| Sbjct: 110883 ttgtctgcaactctttgttc 110902
>dbj|AP005060.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-637N19, complete sequence Length = 107942 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 atgaaaacaacaaaggtaaa 125 |||||||||||||||||||| Sbjct: 4997 atgaaaacaacaaaggtaaa 5016
>gb|M81130.1|ATHCPYLP Arabidopsis thaliana carboxypeptidase Y-like protein gene, complete cds Length = 3830 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ttgtctgcaactctttgttc 41 |||||||||||||||||||| Sbjct: 2217 ttgtctgcaactctttgttc 2236 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,644,095 Number of Sequences: 3902068 Number of extensions: 2644095 Number of successful extensions: 190819 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 190792 Number of HSP's gapped (non-prelim): 27 length of query: 213 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 191 effective length of database: 17,147,199,772 effective search space: 3275115156452 effective search space used: 3275115156452 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)