ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal40e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA 172 4e-40
2ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group... 172 4e-40
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 172 4e-40
4dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 172 4e-40
5dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic D... 172 4e-40
6dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 4e-40
7dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 4e-40
8dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 4e-40
9gb|AY108197.1| Zea mays PCO065133 mRNA sequence 107 2e-20
10ref|XM_473942.1| Oryza sativa (japonica cultivar-group), predic... 90 5e-15
11emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 90 5e-15
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 90 5e-15
13dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 5e-15
14dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 5e-15
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 88 2e-14
16gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 88 2e-14
17dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
18dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
19dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
20dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
21gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA... 72 1e-09
22gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) m... 48 0.016
23dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.061
24gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 0.96
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.96
26dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic D... 42 0.96
27dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.96
28dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 0.96
29ref|NM_180253.1| Arabidopsis thaliana glycolate oxidase/ oxidore... 40 3.8
30ref|NM_180254.1| Arabidopsis thaliana glycolate oxidase/ oxidore... 40 3.8
31ref|NM_001035617.1| Arabidopsis thaliana glycolate oxidase/ oxid... 40 3.8
32ref|NM_112302.2| Arabidopsis thaliana glycolate oxidase/ oxidore... 40 3.8
33gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 3.8
34gb|AY596544.1| Saccharum officinarum clone SCCCCL3140E04, comple... 40 3.8
35gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 3.8
36emb|AJ867403.1| Zea mays mRNA for glycosyltransferase (a4 gene) 40 3.8
37emb|AJ867402.1| Saccharum officinarum mRNA for glycosyltransfera... 40 3.8
38emb|AJ867401.1| Sorghum bicolor mRNA for glycosyltransferase (a4... 40 3.8
39gb|AY081566.1| Arabidopsis thaliana glycolate oxidase (At3g14420... 40 3.8
40gb|AY074830.1| Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, compl... 40 3.8
41gb|AY065122.1| Arabidopsis thaliana glycolate oxidase (At3g14420... 40 3.8
42gb|AF428328.1|AF428328 Arabidopsis thaliana AT3g14420/MOA2_2 mRN... 40 3.8
43gb|AF428396.1|AF428396 Arabidopsis thaliana AT3g14420/MOA2_2 mRN... 40 3.8
44dbj|AK220934.1| Arabidopsis thaliana mRNA for glycolate oxidase ... 40 3.8
45gb|AY053412.1| Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, compl... 40 3.8
46dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 3.8
47dbj|AB028617.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 3.8 
>ref|XM_476669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1439

 Score =  172 bits (87), Expect = 4e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                        
Query: 144  ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 203
            ||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||
Sbjct: 1176 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 1117

                                                                        
Query: 204  gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 263
            |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 1116 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 1057

                           
Query: 264  catcttgagcacgtt 278
            |||||  ||||||||
Sbjct: 1056 catctgcagcacgtt 1042
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>ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group), B1364A02.11-1 mRNA
          Length = 1501

 Score =  172 bits (87), Expect = 4e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                        
Query: 144  ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 203
            ||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||
Sbjct: 1217 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 1158

                                                                        
Query: 204  gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 263
            |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 1157 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 1098

                           
Query: 264  catcttgagcacgtt 278
            |||||  ||||||||
Sbjct: 1097 catctgcagcacgtt 1083
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  172 bits (87), Expect = 4e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                           
Query: 144     ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 203
               ||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||
Sbjct: 2833211 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 2833152

                                                                           
Query: 204     gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 263
               |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 2833151 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 2833092

                              
Query: 264     catcttgagcacgtt 278
               |||||  ||||||||
Sbjct: 2833091 catctgcagcacgtt 2833077
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>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1364A02
          Length = 137933

 Score =  172 bits (87), Expect = 4e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                          
Query: 144    ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 203
              ||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||
Sbjct: 136772 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 136713

                                                                          
Query: 204    gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 263
              |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 136712 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 136653

                             
Query: 264    catcttgagcacgtt 278
              |||||  ||||||||
Sbjct: 136652 catctgcagcacgtt 136638
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>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0050B07
          Length = 142134

 Score =  172 bits (87), Expect = 4e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                        
Query: 144  ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 203
            ||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||
Sbjct: 3498 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 3439

                                                                        
Query: 204  gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 263
            |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 3438 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 3379

                           
Query: 264  catcttgagcacgtt 278
            |||||  ||||||||
Sbjct: 3378 catctgcagcacgtt 3364
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>dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A14, full
            insert sequence
          Length = 1738

 Score =  172 bits (87), Expect = 4e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                        
Query: 144  ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 203
            ||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||
Sbjct: 1475 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 1416

                                                                        
Query: 204  gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 263
            |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 1415 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 1356

                           
Query: 264  catcttgagcacgtt 278
            |||||  ||||||||
Sbjct: 1355 catctgcagcacgtt 1341
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>dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E11, full
            insert sequence
          Length = 1439

 Score =  172 bits (87), Expect = 4e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                        
Query: 144  ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 203
            ||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||
Sbjct: 1176 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 1117

                                                                        
Query: 204  gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 263
            |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 1116 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 1057

                           
Query: 264  catcttgagcacgtt 278
            |||||  ||||||||
Sbjct: 1056 catctgcagcacgtt 1042
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>dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E08, full
            insert sequence
          Length = 1501

 Score =  172 bits (87), Expect = 4e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                        
Query: 144  ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 203
            ||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||
Sbjct: 1217 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 1158

                                                                        
Query: 204  gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 263
            |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 1157 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 1098

                           
Query: 264  catcttgagcacgtt 278
            |||||  ||||||||
Sbjct: 1097 catctgcagcacgtt 1083
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>gb|AY108197.1| Zea mays PCO065133 mRNA sequence
          Length = 1667

 Score =  107 bits (54), Expect = 2e-20
 Identities = 105/122 (86%)
 Strand = Plus / Minus

                                                                        
Query: 145  tacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggtg 204
            |||||||| ||||| ||| ||| ||  ||||||| |||||||| || ||| |||||||||
Sbjct: 1323 tacaagcgcgacgggatggcgctgagcttgtcggactcggtgatgatgtgcttgcgggtg 1264

                                                                        
Query: 205  atgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcagc 264
            || || || || ||| |||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 1263 atttcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcccgcagc 1204

              
Query: 265  at 266
            ||
Sbjct: 1203 at 1202
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>ref|XM_473942.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                        
Query: 181  tcggtgacgacgtggttgcgggtgatgtctgctagcgagttgcagccgctgagcgccatg 240
            ||||||| |||||||||||||||||| || || |||||  |||| |||||||||||||||
Sbjct: 1073 tcggtgatgacgtggttgcgggtgatctcggccagcgacgtgcatccgctgagcgccatg 1014

                                                             
Query: 241  gtcagctcgaactcgtcgcgcagcatcttgagcacgttgctcaccccgg 289
            || ||||| | ||||||||| |||||||  ||||| || ||||| ||||
Sbjct: 1013 gtgagctccagctcgtcgcggagcatctgcagcaccttcctcacgccgg 965
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>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
             complete sequence
          Length = 187601

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                         
Query: 181   tcggtgacgacgtggttgcgggtgatgtctgctagcgagttgcagccgctgagcgccatg 240
             ||||||| |||||||||||||||||| || || |||||  |||| |||||||||||||||
Sbjct: 59399 tcggtgatgacgtggttgcgggtgatctcggccagcgacgtgcatccgctgagcgccatg 59340

                                                              
Query: 241   gtcagctcgaactcgtcgcgcagcatcttgagcacgttgctcaccccgg 289
             || ||||| | ||||||||| |||||||  ||||| || ||||| ||||
Sbjct: 59339 gtgagctccagctcgtcgcggagcatctgcagcaccttcctcacgccgg 59291



 Score = 46.1 bits (23), Expect = 0.061
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 221   tgcagccgctgagcgccatggtcagctcgaactcgtcgcgcagcatc 267
             |||||||||||||||||||||| | ||| | |||||| | |||||||
Sbjct: 63427 tgcagccgctgagcgccatggtgatctccagctcgtctctcagcatc 63381
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                            
Query: 181      tcggtgacgacgtggttgcgggtgatgtctgctagcgagttgcagccgctgagcgccatg 240
                ||||||| |||||||||||||||||| || || |||||  |||| |||||||||||||||
Sbjct: 31726129 tcggtgatgacgtggttgcgggtgatctcggccagcgacgtgcatccgctgagcgccatg 31726070

                                                                 
Query: 241      gtcagctcgaactcgtcgcgcagcatcttgagcacgttgctcaccccgg 289
                || ||||| | ||||||||| |||||||  ||||| || ||||| ||||
Sbjct: 31726069 gtgagctccagctcgtcgcggagcatctgcagcaccttcctcacgccgg 31726021



 Score = 46.1 bits (23), Expect = 0.061
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                               
Query: 221      tgcagccgctgagcgccatggtcagctcgaactcgtcgcgcagcatc 267
                |||||||||||||||||||||| | ||| | |||||| | |||||||
Sbjct: 31730157 tgcagccgctgagcgccatggtgatctccagctcgtctctcagcatc 31730111
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>dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156O03, full
            insert sequence
          Length = 1435

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                        
Query: 181  tcggtgacgacgtggttgcgggtgatgtctgctagcgagttgcagccgctgagcgccatg 240
            ||||||| |||||||||||||||||| || || |||||  |||| |||||||||||||||
Sbjct: 1142 tcggtgatgacgtggttgcgggtgatctcggccagcgacgtgcatccgctgagcgccatg 1083

                                                             
Query: 241  gtcagctcgaactcgtcgcgcagcatcttgagcacgttgctcaccccgg 289
            || ||||| | ||||||||| |||||||  ||||| || ||||| ||||
Sbjct: 1082 gtgagctccagctcgtcgcggagcatctgcagcaccttcctcacgccgg 1034
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>dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F07, full
            insert sequence
          Length = 1427

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                        
Query: 181  tcggtgacgacgtggttgcgggtgatgtctgctagcgagttgcagccgctgagcgccatg 240
            ||||||| |||||||||||||||||| || || |||||  |||| |||||||||||||||
Sbjct: 1146 tcggtgatgacgtggttgcgggtgatctcggccagcgacgtgcatccgctgagcgccatg 1087

                                                             
Query: 241  gtcagctcgaactcgtcgcgcagcatcttgagcacgttgctcaccccgg 289
            || ||||| | ||||||||| |||||||  ||||| || ||||| ||||
Sbjct: 1086 gtgagctccagctcgtcgcggagcatctgcagcaccttcctcacgccgg 1038
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                            
Query: 198      gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 257
                |||||||||||| || |||||| |||| ||||||||||||||||| ||||||||||| ||
Sbjct: 32328113 gcgggtgatgtcggcgagcgaggtgcatccgctgagcgccatggtgagctcgaactcctc 32328054

                                                
Query: 258      gcgcagcatcttgagcacgttgctcaccccgg 289
                 |||| ||||   |||||||| ||||||||||
Sbjct: 32328053 ccgcatcatccgcagcacgttcctcaccccgg 32328022
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>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                         
Query: 198   gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 257
             |||||||||||| || |||||| |||| ||||||||||||||||| ||||||||||| ||
Sbjct: 61880 gcgggtgatgtcggcgagcgaggtgcatccgctgagcgccatggtgagctcgaactcctc 61821

                                             
Query: 258   gcgcagcatcttgagcacgttgctcaccccgg 289
              |||| ||||   |||||||| ||||||||||
Sbjct: 61820 ccgcatcatccgcagcacgttcctcaccccgg 61789
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                            
Query: 198      gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 257
                |||||||||||| || |||||| |||| ||||||||||||||||| ||||||||||| ||
Sbjct: 32418623 gcgggtgatgtcggcgagcgaggtgcatccgctgagcgccatggtgagctcgaactcctc 32418564

                                                
Query: 258      gcgcagcatcttgagcacgttgctcaccccgg 289
                 |||| ||||   |||||||| ||||||||||
Sbjct: 32418563 ccgcatcatccgcagcacgttcctcaccccgg 32418532
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>dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N09, full
            insert sequence
          Length = 1526

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                        
Query: 198  gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 257
            |||||||||||| || |||||| |||| ||||||||||||||||| ||||||||||| ||
Sbjct: 1131 gcgggtgatgtcggcgagcgaggtgcatccgctgagcgccatggtgagctcgaactcctc 1072

                                            
Query: 258  gcgcagcatcttgagcacgttgctcaccccgg 289
             |||| ||||   |||||||| ||||||||||
Sbjct: 1071 ccgcatcatccgcagcacgttcctcaccccgg 1040
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>dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E15, full
            insert sequence
          Length = 1522

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                        
Query: 198  gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 257
            |||||||||||| || |||||| |||| ||||||||||||||||| ||||||||||| ||
Sbjct: 1127 gcgggtgatgtcggcgagcgaggtgcatccgctgagcgccatggtgagctcgaactcctc 1068

                                            
Query: 258  gcgcagcatcttgagcacgttgctcaccccgg 289
             |||| ||||   |||||||| ||||||||||
Sbjct: 1067 ccgcatcatccgcagcacgttcctcaccccgg 1036
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>dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H12, full
            insert sequence
          Length = 1586

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                        
Query: 198  gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 257
            |||||||||||| || |||||| |||| ||||||||||||||||| ||||||||||| ||
Sbjct: 1191 gcgggtgatgtcggcgagcgaggtgcatccgctgagcgccatggtgagctcgaactcctc 1132

                                            
Query: 258  gcgcagcatcttgagcacgttgctcaccccgg 289
             |||| ||||   |||||||| ||||||||||
Sbjct: 1131 ccgcatcatccgcagcacgttcctcaccccgg 1100
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>gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA, complete cds
          Length = 1473

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                        
Query: 198  gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 257
            |||||||||||| || |||||| |||| ||||||| ||||||||| ||||||||||| ||
Sbjct: 1097 gcgggtgatgtcggcgagcgaggtgcatccgctgaacgccatggtgagctcgaactcctc 1038

                                            
Query: 258  gcgcagcatcttgagcacgttgctcaccccgg 289
             |||| ||||   |||| ||| ||||||||||
Sbjct: 1037 ccgcatcatccgcagcaggttcctcaccccgg 1006
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>gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) mRNA, complete cds
          Length = 1486

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                        
Query: 179  cctcggtgacgacgtggttgcgggtgatgtctgctagcgagttgcagccgctgagcgcca 238
            |||| |||| || ||||||||| ||||||||    ||||||  ||| || ||||| ||||
Sbjct: 1171 cctcagtgaggatgtggttgcgtgtgatgtccttgagcgagaggcatccactgagtgcca 1112

                                        
Query: 239  tggtcagctcgaactcgtcgcgcagcat 266
            |||| ||||||||||| ||||| |||||
Sbjct: 1111 tggtgagctcgaactcctcgcggagcat 1084
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>dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131A08, full
            insert sequence
          Length = 1986

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 221  tgcagccgctgagcgccatggtcagctcgaactcgtcgcgcagcatc 267
            |||||||||||||||||||||| | ||| | |||||| | |||||||
Sbjct: 1620 tgcagccgctgagcgccatggtgatctccagctcgtctctcagcatc 1574
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 163    acgccgaatttgtcggcctcg 183
              |||||||||||||||||||||
Sbjct: 106751 acgccgaatttgtcggcctcg 106771
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 59       atcatgcatggatgcccttac 79
                |||||||||||||||||||||
Sbjct: 41232292 atcatgcatggatgcccttac 41232272
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>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1150F11
          Length = 130355

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 59    atcatgcatggatgcccttac 79
             |||||||||||||||||||||
Sbjct: 49207 atcatgcatggatgcccttac 49187
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>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504E02
          Length = 137468

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 59     atcatgcatggatgcccttac 79
              |||||||||||||||||||||
Sbjct: 129347 atcatgcatggatgcccttac 129327
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 174    gtcggcctcggtgacgacgtggttg 198
              ||||||||||||||||| |||||||
Sbjct: 760046 gtcggcctcggtgacgaggtggttg 760022
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>ref|NM_180253.1| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14420
            transcript variant AT3G14420.2 mRNA, complete cds
          Length = 1494

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  gccatggtcagctcgaactc 254
            ||||||||||||||||||||
Sbjct: 1127 gccatggtcagctcgaactc 1108
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>ref|NM_180254.1| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14420
            transcript variant AT3G14420.3 mRNA, complete cds
          Length = 1586

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  gccatggtcagctcgaactc 254
            ||||||||||||||||||||
Sbjct: 1219 gccatggtcagctcgaactc 1200
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>ref|NM_001035617.1| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14420
            transcript variant AT3G14420.4 mRNA, complete cds
          Length = 1482

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  gccatggtcagctcgaactc 254
            ||||||||||||||||||||
Sbjct: 1115 gccatggtcagctcgaactc 1096
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>ref|NM_112302.2| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14420
            transcript variant AT3G14420.1 mRNA, complete cds
          Length = 1453

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  gccatggtcagctcgaactc 254
            ||||||||||||||||||||
Sbjct: 1086 gccatggtcagctcgaactc 1067
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     ggtcagctcgaactcgtcgc 259
               ||||||||||||||||||||
Sbjct: 1801278 ggtcagctcgaactcgtcgc 1801297
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>gb|AY596544.1| Saccharum officinarum clone SCCCCL3140E04, complete sequence
          Length = 1525

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 243  cagctcgaactcgtcgcgcagcatcttg 270
            |||| ||||| |||||||||||||||||
Sbjct: 1019 cagcccgaacgcgtcgcgcagcatcttg 992
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 247    tcgaactcgtcgcgcagcatcttg 270
              |||| |||||||||||||||||||
Sbjct: 151834 tcgatctcgtcgcgcagcatcttg 151857
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>emb|AJ867403.1| Zea mays mRNA for glycosyltransferase (a4 gene)
          Length = 1514

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 243 cagctcgaactcgtcgcgcagcatcttg 270
           |||| ||||| |||||||||||||||||
Sbjct: 915 cagcccgaacgcgtcgcgcagcatcttg 888
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>emb|AJ867402.1| Saccharum officinarum mRNA for glycosyltransferase (a4 gene)
          Length = 1580

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 243 cagctcgaactcgtcgcgcagcatcttg 270
           |||| ||||| |||||||||||||||||
Sbjct: 998 cagcccgaacgcgtcgcgcagcatcttg 971
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>emb|AJ867401.1| Sorghum bicolor mRNA for glycosyltransferase (a4 gene)
          Length = 1476

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 243 cagctcgaactcgtcgcgcagcatcttg 270
           |||| ||||| |||||||||||||||||
Sbjct: 894 cagcccgaacgcgtcgcgcagcatcttg 867
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>gb|AY081566.1| Arabidopsis thaliana glycolate oxidase (At3g14420) mRNA, complete
           cds
          Length = 577

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 gccatggtcagctcgaactc 254
           ||||||||||||||||||||
Sbjct: 446 gccatggtcagctcgaactc 427
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>gb|AY074830.1| Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds
          Length = 1104

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  gccatggtcagctcgaactc 254
            ||||||||||||||||||||
Sbjct: 1016 gccatggtcagctcgaactc 997
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>gb|AY065122.1| Arabidopsis thaliana glycolate oxidase (At3g14420; MOA2.2) mRNA,
           complete cds
          Length = 1032

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 gccatggtcagctcgaactc 254
           ||||||||||||||||||||
Sbjct: 691 gccatggtcagctcgaactc 672
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>gb|AF428328.1|AF428328 Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  gccatggtcagctcgaactc 254
            ||||||||||||||||||||
Sbjct: 1069 gccatggtcagctcgaactc 1050
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>gb|AF428396.1|AF428396 Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds
          Length = 1377

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  gccatggtcagctcgaactc 254
            ||||||||||||||||||||
Sbjct: 1062 gccatggtcagctcgaactc 1043
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>dbj|AK220934.1| Arabidopsis thaliana mRNA for glycolate oxidase like protein,
           partial cds, clone: RAFL22-51-H24
          Length = 438

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 gccatggtcagctcgaactc 254
           ||||||||||||||||||||
Sbjct: 156 gccatggtcagctcgaactc 137
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>gb|AY053412.1| Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds
          Length = 1427

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  gccatggtcagctcgaactc 254
            ||||||||||||||||||||
Sbjct: 1067 gccatggtcagctcgaactc 1048
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    tgagcgccatggtcagctcg 249
              ||||||||||||||||||||
Sbjct: 397777 tgagcgccatggtcagctcg 397758
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>dbj|AB028617.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MOA2
          Length = 52232

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  gccatggtcagctcgaactc 254
            ||||||||||||||||||||
Sbjct: 4003 gccatggtcagctcgaactc 3984


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,544,882
Number of Sequences: 3902068
Number of extensions: 1544882
Number of successful extensions: 26197
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25809
Number of HSP's gapped (non-prelim): 388
length of query: 289
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 267
effective length of database: 17,147,199,772
effective search space: 4578302339124
effective search space used: 4578302339124
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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