>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related|
           protein) (WIP-and CR16-homologous protein)
          Length = 440

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +1

Query: 229 PPRDGPQASLLIEMPPGPLRLRTSIPSQSPTGLPPGRVNPWGIPNSMH*SSND 387
           P R+GP A   ++ PP P+ +RT    QS    PP    P G+PN     +N+
Sbjct: 219 PGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSSPTNE 271

>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related|
           protein)
          Length = 440

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 229 PPRDGPQASLLIEMPPGPLRLRTSIPSQSPTGLPPGRVNPWGIPNSMH*SSND 387
           P R+G  A   ++ PP P+ +RT    QS    PP    P G+PN     +N+
Sbjct: 219 PGREGHPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSSPTNE 271

>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)|
          Length = 640

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +1

Query: 223 AGPPRDGPQASLLIEMPPG-PLRLRTSIPSQSPTGLPPGR 339
           +GPP   P  +     PPG P  LR  +P   P G PPGR
Sbjct: 393 SGPPPGPPPGAPPFLRPPGLPSALRGPMPRLLPPGPPPGR 432



 Score = 29.6 bits (65), Expect = 6.6
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = +1

Query: 214 PS*AGPPRDGPQASLLIEMPPGPLRLRTSIPSQSPTGLPPGR---VNPWGIPNSM 369
           P   GPP  GP  +  +  PPGP       PS  P G PPG    + P G+P+++
Sbjct: 370 PPITGPPPLGPPPAPPMR-PPGP-------PSGPPPGPPPGAPPFLRPPGLPSAL 416

>SF3A1_ARATH (Q8RXF1) Probable splicing factor 3 subunit 1|
          Length = 785

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +1

Query: 196 GESSCLPS*AGPPRDGPQASLLIEMPPGPLRLRTSIPSQSPTGLPPGRVNPWGIP 360
           G+ +  P  A  P   P   ++  +PP P  L  ++P   P+   PG   P G+P
Sbjct: 534 GDPNSFPGPAALPPPRPGVPIVRPLPPPP-NLALNLPRPPPSAQYPGAPRPLGVP 587

>SLK_MOUSE (O54988) STE20-like serine/threonine-protein kinase (EC 2.7.11.1)|
           (STE20-like kinase) (STE20-related
           serine/threonine-protein kinase) (STE20-related kinase)
           (mSLK) (Serine/threonine-protein kinase 2)
           (STE20-related kinase SMAK) (Etk4)
          Length = 1233

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +1

Query: 190 GEGESSCLPS*--AGPPRDGPQASLLIEMPPGPLRLRTSIPSQSP 318
           GEG+ +  P+   A  P +GP+A    E PPG  R+    P Q P
Sbjct: 567 GEGDEALAPTQTLAEKPTEGPEAGGAEEEPPGGERVEDKQPEQQP 611

>BORG1_MOUSE (Q8JZX9) Cdc42 effector protein 2 (Binder of Rho GTPases 1)|
          Length = 214

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +1

Query: 229 PPRDGPQASLL--IEMPPGPLRLRTSIPSQSPTGLP--PGRVNPWGIPNS 366
           P   GPQA  L   + PP P RL    P  SP   P   G V+ W IP +
Sbjct: 111 PVIGGPQALTLPTAQAPPKPPRLHLESPQPSPQPSPQGAGNVDVWRIPEA 160

>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 581

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 214 PS*AGPPRDGPQASLLIEMPPGPLRLRTSIPSQSPTGLPPGRVNP 348
           P  A P +  P  +     PPG    R S    SP G PPGR +P
Sbjct: 31  PGRASPAQASPAQASPAGTPPG----RASPAQASPAGTPPGRASP 71

>PAF49_MOUSE (Q76KJ5) RNA polymerase I-associated factor PAF49 (Anti-sense to|
           ERCC-1 protein) (ASE-1) (CD3-epsilon-associated protein)
           (CD3E-associated protein)
          Length = 399

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = +1

Query: 196 GESSCLPS*AGPPR--DGPQASLLIEMPPGPLRL-RTSIPSQSPTGLPP 333
           G  +C P+ +G  R  +GPQ  LL  +P   L+L  TS+P Q P GL P
Sbjct: 103 GRLTCAPAPSGSLRIMEGPQEYLLSRVP---LQLIPTSLPPQIPAGLRP 148

>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)|
           (Trio-associated repeat on actin)
          Length = 2014

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 214 PS*AGPPRDGPQASLLIEMPPGPLRLRTSIPSQSPT 321
           PS + PPR  P+ SL  + PPG     TS+ S +P+
Sbjct: 837 PSFSSPPRQAPEPSLFFQDPPG-----TSMESLAPS 867

>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)|
            (Trio-associated repeat on actin)
          Length = 2365

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 214  PS*AGPPRDGPQASLLIEMPPGPLRLRTSIPSQSPT 321
            PS + PPR  P+ SL  + PPG     TS+ S +P+
Sbjct: 1172 PSFSSPPRQAPEPSLFFQDPPG-----TSMESLAPS 1202

>RSMB_MOUSE (P27048) Small nuclear ribonucleoprotein-associated protein B|
           (snRNP-B) (Sm protein B) (Sm-B) (SmB)
          Length = 231

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +1

Query: 214 PS*AGPP----RDGPQASLLIEMPPGPLRLRTSIPSQSPTGLPPGRVNPWGIP 360
           P   GPP    R  P   ++   PP  +R     P   P GLPPGR  P G+P
Sbjct: 170 PGRGGPPPPMGRGAPPPGMM--GPPPGMRP----PMGPPMGLPPGRGTPMGMP 216

>FOG1_MOUSE (O35615) Zinc finger protein ZFPM1 (Zinc finger protein multitype|
           1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1)
          Length = 995

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +1

Query: 223 AGPPRDGPQASLLIEMP--PGPLRLRTSIPSQSPTGLP-PGRVNPWG 354
           +GP   GPQA      P  P P+R++T + S +P   P PG +   G
Sbjct: 482 SGPGEPGPQAPSRTPSPHSPNPVRVKTELSSPTPGSSPGPGELTMAG 528

>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)|
          Length = 1362

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 214  PS*AGPP-RDGPQASLLIEMPPGPLRLRTSIPSQSPTGLPPGRVNPWGIP 360
            P  +GPP +DG      +  P GP  +R S  SQ P G PPG   P G P
Sbjct: 1054 PGPSGPPGKDGRNG---LPGPIGPAGVRGSHGSQGPAG-PPGPPGPPGPP 1099


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,238,179
Number of Sequences: 219361
Number of extensions: 2247095
Number of successful extensions: 5651
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5635
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)