| Clone Name | rbaal39p16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_184854.1| Oryza sativa (japonica cultivar-group), mRNA Length = 516 Score = 561 bits (283), Expect = e-156 Identities = 388/423 (91%) Strand = Plus / Minus Query: 247 ttttctgcagctactttctccctgtgaagcctttctgcttctttcattgctgcattctgc 306 ||||||||||| | |||||||||||| ||| | |||||| | | ||| |||||| |||| Sbjct: 431 ttttctgcagccaatttctccctgtgcagcttctctgctgcctgcatcgctgcacgctgc 372 Query: 307 tctgtctgaaggcgcttcatttcctcttcttgctgctgcctctcaaaccaagtatccgca 366 |||| ||||||||| | |||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 371 tctgcctgaaggcgttgcatttcttcttcctgctgctgcctctcgaaccaagtatctgca 312 Query: 367 tccgcccaaactggctgggcggcccatccctgctcccctcccttgattttctcggggaag 426 || ||||||| |||||| || ||||| |||||||| ||||||||||| ||| |||||| Sbjct: 311 tcagcccaaattggctgtgctgcccacccctgctctcctcccttgatgcgctcagggaag 252 Query: 427 gcgtagttcacggtgaggacgcggccgaagagctcggcgccgtccatgttgtccatggcg 486 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 gcgtagttgacggtgaggacgcggccgaagagctcggcgccgtccatgttgtccatggcg 192 Query: 487 gcggcggcgtcctcgcgctcgaggaaggtgacgaagccgaaggagcggtgcttctgcgtg 546 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 gcggcggcgtcctcccgctcgaggaaggtgacgaagccgaaggagcggtgcttctgcgtg 132 Query: 547 gcctggtcgagcggcgtcttgacgtccttgacctccccgaacggcacgaacgccgcgtgc 606 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 131 gcctggtcgagcggcgtcttgacgtccttgatctccccgaagggcacgaacgccgcgtgc 72 Query: 607 aggatcttctcgtccacctcctccgcgagcccacctacgtagagggtgttcttctgcacc 666 |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 71 aggatcttctcgtccacctcctccgccagcccacctacatagagcgtgttcttctgcacc 12 Query: 667 ggc 669 ||| Sbjct: 11 ggc 9
>gb|AY106205.1| Zea mays PCO097957 mRNA sequence Length = 770 Score = 496 bits (250), Expect = e-137 Identities = 334/362 (92%) Strand = Plus / Minus Query: 304 tgctctgtctgaaggcgcttcatttcctcttcttgctgctgcctctcaaaccaagtatcc 363 ||||||| ||| || |||| ||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 467 tgctctgcctgcagccgctgcatctcctcttcctgctgctgcctctcgaaccaagtgtcc 408 Query: 364 gcatccgcccaaactggctgggcggcccatccctgctcccctcccttgattttctcgggg 423 ||||| ||||| | ||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 407 gcatcggcccagattggctgggcagcccatccctgctcccctcccttgatgcgctcgggg 348 Query: 424 aaggcgtagttcacggtgaggacgcggccgaagagctcggcgccgtccatgttgtccatg 483 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 347 aaggcgtagttgacggtaagcacgcggccgaagagctcggcgccgtccatgttgtccatg 288 Query: 484 gcggcggcggcgtcctcgcgctcgaggaaggtgacgaagccgaaggagcggtgcttctgc 543 || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 287 gcagcggcggcgtcctcgcgctccaggaaggtgacgaaaccgaaggagcggtgcttctgc 228 Query: 544 gtggcctggtcgagcggcgtcttgacgtccttgacctccccgaacggcacgaacgccgcg 603 |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| Sbjct: 227 gtggactggtcgagcggcgtcttgacgtccttgacctcaccgaagggcacgaacgcggcg 168 Query: 604 tgcaggatcttctcgtccacctcctccgcgagcccacctacgtagagggtgttcttctgc 663 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 167 tgcaggattttctcgtccacctcctccgccagcccaccgacgtagagggtgttcttctgc 108 Query: 664 ac 665 || Sbjct: 107 ac 106
>gb|AC092778.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015G17, complete sequence Length = 158173 Score = 422 bits (213), Expect = e-115 Identities = 252/265 (95%) Strand = Plus / Minus Query: 378 tggctgggcggcccatccctgctcccctcccttgattttctcggggaaggcgtagttcac 437 |||||| || ||||| |||||||| ||||||||||| ||| |||||||||||||| || Sbjct: 123064 tggctgtgctgcccacccctgctctcctcccttgatgcgctcagggaaggcgtagttgac 123005 Query: 438 ggtgaggacgcggccgaagagctcggcgccgtccatgttgtccatggcggcggcggcgtc 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123004 ggtgaggacgcggccgaagagctcggcgccgtccatgttgtccatggcggcggcggcgtc 122945 Query: 498 ctcgcgctcgaggaaggtgacgaagccgaaggagcggtgcttctgcgtggcctggtcgag 557 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122944 ctcccgctcgaggaaggtgacgaagccgaaggagcggtgcttctgcgtggcctggtcgag 122885 Query: 558 cggcgtcttgacgtccttgacctccccgaacggcacgaacgccgcgtgcaggatcttctc 617 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 122884 cggcgtcttgacgtccttgatctccccgaagggcacgaacgccgcgtgcaggatcttctc 122825 Query: 618 gtccacctcctccgcgagcccacct 642 ||||||||||||||| ||||||||| Sbjct: 122824 gtccacctcctccgccagcccacct 122800 Score = 113 bits (57), Expect = 8e-22 Identities = 114/133 (85%) Strand = Plus / Minus Query: 247 ttttctgcagctactttctccctgtgaagcctttctgcttctttcattgctgcattctgc 306 ||||||||||| | |||||||||||| ||| | |||||| | | ||| |||||| |||| Sbjct: 127062 ttttctgcagccaatttctccctgtgcagcttctctgctgcctgcatcgctgcacgctgc 127003 Query: 307 tctgtctgaaggcgcttcatttcctcttcttgctgctgcctctcaaaccaagtatccgca 366 |||| ||||||||| | |||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 127002 tctgcctgaaggcgttgcatttcttcttcctgctgctgcctctcgaaccaagtatctgca 126943 Query: 367 tccgcccaaactg 379 || |||||||||| Sbjct: 126942 tcagcccaaactg 126930 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 639 acctacgtagagggtgttcttctgcaccggc 669 |||||| ||||| |||||||||||||||||| Sbjct: 122591 acctacatagagcgtgttcttctgcaccggc 122561
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 422 bits (213), Expect = e-115 Identities = 252/265 (95%) Strand = Plus / Plus Query: 378 tggctgggcggcccatccctgctcccctcccttgattttctcggggaaggcgtagttcac 437 |||||| || ||||| |||||||| ||||||||||| ||| |||||||||||||| || Sbjct: 22225754 tggctgtgctgcccacccctgctctcctcccttgatgcgctcagggaaggcgtagttgac 22225813 Query: 438 ggtgaggacgcggccgaagagctcggcgccgtccatgttgtccatggcggcggcggcgtc 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22225814 ggtgaggacgcggccgaagagctcggcgccgtccatgttgtccatggcggcggcggcgtc 22225873 Query: 498 ctcgcgctcgaggaaggtgacgaagccgaaggagcggtgcttctgcgtggcctggtcgag 557 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22225874 ctcccgctcgaggaaggtgacgaagccgaaggagcggtgcttctgcgtggcctggtcgag 22225933 Query: 558 cggcgtcttgacgtccttgacctccccgaacggcacgaacgccgcgtgcaggatcttctc 617 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 22225934 cggcgtcttgacgtccttgatctccccgaagggcacgaacgccgcgtgcaggatcttctc 22225993 Query: 618 gtccacctcctccgcgagcccacct 642 ||||||||||||||| ||||||||| Sbjct: 22225994 gtccacctcctccgccagcccacct 22226018 Score = 113 bits (57), Expect = 8e-22 Identities = 114/133 (85%) Strand = Plus / Plus Query: 247 ttttctgcagctactttctccctgtgaagcctttctgcttctttcattgctgcattctgc 306 ||||||||||| | |||||||||||| ||| | |||||| | | ||| |||||| |||| Sbjct: 22221756 ttttctgcagccaatttctccctgtgcagcttctctgctgcctgcatcgctgcacgctgc 22221815 Query: 307 tctgtctgaaggcgcttcatttcctcttcttgctgctgcctctcaaaccaagtatccgca 366 |||| ||||||||| | |||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 22221816 tctgcctgaaggcgttgcatttcttcttcctgctgctgcctctcgaaccaagtatctgca 22221875 Query: 367 tccgcccaaactg 379 || |||||||||| Sbjct: 22221876 tcagcccaaactg 22221888 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 639 acctacgtagagggtgttcttctgcaccggc 669 |||||| ||||| |||||||||||||||||| Sbjct: 22226227 acctacatagagcgtgttcttctgcaccggc 22226257 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ggcggcggcggcgtcctcgc 502 |||||||||||||||||||| Sbjct: 31621414 ggcggcggcggcgtcctcgc 31621433
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 422 bits (213), Expect = e-115 Identities = 252/265 (95%) Strand = Plus / Plus Query: 378 tggctgggcggcccatccctgctcccctcccttgattttctcggggaaggcgtagttcac 437 |||||| || ||||| |||||||| ||||||||||| ||| |||||||||||||| || Sbjct: 22218783 tggctgtgctgcccacccctgctctcctcccttgatgcgctcagggaaggcgtagttgac 22218842 Query: 438 ggtgaggacgcggccgaagagctcggcgccgtccatgttgtccatggcggcggcggcgtc 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22218843 ggtgaggacgcggccgaagagctcggcgccgtccatgttgtccatggcggcggcggcgtc 22218902 Query: 498 ctcgcgctcgaggaaggtgacgaagccgaaggagcggtgcttctgcgtggcctggtcgag 557 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22218903 ctcccgctcgaggaaggtgacgaagccgaaggagcggtgcttctgcgtggcctggtcgag 22218962 Query: 558 cggcgtcttgacgtccttgacctccccgaacggcacgaacgccgcgtgcaggatcttctc 617 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 22218963 cggcgtcttgacgtccttgatctccccgaagggcacgaacgccgcgtgcaggatcttctc 22219022 Query: 618 gtccacctcctccgcgagcccacct 642 ||||||||||||||| ||||||||| Sbjct: 22219023 gtccacctcctccgccagcccacct 22219047 Score = 113 bits (57), Expect = 8e-22 Identities = 114/133 (85%) Strand = Plus / Plus Query: 247 ttttctgcagctactttctccctgtgaagcctttctgcttctttcattgctgcattctgc 306 ||||||||||| | |||||||||||| ||| | |||||| | | ||| |||||| |||| Sbjct: 22214785 ttttctgcagccaatttctccctgtgcagcttctctgctgcctgcatcgctgcacgctgc 22214844 Query: 307 tctgtctgaaggcgcttcatttcctcttcttgctgctgcctctcaaaccaagtatccgca 366 |||| ||||||||| | |||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 22214845 tctgcctgaaggcgttgcatttcttcttcctgctgctgcctctcgaaccaagtatctgca 22214904 Query: 367 tccgcccaaactg 379 || |||||||||| Sbjct: 22214905 tcagcccaaactg 22214917 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 639 acctacgtagagggtgttcttctgcaccggc 669 |||||| ||||| |||||||||||||||||| Sbjct: 22219256 acctacatagagcgtgttcttctgcaccggc 22219286 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ggcggcggcggcgtcctcgc 502 |||||||||||||||||||| Sbjct: 31711930 ggcggcggcggcgtcctcgc 31711949
>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete sequence Length = 132987 Score = 113 bits (57), Expect = 8e-22 Identities = 114/133 (85%) Strand = Plus / Minus Query: 247 ttttctgcagctactttctccctgtgaagcctttctgcttctttcattgctgcattctgc 306 ||||||||||| | |||||||||||| ||| | |||||| | | ||| |||||| |||| Sbjct: 3106 ttttctgcagccaatttctccctgtgcagcttctctgctgcctgcatcgctgcacgctgc 3047 Query: 307 tctgtctgaaggcgcttcatttcctcttcttgctgctgcctctcaaaccaagtatccgca 366 |||| ||||||||| | |||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 3046 tctgcctgaaggcgttgcatttcttcttcctgctgctgcctctcgaaccaagtatctgca 2987 Query: 367 tccgcccaaactg 379 || |||||||||| Sbjct: 2986 tcagcccaaactg 2974
>ref|NM_101238.2| Arabidopsis thaliana ATE1; nucleic acid binding AT1G13690 (ATE1) mRNA, complete cds Length = 853 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 340 tgctgcctctcaaaccaagtatccgcatccgcccaaactggctgggcggcccatccctgc 399 ||||||||||||||||| || || ||||| ||||||| ||| || || ||||| ||||| Sbjct: 444 tgctgcctctcaaaccatgtgtctgcatctgcccaaagtggatgagcagcccaaccctgt 385 Query: 400 tcccctcccttgattttctcgggga 424 || || ||||| |||||||| |||| Sbjct: 384 tcaccacccttaattttctcaggga 360
>gb|AF334721.1| Arabidopsis thaliana clone C00108 (n) unknown protein (At1g13690) mRNA, complete cds Length = 324 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 340 tgctgcctctcaaaccaagtatccgcatccgcccaaactggctgggcggcccatccctgc 399 ||||||||||||||||| || || ||||| ||||||| ||| || || ||||| ||||| Sbjct: 143 tgctgcctctcaaaccatgtgtctgcatctgcccaaagtggatgagcagcccaaccctgt 84 Query: 400 tcccctcccttgattttctcgggga 424 || || ||||| |||||||| |||| Sbjct: 83 tcaccacccttaattttctcaggga 59
>gb|U64825.1|ATU64825 Arabidopsis thaliana AtE1 (atE1) mRNA, complete cds Length = 609 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 340 tgctgcctctcaaaccaagtatccgcatccgcccaaactggctgggcggcccatccctgc 399 ||||||||||||||||| || || ||||| ||||||| ||| || || ||||| ||||| Sbjct: 196 tgctgcctctcaaaccatgtgtctgcatctgcccaaagtggatgagcagcccaaccctgt 137 Query: 400 tcccctcccttgattttctcgggga 424 || || ||||| |||||||| |||| Sbjct: 136 tcaccacccttaattttctcaggga 112
>ref|XM_423739.1| PREDICTED: Gallus gallus similar to peptidylprolyl isomerase E (LOC426061), mRNA Length = 495 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 583 ccgaacggcacgaacgccgcgtgcaggatcttctcgtccacctcctccgcgagccc 638 |||||||| | ||| || |||||||| | ||||||||||||||||||||| ||||| Sbjct: 89 ccgaacgggatgaaggcggcgtgcagcaccttctcgtccacctcctccgccagccc 34
>emb|BX936216.1| Gallus gallus finished cDNA, clone ChEST959p9 Length = 1082 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 583 ccgaacggcacgaacgccgcgtgcaggatcttctcgtccacctcctccgcgagccc 638 |||||||| | ||| || |||||||| | ||||||||||||||||||||| ||||| Sbjct: 95 ccgaacgggatgaaggcggcgtgcagcaccttctcgtccacctcctccgccagccc 40
>emb|BX935353.1| Gallus gallus finished cDNA, clone ChEST955c18 Length = 1082 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 583 ccgaacggcacgaacgccgcgtgcaggatcttctcgtccacctcctccgcgagccc 638 |||||||| | ||| || |||||||| | ||||||||||||||||||||| ||||| Sbjct: 95 ccgaacgggatgaaggcggcgtgcagcaccttctcgtccacctcctccgccagccc 40
>emb|BX934139.1| Gallus gallus finished cDNA, clone ChEST276o14 Length = 1109 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 583 ccgaacggcacgaacgccgcgtgcaggatcttctcgtccacctcctccgcgagccc 638 |||||||| | ||| || |||||||| | ||||||||||||||||||||| ||||| Sbjct: 114 ccgaacgggatgaaggcggcgtgcagcaccttctcgtccacctcctccgccagccc 59
>dbj|AK059328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A04, full insert sequence Length = 376 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 247 ttttctgcagctactttctccctgtgaagcctttctgcttctttcattgctgcattctgc 306 ||||||||||| | |||||||||||| ||| | |||||| | | ||| |||||| |||| Sbjct: 86 ttttctgcagccaatttctccctgtgcagcttctctgctgcctgcatcgctgcacgctgc 27 Query: 307 tctgtctgaaggcgcttcatttc 329 |||| ||||||||| | |||||| Sbjct: 26 tctgcctgaaggcgttgcatttc 4
>gb|AC027656.4|F21F23 Sequence of BAC F21F23 from Arabidopsis thaliana chromosome 1, complete sequence Length = 79054 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Minus Query: 340 tgctgcctctcaaaccaagtatccgcatccgcccaaactg 379 ||||||||||||||||| || || ||||| |||||||||| Sbjct: 48116 tgctgcctctcaaaccatgtgtctgcatctgcccaaactg 48077
>gb|AY023158.1| Oryza sativa microsatellite MRG5483 containing (GCG)X8, closest to marker C1122, genomic sequence Length = 224 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 639 acctacgtagagggtgttcttctgcaccggc 669 |||||| ||||| |||||||||||||||||| Sbjct: 52 acctacatagagcgtgttcttctgcaccggc 82
>gb|AC117275.3| Mus musculus BAC clone RP23-383F11 from chromosome 18, complete sequence Length = 209162 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 23 aagagatacacggacagaatgagcaga 49 |||||||||| |||||||||||||||| Sbjct: 169581 aagagatacatggacagaatgagcaga 169607
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 479 ccatggcggcggcggcgtcctcg 501 ||||||||||||||||||||||| Sbjct: 1002875 ccatggcggcggcggcgtcctcg 1002897
>gb|AC109203.9| Mus musculus chromosome 18, clone RP23-2B18, complete sequence Length = 216783 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 23 aagagatacacggacagaatgagcaga 49 |||||||||| |||||||||||||||| Sbjct: 209904 aagagatacatggacagaatgagcaga 209878
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 473 tgttgtccatggcggcggcggc 494 |||||||||||||||||||||| Sbjct: 12233672 tgttgtccatggcggcggcggc 12233693 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 cggcggcggcgtcctcgcgctcga 508 ||||||||||||| |||||||||| Sbjct: 2783834 cggcggcggcgtcgtcgcgctcga 2783811
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 473 tgttgtccatggcggcggcggc 494 |||||||||||||||||||||| Sbjct: 12188042 tgttgtccatggcggcggcggc 12188063 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 cggcggcggcgtcctcgcgctcga 508 ||||||||||||| |||||||||| Sbjct: 2783778 cggcggcggcgtcgtcgcgctcga 2783755
>emb|AL713955.4|CNS07YP3 Oryza sativa chromosome 12, . BAC OSJNBa0017L03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159296 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 473 tgttgtccatggcggcggcggc 494 |||||||||||||||||||||| Sbjct: 63645 tgttgtccatggcggcggcggc 63624
>ref|NM_101239.2| Arabidopsis thaliana 6-phosphogluconolactonase/ catalytic AT1G13700 mRNA, complete cds Length = 1387 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 340 tgctgcctctcaaaccaagtatccgcatccgcccaaa 376 ||||||||||||||||| || || ||||| ||||||| Sbjct: 1351 tgctgcctctcaaaccatgtgtctgcatctgcccaaa 1387
>ref|XM_550422.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2292 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 gtccatggcggcggcggcgtc 497 ||||||||||||||||||||| Sbjct: 1057 gtccatggcggcggcggcgtc 1037
>ref|XM_550139.1| Oryza sativa (japonica cultivar-group), mRNA Length = 600 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 ggcggcggcggcgtcctcgcg 503 ||||||||||||||||||||| Sbjct: 30 ggcggcggcggcgtcctcgcg 10
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 616 tcgtccacctcctccgcgagc 636 ||||||||||||||||||||| Sbjct: 218826 tcgtccacctcctccgcgagc 218806
>gb|AC144938.3| Mus musculus BAC clone RP24-129H18 from chromosome 18, complete sequence Length = 207182 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 327 ttcctcttcttgctgctgcctctca 351 ||||||||||||||||| ||||||| Sbjct: 102432 ttcctcttcttgctgctccctctca 102408
>emb|CR721925.2|CNS0GJZF Tetraodon nigroviridis full-length cDNA Length = 758 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 476 tgtccatggcggcggcggcgtcctc 500 ||||| ||||||||||||||||||| Sbjct: 521 tgtccgtggcggcggcggcgtcctc 497
>emb|CR643706.2|CNS0EVNK Tetraodon nigroviridis full-length cDNA Length = 780 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 476 tgtccatggcggcggcggcgtcctc 500 ||||| ||||||||||||||||||| Sbjct: 543 tgtccgtggcggcggcggcgtcctc 519
>gb|AC153142.3| Mus musculus BAC clone RP23-296H17 from chromosome 18, complete sequence Length = 212451 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 327 ttcctcttcttgctgctgcctctca 351 ||||||||||||||||| ||||||| Sbjct: 60213 ttcctcttcttgctgctccctctca 60237
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 ggcggcggcggcgtcctcgcg 503 ||||||||||||||||||||| Sbjct: 21441821 ggcggcggcggcgtcctcgcg 21441841
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 tgtccatggcggcggcggcgt 496 ||||||||||||||||||||| Sbjct: 10045791 tgtccatggcggcggcggcgt 10045771
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 477 gtccatggcggcggcggcgtc 497 ||||||||||||||||||||| Sbjct: 4404133 gtccatggcggcggcggcgtc 4404153 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 ggcggcggcggcgtcctcgcg 503 ||||||||||||||||||||| Sbjct: 2577181 ggcggcggcggcgtcctcgcg 2577201
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 477 gtccatggcggcggcggcgtc 497 ||||||||||||||||||||| Sbjct: 64215 gtccatggcggcggcggcgtc 64235
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 ggcggcggcggcgtcctcgcg 503 ||||||||||||||||||||| Sbjct: 131602 ggcggcggcggcgtcctcgcg 131622
>gb|AC110749.12| Homo sapiens chromosome 17, clone CTD-2303K11, complete sequence Length = 49133 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 gcccatccctgctcccctccc 408 ||||||||||||||||||||| Sbjct: 3171 gcccatccctgctcccctccc 3191
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 ggcggcggcggcgtcctcgcg 503 ||||||||||||||||||||| Sbjct: 3431 ggcggcggcggcgtcctcgcg 3451
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 ggcggcggcggcgtcctcgcg 503 ||||||||||||||||||||| Sbjct: 58926 ggcggcggcggcgtcctcgcg 58946
>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434B04 Length = 167029 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 ggcggcggcggcgtcctcgcg 503 ||||||||||||||||||||| Sbjct: 26956 ggcggcggcggcgtcctcgcg 26976
>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1127C04 Length = 121441 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 tgtccatggcggcggcggcgt 496 ||||||||||||||||||||| Sbjct: 85693 tgtccatggcggcggcggcgt 85673
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 tgtccatggcggcggcggcgt 496 ||||||||||||||||||||| Sbjct: 5137 tgtccatggcggcggcggcgt 5117
>dbj|AK110423.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-A08, full insert sequence Length = 2292 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 gtccatggcggcggcggcgtc 497 ||||||||||||||||||||| Sbjct: 1057 gtccatggcggcggcggcgtc 1037
>emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in linkage group 18, complete sequence Length = 171914 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 ctgtctgaaggcgcttcattt 328 ||||||||||||||||||||| Sbjct: 119645 ctgtctgaaggcgcttcattt 119625
>gb|AC006441.13|AC006441 Homo sapiens chromosome 17, clone hRPC.56_K_13, complete sequence Length = 162996 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 gcccatccctgctcccctccc 408 ||||||||||||||||||||| Sbjct: 152934 gcccatccctgctcccctccc 152954
>emb|AL132987.4|CNS01DTV Human chromosome 14 DNA sequence BAC R-188I13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169505 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 cctttctgcttctttcattgc 296 ||||||||||||||||||||| Sbjct: 48923 cctttctgcttctttcattgc 48943
>gb|AC130542.4| Mus musculus chromosome 6 clone RP24-167F4, complete sequence Length = 192106 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cccatccctgctcccctccc 408 |||||||||||||||||||| Sbjct: 142252 cccatccctgctcccctccc 142233
>gb|AY596295.1| Haloarcula marismortui ATCC 43049 plasmid pNG600, complete sequence Length = 155300 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 cggcggcgtcctcgcgctcg 507 |||||||||||||||||||| Sbjct: 77144 cggcggcgtcctcgcgctcg 77163
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 ccatggcggcggcggcgtcc 498 |||||||||||||||||||| Sbjct: 85761 ccatggcggcggcggcgtcc 85780
>gb|AC105164.12| Mus musculus chromosome 6, clone RP24-296I7, complete sequence Length = 178877 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cccatccctgctcccctccc 408 |||||||||||||||||||| Sbjct: 67591 cccatccctgctcccctccc 67572
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ggcggcggcggcgtcctcgc 502 |||||||||||||||||||| Sbjct: 59253 ggcggcggcggcgtcctcgc 59234
>ref|XM_430219.1| PREDICTED: Gallus gallus hypothetical gene supported by BX935918 (LOC425191), mRNA Length = 1591 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 cccatccctgctcccctccc 408 |||||||||||||||||||| Sbjct: 1357 cccatccctgctcccctccc 1376
>gb|BC023492.1| Mus musculus protein phosphatase 1D magnesium-dependent, delta isoform, mRNA (cDNA clone MGC:32306 IMAGE:5026376), complete cds Length = 2023 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 469 gtgaagcctttctgcttctt 450
>gb|BC051966.1| Mus musculus protein phosphatase 1D magnesium-dependent, delta isoform, mRNA (cDNA clone MGC:62239 IMAGE:5689560), complete cds Length = 2908 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 590 gtgaagcctttctgcttctt 571
>ref|NM_016910.2| Mus musculus protein phosphatase 1D magnesium-dependent, delta isoform (Ppm1d), mRNA Length = 2908 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 590 gtgaagcctttctgcttctt 571
>ref|XM_001002394.1| PREDICTED: Mus musculus protein phosphatase 1D magnesium-dependent, delta isoform (Ppm1d), mRNA Length = 2663 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 359 gtgaagcctttctgcttctt 340
>ref|XM_988873.1| PREDICTED: Mus musculus protein phosphatase 1D magnesium-dependent, delta isoform (Ppm1d), mRNA Length = 2951 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 632 gtgaagcctttctgcttctt 613
>gb|AY492003.1| Glycine max proline dehydrogenase (PDH) mRNA, complete cds Length = 1494 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ggcggcggcggcgtcctcgc 502 |||||||||||||||||||| Sbjct: 411 ggcggcggcggcgtcctcgc 392
>ref|XM_741903.1| Aspergillus fumigatus Af293 beta-glucosidase (Afu8g02100) partial mRNA Length = 2421 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ttcctcttcttgctgctgcc 346 |||||||||||||||||||| Sbjct: 14 ttcctcttcttgctgctgcc 33
>ref|XM_851866.1| PREDICTED: Canis familiaris similar to Peptidyl-prolyl cis-trans isomerase E (PPIase E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33), transcript variant 3 (LOC607232), mRNA Length = 1159 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 616 tcgtccacctcctccgcgagcccacctacgta 647 |||||||||||||| || |||||||| ||||| Sbjct: 63 tcgtccacctcctctgccagcccacccacgta 32
>ref|XM_843646.1| PREDICTED: Canis familiaris similar to Peptidyl-prolyl cis-trans isomerase E (PPIase E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33), transcript variant 2 (LOC607232), mRNA Length = 1216 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 616 tcgtccacctcctccgcgagcccacctacgta 647 |||||||||||||| || |||||||| ||||| Sbjct: 81 tcgtccacctcctctgccagcccacccacgta 50
>gb|AY392576.1| Chlorurus sordidus isolate Sey1 mitochondrial D-loop, partial sequence Length = 348 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 caaaccaagtatccgcatcc 369 |||||||||||||||||||| Sbjct: 200 caaaccaagtatccgcatcc 219
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 aggcgcttcatttcctcttc 335 |||||||||||||||||||| Sbjct: 2416564 aggcgcttcatttcctcttc 2416583
>gb|AC083905.20| Homo sapiens 3 BAC RP11-124N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109471 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 tgcttctttcattgctgcattctg 305 |||||||||||||||| ||||||| Sbjct: 61571 tgcttctttcattgcttcattctg 61548
>emb|BX323026.5| Mouse DNA sequence from clone RP24-95F14 on chromosome 11 Contains the Ppm1d gene for magnesium-dependent protein phosphatase 1D delta isoform, the 5' end of the Bcas3 gene for breast carcinoma amplified sequence 3 and a CpG island, complete sequence Length = 130030 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 48576 gtgaagcctttctgcttctt 48557
>emb|BX000470.24| Zebrafish DNA sequence from clone DKEY-16N16 in linkage group 1, complete sequence Length = 237809 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 tctttcattgctgcattctg 305 |||||||||||||||||||| Sbjct: 104013 tctttcattgctgcattctg 103994
>gb|AF443352.1| Enterococcus faecium strain E0179 ST2 glyceraldehyde-3-phosphate dehydrogenase (gyd) gene, partial cds Length = 395 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gcttctttcattgctgcatt 302 |||||||||||||||||||| Sbjct: 288 gcttctttcattgctgcatt 269
>gb|AF443350.1| Enterococcus faecium strain E0446 ST13 glyceraldehyde-3-phosphate dehydrogenase (gyd) gene, partial cds Length = 395 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gcttctttcattgctgcatt 302 |||||||||||||||||||| Sbjct: 288 gcttctttcattgctgcatt 269
>gb|AF443348.1| Enterococcus faecium strain E0013 ST18 glyceraldehyde-3-phosphate dehydrogenase (gyd) gene, partial cds Length = 395 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gcttctttcattgctgcatt 302 |||||||||||||||||||| Sbjct: 288 gcttctttcattgctgcatt 269
>gb|AF443347.1| Enterococcus faecium strain A022 ST38 glyceraldehyde-3-phosphate dehydrogenase (gyd) gene, partial cds Length = 395 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gcttctttcattgctgcatt 302 |||||||||||||||||||| Sbjct: 288 gcttctttcattgctgcatt 269
>gb|AF443344.1| Enterococcus faecium strain E0158 ST16 glyceraldehyde-3-phosphate dehydrogenase (gyd) gene, partial cds Length = 395 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gcttctttcattgctgcatt 302 |||||||||||||||||||| Sbjct: 288 gcttctttcattgctgcatt 269
>gb|AC087277.11| Homo sapiens chromosome 11, clone RP11-514F3, complete sequence Length = 196859 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 taacagcctctagttcacgg 196 |||||||||||||||||||| Sbjct: 48843 taacagcctctagttcacgg 48862
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 tttcctcttcttgctgctgcctct 349 |||||| ||||||||||||||||| Sbjct: 2764425 tttcctgttcttgctgctgcctct 2764402
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 aggcgcttcatttcctcttc 335 |||||||||||||||||||| Sbjct: 1952716 aggcgcttcatttcctcttc 1952697
>dbj|AK157818.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130063B11 product:protein phosphatase 1D magnesium-dependent, delta isoform, full insert sequence Length = 2876 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 578 gtgaagcctttctgcttctt 559
>dbj|AK166632.1| Mus musculus morula whole body morula cDNA, RIKEN full-length enriched library, clone:I0C0043E08 product:protein phosphatase 1D magnesium-dependent, delta isoform, full insert sequence Length = 1342 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 220 gtgaagcctttctgcttctt 201
>gb|AC026782.6| Homo sapiens chromosome 5 clone CTD-2015A6, complete sequence Length = 214025 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 tcatttcctcttcttgctgctgcc 346 ||||||||||| |||||||||||| Sbjct: 73255 tcatttcctctccttgctgctgcc 73278
>dbj|AK171714.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830006E16 product:protein phosphatase 1D magnesium-dependent, delta isoform, full insert sequence Length = 2868 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 570 gtgaagcctttctgcttctt 551
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 cggcggcggcgtcctcgcgc 504 |||||||||||||||||||| Sbjct: 2738418 cggcggcggcgtcctcgcgc 2738399 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 483 ggcggcggcggcgtcctcgcgctc 506 ||||||||||||| |||||||||| Sbjct: 1457080 ggcggcggcggcggcctcgcgctc 1457103
>dbj|AK051509.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130053L12 product:protein phosphatase 1D magnesium-dependent, delta isoform, full insert sequence Length = 3165 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 484 gtgaagcctttctgcttctt 465
>dbj|AK050831.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030023K16 product:protein phosphatase 1D magnesium-dependent, delta isoform, full insert sequence Length = 1205 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 482 gtgaagcctttctgcttctt 463
>dbj|AK053727.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130303A03 product:protein phosphatase 1D magnesium-dependent, delta isoform, full insert sequence Length = 2497 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 463 gtgaagcctttctgcttctt 444
>gb|AC158681.3| Mus musculus 6 BAC RP23-338E5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202460 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 cccatccctgctcccctccc 408 |||||||||||||||||||| Sbjct: 122498 cccatccctgctcccctccc 122517
>dbj|AK029910.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4931436F15 product:hypothetical protein, full insert sequence Length = 1955 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 218 gtgaagcctttctgcttctt 237
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttttctgcagctactttctc 266 |||||||||||||||||||| Sbjct: 30307273 ttttctgcagctactttctc 30307292 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ggcggcggcggcgtcctcgc 502 |||||||||||||||||||| Sbjct: 7198740 ggcggcggcggcgtcctcgc 7198721
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 ccatggcggcggcggcgtcc 498 |||||||||||||||||||| Sbjct: 568362 ccatggcggcggcggcgtcc 568381
>ref|XM_213418.3| PREDICTED: Rattus norvegicus protein phosphatase 1D magnesium-dependent, delta isoform (predicted) (Ppm1d_predicted), mRNA Length = 3212 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 884 gtgaagcctttctgcttctt 865
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 tcttctcgtccacctcctcc 630 |||||||||||||||||||| Sbjct: 359660 tcttctcgtccacctcctcc 359679
>gb|AF200464.1|AF200464 Mus musculus p53-induced protein phosphatase 1 (Wip1) mRNA, complete cds Length = 1968 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gtgaagcctttctgcttctt 289 |||||||||||||||||||| Sbjct: 371 gtgaagcctttctgcttctt 352
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 cggcggcgtcctcgcgctcg 507 |||||||||||||||||||| Sbjct: 4787512 cggcggcgtcctcgcgctcg 4787493
>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0535F09 Length = 175050 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttttctgcagctactttctc 266 |||||||||||||||||||| Sbjct: 173608 ttttctgcagctactttctc 173627
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttttctgcagctactttctc 266 |||||||||||||||||||| Sbjct: 53868 ttttctgcagctactttctc 53887
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ggcggcggcggcgtcctcgc 502 |||||||||||||||||||| Sbjct: 76151 ggcggcggcggcgtcctcgc 76132
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ggcggcggcggcgtcctcgc 502 |||||||||||||||||||| Sbjct: 33744 ggcggcggcggcgtcctcgc 33725
>gb|AC004974.1|AC004974 Homo sapiens PAC clone RP5-1140G11 from 14q24.3, complete sequence Length = 112831 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 caagaaataggattagttaa 79 |||||||||||||||||||| Sbjct: 62029 caagaaataggattagttaa 62048
>dbj|AK073747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068K18, full insert sequence Length = 1961 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ttttctgcagctactttctc 266 |||||||||||||||||||| Sbjct: 1781 ttttctgcagctactttctc 1800
>gb|AC103618.6| Mus musculus chromosome 1, clone RP24-202B6, complete sequence Length = 141016 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 cccatccctgctcccctccc 408 |||||||||||||||||||| Sbjct: 116419 cccatccctgctcccctccc 116438
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 485 cggcggcggcgtcctcgcgctcga 508 ||||||||||||| |||||||||| Sbjct: 86613 cggcggcggcgtcgtcgcgctcga 86636
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 tcttctcgtccacctcctcc 630 |||||||||||||||||||| Sbjct: 8755 tcttctcgtccacctcctcc 8774
>gb|AC146753.1| Gallus gallus BAC clone CH261-4N19 from chromosome unknown, complete sequence Length = 231376 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tcatccgtttcaccgttcttttct 252 ||||||||||||| |||||||||| Sbjct: 109354 tcatccgtttcacagttcttttct 109377
>emb|AJ292081.1|ECA292081 Equus caballus mRNA for intestinal Na+/glucose co-transporter (sglt1 gene) Length = 2172 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tgtccatggcggcggcggcg 495 |||||||||||||||||||| Sbjct: 29 tgtccatggcggcggcggcg 10
>gb|AC104451.2| Homo sapiens chromosome 3 clone RP11-632N2, complete sequence Length = 173103 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ctcttcttgctgctgcctct 349 |||||||||||||||||||| Sbjct: 164746 ctcttcttgctgctgcctct 164765 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,464,686 Number of Sequences: 3902068 Number of extensions: 6464686 Number of successful extensions: 168890 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 165978 Number of HSP's gapped (non-prelim): 2912 length of query: 669 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 646 effective length of database: 17,143,297,704 effective search space: 11074570316784 effective search space used: 11074570316784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)