ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal8k20 |
|---|---|
| Clone Library Name | barley_pub |
>KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-associated protein| 5.4) (Ultrahigh sulfur keratin-associated protein 5.4) Length = 288 Score = 27.3 bits (59), Expect(2) = 2.3 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = -1 Query: 100 CCKPFCCIXMRCXP 59 CCKP+CC C P Sbjct: 239 CCKPYCCQSSCCKP 252 Score = 20.8 bits (42), Expect(2) = 2.3 Identities = 6/16 (37%), Positives = 7/16 (43%) Frame = -2 Query: 195 CCSGXCIVPCSVPT*C 148 CC C PC + C Sbjct: 215 CCQSSCCKPCCSSSGC 230
>KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-associated| protein 10.2) (High sulfur keratin-associated protein 10.2) (Keratin-associated protein 18-2) (Keratin-associated protein 18.2) Length = 255 Score = 26.6 bits (57), Expect(2) = 2.4 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = -1 Query: 100 CCKPFCCIXMRCXP 59 CCKP CC + C P Sbjct: 187 CCKPVCCKSICCVP 200 Score = 21.6 bits (44), Expect(2) = 2.4 Identities = 8/19 (42%), Positives = 8/19 (42%) Frame = -2 Query: 204 PIXCCSGXCIVPCSVPT*C 148 P C S C C VP C Sbjct: 128 PACCASSSCQQSCRVPVCC 146
>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein| 9.2) (Ultrahigh sulfur keratin-associated protein 9.2) Length = 174 Score = 24.3 bits (51), Expect(2) = 2.4 Identities = 8/16 (50%), Positives = 8/16 (50%) Frame = -2 Query: 195 CCSGXCIVPCSVPT*C 148 CC C PC PT C Sbjct: 42 CCVSSCCQPCCRPTSC 57 Score = 23.9 bits (50), Expect(2) = 2.4 Identities = 7/14 (50%), Positives = 8/14 (57%) Frame = -1 Query: 100 CCKPFCCIXMRCXP 59 CC+P CC C P Sbjct: 75 CCQPSCCSTPCCQP 88
>KRA98_HUMAN (Q9BYQ0) Keratin-associated protein 9-8 (Keratin-associated protein| 9.8) (Ultrahigh sulfur keratin-associated protein 9.8) Length = 159 Score = 24.3 bits (51), Expect(2) = 2.5 Identities = 8/16 (50%), Positives = 8/16 (50%) Frame = -2 Query: 195 CCSGXCIVPCSVPT*C 148 CC C PC PT C Sbjct: 37 CCVSSCCQPCCRPTCC 52 Score = 23.9 bits (50), Expect(2) = 2.5 Identities = 7/14 (50%), Positives = 8/14 (57%) Frame = -1 Query: 100 CCKPFCCIXMRCXP 59 CC+P CC C P Sbjct: 65 CCQPSCCSTPCCQP 78
>KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-associated protein| 9.3) (Ultrahigh sulfur keratin-associated protein 9.3) Length = 159 Score = 24.3 bits (51), Expect(2) = 2.5 Identities = 8/16 (50%), Positives = 8/16 (50%) Frame = -2 Query: 195 CCSGXCIVPCSVPT*C 148 CC C PC PT C Sbjct: 37 CCVSSCCQPCCHPTCC 52 Score = 23.9 bits (50), Expect(2) = 2.5 Identities = 7/14 (50%), Positives = 8/14 (57%) Frame = -1 Query: 100 CCKPFCCIXMRCXP 59 CC+P CC C P Sbjct: 70 CCQPSCCSTPCCQP 83
>KRA94_HUMAN (Q9BYQ2) Keratin-associated protein 9-4 (Keratin-associated protein| 9.4) (Ultrahigh sulfur keratin-associated protein 9.4) Length = 154 Score = 24.3 bits (51), Expect(2) = 2.5 Identities = 8/16 (50%), Positives = 8/16 (50%) Frame = -2 Query: 195 CCSGXCIVPCSVPT*C 148 CC C PC PT C Sbjct: 42 CCVSSCCQPCCRPTCC 57 Score = 23.9 bits (50), Expect(2) = 2.5 Identities = 7/14 (50%), Positives = 8/14 (57%) Frame = -1 Query: 100 CCKPFCCIXMRCXP 59 CC+P CC C P Sbjct: 70 CCQPSCCSTPCCQP 83
>KR109_HUMAN (P60411) Keratin-associated protein 10-9 (Keratin-associated| protein 10.9) (High sulfur keratin-associated protein 10.9) (Keratin-associated protein 18-9) (Keratin-associated protein 18.9) Length = 292 Score = 25.8 bits (55), Expect(2) = 3.9 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = -1 Query: 100 CCKPFCCIXMRCXP 59 CCKP CC + C P Sbjct: 187 CCKPVCCKPICCVP 200 Score = 25.8 bits (55), Expect(2) = 6.4 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = -1 Query: 100 CCKPFCCIXMRC 65 CCKP CC+ + C Sbjct: 104 CCKPVCCVPVCC 115 Score = 21.6 bits (44), Expect(2) = 3.9 Identities = 8/19 (42%), Positives = 8/19 (42%) Frame = -2 Query: 204 PIXCCSGXCIVPCSVPT*C 148 P C S C C VP C Sbjct: 128 PACCASSSCQPACCVPVCC 146 Score = 20.8 bits (42), Expect(2) = 6.4 Identities = 8/19 (42%), Positives = 8/19 (42%) Frame = -2 Query: 204 PIXCCSGXCIVPCSVPT*C 148 P C S C C VP C Sbjct: 87 PAYCTSSPCQQACCVPVCC 105
>KR510_HUMAN (Q6L8G5) Keratin-associated protein 5-10 (Keratin-associated| protein 5.10) (Ultrahigh sulfur keratin-associated protein 5.10) Length = 202 Score = 25.4 bits (54), Expect(2) = 5.1 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -1 Query: 100 CCKPFCCIXMRCXP 59 CCKP CC C P Sbjct: 182 CCKPCCCQSSCCVP 195 Score = 21.6 bits (44), Expect(2) = 5.1 Identities = 6/18 (33%), Positives = 8/18 (44%) Frame = -2 Query: 195 CCSGXCIVPCSVPT*CII 142 CC C PC + C + Sbjct: 157 CCQSSCCNPCCCQSSCCV 174
>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein| 5.2) (Ultrahigh sulfur keratin-associated protein 5.2) (Keratin-associated protein 5-8) (Keratin-associated protein 5.8) Length = 177 Score = 25.0 bits (53), Expect(2) = 5.2 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -1 Query: 100 CCKPFCCIXMRCXP 59 CCKP CC C P Sbjct: 157 CCKPCCCQSNCCVP 170 Score = 21.9 bits (45), Expect(2) = 5.2 Identities = 6/18 (33%), Positives = 8/18 (44%) Frame = -2 Query: 195 CCSGXCIVPCSVPT*CII 142 CC C PC + C + Sbjct: 132 CCQSSCCKPCCCQSSCCV 149
>KR103_HUMAN (P60369) Keratin-associated protein 10-3 (Keratin-associated| protein 10.3) (High sulfur keratin-associated protein 10.3) (Keratin-associated protein 18-3) (Keratin-associated protein 18.3) Length = 221 Score = 28.1 bits (61), Expect = 6.1 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -1 Query: 100 CCKPFCCIXMRCXP 59 CCKP CC+ + C P Sbjct: 104 CCKPVCCVPVCCKP 117 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,408,615 Number of Sequences: 219361 Number of extensions: 283730 Number of successful extensions: 868 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 425 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 859 length of database: 80,573,946 effective HSP length: 66 effective length of database: 66,096,120 effective search space used: 1586306880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
