ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal39l20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB057651.1| Oryza sativa (japonica cultivar-group) mRNA for ... 577 e-161
2dbj|AK121737.1| Oryza sativa (japonica cultivar-group) cDNA clon... 561 e-156
3dbj|AK067379.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 3e-80
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 188 2e-44
5dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic D... 188 2e-44
6ref|XM_853773.1| PREDICTED: Canis familiaris similar to amyotrop... 46 0.15
7ref|XM_536030.2| PREDICTED: Canis familiaris similar to amyotrop... 46 0.15
8emb|AL591504.5| Human DNA sequence from clone RP11-445J9 on chro... 44 0.60
9gb|AC102444.8| Mus musculus chromosome 1, clone RP24-196I15, com... 42 2.4
10ref|XM_958501.1| Neurospora crassa OR74A related to histone-lysi... 42 2.4
11ref|XM_330849.1| Neurospora crassa OR74A related to histone-lysi... 42 2.4
12gb|AC158964.4| Mus musculus chromosome 1, clone RP23-376B19, com... 42 2.4
13gb|AC132580.2| Mus musculus BAC clone RP24-388H18 from chromosom... 42 2.4
14gb|AC166078.2| Mus musculus BAC clone RP23-13G1 from chromosome ... 42 2.4
15emb|BX842595.1| Neurospora crassa DNA linkage group II BAC clone... 42 2.4
16emb|AL513409.1|NCB11O9 Neurospora crassa DNA linkage group II BA... 42 2.4
17ref|NM_001027898.1| Caenorhabditis elegans C47A4.2b (C47A4.2) mR... 42 2.4
18ref|NM_001027897.1| Caenorhabditis elegans C47A4.2a (C47A4.2) mR... 42 2.4
19emb|Z82263.1|CEC47A4 Caenorhabditis elegans Cosmid C47A4, comple... 42 2.4
20gb|AC147631.3| Mus musculus BAC clone RP23-341H6 from 9, complet... 42 2.4
21gb|AC148089.8| Mus musculus chromosome 8, clone RP24-366L10, com... 40 9.4
22gb|AC130673.10| Mus musculus chromosome 15, clone RP24-97F15, co... 40 9.4
23ref|XM_427077.1| PREDICTED: Gallus gallus LOC429520 (LOC429520),... 40 9.4
24ref|XM_425418.1| PREDICTED: Gallus gallus similar to leucine-ric... 40 9.4
25gb|AC168205.7| Mus musculus chromosome 8, clone RP23-478P10, com... 40 9.4
26gb|AC147144.2| Pan troglodytes BAC clone CH251-278J22 from Y, co... 40 9.4
27emb|CT027995.2| Wallaby DNA sequence from clone MEKBa-583L10, co... 40 9.4
28gb|BC014723.1| Mus musculus phosphodiesterase 6G, cGMP-specific,... 40 9.4
29gb|AC096035.6| Rattus norvegicus 4 BAC CH230-16M16 (Children's H... 40 9.4
30emb|AL732509.4| Human DNA sequence from clone CTD-2245E12 on chr... 40 9.4
31emb|AL356133.17| Human DNA sequence from clone RP11-337A23 on ch... 40 9.4
32emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genom... 40 9.4
33emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4,... 40 9.4
34gb|AY988145.1| Felis catus clone FCA744 microsatellite sequence 40 9.4
35emb|BX072541.1| Mouse DNA sequence from clone RP23-189G9 on chro... 40 9.4
36emb|AL606965.20| Mouse DNA sequence from clone RP23-313I15 on ch... 40 9.4
37gb|AC134420.8| Mus musculus chromosome 15, clone RP23-478J5, com... 40 9.4
38dbj|BS000638.2| Pan troglodytes chromosome Y clone: PTBY-011C06,... 40 9.4
39dbj|BS000637.2| Pan troglodytes chromosome Y clone: PTBY-009K23,... 40 9.4
40dbj|BS000660.1| Pan troglodytes chromosome Y clone:PTBY-005M17, ... 40 9.4
41gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 9.4
42gb|AC182634.3| Gallus gallus BAC clone CH261-141O9 from chromoso... 40 9.4
43gb|AC182764.2| Gallus gallus BAC clone CH261-140B3 from chromoso... 40 9.4
44gb|AC182737.1| Gasterosteus aculeatus clone VMRC26-154C03, compl... 40 9.4
45gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, geno... 40 9.4
46gb|AC162947.2| Mus musculus BAC clone RP23-12D16 from chromosome... 40 9.4
47dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
48gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome... 40 9.4
49emb|AJ326914.1|HSA326914 Homo sapiens genomic sequence surroundi... 40 9.4
50emb|AL139022.4|CNS01DX4 Human chromosome 14 DNA sequence BAC R-8... 40 9.4
51gb|AY919674.1| Homo sapiens amyloid beta (A4) precursor protein ... 40 9.4
52dbj|AP001695.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 9.4
53gb|AC134855.5| Mus musculus BAC clone RP24-301M10 from 8, comple... 40 9.4
54gb|AC145949.3| Gallus gallus BAC clone CH261-29A22 from chromoso... 40 9.4
55gb|AF025396.1|AF025396 Vibrio anguillarum rfb region, partial se... 40 9.4
56gb|AC152164.14| Mus musculus chromosome 8, clone RP24-118N20, co... 40 9.4
57emb|AL669855.20| Mouse DNA sequence from clone RP23-82I5 on chro... 40 9.4
58dbj|AP000141.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL... 40 9.4
59dbj|D87675.1| Homo sapiens DNA for amyloid precursor protein, co... 40 9.4
60dbj|AP001442.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 9.4
61dbj|AP000089.1| Homo sapiens genomic DNA of 21q22.1, APP related... 40 9.4 
>dbj|AB057651.1| Oryza sativa (japonica cultivar-group) mRNA for putative
            TPR-containing nuclear phosphoprotein, complete cds
          Length = 3993

 Score =  577 bits (291), Expect = e-161
 Identities = 591/689 (85%), Gaps = 4/689 (0%)
 Strand = Plus / Minus

                                                                        
Query: 4    tagtccgggtacttgaaaataatgagacggtaaaggtggctggctttcacagtatcatga 63
            ||||| || ||||||||||||||||| ||||||| | | |||||||||||||||||||| 
Sbjct: 1894 tagtctggatacttgaaaataatgaggcggtaaaagagactggctttcacagtatcatgg 1835

                                                                        
Query: 64   agctcttccaataatcttgcatagttaaacaatgtggtgactttatcgcagggtaattca 123
            |||||||| || ||||||||||||||||||||||| ||||| ||||| || |||||||||
Sbjct: 1834 agctcttcaaacaatcttgcatagttaaacaatgtagtgaccttatcccaaggtaattca 1775

                                                                        
Query: 124  agaggtatg---ttttcttcaagttggtgaaacaaactctgatccctgtattgcacactc 180
            |||||| |    | |||||||||||| ||||| |||||||| ||||| || || | ||||
Sbjct: 1774 agaggtgttccctcttcttcaagttgttgaaaaaaactctggtccctatactgaatactc 1715

                                                                        
Query: 181  cagtttaccatggaactaccagcagtcccatccataattgaaacccagataccgtcccct 240
            ||||| |||| ||| |||||  || | ||||| |||||||||||||| |  || || || 
Sbjct: 1714 cagttaaccacggagctacctacactgccatctataattgaaacccaaaagccatctcca 1655

                                                                        
Query: 241  agagcttccttaaaactttgctcagccaactcgaactctgccttctcaaaataaagaagt 300
            || ||||||||||||||||| ||||||| ||| | |||| |||||||||||| ||| |||
Sbjct: 1654 agtgcttccttaaaactttgttcagccatctcaagctctcccttctcaaaatgaagtagt 1595

                                                                        
Query: 301  ccaattccattgagcaattcaactggtactttctctcctgccttccttaggagaatacat 360
            ||||||||||||||||||||||  |||| |||||||||||||||| |||||||| | |  
Sbjct: 1594 ccaattccattgagcaattcaatgggtattttctctcctgccttctttaggagattccga 1535

                                                                        
Query: 361  gctgtctttaagtattccatggcagcagcccaatcagattctaccaacaattcaccaagt 420
            ||||| |||||||||||||| |||| |||||||||||||| |||||| |||||||| || 
Sbjct: 1534 gctgtttttaagtattccatagcagtagcccaatcagattgtaccaataattcacctagc 1475

                                                                        
Query: 421  tcaacaaatgcctggtgatcttttggatcaatccgtgtaactttcttaaaggtctctatg 480
            || | ||||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 1474 tccataaatgcctgatgatcttttggatcaatccgggtaaccttcttgaaggtttctata 1415

                                                                        
Query: 481  gctttgtcattctcacccaaatttgaatagatgttcccaatagccttcaaactttcacaa 540
            |||||||||||||||||  | |||| ||| |||| |||||||||||| ||||||||||||
Sbjct: 1414 gctttgtcattctcacctgactttgcatatatgtgcccaatagcctttaaactttcacaa 1355

                                                                        
Query: 541  ttttcagggtgtacctccagcactttctcaaagctagctaaggaacgtttgaagtcacca 600
            ||||| ||||| ||||||| ||||||||||||||||||||| |||| |||| ||||  ||
Sbjct: 1354 ttttctgggtgcacctccaacactttctcaaagctagctaatgaacttttgtagtctgca 1295

                                                                        
Query: 601  aattttaattgtatttgaccaaggccaacaaatggcaacacaaagtcttgcggtttattg 660
            |||||||||||||| |||||||| ||||  ||||||||||||||||| || || ||| ||
Sbjct: 1294 aattttaattgtatctgaccaagtccaaagaatggcaacacaaagtcctgtggcttactg 1235

                                         
Query: 661  accttctttgacagatgctatataatacc 689
            |  ||| ||||||||||| ||||||||||
Sbjct: 1234 a-tttcattgacagatgccatataatacc 1207
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>dbj|AK121737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084J09, full
            insert sequence
          Length = 3917

 Score =  561 bits (283), Expect = e-156
 Identities = 589/689 (85%), Gaps = 4/689 (0%)
 Strand = Plus / Minus

                                                                        
Query: 4    tagtccgggtacttgaaaataatgagacggtaaaggtggctggctttcacagtatcatga 63
            ||||| || ||||||||||||||||| ||||||| | | |||||||||||||||||||| 
Sbjct: 2036 tagtctggatacttgaaaataatgaggcggtaaaagagactggctttcacagtatcatgg 1977

                                                                        
Query: 64   agctcttccaataatcttgcatagttaaacaatgtggtgactttatcgcagggtaattca 123
            |||||||| || ||||||||||||||||||||||| ||||| ||||| || |||||||||
Sbjct: 1976 agctcttcaaacaatcttgcatagttaaacaatgtagtgaccttatcccaaggtaattca 1917

                                                                        
Query: 124  agaggtatg---ttttcttcaagttggtgaaacaaactctgatccctgtattgcacactc 180
            |||||| |    | |||||||||||| ||||| |||||||| ||||| || || | ||||
Sbjct: 1916 agaggtgttccctcttcttcaagttgttgaaaaaaactctggtccctatactgaatactc 1857

                                                                        
Query: 181  cagtttaccatggaactaccagcagtcccatccataattgaaacccagataccgtcccct 240
            ||||| |||| ||| |||||  || | ||||| |||||||||||||| |  || || || 
Sbjct: 1856 cagttaaccacggagctacctacactgccatctataattgaaacccaaaagccatctcca 1797

                                                                        
Query: 241  agagcttccttaaaactttgctcagccaactcgaactctgccttctcaaaataaagaagt 300
            || ||||||||||||||||| ||||||| ||| | |||| |||||||||||| ||| |||
Sbjct: 1796 agtgcttccttaaaactttgttcagccatctcaagctctcccttctcaaaatgaagtagt 1737

                                                                        
Query: 301  ccaattccattgagcaattcaactggtactttctctcctgccttccttaggagaatacat 360
            ||||||||||||||||||||||  |||| |||||||||||||||| |||||||| |    
Sbjct: 1736 ccaattccattgagcaattcaatgggtattttctctcctgccttctttaggagattctga 1677

                                                                        
Query: 361  gctgtctttaagtattccatggcagcagcccaatcagattctaccaacaattcaccaagt 420
            ||||| |||||||||||||| |||| |||||||||||||| |||||| |||||||| || 
Sbjct: 1676 gctgtttttaagtattccatagcagtagcccaatcagattgtaccaataattcacctagc 1617

                                                                        
Query: 421  tcaacaaatgcctggtgatcttttggatcaatccgtgtaactttcttaaaggtctctatg 480
            || | ||||||||| |||||||||||||||| ||| ||||| ||||| ||||| ||||| 
Sbjct: 1616 tccataaatgcctgatgatcttttggatcaacccgggtaaccttcttgaaggtttctata 1557

                                                                        
Query: 481  gctttgtcattctcacccaaatttgaatagatgttcccaatagccttcaaactttcacaa 540
            |||||||||||||||||  | |||| ||| |||| |||||||||||| ||||||||||||
Sbjct: 1556 gctttgtcattctcacctgactttgcatatatgtgcccaatagcctttaaactttcacaa 1497

                                                                        
Query: 541  ttttcagggtgtacctccagcactttctcaaagctagctaaggaacgtttgaagtcacca 600
            ||||| ||||| ||||||| ||||||||||||||||||||| |||| |||| ||||  ||
Sbjct: 1496 ttttctgggtgcacctccaacactttctcaaagctagctaatgaacttttgtagtctgca 1437

                                                                        
Query: 601  aattttaattgtatttgaccaaggccaacaaatggcaacacaaagtcttgcggtttattg 660
            |||||||||||||| |||||||| ||||  ||||||||||||||||| || || ||| ||
Sbjct: 1436 aattttaattgtatctgaccaagtccaaagaatggcaacacaaagtcctgtggcttactg 1377

                                         
Query: 661  accttctttgacagatgctatataatacc 689
            |  ||| ||||||||||| ||||||||||
Sbjct: 1376 a-tttcattgacagatgccatataatacc 1349
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>dbj|AK067379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102L05, full
            insert sequence
          Length = 4157

 Score =  307 bits (155), Expect = 3e-80
 Identities = 282/323 (87%), Gaps = 1/323 (0%)
 Strand = Plus / Minus

                                                                        
Query: 367  tttaagtattccatggcagcagcccaatcagattctaccaacaattcaccaagttcaaca 426
            |||||||||||||| |||| |||||||||||||| |||||| |||||||| || || | |
Sbjct: 1671 tttaagtattccatagcagtagcccaatcagattgtaccaataattcacctagctccata 1612

                                                                        
Query: 427  aatgcctggtgatcttttggatcaatccgtgtaactttcttaaaggtctctatggctttg 486
            |||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||||
Sbjct: 1611 aatgcctgatgatcttttggatcaatccgggtaaccttcttgaaggtttctatagctttg 1552

                                                                        
Query: 487  tcattctcacccaaatttgaatagatgttcccaatagccttcaaactttcacaattttca 546
            |||||||||||  | |||| ||| |||| |||||||||||| ||||||||||||||||| 
Sbjct: 1551 tcattctcacctgactttgcatatatgtgcccaatagcctttaaactttcacaattttct 1492

                                                                        
Query: 547  gggtgtacctccagcactttctcaaagctagctaaggaacgtttgaagtcaccaaatttt 606
            ||||| ||||||| ||||||||||||||||||||| |||| |||| ||||  ||||||||
Sbjct: 1491 gggtgcacctccaacactttctcaaagctagctaatgaacttttgtagtctgcaaatttt 1432

                                                                        
Query: 607  aattgtatttgaccaaggccaacaaatggcaacacaaagtcttgcggtttattgaccttc 666
            |||||||| |||||||| ||||  ||||||||||||||||| || || ||| |||  |||
Sbjct: 1431 aattgtatctgaccaagtccaaagaatggcaacacaaagtcctgtggcttactga-tttc 1373

                                   
Query: 667  tttgacagatgctatataatacc 689
             ||||||||||| ||||||||||
Sbjct: 1372 attgacagatgccatataatacc 1350



 Score =  270 bits (136), Expect = 6e-69
 Identities = 301/354 (85%), Gaps = 4/354 (1%)
 Strand = Plus / Minus

                                                                        
Query: 4    tagtccgggtacttgaaaataatgagacggtaaaggtggctggctttcacagtatcatga 63
            ||||| || ||||||||||||||||| ||||||| | | |||||||||||||||||||| 
Sbjct: 2043 tagtctggatacttgaaaataatgaggcggtaaaagagactggctttcacagtatcatgg 1984

                                                                        
Query: 64   agctcttccaataatcttgcatagttaaacaatgtggtgactttatcgcagggtaattca 123
            |||||||| || |||||||||||||||| |||||| ||||| ||||| || |||||||||
Sbjct: 1983 agctcttcaaacaatcttgcatagttaa-caatgtagtgaccttatcccaaggtaattca 1925

                                                                        
Query: 124  agaggtatg---ttttcttcaagttggtgaaacaaactctgatccctgtattgcacactc 180
            |||||| |    | |||||||||||| ||||| |||||||| ||||| || || | ||||
Sbjct: 1924 agaggtgttccctcttcttcaagttgttgaaaaaaactctggtccctatactgaatactc 1865

                                                                        
Query: 181  cagtttaccatggaactaccagcagtcccatccataattgaaacccagataccgtcccct 240
            ||||| |||| ||| |||||  || | ||||| |||||||||||||| |  || || || 
Sbjct: 1864 cagttaaccacggagctacctacactgccatctataattgaaacccaaaagccatctcca 1805

                                                                        
Query: 241  agagcttccttaaaactttgctcagccaactcgaactctgccttctcaaaataaagaagt 300
            || ||||||||||||||||| ||||||| ||| | |||| |||||||||||| ||| |||
Sbjct: 1804 agtgcttccttaaaactttgttcagccatctcaagctctcccttctcaaaatgaagtagt 1745

                                                                  
Query: 301  ccaattccattgagcaattcaactggtactttctctcctgccttccttaggaga 354
            ||||||||||||||||||||||  |||| |||||||||||||||| ||||||||
Sbjct: 1744 ccaattccattgagcaattcaatgggtattttctctcctgccttctttaggaga 1691
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  188 bits (95), Expect = 2e-44
 Identities = 217/257 (84%), Gaps = 3/257 (1%)
 Strand = Plus / Plus

                                                                            
Query: 15       cttgaaaataatgagacggtaaaggtggctggctttcacagtatcatgaagctcttccaa 74
                ||||||||||||||| ||||||| | | |||||||||||||||||||| |||||||| ||
Sbjct: 17182837 cttgaaaataatgaggcggtaaaagagactggctttcacagtatcatggagctcttcaaa 17182896

                                                                            
Query: 75       taatcttgcatagttaaacaatgtggtgactttatcgcagggtaattcaagaggtat--- 131
                 ||||||||||||||||||||||| ||||| ||||| || ||||||||||||||| |   
Sbjct: 17182897 caatcttgcatagttaaacaatgtagtgaccttatcccaaggtaattcaagaggtgttcc 17182956

                                                                            
Query: 132      gttttcttcaagttggtgaaacaaactctgatccctgtattgcacactccagtttaccat 191
                 | |||||||||||| ||||| |||||||| ||||| || || | ||||||||| |||| 
Sbjct: 17182957 ctcttcttcaagttgttgaaaaaaactctggtccctatactgaatactccagttaaccac 17183016

                                                                            
Query: 192      ggaactaccagcagtcccatccataattgaaacccagataccgtcccctagagcttcctt 251
                ||| |||||  || | ||||| |||||||||||||| |  || || || || ||||||||
Sbjct: 17183017 ggagctacctacactgccatctataattgaaacccaaaagccatctccaagtgcttcctt 17183076

                                 
Query: 252      aaaactttgctcagcca 268
                ||||||||| |||||||
Sbjct: 17183077 aaaactttgttcagcca 17183093



 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                            
Query: 524      ccttcaaactttcacaattttcagggtgtacctccagcactttctcaaagctagctaagg 583
                |||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| |
Sbjct: 17184998 cctttaaactttcacaattttctgggtgcacctccaacactttctcaaagctagctaatg 17185057

                                                        
Query: 584      aacgtttgaagtcaccaaattttaattgtatttgaccaag 623
                ||| |||| ||||  |||||||||||||||| ||||||||
Sbjct: 17185058 aacttttgtagtctgcaaattttaattgtatctgaccaag 17185097



 Score =  101 bits (51), Expect = 3e-18
 Identities = 72/79 (91%)
 Strand = Plus / Plus

                                                                            
Query: 276      ctctgccttctcaaaataaagaagtccaattccattgagcaattcaactggtactttctc 335
                |||| |||||||||||| ||| |||||||||||||||||||||||||  |||| ||||||
Sbjct: 17183179 ctctcccttctcaaaatgaagtagtccaattccattgagcaattcaatgggtattttctc 17183238

                                   
Query: 336      tcctgccttccttaggaga 354
                |||||||||| ||||||||
Sbjct: 17183239 tcctgccttctttaggaga 17183257



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 85/97 (87%)
 Strand = Plus / Plus

                                                                            
Query: 431      cctggtgatcttttggatcaatccgtgtaactttcttaaaggtctctatggctttgtcat 490
                |||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 17184826 cctgatgatcttttggatcaatccgggtaaccttcttgaaggtttctatagctttgtcat 17184885

                                                     
Query: 491      tctcacccaaatttgaatagatgttcccaatagcctt 527
                |||||||  | |||| ||| |||| ||||||||||||
Sbjct: 17184886 tctcacctgactttgcatatatgtgcccaatagcctt 17184922



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                            
Query: 362      ctgtctttaagtattccatggcagcagcccaatcagattctaccaacaattcaccaagtt 421
                |||| |||||||||||||| |||| |||||||||||||| |||||| |||||||| || |
Sbjct: 17183473 ctgtttttaagtattccatagcagtagcccaatcagattgtaccaataattcacctagct 17183532

                             
Query: 422      caacaaatgcctg 434
                | | |||||||||
Sbjct: 17183533 ccataaatgcctg 17183545



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 51/59 (86%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                           
Query: 631      aatggcaacacaaagtcttgcggtttattgaccttctttgacagatgctatataatacc 689
                ||||||||||||||||| || || ||| |||  ||| ||||||||||| ||||||||||
Sbjct: 17186276 aatggcaacacaaagtcctgtggcttactgat-ttcattgacagatgccatataatacc 17186333
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>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0571D04
          Length = 149302

 Score =  188 bits (95), Expect = 2e-44
 Identities = 217/257 (84%), Gaps = 3/257 (1%)
 Strand = Plus / Plus

                                                                          
Query: 15     cttgaaaataatgagacggtaaaggtggctggctttcacagtatcatgaagctcttccaa 74
              ||||||||||||||| ||||||| | | |||||||||||||||||||| |||||||| ||
Sbjct: 135963 cttgaaaataatgaggcggtaaaagagactggctttcacagtatcatggagctcttcaaa 136022

                                                                          
Query: 75     taatcttgcatagttaaacaatgtggtgactttatcgcagggtaattcaagaggtat--- 131
               ||||||||||||||||||||||| ||||| ||||| || ||||||||||||||| |   
Sbjct: 136023 caatcttgcatagttaaacaatgtagtgaccttatcccaaggtaattcaagaggtgttcc 136082

                                                                          
Query: 132    gttttcttcaagttggtgaaacaaactctgatccctgtattgcacactccagtttaccat 191
               | |||||||||||| ||||| |||||||| ||||| || || | ||||||||| |||| 
Sbjct: 136083 ctcttcttcaagttgttgaaaaaaactctggtccctatactgaatactccagttaaccac 136142

                                                                          
Query: 192    ggaactaccagcagtcccatccataattgaaacccagataccgtcccctagagcttcctt 251
              ||| |||||  || | ||||| |||||||||||||| |  || || || || ||||||||
Sbjct: 136143 ggagctacctacactgccatctataattgaaacccaaaagccatctccaagtgcttcctt 136202

                               
Query: 252    aaaactttgctcagcca 268
              ||||||||| |||||||
Sbjct: 136203 aaaactttgttcagcca 136219



 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                          
Query: 524    ccttcaaactttcacaattttcagggtgtacctccagcactttctcaaagctagctaagg 583
              |||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| |
Sbjct: 138124 cctttaaactttcacaattttctgggtgcacctccaacactttctcaaagctagctaatg 138183

                                                      
Query: 584    aacgtttgaagtcaccaaattttaattgtatttgaccaag 623
              ||| |||| ||||  |||||||||||||||| ||||||||
Sbjct: 138184 aacttttgtagtctgcaaattttaattgtatctgaccaag 138223



 Score =  101 bits (51), Expect = 3e-18
 Identities = 72/79 (91%)
 Strand = Plus / Plus

                                                                          
Query: 276    ctctgccttctcaaaataaagaagtccaattccattgagcaattcaactggtactttctc 335
              |||| |||||||||||| ||| |||||||||||||||||||||||||  |||| ||||||
Sbjct: 136305 ctctcccttctcaaaatgaagtagtccaattccattgagcaattcaatgggtattttctc 136364

                                 
Query: 336    tcctgccttccttaggaga 354
              |||||||||| ||||||||
Sbjct: 136365 tcctgccttctttaggaga 136383



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 85/97 (87%)
 Strand = Plus / Plus

                                                                          
Query: 431    cctggtgatcttttggatcaatccgtgtaactttcttaaaggtctctatggctttgtcat 490
              |||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 137952 cctgatgatcttttggatcaatccgggtaaccttcttgaaggtttctatagctttgtcat 138011

                                                   
Query: 491    tctcacccaaatttgaatagatgttcccaatagcctt 527
              |||||||  | |||| ||| |||| ||||||||||||
Sbjct: 138012 tctcacctgactttgcatatatgtgcccaatagcctt 138048



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                          
Query: 362    ctgtctttaagtattccatggcagcagcccaatcagattctaccaacaattcaccaagtt 421
              |||| |||||||||||||| |||| |||||||||||||| |||||| |||||||| || |
Sbjct: 136599 ctgtttttaagtattccatagcagtagcccaatcagattgtaccaataattcacctagct 136658

                           
Query: 422    caacaaatgcctg 434
              | | |||||||||
Sbjct: 136659 ccataaatgcctg 136671



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 51/59 (86%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                         
Query: 631    aatggcaacacaaagtcttgcggtttattgaccttctttgacagatgctatataatacc 689
              ||||||||||||||||| || || ||| |||  ||| ||||||||||| ||||||||||
Sbjct: 139402 aatggcaacacaaagtcctgtggcttactgat-ttcattgacagatgccatataatacc 139459
to top
>ref|XM_853773.1| PREDICTED: Canis familiaris similar to amyotrophic lateral
           sclerosis 2 (juvenile) chromosome region, candidate 2,
           transcript variant 5 (LOC478870), mRNA
          Length = 1268

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 328 actttctctcctgccttccttag 350
           |||||||||||||||||||||||
Sbjct: 715 actttctctcctgccttccttag 737
to top
>ref|XM_536030.2| PREDICTED: Canis familiaris similar to amyotrophic lateral sclerosis
            2 (juvenile) chromosome region, candidate 2, transcript
            variant 1 (LOC478870), mRNA
          Length = 1824

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 328  actttctctcctgccttccttag 350
            |||||||||||||||||||||||
Sbjct: 1271 actttctctcctgccttccttag 1293
to top
>emb|AL591504.5| Human DNA sequence from clone RP11-445J9 on chromosome 1 Contains a novel
              gene, complete sequence
          Length = 150599

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 209    catccataattgaaacccagat 230
              ||||||||||||||||||||||
Sbjct: 106084 catccataattgaaacccagat 106105
to top
>gb|AC102444.8| Mus musculus chromosome 1, clone RP24-196I15, complete sequence
          Length = 144463

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   cagattctaccaacaattcac 415
             |||||||||||||||||||||
Sbjct: 46870 cagattctaccaacaattcac 46890
to top
>ref|XM_958501.1| Neurospora crassa OR74A related to histone-lysine
           N-methyltransferase [MIPS] (NCU08733.1) partial mRNA
          Length = 1416

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 472 gtctctatggctttgtcattc 492
           |||||||||||||||||||||
Sbjct: 764 gtctctatggctttgtcattc 784
to top
>ref|XM_330849.1| Neurospora crassa OR74A related to histone-lysine
           N-methyltransferase [MIPS] (NCU08733.1) partial mRNA
          Length = 1416

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 472 gtctctatggctttgtcattc 492
           |||||||||||||||||||||
Sbjct: 764 gtctctatggctttgtcattc 784
to top
>gb|AC158964.4| Mus musculus chromosome 1, clone RP23-376B19, complete sequence
          Length = 205656

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 395   cagattctaccaacaattcac 415
             |||||||||||||||||||||
Sbjct: 89697 cagattctaccaacaattcac 89677
to top
>gb|AC132580.2| Mus musculus BAC clone RP24-388H18 from chromosome 9, complete sequence
          Length = 127200

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 278   ctgccttctcaaaataaagaa 298
             |||||||||||||||||||||
Sbjct: 55311 ctgccttctcaaaataaagaa 55291
to top
>gb|AC166078.2| Mus musculus BAC clone RP23-13G1 from chromosome 9, complete sequence
          Length = 225128

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 278    ctgccttctcaaaataaagaa 298
              |||||||||||||||||||||
Sbjct: 173621 ctgccttctcaaaataaagaa 173601
to top
>emb|BX842595.1| Neurospora crassa DNA linkage group II BAC clone B24N4
          Length = 64258

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 472 gtctctatggctttgtcattc 492
           |||||||||||||||||||||
Sbjct: 180 gtctctatggctttgtcattc 200
to top
>emb|AL513409.1|NCB11O9 Neurospora crassa DNA linkage group II BAC clone B11O9
          Length = 71085

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 472   gtctctatggctttgtcattc 492
             |||||||||||||||||||||
Sbjct: 30005 gtctctatggctttgtcattc 29985
to top
>ref|NM_001027898.1| Caenorhabditis elegans C47A4.2b (C47A4.2) mRNA, complete cds
          Length = 1380

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 293 aaagaagtccaattccattgagcaa 317
           |||||| ||||||||||||||||||
Sbjct: 217 aaagaactccaattccattgagcaa 193
to top
>ref|NM_001027897.1| Caenorhabditis elegans C47A4.2a (C47A4.2) mRNA, complete cds
          Length = 1489

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 293 aaagaagtccaattccattgagcaa 317
           |||||| ||||||||||||||||||
Sbjct: 216 aaagaactccaattccattgagcaa 192
to top
>emb|Z82263.1|CEC47A4 Caenorhabditis elegans Cosmid C47A4, complete sequence
          Length = 40664

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 293   aaagaagtccaattccattgagcaa 317
             |||||| ||||||||||||||||||
Sbjct: 16043 aaagaactccaattccattgagcaa 16019
to top
>gb|AC147631.3| Mus musculus BAC clone RP23-341H6 from 9, complete sequence
          Length = 169769

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 278   ctgccttctcaaaataaagaa 298
             |||||||||||||||||||||
Sbjct: 14585 ctgccttctcaaaataaagaa 14565
to top
>gb|AC148089.8| Mus musculus chromosome 8, clone RP24-366L10, complete sequence
          Length = 178426

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 656    tattgaccttctttgacagatgct 679
              |||||||||||||||| |||||||
Sbjct: 151135 tattgaccttctttgatagatgct 151158
to top
>gb|AC130673.10| Mus musculus chromosome 15, clone RP24-97F15, complete sequence
          Length = 136395

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 587    gtttgaagtcaccaaatttt 606
              ||||||||||||||||||||
Sbjct: 110299 gtttgaagtcaccaaatttt 110318
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>ref|XM_427077.1| PREDICTED: Gallus gallus LOC429520 (LOC429520), partial mRNA
          Length = 1865

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  aaagaagtccaattccattg 312
            ||||||||||||||||||||
Sbjct: 1478 aaagaagtccaattccattg 1497
to top
>ref|XM_425418.1| PREDICTED: Gallus gallus similar to leucine-rich repeat kinase 1
            (LOC427844), partial mRNA
          Length = 4825

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  aaagaagtccaattccattg 312
            ||||||||||||||||||||
Sbjct: 1285 aaagaagtccaattccattg 1304
to top
>gb|AC168205.7| Mus musculus chromosome 8, clone RP23-478P10, complete sequence
          Length = 174995

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 656    tattgaccttctttgacagatgct 679
              |||||||||||||||| |||||||
Sbjct: 106257 tattgaccttctttgatagatgct 106234
to top
>gb|AC147144.2| Pan troglodytes BAC clone CH251-278J22 from Y, complete sequence
          Length = 178957

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 513    gttcccaatagccttcaaactttc 536
              ||||||||||||||| ||||||||
Sbjct: 103275 gttcccaatagccttgaaactttc 103298
to top
>emb|CT027995.2| Wallaby DNA sequence from clone MEKBa-583L10, complete sequence
          Length = 35123

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 346  cttaggagaatacatgctgtcttt 369
            ||||| ||||||||||||||||||
Sbjct: 7978 cttagaagaatacatgctgtcttt 7955
to top
>gb|BC014723.1| Mus musculus phosphodiesterase 6G, cGMP-specific, rod, gamma, mRNA
           (cDNA clone MGC:25416 IMAGE:4511855), complete cds
          Length = 2261

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 550 tgtacctccagcactttctc 569
           ||||||||||||||||||||
Sbjct: 749 tgtacctccagcactttctc 768
to top
>gb|AC096035.6| Rattus norvegicus 4 BAC CH230-16M16 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 228433

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   ctttctctcctgccttcctt 348
             ||||||||||||||||||||
Sbjct: 38100 ctttctctcctgccttcctt 38119
to top
>emb|AL732509.4| Human DNA sequence from clone CTD-2245E12 on chromosome X Contains the 5'
              end of the PHKA2 gene for phosphorylase kinase, alpha 2
              (liver), the 3' end of the GPR64 gene for G protein-coupled
              receptor 64 and a CpG island, complete sequence
          Length = 128189

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 419    gttcaacaaatgcctggtga 438
              ||||||||||||||||||||
Sbjct: 114773 gttcaacaaatgcctggtga 114792
to top
>emb|AL356133.17| Human DNA sequence from clone RP11-337A23 on chromosome 9 Contains a
             novel gene (FLJ13657), the PLAA gene for phospholipase
             A2-activating protein (PLAP), a novel gene, the 5' end of
             capillary morphogenesis protein 1 (CMG-1, FLJ22621)(CMG1)
             and 3 CpG islands, complete sequence
          Length = 187805

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    catgaagctcttccaataat 78
             ||||||||||||||||||||
Sbjct: 54085 catgaagctcttccaataat 54104
to top
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    caattcaccaagttcaacaa 427
              ||||||||||||||||||||
Sbjct: 204207 caattcaccaagttcaacaa 204226
to top
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01,
             complete sequence
          Length = 163448

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 456   tgtaactttcttaaaggtct 475
             ||||||||||||||||||||
Sbjct: 75921 tgtaactttcttaaaggtct 75902
to top
>gb|AY988145.1| Felis catus clone FCA744 microsatellite sequence
          Length = 583

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  aaaggtggctggctttcaca 54
           ||||||||||||||||||||
Sbjct: 552 aaaggtggctggctttcaca 571
to top
>emb|BX072541.1| Mouse DNA sequence from clone RP23-189G9 on chromosome 4 Contains a
             novel gene and a aldo-keto reductase family 1 member B8
             (Akr1b8) pseudogene, complete sequence
          Length = 179699

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 654   tttattgaccttctttgacagatg 677
             ||||||||| ||||||||||||||
Sbjct: 12193 tttattgactttctttgacagatg 12216
to top
>emb|AL606965.20| Mouse DNA sequence from clone RP23-313I15 on chromosome 13 Contains a
             peptidylprolyl isomerase D (cyclophilin D) (Ppid)
             pseudogene and a sperm specific lactate dehydrogenase 3C
             (Ldh3) pseudogene, complete sequence
          Length = 190594

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   agcttccttaaaactttgct 262
             ||||||||||||||||||||
Sbjct: 82933 agcttccttaaaactttgct 82952
to top
>gb|AC134420.8| Mus musculus chromosome 15, clone RP23-478J5, complete sequence
          Length = 190455

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   gtttgaagtcaccaaatttt 606
             ||||||||||||||||||||
Sbjct: 40022 gtttgaagtcaccaaatttt 40041
to top
>dbj|BS000638.2| Pan troglodytes chromosome Y clone: PTBY-011C06, complete sequence
          Length = 86985

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 513   gttcccaatagccttcaaactttc 536
             ||||||||||||||| ||||||||
Sbjct: 25611 gttcccaatagccttgaaactttc 25634
to top
>dbj|BS000637.2| Pan troglodytes chromosome Y clone: PTBY-009K23, complete sequence
          Length = 144454

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 513    gttcccaatagccttcaaactttc 536
              ||||||||||||||| ||||||||
Sbjct: 112318 gttcccaatagccttgaaactttc 112341
to top
>dbj|BS000660.1| Pan troglodytes chromosome Y clone:PTBY-005M17, complete sequences
          Length = 93004

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 513  gttcccaatagccttcaaactttc 536
            ||||||||||||||| ||||||||
Sbjct: 8038 gttcccaatagccttgaaactttc 8061
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 513      gttcccaatagccttcaaactttc 536
                ||||||||||||||| ||||||||
Sbjct: 19544111 gttcccaatagccttgaaactttc 19544088
to top
>gb|AC182634.3| Gallus gallus BAC clone CH261-141O9 from chromosome 1, complete sequence
          Length = 187635

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    aaagaagtccaattccattg 312
              ||||||||||||||||||||
Sbjct: 167493 aaagaagtccaattccattg 167512
to top
>gb|AC182764.2| Gallus gallus BAC clone CH261-140B3 from chromosome 1, complete
             sequence
          Length = 192460

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   aaagaagtccaattccattg 312
             ||||||||||||||||||||
Sbjct: 12149 aaagaagtccaattccattg 12168
to top
>gb|AC182737.1| Gasterosteus aculeatus clone VMRC26-154C03, complete sequence
          Length = 109447

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   aaaggtctctatggctttgt 487
             ||||||||||||||||||||
Sbjct: 94332 aaaggtctctatggctttgt 94313
to top
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 472   gtctctatggctttgtcatt 491
             ||||||||||||||||||||
Sbjct: 58802 gtctctatggctttgtcatt 58821
to top
>gb|AC162947.2| Mus musculus BAC clone RP23-12D16 from chromosome 8, complete sequence
          Length = 230889

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    agttggtgaaacaaactctg 161
              ||||||||||||||||||||
Sbjct: 176270 agttggtgaaacaaactctg 176289
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 456      tgtaactttcttaaaggtct 475
                ||||||||||||||||||||
Sbjct: 33864022 tgtaactttcttaaaggtct 33864003
to top
>gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome 13, complete sequence
          Length = 184868

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    agcttccttaaaactttgct 262
              ||||||||||||||||||||
Sbjct: 171919 agcttccttaaaactttgct 171900
to top
>emb|AJ326914.1|HSA326914 Homo sapiens genomic sequence surrounding NotI site, clone NL1-ZL8R
          Length = 717

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 516 cccaatagccttcaaacttt 535
           ||||||||||||||||||||
Sbjct: 454 cccaatagccttcaaacttt 435
to top
>emb|AL139022.4|CNS01DX4 Human chromosome 14 DNA sequence BAC R-840I19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 190517

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    cttcaagttggtgaaacaaa 156
              ||||||||||||||||||||
Sbjct: 135650 cttcaagttggtgaaacaaa 135631
to top
>gb|AY919674.1| Homo sapiens amyloid beta (A4) precursor protein (protease nexin-II,
              Alzheimer disease) (APP) gene, complete cds
          Length = 293960

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    ctttctctcctgccttcctt 348
              ||||||||||||||||||||
Sbjct: 202565 ctttctctcctgccttcctt 202584
to top
>dbj|AP001695.1| Homo sapiens genomic DNA, chromosome 21q, section 39/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   ctttctctcctgccttcctt 348
             ||||||||||||||||||||
Sbjct: 38039 ctttctctcctgccttcctt 38020
to top
>gb|AC134855.5| Mus musculus BAC clone RP24-301M10 from 8, complete sequence
          Length = 142427

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 142  agttggtgaaacaaactctg 161
            ||||||||||||||||||||
Sbjct: 5488 agttggtgaaacaaactctg 5507
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>gb|AC145949.3| Gallus gallus BAC clone CH261-29A22 from chromosome unknown, complete
              sequence
          Length = 172543

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    aaagaagtccaattccattg 312
              ||||||||||||||||||||
Sbjct: 166267 aaagaagtccaattccattg 166286
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>gb|AF025396.1|AF025396 Vibrio anguillarum rfb region, partial sequence
          Length = 21205

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   taaaggtggctggctttcac 53
            ||||||||||||||||||||
Sbjct: 5337 taaaggtggctggctttcac 5356
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>gb|AC152164.14| Mus musculus chromosome 8, clone RP24-118N20, complete sequence
          Length = 185586

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 656    tattgaccttctttgacagatgct 679
              |||||||||||||||| |||||||
Sbjct: 176248 tattgaccttctttgatagatgct 176225



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 656   tattgaccttctttgacagatgct 679
             |||||||||||||||| |||||||
Sbjct: 48783 tattgaccttctttgatagatgct 48760
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>emb|AL669855.20| Mouse DNA sequence from clone RP23-82I5 on chromosome 11, complete
              sequence
          Length = 207991

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 550    tgtacctccagcactttctc 569
              ||||||||||||||||||||
Sbjct: 111784 tgtacctccagcactttctc 111765
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>dbj|AP000141.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone
             B2291C14-R44F3, segment 6/10, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   ctttctctcctgccttcctt 348
             ||||||||||||||||||||
Sbjct: 76335 ctttctctcctgccttcctt 76316
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>dbj|D87675.1| Homo sapiens DNA for amyloid precursor protein, complete cds
          Length = 301692

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    ctttctctcctgccttcctt 348
              ||||||||||||||||||||
Sbjct: 206277 ctttctctcctgccttcctt 206296
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>dbj|AP001442.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:T1715,
             LL56-APP region, complete sequence
          Length = 68001

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   ctttctctcctgccttcctt 348
             ||||||||||||||||||||
Sbjct: 59463 ctttctctcctgccttcctt 59444
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>dbj|AP000089.1| Homo sapiens genomic DNA of 21q22.1, APP related, B2291C14-T1533
             region, segment 6/7
          Length = 100000

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   ctttctctcctgccttcctt 348
             ||||||||||||||||||||
Sbjct: 15321 ctttctctcctgccttcctt 15302


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,616,654
Number of Sequences: 3902068
Number of extensions: 7616654
Number of successful extensions: 140279
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139991
Number of HSP's gapped (non-prelim): 276
length of query: 690
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 667
effective length of database: 17,143,297,704
effective search space: 11434579568568
effective search space used: 11434579568568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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