ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal39k14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478106.1| Oryza sativa (japonica cultivar-group), mRNA Length = 873 Score = 244 bits (123), Expect = 3e-61 Identities = 273/323 (84%) Strand = Plus / Minus Query: 171 actacgggaggtggagcagccgatcaacagccaaatctagtgaatcaacgatcttccgca 230 |||| |||||| |||||| | ||| |||||||| |||||||||||||| ||||||| | Sbjct: 519 actaggggaggcggagcaactgattgacagccaagtctagtgaatcaacattcttccgta 460 Query: 231 tgatctttagctgcatacttaggctttccaagcctcgcatttcctcatttaacctcaggc 290 |||||||| ||||| ||||||||||| |||| |||||||||||| ||||||| || Sbjct: 459 aaatctttagttgcatggctaggctttccagacctctcatttcctcattcaacctcaagc 400 Query: 291 acgaatggatgtacttattccctctagaagacgcttcaagtgctgactcctggaggcggc 350 |||||| |||||||||||| ||| | ||||| ||||| ||||| || || |||||||||| Sbjct: 399 acgaattgatgtacttatttcctttcgaagaagcttcgagtgcggattcttggaggcggc 340 Query: 351 ctacaacttcgcccaagcactccatgttatccgctgacgtcgaggtaacattggaaagcg 410 | || || || |||| |||||||||||| ||||| ||||||||||| || |||| || | Sbjct: 339 cgacgacgtctcccaggcactccatgttctccgccgacgtcgaggtgacgttggcgaggg 280 Query: 411 tgatgcggagggaggcgaatagggaggcgtagctctcggcgatggcggcggcgtctcgct 470 || ||||||||||||||| |||||||||||||| |||| |||||||||| |||| |||| Sbjct: 279 cgacgcggagggaggcgaagagggaggcgtagctgtcggagatggcggcgacgtcccgct 220 Query: 471 ccactgcctccatcgccgccgcc 493 |||| |||||||||||||||||| Sbjct: 219 ccaccgcctccatcgccgccgcc 197
>dbj|AK108064.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-B06, full insert sequence Length = 873 Score = 244 bits (123), Expect = 3e-61 Identities = 273/323 (84%) Strand = Plus / Minus Query: 171 actacgggaggtggagcagccgatcaacagccaaatctagtgaatcaacgatcttccgca 230 |||| |||||| |||||| | ||| |||||||| |||||||||||||| ||||||| | Sbjct: 519 actaggggaggcggagcaactgattgacagccaagtctagtgaatcaacattcttccgta 460 Query: 231 tgatctttagctgcatacttaggctttccaagcctcgcatttcctcatttaacctcaggc 290 |||||||| ||||| ||||||||||| |||| |||||||||||| ||||||| || Sbjct: 459 aaatctttagttgcatggctaggctttccagacctctcatttcctcattcaacctcaagc 400 Query: 291 acgaatggatgtacttattccctctagaagacgcttcaagtgctgactcctggaggcggc 350 |||||| |||||||||||| ||| | ||||| ||||| ||||| || || |||||||||| Sbjct: 399 acgaattgatgtacttatttcctttcgaagaagcttcgagtgcggattcttggaggcggc 340 Query: 351 ctacaacttcgcccaagcactccatgttatccgctgacgtcgaggtaacattggaaagcg 410 | || || || |||| |||||||||||| ||||| ||||||||||| || |||| || | Sbjct: 339 cgacgacgtctcccaggcactccatgttctccgccgacgtcgaggtgacgttggcgaggg 280 Query: 411 tgatgcggagggaggcgaatagggaggcgtagctctcggcgatggcggcggcgtctcgct 470 || ||||||||||||||| |||||||||||||| |||| |||||||||| |||| |||| Sbjct: 279 cgacgcggagggaggcgaagagggaggcgtagctgtcggagatggcggcgacgtcccgct 220 Query: 471 ccactgcctccatcgccgccgcc 493 |||| |||||||||||||||||| Sbjct: 219 ccaccgcctccatcgccgccgcc 197
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 415 gcggagggaggcgaatagggaggcgtagctctcggcgatggcggcggcgtctcgctccac 474 ||||||||||||||| |||||||||||||| |||| |||||||||| |||| |||||||| Sbjct: 17630746 gcggagggaggcgaagagggaggcgtagctgtcggagatggcggcgacgtcccgctccac 17630687 Query: 475 tgcctccatcgccgccgcc 493 |||||||||||||||||| Sbjct: 17630686 cgcctccatcgccgccgcc 17630668 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 341 tggaggcggcctacaacttcgcccaagcactccatgttatccgctgacgtcgaggt 396 ||||||||||| || || || |||| |||||||||||| ||||| ||||||||||| Sbjct: 17630997 tggaggcggccgacgacgtctcccaggcactccatgttctccgccgacgtcgaggt 17630942 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 282 acctcaggcacgaatggatgtacttattccctctagaagacgcttcaagtgctg 335 |||||| |||||||| |||||||||||| ||| | ||||| ||||| ||||||| Sbjct: 17631425 acctcaagcacgaattgatgtacttatttcctttcgaagaagcttcgagtgctg 17631372 Score = 44.1 bits (22), Expect = 0.57 Identities = 49/58 (84%) Strand = Plus / Minus Query: 171 actacgggaggtggagcagccgatcaacagccaaatctagtgaatcaacgatcttccg 228 |||| |||||| |||||| | ||| |||||||| |||||||||||||| ||||||| Sbjct: 17631912 actaggggaggcggagcaactgattgacagccaagtctagtgaatcaacattcttccg 17631855 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 26756290 cctccatcgccgccgccgcc 26756309 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 250 taggctttccaagcctcgcatttcctcatttaacct 285 ||||||||||| |||| |||||||||||| ||||| Sbjct: 17631694 taggctttccagacctctcatttcctcattcaacct 17631659 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 gccgccgccgcctcccttgc 504 |||||||||||||||||||| Sbjct: 10031370 gccgccgccgcctcccttgc 10031389
>dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_F08 Length = 134988 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 415 gcggagggaggcgaatagggaggcgtagctctcggcgatggcggcggcgtctcgctccac 474 ||||||||||||||| |||||||||||||| |||| |||||||||| |||| |||||||| Sbjct: 34779 gcggagggaggcgaagagggaggcgtagctgtcggagatggcggcgacgtcccgctccac 34720 Query: 475 tgcctccatcgccgccgcc 493 |||||||||||||||||| Sbjct: 34719 cgcctccatcgccgccgcc 34701 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 341 tggaggcggcctacaacttcgcccaagcactccatgttatccgctgacgtcgaggt 396 ||||||||||| || || || |||| |||||||||||| ||||| ||||||||||| Sbjct: 35030 tggaggcggccgacgacgtctcccaggcactccatgttctccgccgacgtcgaggt 34975 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 282 acctcaggcacgaatggatgtacttattccctctagaagacgcttcaagtgctg 335 |||||| |||||||| |||||||||||| ||| | ||||| ||||| ||||||| Sbjct: 35458 acctcaagcacgaattgatgtacttatttcctttcgaagaagcttcgagtgctg 35405 Score = 44.1 bits (22), Expect = 0.57 Identities = 49/58 (84%) Strand = Plus / Minus Query: 171 actacgggaggtggagcagccgatcaacagccaaatctagtgaatcaacgatcttccg 228 |||| |||||| |||||| | ||| |||||||| |||||||||||||| ||||||| Sbjct: 35945 actaggggaggcggagcaactgattgacagccaagtctagtgaatcaacattcttccg 35888 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 250 taggctttccaagcctcgcatttcctcatttaacct 285 ||||||||||| |||| |||||||||||| ||||| Sbjct: 35727 taggctttccagacctctcatttcctcattcaacct 35692
>dbj|AP005479.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0045A07 Length = 174165 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 415 gcggagggaggcgaatagggaggcgtagctctcggcgatggcggcggcgtctcgctccac 474 ||||||||||||||| |||||||||||||| |||| |||||||||| |||| |||||||| Sbjct: 158695 gcggagggaggcgaagagggaggcgtagctgtcggagatggcggcgacgtcccgctccac 158636 Query: 475 tgcctccatcgccgccgcc 493 |||||||||||||||||| Sbjct: 158635 cgcctccatcgccgccgcc 158617 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 341 tggaggcggcctacaacttcgcccaagcactccatgttatccgctgacgtcgaggt 396 ||||||||||| || || || |||| |||||||||||| ||||| ||||||||||| Sbjct: 158946 tggaggcggccgacgacgtctcccaggcactccatgttctccgccgacgtcgaggt 158891 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 282 acctcaggcacgaatggatgtacttattccctctagaagacgcttcaagtgctg 335 |||||| |||||||| |||||||||||| ||| | ||||| ||||| ||||||| Sbjct: 159374 acctcaagcacgaattgatgtacttatttcctttcgaagaagcttcgagtgctg 159321 Score = 44.1 bits (22), Expect = 0.57 Identities = 49/58 (84%) Strand = Plus / Minus Query: 171 actacgggaggtggagcagccgatcaacagccaaatctagtgaatcaacgatcttccg 228 |||| |||||| |||||| | ||| |||||||| |||||||||||||| ||||||| Sbjct: 159861 actaggggaggcggagcaactgattgacagccaagtctagtgaatcaacattcttccg 159804 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 250 taggctttccaagcctcgcatttcctcatttaacct 285 ||||||||||| |||| |||||||||||| ||||| Sbjct: 159643 taggctttccagacctctcatttcctcattcaacct 159608
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 437 gcgtagctctcggcgatggcggcgg 461 ||||||||||||||||||||||||| Sbjct: 2936079 gcgtagctctcggcgatggcggcgg 2936055
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 476 gcctccatcgccgccgccgcctcc 499 |||||||||||||||||||||||| Sbjct: 21072614 gcctccatcgccgccgccgcctcc 21072637 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 35316403 cctccatcgccgccgccgcc 35316384 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctcc 499 |||||||||||||||||||| Sbjct: 31693198 ccatcgccgccgccgcctcc 31693179 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctcc 499 |||||||||||||||||||| Sbjct: 11667223 ccatcgccgccgccgcctcc 11667204 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 agggaggcgtagctctcggc 450 |||||||||||||||||||| Sbjct: 419164 agggaggcgtagctctcggc 419183
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 476 gcctccatcgccgccgccgcctcc 499 |||||||||||||||||||||||| Sbjct: 40159 gcctccatcgccgccgccgcctcc 40182
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1014_G12 Length = 158830 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 476 gcctccatcgccgccgccgcctcc 499 |||||||||||||||||||||||| Sbjct: 135816 gcctccatcgccgccgccgcctcc 135839
>dbj|AB112656.1| Oryza sativa (japonica cultivar-group) OsCAX1a mRNA for cation/proton exchanger 1a, complete cds Length = 1895 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 476 gcctccatcgccgccgccgcctcc 499 |||||||||||||||||||||||| Sbjct: 227 gcctccatcgccgccgccgcctcc 204
>dbj|AK100765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119J24, full insert sequence Length = 1962 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 476 gcctccatcgccgccgccgcctcc 499 |||||||||||||||||||||||| Sbjct: 218 gcctccatcgccgccgccgcctcc 195
>ref|NM_197502.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053C23.9), mRNA Length = 456 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 480 ccatcgccgccgccgcctccctt 502 ||||||||||||||||||||||| Sbjct: 194 ccatcgccgccgccgcctccctt 216
>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07, complete sequence Length = 156163 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctccctt 502 ||||||||||||||||||||||| Sbjct: 33581 ccatcgccgccgccgcctccctt 33559
>gb|DQ470474.1| Homo sapiens scaffold attachment factor A2 mRNA, complete cds Length = 3015 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcctcc 499 ||||||||||||||||||||||| Sbjct: 200 cctccatcgccgccgccgcctcc 178
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 476 gcctccatcgccgccgccgcctc 498 ||||||||||||||||||||||| Sbjct: 8700296 gcctccatcgccgccgccgcctc 8700318 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcctccct 501 ||||| ||||||||||||||||||| Sbjct: 12346535 cctccctcgccgccgccgcctccct 12346559 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 gccgccgccgcctcccttgc 504 |||||||||||||||||||| Sbjct: 35907256 gccgccgccgcctcccttgc 35907275
>emb|Z81576.1|CER10E8 Caenorhabditis elegans Cosmid R10E8, complete sequence Length = 38472 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 32 aagtaagagttgggagaatttca 54 ||||||||||||||||||||||| Sbjct: 33806 aagtaagagttgggagaatttca 33784
>gb|BC029105.1| Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 2, mRNA (cDNA clone IMAGE:4384978), containing frame-shift errors Length = 1750 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcctcc 499 ||||||||||||||||||||||| Sbjct: 323 cctccatcgccgccgccgcctcc 301
>emb|AL513365.27| Human DNA sequence from clone RP3-476K8 on chromosome 1 Contains the LIN28 gene for lin-28 homolog (C. elegans), the DHDDS gene for dehydrodolichyl diphosphate synthase, a ribosomal protein L17 (RPL17) pseudogene, a novel gene, the HMGN2 gene for high-mobility group nucleosomal binding domain 2 and two CpG islands, complete sequence Length = 107415 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 471 ccactgcctccatcgccgccgccgcctccct 501 |||||||| ||| |||||||||||||||||| Sbjct: 41683 ccactgccgccaccgccgccgccgcctccct 41653
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 480 ccatcgccgccgccgcctccctt 502 ||||||||||||||||||||||| Sbjct: 42347 ccatcgccgccgccgcctccctt 42369
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctccctt 502 ||||||||||||||||||||||| Sbjct: 1879 ccatcgccgccgccgcctccctt 1857
>dbj|AK122942.1| Homo sapiens cDNA FLJ16651 fis, clone TESTI4036449, highly similar to Mus musculus G protein gamma 3 linked gene Length = 4001 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcctcc 499 ||||||||||||||||||||||| Sbjct: 235 cctccatcgccgccgccgcctcc 213
>ref|XM_938301.1| PREDICTED: Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 2 (HNRPUL2), mRNA Length = 5383 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcctcc 499 ||||||||||||||||||||||| Sbjct: 478 cctccatcgccgccgccgcctcc 456
>ref|XM_495877.2| PREDICTED: Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 2 (HNRPUL2), mRNA Length = 5237 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcctcc 499 ||||||||||||||||||||||| Sbjct: 332 cctccatcgccgccgccgcctcc 310
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 476 gcctccatcgccgccgccgcctc 498 ||||||||||||||||||||||| Sbjct: 43947 gcctccatcgccgccgccgcctc 43969
>ref|NM_075171.2| Caenorhabditis elegans R10E8.6 (R10E8.6) mRNA, complete cds Length = 5122 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 32 aagtaagagttgggagaatttca 54 ||||||||||||||||||||||| Sbjct: 1671 aagtaagagttgggagaatttca 1693
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctccctt 502 ||||||||||||||||||||||| Sbjct: 20124144 ccatcgccgccgccgcctccctt 20124122 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 17051527 cctccatcgccgccgccgcc 17051508
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 476 gcctccatcgccgccgccgcctc 498 ||||||||||||||||||||||| Sbjct: 27880872 gcctccatcgccgccgccgcctc 27880894 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 25565770 cctccatcgccgccgccgcc 25565789
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctccctt 502 ||||||||||||||||||||||| Sbjct: 18393744 ccatcgccgccgccgcctccctt 18393722 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 1493404 cctccatcgccgccgccgcc 1493423
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 476 gcctccatcgccgccgccgcctc 498 ||||||||||||||||||||||| Sbjct: 8698131 gcctccatcgccgccgccgcctc 8698153 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcctccct 501 ||||| ||||||||||||||||||| Sbjct: 12343298 cctccctcgccgccgccgcctccct 12343322 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 gccgccgccgcctcccttgc 504 |||||||||||||||||||| Sbjct: 35997386 gccgccgccgcctcccttgc 35997405
>ref|XM_219560.3| PREDICTED: Rattus norvegicus similar to hypothetical protein (LOC309197), mRNA Length = 3309 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcctcc 499 ||||||||||||||||||||||| Sbjct: 469 cctccatcgccgccgccgcctcc 447
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 476 gcctccatcgccgccgccgcctc 498 ||||||||||||||||||||||| Sbjct: 183381 gcctccatcgccgccgccgcctc 183403
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0003H08 Length = 142068 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 476 gcctccatcgccgccgccgcctc 498 ||||||||||||||||||||||| Sbjct: 34795 gcctccatcgccgccgccgcctc 34817
>dbj|AK107197.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-A10, full insert sequence Length = 1919 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 476 gcctccatcgccgccgccgcctc 498 ||||||||||||||||||||||| Sbjct: 24 gcctccatcgccgccgccgcctc 46
>emb|AJ334750.1|HSA334750 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CP5R Length = 675 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 471 ccactgcctccatcgccgccgccgcctccct 501 |||||||| ||| |||||||||||||||||| Sbjct: 179 ccactgccgccaccgccgccgccgcctccct 149
>dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831H9, complete sequence Length = 177433 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcctcc 499 ||||||||||||||||||||||| Sbjct: 134417 cctccatcgccgccgccgcctcc 134439
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctccctt 502 ||||||||||||||||||||||| Sbjct: 20135420 ccatcgccgccgccgcctccctt 20135398 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 17060567 cctccatcgccgccgccgcc 17060548
>emb|X13546.1|HSHMG17G Human HMG-17 gene for non-histone chromosomal protein HMG-17 Length = 7195 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 471 ccactgcctccatcgccgccgccgcctccct 501 |||||||| ||| |||||||||||||||||| Sbjct: 2557 ccactgccgccaccgccgccgccgcctccct 2587
>dbj|AP001160.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-727F15, complete sequences Length = 184802 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcctcc 499 ||||||||||||||||||||||| Sbjct: 4451 cctccatcgccgccgccgcctcc 4473
>ref|XM_963416.1| PREDICTED: Tribolium castaneum similar to CG18214-PA, isoform A (LOC656919), mRNA Length = 4836 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 476 gcctccatcgccgccgccgcctccct 501 ||||||| |||||||||||||||||| Sbjct: 735 gcctccaccgccgccgccgcctccct 710
>gb|AC148393.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0044A08 map near S6115, complete sequence Length = 158583 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 471 ccactgcctccatcgccgccgccgcctcc 499 |||||||| |||| ||||||||||||||| Sbjct: 39047 ccactgccgccatggccgccgccgcctcc 39075
>gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062O09 map near S6115, complete sequence Length = 148654 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 471 ccactgcctccatcgccgccgccgcctcc 499 |||||||| |||| ||||||||||||||| Sbjct: 132750 ccactgccgccatggccgccgccgcctcc 132778
>gb|AC068664.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-376O11, complete sequence Length = 94429 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 aaggggaaaacttctccgttgcttg 90 ||||||||||||||||| ||||||| Sbjct: 168 aaggggaaaacttctccattgcttg 192
>ref|XM_955854.1| Neurospora crassa OR74A hypothetical protein (NCU01390.1) partial mRNA Length = 975 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 600 ggggattgagcgaggaggagg 620 ||||||||||||||||||||| Sbjct: 602 ggggattgagcgaggaggagg 622
>ref|XM_326882.1| Neurospora crassa OR74A hypothetical protein (NCU01390.1) partial mRNA Length = 975 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 600 ggggattgagcgaggaggagg 620 ||||||||||||||||||||| Sbjct: 602 ggggattgagcgaggaggagg 622
>gb|AC069309.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-154D15, complete sequence Length = 174754 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 aaggggaaaacttctccgttgcttg 90 ||||||||||||||||| ||||||| Sbjct: 173116 aaggggaaaacttctccattgcttg 173140
>ref|XM_542808.2| PREDICTED: Canis familiaris similar to forkhead box L2 (LOC485688), mRNA Length = 1749 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 cgccgccgccgcctcccttgc 504 ||||||||||||||||||||| Sbjct: 970 cgccgccgccgcctcccttgc 950
>ref|XM_804006.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511865.30) partial mRNA Length = 1803 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 ctccatcgccgccgccgcctc 498 ||||||||||||||||||||| Sbjct: 1365 ctccatcgccgccgccgcctc 1345
>ref|XM_809670.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511871.70) partial mRNA Length = 1803 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 ctccatcgccgccgccgcctc 498 ||||||||||||||||||||| Sbjct: 1365 ctccatcgccgccgccgcctc 1345
>emb|BX294017.1|NCB7O17 Neurospora crassa DNA linkage group V BAC clone B7O17 Length = 26447 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 600 ggggattgagcgaggaggagg 620 ||||||||||||||||||||| Sbjct: 14371 ggggattgagcgaggaggagg 14391
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcctccct 501 ||||| ||||||||||||||||||| Sbjct: 5553 cctccctcgccgccgccgcctccct 5577
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 ctccatcgccgccgccgcctc 498 ||||||||||||||||||||| Sbjct: 3076050 ctccatcgccgccgccgcctc 3076030
>gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bin: 5.00, complete sequence Length = 50000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 cgccgccgccgcctcccttgc 504 ||||||||||||||||||||| Sbjct: 15738 cgccgccgccgcctcccttgc 15758
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 471 ccactgcctccatcgccgccgccgcctcc 499 |||||||| |||| ||||||||||||||| Sbjct: 12507085 ccactgccgccatggccgccgccgcctcc 12507057 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 tctcggcgatggcggcggcg 463 |||||||||||||||||||| Sbjct: 179870 tctcggcgatggcggcggcg 179889
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctccc 500 ||||||||||||||||||||| Sbjct: 21011924 ccatcgccgccgccgcctccc 21011904 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 gctctcggcgatggcggcggcgtc 465 |||| ||||||||||||||||||| Sbjct: 19095621 gctcgcggcgatggcggcggcgtc 19095598
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcctccct 501 ||||| ||||||||||||||||||| Sbjct: 116068 cctccctcgccgccgccgcctccct 116092
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctccc 500 ||||||||||||||||||||| Sbjct: 104013 ccatcgccgccgccgcctccc 103993
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctccc 500 ||||||||||||||||||||| Sbjct: 33224 ccatcgccgccgccgcctccc 33204
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 471 ccactgcctccatcgccgccgccgcctcc 499 |||||||| |||| ||||||||||||||| Sbjct: 12586392 ccactgccgccatggccgccgccgcctcc 12586364 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 tctcggcgatggcggcggcg 463 |||||||||||||||||||| Sbjct: 179870 tctcggcgatggcggcggcg 179889
>gb|AF051353.1| Acanthamoeba castellanii myosin IC heavy chain (MICHC) mRNA, complete cds Length = 3561 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 cgccgccgccgcctcccttg 503 |||||||||||||||||||| Sbjct: 2845 cgccgccgccgcctcccttg 2826
>gb|BC012490.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone IMAGE:3447569), with apparent retained intron Length = 671 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 37 actgcctccaccgccgccgccgcc 14
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 444 tctcggcgatggcggcggcgtctcgctc 471 |||||||||||| ||||||||| ||||| Sbjct: 1777424 tctcggcgatggtggcggcgtcgcgctc 1777397
>ref|XM_549856.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2381 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 agggaggcgtagctctcggc 450 |||||||||||||||||||| Sbjct: 334 agggaggcgtagctctcggc 315
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 aggcttcctctggcgccggg 601 |||||||||||||||||||| Sbjct: 196945 aggcttcctctggcgccggg 196964
>ref|XM_472466.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 387 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 160 cctccatcgccgccgccgcc 141
>ref|NM_183692.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 525 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 ccatcgccgccgccgcctcc 499 |||||||||||||||||||| Sbjct: 178 ccatcgccgccgccgcctcc 197
>ref|NM_190405.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 17 cctccatcgccgccgccgcc 36
>ref|NM_191277.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1293 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctcc 499 |||||||||||||||||||| Sbjct: 251 ccatcgccgccgccgcctcc 232
>ref|XM_470490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1386 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gccgccgccgcctcccttgc 504 |||||||||||||||||||| Sbjct: 357 gccgccgccgcctcccttgc 338
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 gctctcggcgatggcggcggcgtc 465 |||| ||||||||||||||||||| Sbjct: 140907 gctcgcggcgatggcggcggcgtc 140884
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 gctctcggcgatggcggcggcgtc 465 |||| ||||||||||||||||||| Sbjct: 25581 gctcgcggcgatggcggcggcgtc 25558
>gb|BC007271.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:15589 IMAGE:3160840), complete cds Length = 1479 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 849 actgcctccaccgccgccgccgcc 826
>gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 map MAP_LOC, complete sequence Length = 92340 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 acacaaggaagagcaataaagtaa 37 ||||||||||||| |||||||||| Sbjct: 88299 acacaaggaagagaaataaagtaa 88322
>gb|AC149287.1| Solanum demissum chromosome 5 clone PGEC568D21 map MAP_LOC, complete sequence Length = 119525 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 acacaaggaagagcaataaagtaa 37 ||||||||||||| |||||||||| Sbjct: 1181 acacaaggaagagaaataaagtaa 1204
>gb|BC001008.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:8694 IMAGE:2964662), complete cds Length = 1750 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1120 actgcctccaccgccgccgccgcc 1097
>gb|AY731567.1| Arachis hypogaea clone PM413 microsatellite sequence Length = 550 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 471 ccactgcctccatcgccgccgccg 494 |||||||| ||||||||||||||| Sbjct: 369 ccactgccaccatcgccgccgccg 346
>ref|XM_363937.1| Magnaporthe grisea 70-15 hypothetical protein (MG01863.4) partial mRNA Length = 1536 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 8 cctccatcgccgccgccgcc 27
>gb|BC028976.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:30185 IMAGE:4993025), complete cds Length = 1749 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1121 actgcctccaccgccgccgccgcc 1098
>gb|BC012980.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:16084 IMAGE:3617551), complete cds Length = 1751 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1120 actgcctccaccgccgccgccgcc 1097
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 ctcggcgatggcggcggcgt 464 |||||||||||||||||||| Sbjct: 675986 ctcggcgatggcggcggcgt 676005
>ref|NM_006805.3| Homo sapiens heterogeneous nuclear ribonucleoprotein A0 (HNRPA0), mRNA Length = 2983 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1121 actgcctccaccgccgccgccgcc 1098
>gb|BC030249.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:40050 IMAGE:5242912), complete cds Length = 1799 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1121 actgcctccaccgccgccgccgcc 1098
>ref|XM_533261.2| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein U (LOC476053), mRNA Length = 3318 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 547 cctccatcgccgccgccgcc 528
>ref|XM_846583.1| PREDICTED: Canis familiaris similar to leiomodin 3 (fetal) (LOC609334), mRNA Length = 1512 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 tctcggcgatggcggcggcg 463 |||||||||||||||||||| Sbjct: 955 tctcggcgatggcggcggcg 936
>ref|XM_850706.1| PREDICTED: Canis familiaris similar to tripartite motif-containing 41 isform 1, transcript variant 2 (LOC491669), mRNA Length = 1012 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 ccatcgccgccgccgcctcc 499 |||||||||||||||||||| Sbjct: 712 ccatcgccgccgccgcctcc 731
>ref|XM_548790.2| PREDICTED: Canis familiaris similar to tripartite motif-containing 41 isform 1, transcript variant 1 (LOC491669), mRNA Length = 1890 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 ccatcgccgccgccgcctcc 499 |||||||||||||||||||| Sbjct: 1590 ccatcgccgccgccgcctcc 1609
>gb|AC122485.3| Mus musculus BAC clone RP24-377J10 from chromosome 3, complete sequence Length = 157739 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 ttgattgcctcttcaaatgc 136 |||||||||||||||||||| Sbjct: 65609 ttgattgcctcttcaaatgc 65628
>gb|AC164313.3| Mus musculus BAC clone RP23-24F12 from chromosome 3, complete sequence Length = 196368 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aagagttgggagaatttcat 55 |||||||||||||||||||| Sbjct: 65374 aagagttgggagaatttcat 65355
>gb|AY957398.1| Sorghum bicolor RAMOSA1 C2H2 zinc-finger transcription factor (ramosa1) gene, complete cds Length = 6017 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 gcctccatcgccgccgccgc 495 |||||||||||||||||||| Sbjct: 3668 gcctccatcgccgccgccgc 3649
>gb|BT009752.1| Synthetic construct Homo sapiens heterogeneous nuclear ribonucleoprotein A0 mRNA, partial cds Length = 918 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 837 actgcctccaccgccgccgccgcc 814
>gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc0267M07, complete sequence Length = 120132 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 gcctccatcgccgccgccgc 495 |||||||||||||||||||| Sbjct: 64810 gcctccatcgccgccgccgc 64791
>ref|XM_971298.1| PREDICTED: Tribolium castaneum hypothetical protein LOC661532 (LOC661532), mRNA Length = 702 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 476 gcctccatcgccgccgccgcctcc 499 ||||||| |||||||||||||||| Sbjct: 642 gcctccaccgccgccgccgcctcc 619
>emb|CR456986.1| Homo sapiens full open reading frame cDNA clone RZPDo834D055D for gene HNRPA0, heterogeneous nuclear ribonucleoprotein A0; complete cds, incl. stopcodon Length = 918 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 837 actgcctccaccgccgccgccgcc 814
>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23, complete sequence Length = 148736 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 54528 cctccatcgccgccgccgcc 54547
>gb|AC141561.5| Mus musculus BAC clone RP23-457C15 from chromosome 3, complete sequence Length = 169547 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aagagttgggagaatttcat 55 |||||||||||||||||||| Sbjct: 20996 aagagttgggagaatttcat 20977
>emb|CR625209.1| full-length cDNA clone CS0DI083YH21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1568 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 967 actgcctccaccgccgccgccgcc 944
>emb|CR625176.1| full-length cDNA clone CS0DI013YF04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1542 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 967 actgcctccaccgccgccgccgcc 944
>emb|CR619753.1| full-length cDNA clone CS0DG001YK14 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1668 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1057 actgcctccaccgccgccgccgcc 1034
>emb|CR618572.1| full-length cDNA clone CS0DL009YG24 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1704 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1120 actgcctccaccgccgccgccgcc 1097
>emb|CR617807.1| full-length cDNA clone CS0DF032YP14 of Fetal brain of Homo sapiens (human) Length = 1366 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 778 actgcctccaccgccgccgccgcc 755
>emb|CR614845.1| full-length cDNA clone CS0DF033YM18 of Fetal brain of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1116 actgcctccaccgccgccgccgcc 1093
>emb|CR614650.1| full-length cDNA clone CS0DI060YF24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1702 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1120 actgcctccaccgccgccgccgcc 1097
>emb|CR611804.1| full-length cDNA clone CS0DA004YK20 of Neuroblastoma of Homo sapiens (human) Length = 1712 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1112 actgcctccaccgccgccgccgcc 1089
>emb|CR608808.1| full-length cDNA clone CL0BB019ZH05 of Neuroblastoma of Homo sapiens (human) Length = 895 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 323 actgcctccaccgccgccgccgcc 300
>emb|CR608582.1| full-length cDNA clone CS0DI071YA22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1541 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 968 actgcctccaccgccgccgccgcc 945
>emb|CR607296.1| full-length cDNA clone CS0DJ014YI03 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1686 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1105 actgcctccaccgccgccgccgcc 1082
>emb|CR607265.1| full-length cDNA clone CS0DA011YG20 of Neuroblastoma of Homo sapiens (human) Length = 1717 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1120 actgcctccaccgccgccgccgcc 1097
>emb|CR607192.1| full-length cDNA clone CS0DE011YN03 of Placenta of Homo sapiens (human) Length = 1692 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1098 actgcctccaccgccgccgccgcc 1075
>emb|CR605629.1| full-length cDNA clone CS0DI033YH20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1700 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1116 actgcctccaccgccgccgccgcc 1093
>emb|CR604783.1| full-length cDNA clone CS0DF005YK06 of Fetal brain of Homo sapiens (human) Length = 1715 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1116 actgcctccaccgccgccgccgcc 1093
>emb|CR599659.1| full-length cDNA clone CS0DI063YA10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1711 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1123 actgcctccaccgccgccgccgcc 1100
>emb|CR598679.1| full-length cDNA clone CS0DI081YL24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1704 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1117 actgcctccaccgccgccgccgcc 1094
>emb|CR596658.1| full-length cDNA clone CS0DE003YG02 of Placenta of Homo sapiens (human) Length = 1322 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 723 actgcctccaccgccgccgccgcc 700
>gb|AE011631.1| Xanthomonas axonopodis pv. citri str. 306, section 9 of 469 of the complete genome Length = 11483 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ggcggcctacaacttcgccc 364 |||||||||||||||||||| Sbjct: 8441 ggcggcctacaacttcgccc 8460
>emb|CR592858.1| full-length cDNA clone CS0DI070YK05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1720 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1120 actgcctccaccgccgccgccgcc 1097
>emb|CR592616.1| full-length cDNA clone CS0DC026YA04 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1698 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1120 actgcctccaccgccgccgccgcc 1097
>emb|CR592229.1| full-length cDNA clone CS0DI023YE14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1678 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1120 actgcctccaccgccgccgccgcc 1097
>gb|AE012099.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 7 of 460 of the complete genome Length = 10647 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ggcggcctacaacttcgccc 364 |||||||||||||||||||| Sbjct: 8276 ggcggcctacaacttcgccc 8295
>gb|AC106791.4| Homo sapiens chromosome 5 clone RP11-381K20, complete sequence Length = 216877 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 163476 actgcctccaccgccgccgccgcc 163453
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 140809 cctccatcgccgccgccgcc 140828
>gb|BC019271.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:3519 IMAGE:2823669), complete cds Length = 1733 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1100 actgcctccaccgccgccgccgcc 1077
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gccgccgccgcctcccttgc 504 |||||||||||||||||||| Sbjct: 53869 gccgccgccgcctcccttgc 53850
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ggcggcctacaacttcgccc 364 |||||||||||||||||||| Sbjct: 73123 ggcggcctacaacttcgccc 73142
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 20807803 cctccatcgccgccgccgcc 20807822
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 25137213 cctccatcgccgccgccgcc 25137232
>gb|U75930.2|OPU75930 Orgyia pseudotsugata multicapsid nucleopolyhedrovirus, complete genome Length = 131995 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 tcggcgatggcggcggcgtc 465 |||||||||||||||||||| Sbjct: 75337 tcggcgatggcggcggcgtc 75356
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctcc 499 |||||||||||||||||||| Sbjct: 106930 ccatcgccgccgccgcctcc 106911
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete sequence Length = 135216 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 92019 cctccatcgccgccgccgcc 92000
>gb|AE004730.1| Pseudomonas aeruginosa PAO1, section 291 of 529 of the complete genome Length = 20021 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 tcggcgatggcggcggcgtc 465 |||||||||||||||||||| Sbjct: 19420 tcggcgatggcggcggcgtc 19439
>gb|AC091759.2| Sus scrofa clone RP44-484M10, complete sequence Length = 168703 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 agtgctgactcctggaggcg 348 |||||||||||||||||||| Sbjct: 133087 agtgctgactcctggaggcg 133106
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 80264 cctccatcgccgccgccgcc 80245
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 gctctcggcgatggcggcgg 461 |||||||||||||||||||| Sbjct: 8342810 gctctcggcgatggcggcgg 8342829
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctcc 499 |||||||||||||||||||| Sbjct: 106347 ccatcgccgccgccgcctcc 106328
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 agggaggcgtagctctcggc 450 |||||||||||||||||||| Sbjct: 171002 agggaggcgtagctctcggc 171021
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 agggaggcgtagctctcggc 450 |||||||||||||||||||| Sbjct: 59365 agggaggcgtagctctcggc 59384
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctcc 499 |||||||||||||||||||| Sbjct: 6391 ccatcgccgccgccgcctcc 6372
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 84087 cctccatcgccgccgccgcc 84106
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 103147 cctccatcgccgccgccgcc 103166
>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002J01 Length = 130152 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 gccgccgccgcctcccttgc 504 |||||||||||||||||||| Sbjct: 4046 gccgccgccgcctcccttgc 4065
>dbj|AP003832.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1458_B07 Length = 99415 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 2464 cctccatcgccgccgccgcc 2483
>gb|AY892769.1| Synthetic construct Homo sapiens clone FLH024698.01L heterogeneous nuclear ribonucleoprotein A0 (HNRPA0) mRNA, partial cds Length = 918 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 837 actgcctccaccgccgccgccgcc 814
>dbj|AK121898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105F09, full insert sequence Length = 1972 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 73 cctccatcgccgccgccgcc 92
>dbj|AK120294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051A05, full insert sequence Length = 3443 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 1560 cctccatcgccgccgccgcc 1541
>dbj|AK070648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B16, full insert sequence Length = 2047 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 269 cctccatcgccgccgccgcc 250
>dbj|AK070363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F20, full insert sequence Length = 2381 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 agggaggcgtagctctcggc 450 |||||||||||||||||||| Sbjct: 334 agggaggcgtagctctcggc 315
>gb|AC149318.2| Phakopsora pachyrhizi clone JGIAFNA-101K16, complete sequence Length = 38351 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 tcgccgccgccgcctccctt 502 |||||||||||||||||||| Sbjct: 14072 tcgccgccgccgcctccctt 14091
>gb|BC011972.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:17503 IMAGE:3454140), complete cds Length = 1735 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1112 actgcctccaccgccgccgccgcc 1089
>dbj|AK058570.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E07, full insert sequence Length = 1609 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctcc 499 |||||||||||||||||||| Sbjct: 423 ccatcgccgccgccgcctcc 404
>dbj|AP003797.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1001_C01 Length = 90750 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 gccgccgccgcctcccttgc 504 |||||||||||||||||||| Sbjct: 63019 gccgccgccgcctcccttgc 63038
>dbj|D13755.1|NPORPT2 Orgyia pseudotsugata multicapsid nuclear polyhedrosis virus DNA, repetitive GC-rich region, from the SstI I fragment Length = 749 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 tcggcgatggcggcggcgtc 465 |||||||||||||||||||| Sbjct: 167 tcggcgatggcggcggcgtc 186
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 aagatttacagtacttgatt 122 |||||||||||||||||||| Sbjct: 3212875 aagatttacagtacttgatt 3212856
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 25065389 cctccatcgccgccgccgcc 25065408
>emb|AL731743.2|CNS08C7S Oryza sativa chromosome 12, . BAC OSJNBa0001B02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 93872 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 63850 cctccatcgccgccgccgcc 63831
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 tctcggcgatggcggcggcg 463 |||||||||||||||||||| Sbjct: 125123 tctcggcgatggcggcggcg 125104
>gb|BC018800.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone IMAGE:3605889) Length = 1753 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1118 actgcctccaccgccgccgccgcc 1095
>gb|BC018949.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:16754 IMAGE:4131137), complete cds Length = 1926 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1120 actgcctccaccgccgccgccgcc 1097
>gb|BC009284.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:14361 IMAGE:4299262), complete cds Length = 1052 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 893 actgcctccaccgccgccgccgcc 870
>gb|AY860423.1| Gonium pectorale albino3-like protein (ALB3-1) gene, complete cds Length = 4644 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 ctgcctccatcgccgccgcc 493 |||||||||||||||||||| Sbjct: 4142 ctgcctccatcgccgccgcc 4123
>emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chromosome 1, complete sequence Length = 217775 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tttcctcatttaacctcagg 289 |||||||||||||||||||| Sbjct: 94093 tttcctcatttaacctcagg 94112
>gb|U23803.1|HSU23803 Human heterogeneous ribonucleoprotein A0 mRNA, complete cds Length = 1714 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 1101 actgcctccaccgccgccgccgcc 1078
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 cctccatcgccgccgccgcc 496 |||||||||||||||||||| Sbjct: 87484 cctccatcgccgccgccgcc 87503
>gb|L10372.1|HUMMRNAA Human (clone CCG-A3) mRNA sequence Length = 850 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 actgcctccatcgccgccgccgcc 496 |||||||||| ||||||||||||| Sbjct: 524 actgcctccaccgccgccgccgcc 501
>gb|J02974.1|ACAMYHCIB Myosin IB heavy chain gene, complete cds Length = 6504 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 cgccgccgccgcctcccttg 503 |||||||||||||||||||| Sbjct: 5345 cgccgccgccgcctcccttg 5326
>dbj|AB071807.1| Oryza sativa (japonica cultivar-group) mRNA for transcription factor PCF7, partial cds Length = 1674 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ccatcgccgccgccgcctcc 499 |||||||||||||||||||| Sbjct: 290 ccatcgccgccgccgcctcc 271 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,603,358 Number of Sequences: 3902068 Number of extensions: 5603358 Number of successful extensions: 160774 Number of sequences better than 10.0: 163 Number of HSP's better than 10.0 without gapping: 179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 153841 Number of HSP's gapped (non-prelim): 6933 length of query: 648 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 625 effective length of database: 17,143,297,704 effective search space: 10714561065000 effective search space used: 10714561065000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
