ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal39j11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RLA2B_MAIZE (O24415) 60S acidic ribosomal protein P2B 75 9e-14
2RLA2_ALTAL (P42037) 60S acidic ribosomal protein P2 (Minor aller... 64 2e-10
3RLA2A_MAIZE (P46252) 60S acidic ribosomal protein P2A (P2) 64 2e-10
4RLA2B_ARATH (P51407) 60S acidic ribosomal protein P2-B 61 2e-09
5RLA2A_ARATH (Q9SLF7) 60S acidic ribosomal protein P2-A 61 2e-09
6RLA2_BRAFL (O01725) 60S acidic ribosomal protein P2 61 2e-09
7RLA2_PARAR (P41099) 60S acidic ribosomal protein P2 60 4e-09
8RLA4_CLAHE (P42039) 60S acidic ribosomal protein P2 (Minor aller... 56 6e-08
9RLA3_CLAHE (P42038) 60S acidic ribosomal protein P2 (Allergen Cl... 56 8e-08
10RLA2_MOUSE (P99027) 60S acidic ribosomal protein P2 55 1e-07
11RLA2_HUMAN (P05387) 60S acidic ribosomal protein P2 (NY-REN-44 a... 55 1e-07
12RLA2_BOVIN (P42899) 60S acidic ribosomal protein P2 55 1e-07
13RLA2_SCHPO (P08094) 60S acidic ribosomal protein P2-alpha (A2) (... 55 2e-07
14RLA2_PODAN (Q9C3Z5) 60S acidic ribosomal protein P2 55 2e-07
15RLA4_CANAL (Q9HFQ4) 60S acidic ribosomal protein P2-B (CaRP2B) 54 2e-07
16RLA2_RAT (P02401) 60S acidic ribosomal protein P2 54 3e-07
17RLA2_HORSE (Q6X9Z5) 60S acidic ribosomal protein P2 54 3e-07
18RLA4_SCHPO (P17478) 60S acidic ribosomal protein P2-beta (A4) 54 3e-07
19RLA2_WHEAT (P05390) 60S acidic ribosomal protein P2 (Ribosomal p... 53 5e-07
20RLA2_FUSCU (Q8TFM9) 60S acidic ribosomal protein P2 (Allergen Fu... 53 5e-07
21RLA2_DROME (P05389) 60S acidic ribosomal protein P2 (Acidic ribo... 53 6e-07
22RLA2_BRUMA (P90703) 60S acidic ribosomal protein P2 52 8e-07
23RLA4_YEAST (P02400) 60S acidic ribosomal protein P2-beta (L45) (... 52 1e-06
24RLA2_PIG (Q29315) 60S acidic ribosomal protein P2 52 1e-06
25RLA2_CRYST (O61463) 60S acidic ribosomal protein P2 50 3e-06
26RLA2_EIMTE (Q967Y9) 60S acidic ribosomal protein P2 50 5e-06
27RLA2_ASPFU (Q9UUZ6) 60S acidic ribosomal protein P2 (Allergen As... 49 7e-06
28RLA2_CAEEL (O01504) 60S acidic ribosomal protein P2 49 9e-06
29RLA2_EUPRA (Q9GPU2) 60S acidic ribosomal protein P2 48 2e-05
30RLA2_RHOGU (Q96UQ7) 60S acidic ribosomal protein P2 (Acyl carrie... 47 4e-05
31RLA2_RABIT (P19943) 60S acidic ribosomal protein P2 (Acidic phos... 47 4e-05
32RLA2_ARTSA (P02399) 60S acidic ribosomal protein P2 (EL12) 46 8e-05
33RLA2_TAESO (P50879) 60S acidic ribosomal protein P2 45 1e-04
34RLA2_BABBO (P27055) 60S acidic ribosomal protein P2 (L12EI) 44 4e-04
35RLA2_CANAL (Q9HFQ5) 60S acidic ribosomal protein P2-A (CaRP2A) 44 4e-04
36RLA2_YEAST (P05319) 60S acidic ribosomal protein P2-alpha (A2) (... 43 5e-04
37RLA2_DICDI (P22683) 60S acidic ribosomal protein P2 40 0.003
38RLA2_PLAFA (O00806) 60S acidic ribosomal protein P2 38 0.016
39RLA2_TRYBB (P51408) 60S acidic ribosomal protein P2 33 0.41
40RLA3_LEIIN (Q06382) 60S acidic ribosomal protein P2-2 33 0.41
41RLA2_LEIBR (O44010) 60S acidic ribosomal protein P2 (Acidic ribo... 33 0.41
42RLA3_TRYCR (P26795) 60S acidic ribosomal protein P2-B (P2B) 33 0.53
43RLA2_TRYCR (P23632) 60S acidic ribosomal protein P2-A (P) (P-JL5... 31 2.6
44RLA2_LEIDO (O43940) 60S acidic ribosomal protein P2 (Acidic ribo... 30 4.5
45UVRC_SYNY3 (P73580) UvrABC system protein C (Protein uvrC) (Exci... 30 5.9 
>RLA2B_MAIZE (O24415) 60S acidic ribosomal protein P2B|
          Length = 113

 Score = 75.5 bits (184), Expect = 9e-14
 Identities = 47/113 (41%), Positives = 53/113 (46%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK+IAAYLLA LGGN+SPTA D+K+ILESVG                 KDITEVIAAGRE
Sbjct: 1   MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRE 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           +                                         SD+DMGFSLFD
Sbjct: 61  RLSSVPSGGGAIDMGAPAAVAGGGAAPAEEAKKEEKVEEKEESDEDMGFSLFD 113
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>RLA2_ALTAL (P42037) 60S acidic ribosomal protein P2 (Minor allergen Alt a 5)|
           (Alt a 6) (Alt a VI)
          Length = 113

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 39/113 (34%), Positives = 47/113 (41%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYLL  LGGN+SP+A D+K +LESVG                 KDI E+IA+G E
Sbjct: 1   MKHLAAYLLLGLGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSE 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SD+DMGF LFD
Sbjct: 61  KLASVPSGGAGGAAASGGAAAAGGSAQAEAAPEAAKEEEKEESDEDMGFGLFD 113
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>RLA2A_MAIZE (P46252) 60S acidic ribosomal protein P2A (P2)|
          Length = 111

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 44/112 (39%), Positives = 49/112 (43%)
 Frame = -2

Query: 501 KMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGREK 322
           K +AAYLLA L GN+SP+A D+  ILESVG                 KDITE+IAAGREK
Sbjct: 1   KFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGREK 60

Query: 321 FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           F                                        SDDDMGFSLFD
Sbjct: 61  F-ASVPCGGGGVAVAAAAPAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 111
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>RLA2B_ARATH (P51407) 60S acidic ribosomal protein P2-B|
          Length = 115

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK++AA+LLA L G +SPT GDIK+IL SVG                 KD+ E+IAAGRE
Sbjct: 1   MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 324 KFXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                           SDDDMGFSLF+
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE 115
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>RLA2A_ARATH (Q9SLF7) 60S acidic ribosomal protein P2-A|
          Length = 115

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 41/115 (35%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK++AAYLLA L G +SPT+ DIK IL SVG                 KD+ E+IAAGRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 324 KFXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                           SDDDMGFSLF+
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115
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>RLA2_BRAFL (O01725) 60S acidic ribosomal protein P2|
          Length = 116

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 42/116 (36%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +AAYLLA LGGN++P+AGDIK IL SVG                 KDI EV+AAGR 
Sbjct: 1   MRYVAAYLLAVLGGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRG 60

Query: 324 KFX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                            SDDDMGF LFD
Sbjct: 61  KLSSMPSGGGVAAAAGGGGAAAGGGGAAPAAEEKKEEKKEESEEESDDDMGFGLFD 116
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>RLA2_PARAR (P41099) 60S acidic ribosomal protein P2|
          Length = 114

 Score = 60.1 bits (144), Expect = 4e-09
 Identities = 40/113 (35%), Positives = 51/113 (45%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK+IAA+LLA LGGN+SPT  D+K+IL SVG                 KDITE+IA+GRE
Sbjct: 1   MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRE 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           +                                         SD+++GFSLFD
Sbjct: 61  RL-ASVPSGGGVAVAAAAGGGGGDAPAAAAEEPKKEEKSEEESDEELGFSLFD 112
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>RLA4_CLAHE (P42039) 60S acidic ribosomal protein P2 (Minor allergen Cla h 4)|
           (Cla h IV)
          Length = 111

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 38/113 (33%), Positives = 45/113 (39%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AA+LL  L GNSSP+A DIK +L SVG                 KDI E+I++G E
Sbjct: 1   MKYLAAFLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSE 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SDDDMGF LFD
Sbjct: 61  KL--ASVPSGGAGAASAGGAAAAGGAAEAAPEAERAEEEKEESDDDMGFGLFD 111
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>RLA3_CLAHE (P42038) 60S acidic ribosomal protein P2 (Allergen Cla h 3) (Cla h|
           III)
          Length = 111

 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 38/113 (33%), Positives = 45/113 (39%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYLL  L GNSSP+A DIK +L SVG                 KDI E+I++G +
Sbjct: 1   MKYMAAYLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSQ 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SDDDMGF LFD
Sbjct: 61  KL--ASVPSGGSGAAPSAGGAAAAGGATEAAPEAAKEEEKEESDDDMGFGLFD 111
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>RLA2_MOUSE (P99027) 60S acidic ribosomal protein P2|
          Length = 115

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 39/115 (33%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +A+YLLA LGGNSSP+A DIK IL+SVG                 K+I +VIA G  
Sbjct: 1   MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVG 60

Query: 324 KFXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                           SDDDMGF LFD
Sbjct: 61  KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
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>RLA2_HUMAN (P05387) 60S acidic ribosomal protein P2 (NY-REN-44 antigen)|
          Length = 115

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 39/115 (33%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +A+YLLA LGGNSSP+A DIK IL+SVG                 K+I +VIA G  
Sbjct: 1   MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60

Query: 324 KFXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                           SDDDMGF LFD
Sbjct: 61  KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
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>RLA2_BOVIN (P42899) 60S acidic ribosomal protein P2|
          Length = 115

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 39/115 (33%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +A+YLLA LGGNSSP+A DIK IL+SVG                 K+I +VIA G  
Sbjct: 1   MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELHGKNIEDVIAQGIG 60

Query: 324 KFXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                           SDDDMGF LFD
Sbjct: 61  KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKEEKKEESEESDDDMGFGLFD 115
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>RLA2_SCHPO (P08094) 60S acidic ribosomal protein P2-alpha (A2) (L40C) (L12EI)|
          Length = 110

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 36/113 (31%), Positives = 45/113 (39%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYLL  +GG  SP+A DI+++L +VG                 KDI E+IAAG E
Sbjct: 1   MKYLAAYLLLTVGGKDSPSASDIESVLSTVGIEAESERIETLINELNGKDIDELIAAGNE 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SD+DMGF LFD
Sbjct: 61  KL---ATVPTGGAASAAPAAAAGGAAPAAEEAAKEEAKEEEESDEDMGFGLFD 110
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>RLA2_PODAN (Q9C3Z5) 60S acidic ribosomal protein P2|
          Length = 111

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 36/113 (31%), Positives = 44/113 (38%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYLL  LGG ++P+A D+K +LESVG                 KD+ E+IA G  
Sbjct: 1   MKHLAAYLLLTLGGKATPSAADVKAVLESVGIEADSDRLDKLISELEGKDVNELIAEGSS 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SDDDMGF LFD
Sbjct: 61  KL--ASVPSGGAGGAAAAGGAAAAGGAAEAAPEEAKEEEKEESDDDMGFGLFD 111
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>RLA4_CANAL (Q9HFQ4) 60S acidic ribosomal protein P2-B (CaRP2B)|
          Length = 111

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 37/113 (32%), Positives = 43/113 (38%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYLL   GGN+SP+A DI  +LESVG                 KD+ E+IA G  
Sbjct: 1   MKYLAAYLLLVQGGNTSPSASDITALLESVGVEAEESRLQALLKDLEGKDLQELIAEGNT 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SDDDMGF LFD
Sbjct: 61  KL--ASVPSGGAAAGGASASTGAAAGGAAEAEEEKEEEAKEESDDDMGFGLFD 111
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>RLA2_RAT (P02401) 60S acidic ribosomal protein P2|
          Length = 115

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 38/115 (33%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +A+YLLA LGGNS+P+A DIK IL+SVG                 K+I +VIA G  
Sbjct: 1   MRYVASYLLAALGGNSNPSAKDIKKILDSVGIEADDERLNKVISELNGKNIEDVIAQGVG 60

Query: 324 KFXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                           SDDDMGF LFD
Sbjct: 61  KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
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>RLA2_HORSE (Q6X9Z5) 60S acidic ribosomal protein P2|
          Length = 115

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 38/115 (33%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +A+YLLA LGGN+SP+A DIK IL+SVG                 K+I +VIA G  
Sbjct: 1   MRYVASYLLAALGGNTSPSAKDIKKILDSVGIEADDDRLDKVISELNGKNIEDVIAQGIG 60

Query: 324 KFXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                           SDDDMGF LFD
Sbjct: 61  KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEERKEEKKEESEESDDDMGFGLFD 115
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>RLA4_SCHPO (P17478) 60S acidic ribosomal protein P2-beta (A4)|
          Length = 110

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 35/113 (30%), Positives = 45/113 (39%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYLL  +GG  SP+A DI+++L +VG                 K+I E+IAAG E
Sbjct: 1   MKYLAAYLLLTVGGKQSPSASDIESVLSTVGIEAEAERVESLISELNGKNIEELIAAGNE 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SD+DMGF LFD
Sbjct: 61  KL---STVPSAGAVATPAAGGAAGAEATSAAEEAKEEEAAEESDEDMGFGLFD 110
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>RLA2_WHEAT (P05390) 60S acidic ribosomal protein P2 (Ribosomal protein 'A')|
           (Fragment)
          Length = 42

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVG 412
           MK+IAAYLLAYLGGNSSP+A D+K+IL +VG
Sbjct: 1   MKLIAAYLLAYLGGNSSPSAADVKDILNAVG 31
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>RLA2_FUSCU (Q8TFM9) 60S acidic ribosomal protein P2 (Allergen Fus c 1)|
          Length = 109

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 37/113 (32%), Positives = 45/113 (39%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYLL  LGGN+SP+A D+K +L SVG                 KDI ++IA G E
Sbjct: 1   MKHLAAYLLLGLGGNTSPSAADVKAVLTSVGIDADEDRLNKLISELEGKDIQQLIAEGSE 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SD+DMGF LFD
Sbjct: 61  KL----ASVPSGGAGGASGGAAAAGGAAEEAKEEEKEEEKEESDEDMGFGLFD 109
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>RLA2_DROME (P05389) 60S acidic ribosomal protein P2 (Acidic ribosomal protein|
           RPA1)
          Length = 113

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 33/113 (29%), Positives = 41/113 (36%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +AAYLLA LGG  SP   D++ IL SVG                 K I ++I  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                          DDDMGF+LF+
Sbjct: 61  KLSSMPVGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
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>RLA2_BRUMA (P90703) 60S acidic ribosomal protein P2|
          Length = 114

 Score = 52.4 bits (124), Expect = 8e-07
 Identities = 35/113 (30%), Positives = 43/113 (38%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYLL+ + GN SP+A DI+++L SVG                 K I EVI AG  
Sbjct: 2   MKYLAAYLLSTMSGNKSPSAKDIEDVLGSVGLDVDMEDANKVVSALSGKSIDEVITAGLA 61

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SD+DMGF LFD
Sbjct: 62  KVSSVPSDAAVSAIAPVVSATPTDALQAGSKKGETKEGPKEESDEDMGFGLFD 114
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>RLA4_YEAST (P02400) 60S acidic ribosomal protein P2-beta (L45) (YL44C) (YPA1)|
           (L12EIA)
          Length = 110

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 35/114 (30%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGX-XXXXXXXXXXXXXXXXKDITEVIAAGR 328
           MK +AAYLL   GGN++P+A DIK ++ESVG                    + E+IA G+
Sbjct: 1   MKYLAAYLLLVQGGNAAPSAADIKAVVESVGAEVDEARINELLSSLEGKGSLEEIIAEGQ 60

Query: 327 EKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           +KF                                        SDDDMGF LFD
Sbjct: 61  KKF----ATVPTGGASSAAAGAAGAAAGGDAAEEEKEEEAKEESDDDMGFGLFD 110
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>RLA2_PIG (Q29315) 60S acidic ribosomal protein P2|
          Length = 115

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 40/115 (34%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +A+YLLA LGGN+SP+A DIK  L+SVG                 K+I +VIA G  
Sbjct: 1   MRYVASYLLAALGGNTSPSAKDIKKXLDSVGIEADXDRLNKVISELNGKNIEDVIAQGIG 60

Query: 324 KFXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                           SDDDMGF LFD
Sbjct: 61  KLASVPSGGAXAVAAAPGSXAPAAGSAPAAAEEKKEEKKEESEESDDDMGFGLFD 115
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>RLA2_CRYST (O61463) 60S acidic ribosomal protein P2|
          Length = 110

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 35/113 (30%), Positives = 44/113 (38%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +AAY+LA LGGN  P+  D+K IL+SVG                 K++ EVIA G +
Sbjct: 1   MRYVAAYMLATLGGNEKPSESDLKKILDSVGIEVEKDQLTKVINELKGKNLDEVIAEGEK 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SDDDMGF LFD
Sbjct: 61  KL---ASVPSGGGVAAAAPAAGGGGADPAEAKEEKKEEPEEESDDDMGFGLFD 110
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>RLA2_EIMTE (Q967Y9) 60S acidic ribosomal protein P2|
          Length = 114

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 34/114 (29%), Positives = 41/114 (35%), Gaps = 1/114 (0%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYL+  LGGN +PTA D+  +LE VG                 K   EVI+AG E
Sbjct: 1   MKYVAAYLMTVLGGNEAPTAADVSRVLEPVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDD-DMGFSLFD 166
           K                                          +D DMG SLFD
Sbjct: 61  KLQKVPCGGGAAAAAPAAAAAAGGGDSSSAAKETKKEEPEEEEEDGDMGLSLFD 114
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>RLA2_ASPFU (Q9UUZ6) 60S acidic ribosomal protein P2 (Allergen Asp f 8) (AfP2)|
          Length = 111

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 34/113 (30%), Positives = 43/113 (38%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYLL  L GN+SP++ D+K +L SVG                 KD+ E+IA G  
Sbjct: 1   MKHLAAYLLLALAGNTSPSSEDVKAVLSSVGIDADEERLNKLIAELEGKDLQELIAEGST 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SD+DMGF LFD
Sbjct: 61  KL--ASVPSGGAAAAAPAAAGAAAGGAAAPAAEEKKEEEKEESDEDMGFGLFD 111
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>RLA2_CAEEL (O01504) 60S acidic ribosomal protein P2|
          Length = 107

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 36/113 (31%), Positives = 44/113 (38%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK + AYLLA LGGN+SP+A D+  +LE+ G                 K I+EVIA G+ 
Sbjct: 1   MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SDDDMGF LFD
Sbjct: 61  KL------SSVPSGGSAPAAAAPSGGAAPKAEEKKKEEPKEESDDDMGFGLFD 107
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>RLA2_EUPRA (Q9GPU2) 60S acidic ribosomal protein P2|
          Length = 113

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 27/61 (44%), Positives = 33/61 (54%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK IAAY L  LGGNSSP+A D+K +L+SVG                 K + E+I AG  
Sbjct: 1   MKYIAAYALLVLGGNSSPSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSS 60

Query: 324 K 322
           K
Sbjct: 61  K 61
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>RLA2_RHOGU (Q96UQ7) 60S acidic ribosomal protein P2 (Acyl carrier protein)|
          Length = 110

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 33/113 (29%), Positives = 41/113 (36%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYLL    GN+SP+A D+K +L +                   KD+ EVIA G +
Sbjct: 1   MKHVAAYLLLVSAGNTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSK 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SDDDMGF LFD
Sbjct: 61  KL---ASVPSGGAAPAAAAGGAAAGGAAEEKAEDKPAEKDEESDDDMGFGLFD 110
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>RLA2_RABIT (P19943) 60S acidic ribosomal protein P2 (Acidic phosphoprotein P3)|
           (Fragment)
          Length = 44

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVG 412
           M+ +A+YLLA LGGNSSP+A DIK IL+SVG
Sbjct: 1   MRYVASYLLAALGGNSSPSAKDIKKILDSVG 31
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>RLA2_ARTSA (P02399) 60S acidic ribosomal protein P2 (EL12)|
          Length = 111

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 32/113 (28%), Positives = 41/113 (36%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +AAYLLA L GN+ P+  DI+ IL SVG                 KD+  +IA G+ 
Sbjct: 1   MRYVAAYLLAALSGNADPSTADIEKILSSVGIECNPSQLQKVMNELKGKDLEALIAEGQT 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                          D+DMGF LFD
Sbjct: 61  KL--ASMPTGGAPAAAAGGAATAPAAEAKEAKKEEKKEESEEEDEDMGFGLFD 111
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>RLA2_TAESO (P50879) 60S acidic ribosomal protein P2|
          Length = 121

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 25/61 (40%), Positives = 32/61 (52%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +AAYLLA LGG   P   DIKNIL SVG                 K++ ++I  G+E
Sbjct: 1   MRYLAAYLLAQLGGTGRPQESDIKNILSSVGVECEQERAKLGVDQLHGKNVRDLINTGKE 60

Query: 324 K 322
           K
Sbjct: 61  K 61
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>RLA2_BABBO (P27055) 60S acidic ribosomal protein P2 (L12EI)|
          Length = 112

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 30/113 (26%), Positives = 41/113 (36%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           +K +++YLLA   GN +P+  D+K IL++VG                 K + E IAAG  
Sbjct: 3   LKYVSSYLLAVAAGNENPSVDDLKKILDAVGSDVDEECLQGLVDSMSGKTVHETIAAGMT 62

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                          +DDMGFSLFD
Sbjct: 63  KL---QSMPAGGAAMPAAAAGGAPAAAEDKAEAKKPEAEPEEEEDDMGFSLFD 112
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>RLA2_CANAL (Q9HFQ5) 60S acidic ribosomal protein P2-A (CaRP2A)|
          Length = 108

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 30/113 (26%), Positives = 40/113 (35%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYLL    GN++P+A D+K +L +                   K++ E+IA G E
Sbjct: 1   MKYLAAYLLLVNAGNATPSAADVKAVLSAADIEVEEEKVEKLISESDGKNVEELIAEGNE 60

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SDDDM F LFD
Sbjct: 61  KL-----SSVPSGAPAAAAGGASAAAGGEATEEAAEEEAAEESDDDMSFGLFD 108
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>RLA2_YEAST (P05319) 60S acidic ribosomal protein P2-alpha (A2) (L44) (L12EIB)|
          Length = 106

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 35/113 (30%), Positives = 39/113 (34%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAYLL    GN+ P A  IK ILESVG                 K + E+I  G E
Sbjct: 1   MKYLAAYLLLNAAGNT-PDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNE 59

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                         SDDDMGF LFD
Sbjct: 60  KL------AAVPAAGPASAGGAAAASGDAAAEEEKEEEAAEESDDDMGFGLFD 106
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>RLA2_DICDI (P22683) 60S acidic ribosomal protein P2|
          Length = 105

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 32/112 (28%), Positives = 40/112 (35%)
 Frame = -2

Query: 501 KMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGREK 322
           K +AAYLLA L GN++  A  +  IL+SVG                 KD+  +IAAG+ K
Sbjct: 1   KYLAAYLLASLSGNAN--AASVTKILQSVGVEVDAARVESVCKELDGKDVQALIAAGKSK 58

Query: 321 FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
                                                    SDDDMG  LFD
Sbjct: 59  -----VGSVAAAAAPAAATSAAPAAAAAAPAKKVVEEKKEESDDDMGMGLFD 105
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>RLA2_PLAFA (O00806) 60S acidic ribosomal protein P2|
          Length = 112

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 15/30 (50%), Positives = 23/30 (76%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESV 415
           MK +AAYL+  LGGN +P+  ++KN+L +V
Sbjct: 3   MKYVAAYLMCVLGGNENPSTKEVKNVLGAV 32
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>RLA2_TRYBB (P51408) 60S acidic ribosomal protein P2|
          Length = 107

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 26/113 (23%), Positives = 36/113 (31%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAY L  L G + P+  D++ +L++ G                 KD   + A G+ 
Sbjct: 1   MKYLAAYALISLSGKT-PSKADVEAVLKAAGVPVDSSRVEELLSEVEGKDFDALCAEGKA 59

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                          DDDMGF LFD
Sbjct: 60  KLVGGVTAGGAAPSGGAAAHAAAASAPAAAAAEAEEED-----DDDMGFGLFD 107
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>RLA3_LEIIN (Q06382) 60S acidic ribosomal protein P2-2|
          Length = 111

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 26/112 (23%), Positives = 36/112 (32%)
 Frame = -2

Query: 501 KMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGREK 322
           K +AAY LA L   +SP+  D++ I ++V                  +D+  +IA G  K
Sbjct: 4   KYLAAYALASLS-KASPSQADVEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAK 62

Query: 321 FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
                                                     DDDMGF LFD
Sbjct: 63  MSAMPAASSGAAAGVTASAAGDAAPAAAAAKKDEPEEEA---DDDMGFGLFD 111
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>RLA2_LEIBR (O44010) 60S acidic ribosomal protein P2 (Acidic ribosomal P2 beta|
           protein) (P2B-protein)
          Length = 105

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 25/113 (22%), Positives = 35/113 (30%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +AAY L  L G + P   D++ +L++ G                 K   E++  GR 
Sbjct: 1   MQYLAAYALVALSGKT-PCKADVQAVLKAAGVAIELSRVDALFQELEGKSFDELMTEGRS 59

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                          DDDMGF LFD
Sbjct: 60  KLVGSGSAAPAAAASTAGAAVAAAADAKKEASEEEA-------DDDMGFGLFD 105
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>RLA3_TRYCR (P26795) 60S acidic ribosomal protein P2-B (P2B)|
          Length = 112

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 25/114 (21%), Positives = 36/114 (31%)
 Frame = -2

Query: 507 TMKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGR 328
           +MK +AAY LA L    +P A D++ I ++ G                 + +  ++A G 
Sbjct: 2   SMKYLAAYALASLN-KPTPGAADVEAICKACGIEVESDALSFVMESIAGRSVATLVAEGA 60

Query: 327 EKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
            K                                          DDDMGF LFD
Sbjct: 61  AKMSAVAVSAAPAAGDAAAPAAAAGGAAAPAAADAKKEEEEE--DDDMGFGLFD 112
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>RLA2_TRYCR (P23632) 60S acidic ribosomal protein P2-A (P) (P-JL5) (L12E)|
          Length = 107

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 25/113 (22%), Positives = 34/113 (30%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           MK +AAY L  L G + P+   ++ +L++ G                 KD   V   G+ 
Sbjct: 1   MKYLAAYALVGLSGGT-PSKSAVEAVLKAAGVPVDPSRVDALFAEFAGKDFDTVCTEGKS 59

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                          DDDMGF LFD
Sbjct: 60  KLVGGVTRPNAATASAPTAAAAASSGAAAPAAAAEEEE-----DDDMGFGLFD 107
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>RLA2_LEIDO (O43940) 60S acidic ribosomal protein P2 (Acidic ribosomal protein|
           1)
          Length = 105

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 24/113 (21%), Positives = 35/113 (30%)
 Frame = -2

Query: 504 MKMIAAYLLAYLGGNSSPTAGDIKNILESVGXXXXXXXXXXXXXXXXXKDITEVIAAGRE 325
           M+ +AAY L  L G + P+   ++ +L++ G                 K    ++A GR 
Sbjct: 1   MQYLAAYALVALSGKT-PSKAAVEAVLKAAGVAVDASRVDAVFQELEGKSFDALVAEGRA 59

Query: 324 KFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 166
           K                                          DDDMGF LFD
Sbjct: 60  KLVGSGSAAPAAAASTAAAAAAVVAEAKKEEPEEEA-------DDDMGFGLFD 105
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>UVRC_SYNY3 (P73580) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 626

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -3

Query: 473 TWVGTLPRLPVTSRTSWNQLGLRLMKKNLSSFLLNSRVRTSQK*LQLEGRSLPL 312
           TW  T PR+ +T +   NQ   R     + SF L   +R  Q+   L  R  PL
Sbjct: 119 TWSETYPRIFITRKRRLNQAKDRYYGPYVDSFSLRQTLRLIQRIFPLRQRRQPL 172


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,158,570
Number of Sequences: 219361
Number of extensions: 893476
Number of successful extensions: 1953
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1925
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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